UNITED STATES

SECURITIES AND EXCHANGE COMMISSION

WASHINGTON, D.C. 20549

 

FORM10-K

(Mark One)

 xANNUAL REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934

For the fiscal year ended December 31, 20122013

OR

 

 ¨TRANSITION REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934

For the transition period from                                             to                                             

Commission file number: 001-12465

CELL THERAPEUTICS, INC.

(Exact name of registrant as specified in its charter)

 

Washington 91-1533912
(State or other jurisdiction of incorporation or organization) (I.R.S. Employer Identification Number)

3101 Western Avenue, Suite 600

Seattle, WA

 98121
(Address of principal executive offices) (Zip Code)

Registrant’s telephone number, including area code:(206) 282-7100

Securities registered pursuant to Section 12(b) of the Act:

 

Title of each class

 

Name of each exchange on which registered

Common Stock, no par value The NASDAQ Stock Market LLC

Securities registered pursuant to Section 12(g) of the Act:

Preferred Stock Purchase Rights

Indicate by check mark if the registrant is a well-known seasoned issuer, as defined in Rule 405 of the Securities Act.    Yes  ¨    No  x

Indicate by check mark if the registrant is not required to file reports pursuant to Section 13 or Section 15(d) of the Act.    Yes  ¨    No  x

Indicate by check mark whether the registrant (1) has filed all reports required to be filed by Section 13 or 15(d) of the Securities Exchange Act of 1934 during the preceding 12 months (or for such shorter period that the registrant was required to file such reports), and (2) has been subject to such filing requirements for the past 90 days.    Yes  x    No  ¨

Indicate by check mark whether the registrant has submitted electronically and posted on its corporate Web site, if any, every Interactive Data File required to be submitted and posted pursuant to Rule 405 of Regulation S-T (§232.405 of this chapter) during the preceding 12 months (or for such shorter period that the registrant was required to submit and post such files).    Yes  x    No  ¨

Indicate by check mark if disclosure of delinquent filers pursuant to Item 405 ofRegulation S-K (§229.405 of this chapter) is not contained herein, and will not be contained, to the best of the registrant’s knowledge, in definitive proxy or information statements incorporated by reference in Part III of thisForm 10-K or any amendment to thisForm 10-K.  x¨

Indicate by check mark whether the registrant is a large accelerated filer, an accelerated filer, or a non-accelerated filer, or a smaller reporting company. See the definitions of “large accelerated filer,” “accelerated filer” and “smaller reporting company” in Rule 12b-2 of the Exchange Act. (Check one):

 

Large accelerated filer  ¨

  Accelerated filer  x

Non-accelerated filer  ¨ (Do not check if a smaller reporting company)

  Smaller reporting company  ¨

Indicate by check mark whether the registrant is a shell company (as defined in Rule 12b-2 of the Act).    Yes  ¨    No  x

As of June 29, 2012,28, 2013, the aggregate market value of the registrant’s common equity held by non-affiliates was $121,317,591.$106,673,063. Shares of common stock held by each executive officer and director and by each person known to the registrant who beneficially owns more than 5% of the outstanding shares of the registrant’s common stock have been excluded in that such persons may under certain circumstances be deemed to be affiliates. This determination of executive officer or affiliate status is not necessarily a conclusive determination for other purposes. The registrant has no non-voting common stock outstanding.

The number of outstanding shares of the registrant’s common stock as of February 22, 201324, 2014 was 109,810,743.149,637,666.

DOCUMENTS INCORPORATED BY REFERENCE

None.Portions of the registrant’s definitive proxy statement relating to its 2014 annual meeting of shareholders, or the 2014 Proxy Statement, are incorporated by reference into Part III of this Annual Report on Form 10-K where indicated. The 2014 Proxy Statement will be filed with the U.S. Securities and Exchange Commission within 120 days after the end of the fiscal year to which this report relates.

 

 

 


CELL THERAPEUTICS, INC.

TABLE OF CONTENTS

 

      Page 
  PART I  

ITEM 1.

  

BUSINESS

   2  

ITEM 1A.

  

RISK FACTORS

   2021  

ITEM 1B.

  

UNRESOLVED STAFF COMMENTS

   40  

ITEM 2.

  

PROPERTIES

   4140  

ITEM 3.

  

LEGAL PROCEEDINGS

   4140  

ITEM 4.

  

MINE SAFETY DISCLOSURES

   4542  
  PART II  

ITEM 5.

  

MARKET FOR REGISTRANT’S COMMON EQUITY, RELATED SHAREHOLDER MATTERS AND ISSUER PURCHASES OF EQUITY SECURITIES

   4643  

ITEM 6.

  

SELECTED FINANCIAL DATA

   4845  

ITEM 7.

  

MANAGEMENT’S DISCUSSION AND ANALYSIS OF FINANCIAL CONDITION AND RESULTS OF OPERATIONS

   5047  

ITEM 7A.

  

QUANTITATIVE AND QUALITATIVE DISCLOSURES ABOUT MARKET RISK

   60  

ITEM 8.

  

FINANCIAL STATEMENTS AND SUPPLEMENTARY DATA

   61  

ITEM 9.

  

CHANGES IN AND DISAGREEMENTS WITH ACCOUNTANTS ON ACCOUNTING AND FINANCIAL DISCLOSURE

   101104  

ITEM 9A.

  

CONTROLS AND PROCEDURES

   101104  

ITEM 9B.

  

OTHER INFORMATION

   101104  
  PART III  

ITEM 10.

  

DIRECTORS, EXECUTIVE OFFICERS AND CORPORATE GOVERNANCE

   102105  

ITEM 11.

  

EXECUTIVE COMPENSATION

   105  

ITEM 12.

  

SECURITY OWNERSHIP OF CERTAIN BENEFICIAL OWNERS AND MANAGEMENT AND RELATED SHAREHOLDER MATTERS

   131105  

ITEM 13.

  

CERTAIN RELATIONSHIPS AND RELATED TRANSACTIONS, AND DIRECTOR INDEPENDENCE

   134105  

ITEM 14.

  PRINCIPAL ACCOUNTING FEES AND SERVICES   136105  
  PART IV  

ITEM 15.

  EXHIBITS, FINANCIAL STATEMENT SCHEDULES   138106  

SIGNATURES

   147116  

CERTIFICATIONS

  


Forward Looking Statements

This Annual Report on Form 10-K and the documents incorporated by reference may contain, in addition to historical information, “forward-looking statements” within the meaning of Section 27A of the Securities Act of 1933, as amended, or the Securities Act, and Section 21E of the Securities Exchange Act of 1934, as amended, or the Exchange Act. These statements relate to our future plans, objectives, expectations, intentions and financial performance, and assumptions that underlie these statements. All statements other than statements of historical fact are “forward-looking statements” for the purposes of these provisions, including:

 

any statements regarding future operations, plans, regulatory filings or approvals;

 

any statement regarding the performance, or likely performance, or outcomes or economic benefit of any licensing or other agreement, including any agreement with Novartis International Pharmaceutical Ltd., or Novartis, or its affiliates, including whether or not such partner will elect to participate, terminate or otherwise make elections under any such agreement or whether any regulatory authorizations required to enable such agreement will be obtained;agreement;

 

any projections of cash resources, revenues, operating expenses or other financial terms;terms, and any projections of cash resources, including regarding our potential receipt of future milestone payments under any of our agreements with third parties;

 

any statements of the plans and objectives of management for future operations or programs;

 

any statements concerning proposed new products or services;

 

any statements on plans regarding proposed or potential clinical trials or new drug filing strategies or timelines;

 

any statements regarding compliance with the listing standards of The NASDAQ Stock Market, or NASDAQ;

 

any statements regarding pending or future partnerships, mergers or acquisitions; and

 

any statement regarding future economic conditions or performance, and any statement of assumption underlying any of the foregoing.

When used in this Annual Report on Form 10-K, terms such as “anticipates,” “believes,” “continue,” “could,” “estimates,” “expects,” “intends,” “may,” “plans,” “potential,” “predicts,” “should,” or “will” or the negative of those terms or other comparable terms are intended to identify such forward-looking statements. These statements involve known and unknown risks, uncertainties and other factors that may cause industry trends or actual results, level of activity, performance or achievements to be materially different from any future results, levels of activity, performance or achievements expressed or implied by these statements. Our actual results may differ significantly from the results discussed in such forward-looking statements. These factors include, but are not limited to, those listed under Part I, Item I1, “Business,” Part I, Item 1A, “Risk Factors,” Part II, Item 7, “Management’s Discussion and Analysis of Financial Condition and Results of Operations,” and elsewhere in this Annual Report on Form 10-K.

We do not intend to update any of the forward-looking statements after the date of this Annual Report on Form 10-K to conform these statements to actual results or changes in our expectations. Readers are cautioned not to place undue reliance on these forward-looking statements, which apply only as of the date of this Annual Report on Form 10-K.

You may review a copy of this Annual Report on Form 10-K, including exhibits and any schedule filed therewith, and obtain copies of such materials at prescribed rates, at the U.S. Securities and Exchange Commission’s, or the SEC, Public Reference Room at 100 F Street, N.E., Washington, D.C. 20549. You may obtain information on the operation of the Public Reference Room by calling the SEC at 1-800-SEC-0330. The SEC maintains a website (http://www.sec.gov) that contains reports, proxy and information statements and other information regarding registrants, such as Cell Therapeutics, Inc., that file electronically with the SEC.

PART I

 

Item 1.Business

Overview

We are a biopharmaceutical company focused on the acquisition, development and commercialization of less toxic and more effective ways to treat cancer. Our goal is to build a profitable company by generating income from products we develop and commercialize, either alone or with one or more potential strategic partners. We are currently concentrating our efforts on treatments that target blood-related cancers where there is an unmet medical need. We are primarily focused on commercializing PIXUVRI® (pixantrone) in the European Union, or the E.U., for multiply relapsed or refractory aggressive non-Hodgkin lymphoma, or NHL, and conducting a Phase 3 clinical trial program of pacritinib for the treatment of myelofibrosis.myelofibrosis that will support regulatory submission for approval in the United States, or the U.S., and Europe.

Our most clinically advanced compound is PIXUVRI. PIXUVRI

PIXUVRI is a novel aza-anthracenedione derivative that is structurally related to anthracyclines and anthracenediones, but does not appear to be associated with the same level of cardiotoxic effects. PIXUVRI was structurally designed so that it cannot bind iron and perpetuate oxygen radical production or form a long-lived hydroxyl metabolite—both of which are the putative mechanisms for anthracycline-induced acute and chronic cardiotoxicity.

In May 2012, the European Commission or the EC, granted conditional marketing authorization in the E.U., of PIXUVRI as a monotherapy for the treatment of adult patients with multiply relapsed or refractory aggressive NHL, a cancer caused by the abnormal proliferation of lymphocytes, which are cells that are key to the functioning of the immune system. NHL usually originates in lymph nodes and spreads through the lymphatic system. PIXUVRI is the first approved treatment in the E.U. for patients with multiply relapsed or refractory aggressive B-cell NHL.NHL who have failed two or three prior lines of therapy. This approval was based on the results from our pivotal Phase 3 clinical trial known as EXTEND or PIX301. In connection with the conditional marketing authorization, we are conducting a required to conduct a post-approval study that is intended to confirm PIXUVRI’s clinical benefit. We are currently accruing patients into a Phase 3 clinicalcommitment trial, comparingwhich compares pixantrone and rituximab with gemcitabine and rituximab in the setting of aggressive B-cell NHL.

In SeptemberDuring the fourth quarter of 2012, we began making PIXUVRI available forto healthcare providers in certain countries in the E.U. and initiated our commercial sale in partsoperations on a country-by-country basis. As of the E.U.date of this filing, PIXUVRI is currentlywas available in eight countries: Austria, Denmark, Finland, Germany, Italy, France, Netherlands, Norway, Sweden and the United Kingdom. We plan to extendKingdom, or the availability of PIXUVRI to France, Italy and Spain, as well as other European countries, in 2013.U.K. We have established a commercial operations organization, including sales, marketing and supply chain management, and reimbursement capabilities, to commercialize PIXUVRI in the E.U. PIXUVRI is not approved in the U.S. We are pursuing potential partners for commercializing PIXUVRI in additional markets within the E.U. and other markets outside the E.U. and the United States (U.S.).U.S.

In almost all European markets, pricing and availability of prescription pharmaceuticals are subject to governmental control. Decisions by governmental authorities will impact the price and market acceptance of PIXUVRI. Accordingly, any future revenues are dependent on market acceptance of PIXUVRI, the reimbursement decisions made by the governmental authorities in each country where PIXUVRI is not approvedavailable for sale and other factors. In the third quarter of 2013, PIXUVRI was granted market access in Italy and France. In December 2013, we reached agreement for funding and reimbursement with the U.S.National Association of Statutory Health Insurance Funds, or the GKV-Spitzenverband, in Germany. In February 2014, the National Institute for Health and Care Excellence, or NICE, issued final guidance recommending the prescription of PIXUVRI for as long as we make the Patient Access Scheme, or PAS, available. The PAS is a confidential pricing and access agreement with the U.K.’s Department of Health. As a result of these decisions, PIXUVRI is reimbursed under varying conditions in Italy, France, Germany and England/Wales.

Pacritinib

In May 2012, we expanded our late-stage pipeline of product candidates with the acquisition of pacritinib, an oral once-dailyinhibitor of both Janus Kinase 2, or JAK2, inhibitor thatand FMS-like tyrosine kinase, or FLT3, which demonstrated meaningful clinical benefits and good tolerability in myelofibrosis patients in Phase 2 clinical trials. Myelofibrosis is a blood-related cancer caused by the accumulation of malignant bone marrow cells that triggers

an inflammatory response, scarring the bone marrow and limiting its ability to produce red blood cells prompting the spleen and liver to take over this function. Symptoms that arise from this disease include enlargement of the spleen, anemia, extreme fatigue, itching and pain. We believe pacritinib may offer an advantage over other JAK inhibitors through effective relief of symptoms with less treatment-emergent thrombocytopenia and anemia. We initiated

In November 2013, we entered into a worldwide license agreement, or the firstBaxter Agreement, with Baxter International, Inc., or Baxter, to develop and commercialize pacritinib. Pursuant to the Baxter Agreement, we have joint commercialization rights with Baxter for pacritinib in the U.S., while Baxter has exclusive commercialization rights for all indications outside the U.S. Under the terms of the Baxter Agreement, we received a $60 million upfront payment, which included an equity investment of $30 million, and we have the potential to receive $302 million in clinical, regulatory, commercial launch and sales milestones. Additionally, if pacritinib is approved and launched, we will share U.S. profits equally and will receive royalties on net sales of pacritinib in non-U.S. markets. For additional information relating to the Baxter Agreement, see Part I, Item 1, “Business—License Agreements and Additional Milestones—Baxter”.

As part of our collaboration with Baxter, we are pursuing a broad approach to advancing pacritinib for patients with myelofibrosis by conducting two Phase 3 clinical trials: one in a broad set of patients without limitations on blood platelet counts, the PERSIST-1 trial, in myelofibrosiswhich was initiated in January 2013; and the other in patients with low platelet counts, the PERSIST-2 trial, which opened for enrollment in March 2014. In October 2013, we reached an agreement with the U.S. Food and planDrug Administration, or FDA, on a Special Protocol Assessment, or SPA, for PERSIST-2. This trial, together with PERSIST-1, is intended to initiate a second Phase 3 trialsupport registration in the second half of 2013.U.S. and the E.U.

TosedostatOther Pipeline Candidates

Our earlier stage product candidate, tosedostat, is an oral aminopeptidase inhibitor that has demonstrated significant responses in patients with acute myeloid leukemia, or AML, andAML. It is currently being evaluated in twoseveral Phase 2 trials, which are being conducted as cooperative group sponsored and investigator-sponsored trials, examining the activity of combiningor ISTs. These trials are evaluating tosedostat in combination with hypomethylating agents, (HMAs)or HMAs, in AML and myelodysplastic syndrome, or MDS, which are cancers of the blood and bone marrow. We expectanticipate that data from these signal-finding trials may be used to determine the appropriate design for a Phase 3 trial.

WeAlthough our efforts are focused on developing and commercializing treatments that target blood-related cancers, we continue to work withevaluate our other pipeline candidates targeting solid tumors includingcandidate Opaxio™ (paclitaxel poliglumex), or Opaxio, and brostallicinwhich targets solid tumors. We are evaluating this candidate through a cooperative group sponsored trials and investigator-sponsored studies.ISTs, such as the ongoing maintenance therapy trial in patients with ovarian cancer. In addition, we continue to evaluate our other drug candidate, brostallicin.

Our Strategy

Our strategy is to become a leader in the acquisition, development and commercialization of novel therapeutics for the treatment of blood-related cancers. The key elements of our strategy are to:

 

Successfully Commercialize PIXUVRI.Our most importantkey commercial objective is to continue our efforts to build a successful PIXUVRI franchise in Europe. PIXUVRI is currently available in eight countries inAustria, Denmark, Finland, Germany, Italy, France, Netherlands, Norway, Sweden and the E.U.U.K., and we planseek to extendexpand the availability to other European countriesof PIXUVRI into additional geographic markets outside the E.U. and the U.S. through potential partnerships in 2013.2014. We are currently focused on educating physicians on the unmet medical need and building brand awareness for PIXUVRI among physicians in the countries where PIXUVRI is currently available. We are also focused on achieving favorablehave achieved reimbursement decisions in the five major market European countries (France,England/Wales, France, Germany and Italy, Spain and the United Kingdom), as well aswill continue to seek reimbursement in smaller territories in Western and Northern Europe in 2013. We also seek to expand the availability of PIXUVRI into additional geographic markets in the rest of the world through one or more strategic partnerships in 2013.2014.

Develop Pacritinib in Myelofibrosis.Myelofibrosis and Additional Indications.Pacritinib has the potentialTogether with Baxter, we expect to build valuedevelop and commercialize pacritinib for us through the successful enrollment of the first ofpatients with myelofibrosis. Our development program for pacritinib includes two Phase 3 registration trials in patients with myelofibrosis, within 12-14 monthsand we expect to report topline data from the initiation of the trial in January 2013. We plan to initiate a secondfirst Phase 3 trial in the second half of 20132014. Although our efforts are focused on myelofibrosis, we are currently evaluating pacritinib in AML through an ongoing IST and anticipate patient accrualintend to take approximately one year. Data for each trial is expected to be available approximately six months after completion of enrollment.evaluate it in other blood cancers in the future.

 

Continue to Develop our Other Pipeline Programs.We believe that it is important to maintain a diverse pipeline to sustain our future growth. To accomplish this, we continue to advance the development of our other novel, clinical-stage product candidates, particularly tosedostat and Opaxio, and brostallicin through investigator-sponsoredcooperative group sponsored trials orand ISTs. Sponsoring ISTssuch trials provides us with a more economical approach for further developing our promising investigational products.

 

Enter into Strategic Product Collaborations to Generate CapitalAccelerate Development and Supplement our Internal Resources.Commercialization.We enter intointend to continue to pursue additional collaborations to broaden and accelerate clinical trial development and potential commercialization of our product candidates. Collaborations canhave the potential to generate significant non-equity based operating capital, supplement our own internal expertise and provide us with access to the marketing, sales and distribution capabilities of our collaborators in specific territories.

 

Identify and Acquire Additional Pipeline Opportunities.Our current pipeline is the result of licensing and acquiring assets that we believe to bewere initially undervalued opportunities. We plan to continue to seek out additional product candidates in an opportunistic manner.

PIXUVRIProduct and Product Development CandidatesCandidate Portfolio

The following table summarizes our development pipeline for PIXUVRI, pacritinib and our other late-stage product candidates:candidates as to which we have ongoing trials:

 

Name of Product or

Product CandidateCandidate(1)

  Indications/Intended Use Status
   

PIXUVRI

(pixantrone dimaleate)

  

Multiply relapsed or refractory aggressive NHL EXTEND pivotal

Aggressive NHL,2NHL, 2nd line > 1 relapse, combination with rituximab (PIX-R/PIX306)(PIX306) post-approval study

 

Conditional Approval-MarketedApproval- Marketed in E.U.

Phase 3 ongoing

   
Pacritinib  

Myelofibrosis, PERSIST-1, All platelet levels

Myelofibrosis, PERSIST-2, Platelet counts <£100,000/µL

Relapsed AML

 

Phase 3 ongoing

Phase 3 planning to initiate in the second half of 2013initiated(4)

Phase 2 ongoing

Tosedostat(2)

First-line AML

Relapsed/Refractory AML/MDS(3)

Phase 2 ongoing

Phase 2 ongoing

   

Opaxio*Opaxio(2)

(paclitaxel poliglumex)

  

Ovarian Cancer,cancer, first-line maintenance (3)

Newly diagnosed glioblastoma without MGMT methylation

Head and Neck Cancerneck cancer

 

Phase 3 ongoing

Phase 2 ongoing

Phase 2 ongoing

Tosedostat*First-line Acute Myeloid LeukemiaPhase 2 ongoing
Relapsed/Refractory Acute Myeloid Leukemia/Myelodysplastic SyndromePhase 2 ongoing
Brostallicin*Metastatic Triple-Negative Breast CancerPhase 2 ongoing

 

*(1)Our product candidate portfolio also includes brostallicin, a novel, synthetic, second-generation DNA minor groove binder. See Part I, Item 1, “Business—Development Candidates—Brostallicin” for additional information.
(2)We support the development of these investigational agents through investigator-sponsored studies.cooperative group sponsored trials and ISTs.
(3)These trials have completed enrollment and the patients are being followed.
(4)This trial opened for enrollment in March 2014.

Oncology Market Overview and Opportunity

Overview.    According to the American Cancer Society, or ACS, cancer is the second leading cause of death in the United States,U.S., resulting in close to 580,350 deaths annually, or more than 1,600 people per day and approximatelyday. Approximately 1.7 million new cases of cancer were expected to be diagnosed in 2013 in the United States.U.S. The most commonly used methods for treating patients with cancer are surgery, radiation and chemotherapy. Patients usually receive a combination of these treatments depending upon the type and extent of their disease.

We believe developing agents whichthat improve on the cornerstone chemotherapy classes, in addition to novel drugs designed to target biological pathways to treat specific types of cancer and cancer patients, fills a significant unmet medical need for cancer patients.

ApprovedCommercialized Product

PixuvriPIXUVRI

Overview.    

Anthracyclines are one of the most potent classes of anti-cancer agents used infirst-line treatment of aggressive NHL, leukemia and breast cancer. For these diseases, anthracycline-containing regimens can often produce long-term cancer remissions and cures. However, the currently-marketed anthracyclines can cause severe, permanent and life-threatening cardiac toxicity when administered beyond widely-recognized cumulative lifetime doses. This toxicity often prevents repeat use of anthracyclines in patients who relapse after first-line anthracycline treatment. In addition, the cardiac toxicity of anthracyclines prevents their use in combination with other drugs that can also cause cardiac toxicity. As a result, chemotherapy regimens that do not include anthracyclines are often are used for the second-line treatment of aggressive NHL, leukemia and breast cancer.

PIXUVRI is being developed in an effort to improve the activity and safety in treating cancers usually initiallyoften treated with the anthracycline family of anti-cancer agents. We believePIXUVRI is not an anthracycline and is instead a next-generation anthracyclinenovel aza-anthracenedione with unique structural and physiochemical properties. Based on its ease of administration, greater anti-tumor activity and less cardiac toxicityreduced risk of cardiotoxicity, we believe PIXUVRI could gain a significant share of the anthracycline market. We also believe that such a drug could allow repeat therapy in relapsed patients and could allow combination therapy with a broader range of chemotherapies. PIXUVRI is a novel DNA major groove binder with an aza-anthracenedione molecular structure, differentiating it from anthracycline chemotherapy agents. Similar toUnlike the anthracyclines, PIXUVRI inhibitsdoes not inhibit topo-isomerase II, but,II. Also unlike anthracyclines, rather than interacalation with DNA, PIXUVRI hydrogen bonds to and alkylates DNA, thus forming stable DNA adducts with particular specificity for CpG rich, hypermethylated sites. This results in progressive disruption of mitosis and therefore killing of rapidly dividing cells like those found in many tumors. In addition, the structural motifs on anthracycline-like agents are responsible for the generation of oxygen free radicals and the formation of toxic drug-metal complexes have also been modified in PIXUVRI to prevent iron binding and perpetuation of superoxide production, both of which are the putative mechanism of anthracycline induced acute cardiotoxicity. These novel pharmacologic differences may allow re-introduction of a single-agent chemotherapy drug with anthracycline-like potency in the treatment of patients who are otherwise at their lifetime recommended doxorubicin exposure.

PIXUVRI for the Treatment of NHL

We are specifically developing and commercializing PIXUVRI a novel aza-anthracenedione derivative, for the treatment of NHL. NHL is caused by the abnormal proliferation of lymphocytes, which are cells key to the functioning of the immune system. NHL usually originates in lymph nodes and spreads through the lymphatic system. The ACS estimated that there would be 70,13069,740 people diagnosed with NHL in the U.S. and approximately 18,94019,020 people would die from this disease in 2012.2013. In Europe, the World Health Organization’s International Agency for Research on Cancer’s 2008 GLOBOCAN database estimates that in the European UnionE.U. approximately 74,16279,312 people will be diagnosed with NHL and 31,37130,691 are estimated to die from NHL annually. NHL is the seventh most common type of cancer. NHL can be broadly classified into two main forms, each with many subtypes—aggressive NHL is a rapidly growing form of the disease that moves into advanced stages much faster than indolent NHL, which progresses more slowly.

Aggressive

There are many types and subtypes of NHL, although aggressive B-cell NHL is one of the moremost common types of NHL and accounts for about 60%50 percent of all NHL cases. After initial therapy for aggressive NHL with anthracycline-based combination therapy, one-third of patients typically develop progressive disease.diseases. Approximately half of these patients are likely to be eligible for intensive second-line treatment and stem cell transplantation, although 50%50 percent are expected not to respond. For those patients who fail to respond or relapse following second-line treatment, treatment options are limited and usually palliative only.palliative. PIXUVRI is the first treatment approved in the E.U. for treatment of patients with multiply relapsed or refractory aggressive B-cell NHL. There are no drugs approved for this indication in the United States.U.S.

Clinical Trials and Conditional Marketing Approval of PIXUVRI in the E.U.

The pivotal Phase 3 EXTEND, or PIX301, trial evaluated PIXUVRI for patients with relapsed or refractory aggressive NHL. The trial enrolled 140 patients randomized to receive either PIXUVRI or another single-agent drug currently used for the treatment of this patient population and selected by the physician. Twenty percent (20%) of patients in the trial who received pixantrone achieved a complete or unconfirmed complete response at end of treatment compared with 5.7%5.7 percent in the comparator group (p=0.021). Median progression-free survival, or PFS, in the intent-to-treat population was also greater with pixantrone than with comparators: 5.3 versus 2.6 months (p=0.005). PIXUVRI had predictable and manageable toxicities when administered at the proposed dose and schedule in heavily pre-treated patients. The most common (incidence greater than or equal to 10%)10 percent) grade 3/4 adverse events reported for PIXUVRI-treated subjects across trials were neutropenia and leukopenia. Other common adverse events (any grade) included infection, anemia, thrombocytopenia, asthenia, pyrexia and cough. Overall, the incidence of grade 3 or greater cardiac adverse events was 7%7 percent (five patients) on the PIXUVRI arm and 2%2 percent (one patient) on the comparator arm. There were an equal number of deaths due to an adverse event in both the PIXUVRI and comparator arm. The EXTEND study was published inLancet Oncology in May 2012.

In May 2012, PIXUVRI was granted conditional marketing authorization by the European Commission, or the E.C., as a monotherapy for the treatment of adult patients with multiply relapsed or refractory aggressive NHL. The E.C. granted conditional approvalmarketing authorization based on the results from the EXTEND pivotal trial. The decision authorized us to market PIXUVRI in the 27 Member States of the E.U. as well as in Iceland, Liechtenstein and Norway.

Similar to accelerated approval regulations in the U.S., conditional marketing authorizations are granted in the E.U. to medicinal products with a positive benefit/risk assessment that address unmet medical needs and whose availability would result in a significant public health benefit. A conditional marketing authorization is renewable annually. Under the provisions of the conditional marketing authorization for PIXUVRI, we are required to complete a post-marketing study by June 2015 aimed at confirming the clinical benefit previously observed.

An In this regard, our post-marketing study is an ongoing randomized, controlled Phase 3 clinical trial, known as PIX-R® or PIX306, which compares PIXUVRI-rituximab to gemcitabine-rituximab in patients who have relapsed after one to three prior regimens for aggressiveB-cell NHL and who are not eligible for autologous stem cell transplant. The PIX-R trial utilizes overall survival, or OS, as the primary endpoint of the study, with a secondary endpoint of progression free survival, or PFS. The PIX306 trial was initiated in March 2011. Planned enrollment in this study is approximately 350 patients. As a condition of approval,In December 2013, we have agreed to submit the results of the Phase 3 PIX-R study to the E.C. by June 2015. We plan to meet withgained agreement from the European regulatory authorities in 2013 in regardsMedicines Agency, or the EMA, to change the primary endpoint of the ongoing trial.PIX306 trial from overall survival to PFS. The trial is now expected to enroll approximately 220 patients versus the 350 patients previously planned. This trial is expected to complete enrollment in 2015 and is intended to support the conversion of the conditional approval for PIXUVRI in Europe to full approval and potentially support a registration application in the U.S.

Commercialization of PIXUVRI in the E.U.

In September 2012, we initiated E.U. commercialization of PIXUVRI and by the end of 2012 made PIXUVRI available to healthcare providers in eight E.U. countries, including Austria, Denmark, Finland, Germany, Netherlands, Norway, Sweden and the United Kingdom. We plan to extend the availabilityU.K. Future revenues are dependent on market acceptance of PIXUVRI, to France,the reimbursement decisions made by the governmental authorities in each country where PIXUVRI is available for sale and other factors.

In the third quarter of 2013, PIXUVRI was granted market access in Italy and SpainFrance. In December 2013, we reached agreement for funding and reimbursement with the GKV-Spitzenverband in Germany. In February 2014, NICE issued final guidance recommending the prescription of PIXUVRI for as welllong as other European countrieswe make the Patient Access Scheme, or PAS, available. The PAS is a confidential pricing and access agreement with the U.K.’s Department of Health. We have established distributors in 2013.Israel and Turkey for PIXUVRI is currently available elsewhere in the E.U. and Turkey through a named patient program in certain countries where itthe drug is not otherwise commercially available. A named patient program is a mechanism through which physicians can prescribe investigational drugs under individual country-specific guidelines for patients prior to marketing approval.

WeIn July 2012, we entered into an agreement with Quintiles Commercial Europe Limited, or Quintiles, in July 2012 under which we will interview, approve for hire, train and manage a sales force and medical science liaisons for PIXUVRI in the E.U. While the sales force would be dedicated to PIXUVRI, they are not our employees, but Quintiles employees. We believe this is a cost effective way to commercialize PIXUVRI in the E.U. We currently have also entered into a third-party logistics agreement with Movianto Nederland BVapproximately 20 sales and medical science liaisons in September 2012 to provide us with warehousing, transportation,the countries where PIXUVRI is reimbursed.

As discussed in Part I, Item 1, “Business—Manufacturing, Distribution and Associated Matters,” we utilize third parties for the manufacture, storage and distribution order processing and cash collection services forof PIXUVRI, as well as an agreement with LogixX Pharma Solutions, Ltdfor other associated supply chain requirements. Our strategy of utilizing third parties in such manner allows us to act asdirect our interim wholesaler dealers license holder while we apply for our own license.

We signed aresources to the development and commercialization of products rather than to the establishment of manufacturing supply agreement with NerPharMa, S.r.l. in July 2010 for PIXUVRI drug product manufacture for both the commercial and clinical supply of PIXUVRI drug product. In July 2010, the Italian Medicines Agency, or AIFA, the national authority responsible for drug regulation in Italy, approved the facility at NerPharMa DS, S.r.l. for the production of PIXUVRI drug substance.facilities.

Clinical Development of PIXUVRI in the United StatesU.S.

WeAlthough we are not currently pursuing regulatory approval of PIXUVRI in the U.S., butwe may evaluatereevaluate a possible resubmission strategy in the U.S. based on the data generated from the ongoing PIX306 clinical trial. In the U.S.Previously, in 2009, we began a rolling NDA submissionhad submitted to the FDA in April 2009a completed New Drug Application, or NDA, submission for PIXUVRI, and, completed the submission in June 2009. In March 2010, the FDA’s ODAC panel voted unanimously that the clinical trial data was not adequate to support approval of PIXUVRI for this patient population. In early April 2010, we receivedFDA issued a complete response letter

from the FDA regarding our NDA for PIXUVRI recommending that we design and conduct an additional trial to demonstrate the safety and efficacy of PIXUVRI and other items. We filed an appeal in December 2010 with the FDA’s Center for Drug Evaluation and Research regarding the FDA’s decision in April 2010 to not approve PIXUVRI for relapsed/refractory aggressive NHL and to ask the Office of New Drugs, or the OND, to conclude that PIX301 demonstrated efficacy.

In April 2011, the OND responded to our December 2010 appeal of the FDA’s April 2010 decision to not approve PIXUVRI for relapsed or refractory aggressive NHL. In its response, the OND indicated that after considering the data available in the appeal, it did not believe that accelerated approval of our NDA is necessarily out of reach based on a single controlled clinical trial, provided that two key matters can be resolved satisfactorily. First, the circumstances of stopping the PIX301 trial early must be resolved to assure that ongoing results assessment were not dictating the decision to stop. Second, ascertainment of the primary endpoint in the PIX301 study must be determined to have been sound and not subject to bias.

The OND also indicated that our request that the OND find that the data in our NDA demonstrate efficacy and return the NDA to the Office of Oncology Drug Products for consideration of safety and other issues was denied because the OND was not able to conclude that efficacy had been demonstrated. However, the OND also did not find that it could be concluded that PIX301 was a failed study, which warranted application of interim analysis statistical thresholds.

In June 2011, we met with the FDA’s Division of Oncology Drug Products, or DODP, in a meeting that focused on the documents we proposed to provide regarding the circumstances of stopping the enrollment of PIX301 prior to achieving the original planned patient accrual and the make-up of the new radiology expert panel, as well as our plan to address the items noted in the FDA’s complete response letter. Subsequently, a second independent radiology assessment of response and progression endpoint data from our PIX301 clinical trial of PIXUVRI was achieved with statistical significance. We believe this assessment confirmed the statistical robustness of the PIX301 efficacy data that was previously submitted by us to the FDA in our NDA for PIXUVRI.

In October 2011, we resubmitted the NDA to the FDA’s Division of Oncology Products 1, or DOP1, for accelerated approval to treat relapsed or refractory aggressive NHL in patients who failed two or more lines of prior therapy. In December 2011, the DOP1 notified us that our resubmitted NDA iswas considered a complete, Class 2 response to the FDA’s April 2010 complete response letter. The FDA set a PDUFAPrescription Drug User Fee Act goal date of April 24, 2012 for a decision on our resubmitted NDA. ODAC was scheduled to review our resubmitted NDA for PIXUVRI inIn February 2012, but we voluntarily withdrew our resubmitted NDA for PIXUVRI because after communications with the FDA, we needed additional time was required to prepare for the review of the NDA by ODAC at its February 2012 meeting. Prior to withdrawing the NDA, we requested that the FDA consider rescheduling the review of the NDA to the ODAC meeting to be held in late March. The FDA was unable to accommodate our request to reschedule, and given the PDUFA goal date, the only way to have PIXUVRI possibly considered at a later ODAC meeting was to withdraw and later resubmit the NDA. We are not currently pursuing regulatory approval of PIXUVRI in the U.S., but may evaluate a possible resubmission strategy in the U.S. based on the data generated from the ongoing PIX306 clinical trial. We had discussions with the DHP relating to a Special Protocol Assessment, or SPA, and following these discussions we determined that we would not pursue a SPA. The DHP noted that we could conduct a study utilizing PFS along with OS as co-primary endpoints which would be an acceptable design outside of the formal SPA process. At the initiation of the study, co-primary endpoints of OS and PFS were used. Subsequently, an amendment was made to the study protocol in January 2012, to make OS the sole primary endpoint, and PFS a secondary endpoint. As this study is being conducted without a SPA, regulatory acceptability will depend on the magnitude of the difference between the trial study arms as well as a risk and benefit analysis.necessary information.

Novartis International Pharmaceutical Ltd., or Novartis, has an option to negotiate a license to develop and commercialize PIXUVRI as discussed under Part I, Item 1, Business “—License Agreements and Additional Milestones — Novartis.”

Development Candidates

Pacritinib

Pacritinib is an oral once-daily, tyrosine kinase inhibitor or TKI, with dual activity against JAK2 and FMS-like tyrosine kinase 3, or FLT3. The JAK family of enzymes is a central component in signal transduction pathways, which are critical to normal blood cell growth and development as well as inflammatory cytokine expression and immune responses. Mutations in these kinases have been shown to be directly related to the development of a variety of blood relatedblood-related cancers, including myeloproliferative neoplasms, leukemia and lymphoma. Pacritinib may offer an advantage over other JAK inhibitors through effective treatment of symptoms while having less treatment-emergent thrombocytopenia and anemia than has been seen in currently approved and in-development JAK inhibitors. We acquired pacritinib in May 2012 pursuant to an agreement under which we have certain royalty and milestone payment obligations. See Part I, Item 1, “Business—License Agreements and Additional Milestone Activities” for additional information.

Pacritinib has been studied in two Phase 2 trials inwith a total of 65 myelofibrosis patients.patients, all of whom were treated with 400 mg of once-daily pacritinib. In December 2013, an integrated analysis of these two Phase 2 trials 30-74% improvement in sevenwas presented at the American Society of Hematology Annual Meeting, or ASH. During these Phase 2 trials, spleen response was assessed by physical exam and magnetic resonance imaging, or MRI, and patient-reported outcomes used the myelofibrosis symptom assessment form (MF-SAF) scores was observed relative to baseline at cycle 4, 7Myelofibrosis Symptom Assessment Form, or 10 (28 day cycles).MF-SAF. Among evaluable patients, 31%37 percent achieved 35%35 percent or greater reduction in spleen volume measured by MRI. We believe these effects appearMRI and 48 percent achieved a 50 percent or greater reduction in patient-reported symptom score up to be independenttheir last visit on treatment. Duration of patientexposure and daily dose were unaffected by baseline platelet count. Pacritinib appearscounts. This integrated safety analysis of all 65

patients showed the most common non-hematologic adverse events (occurring in 15 percent or more of patients overall) were gastrointestinal, predominantly diarrhea, and most were grade 1 or 2, regardless of baseline platelet counts. Of note, there were no thrombocytopenia-associated adverse events occurring at this frequency in either group.

In November 2013, we entered into the Baxter Agreement to be associateddevelop and commercialize pacritinib. Pursuant to the Baxter Agreement, we have joint commercialization rights with less myelosuppression thanBaxter for pacritinib in the U.S., while Baxter has exclusive commercialization rights for all indications outside the U.S. Under the terms of the Baxter Agreement, we received a $60 million upfront payment, which included an equity investment of $30 million, and we have the potential to receive $302 million in clinical, regulatory, commercial launch and sales milestones. Additionally, if pacritinib is approved and launched, we will share U.S. profits equally and receive royalties on net sales of pacritinib in markets outside of the U.S.

As part of our collaboration with Baxter, we are pursuing a broad approach to advancing pacritinib for patients with myelofibrosis by conducting two Phase 3 clinical trials: one in a broad set of patients without limitations on blood platelet counts, the PERSIST-1 trial, which was initiated in January 2013; and the other JAK2 inhibitors. in patients with low platelet counts, the PERSIST-2 trial, which opened for enrollment in March 2014.

In January 2013, we initiated the first of two plannedclinical trial sites and began enrolling patients with myelofibrosis in a Phase 3 clinical trials in patients with myelofibrosis.trial known as the PERSIST-1, or PAC325, trial. PERSIST-1 is a multicenter, open-label, randomized, controlled Phase 3 trial comparingevaluating the efficacy and safety of pacritinib with that of best available therapy in patients with primary myelofibrosis, post-polycythemia vera myelofibrosis or post-essential thrombocythemia myelofibrosis. A total of 270approximately 320 eligible patients are plannedexpected to be randomized 2:1 to receive either pacritinib 400 mg taken orally once daily or the best available therapy. The bestBest available therapy includes any physician-selected treatment other than JAK inhibitors. There will beinhibitors, and there is no exclusion by patient platelet count.

The primary endpoint will beof the PERSIST-1 trial is the percentage of patients achieving a 35%35 percent or greater reduction in spleen volume from baseline to Week 24 as measured by MRI or computed tomography, or CT, scan. The secondary endpoint is the percentage of patients achieving a 50 percent or greater reduction in Total Symptom Score, or TSS, from baseline to 24 weeks as measured by tracking specific symptoms on a form. At the time of initiation of the trial, PERSIST-1 utilized the original Myeloproliferative Neoplasm Symptom Assessment (MPN-SAF TSS) instrument, to measure TSS reduction. However, we have substantially concluded the process of amending the PERSIST-1 trial protocol to replace the original MPN-SAF TSS instrument with a new instrument, known as the MPN-SAF TSS 2.0, which is also being used for recording patient-reported outcomes for the PERSIST-2 trial detailed below. In connection with this amendment, we expect that enrollment in PERSIST-1 will be increased from 270 to approximately 320 patients. The trial is currently enrolling patients at clinical sites in Europe, Australia, New Zealand, Russia and the U.S. More details on the PERSIST-1 trial can be found at www.clinicaltrials.gov. We anticipate reporting topline data for PERSIST-1 in the second half of 2014.

In March 2014, we opened clinical trial sites for enrollment of patients with myelofibrosis in the second Phase 3 clinical trial known as the PERSIST-2, or PAC326, trial. PERSIST-2 is a multi-center, open-label randomized, controlled clinical trial evaluating pacritinib in up to 300 patients with myelofibrosis whose platelet counts are less than or equal to 100,000/µL. The trial will evaluate pacritinib as compared to best available therapy, including approved JAK2 inhibitors that are dosed according to the product label for myelofibrosis patients with thrombocytopenia. Patients will be randomized (1:1:1) to receive 200 mg pacritinib twice daily, 400 mg pacritinib once daily or best available therapy. In October 2013, CTI reached an agreement with the FDA on a SPA for the PERSIST-2 trial, regarding the planned design, endpoints and statistical analysis approach of the trial to be used in support of a potential NDA submission. Under the SPA, the agreed upon co-primary endpoints are the percentage of patients achieving a 35 percent or greater reduction in spleen volume measured by MRI or CT atscan from baseline to 24 weeks of treatment.treatment and the percentage of patients achieving a TSS reduction of 50 percent or greater using six key symptoms as measured by the modified MPN-SAF diary from baseline to 24 weeks. The trial is expected to enroll patients at clinical sites in the U.S., Canada, Europe, Australia and New Zealand. Additional trial details are available atwww.clinicaltrials.gov.

Tosedostat

Tosedostat is a selective, oral inhibitor of aminopeptidases, which are required by tumor cells to provide amino acids necessary for growth and tumor cell survival. Tosedostat has demonstrated significant anti-tumor responses in blood-related cancers and solid tumors in Phase 1 and 2 clinical trials.

In December 2011, final results from the United States.Phase 2 OPAL study of tosedostat in elderly patients with relapsed or refractory AML were presented at ASH. These results showed that once-daily, oral doses of tosedostat had predictable and manageable toxicities and demonstrated encouraging response rates, including a high response rate among patients who received prior hypomethylating agents, which are used to treat MDS, a precursor of AML.

The secondIn December 2013, interim results from an investigator-initiated Phase 32 clinical trial PERSIST-2, is currently being plannedof tosedostat in combination with cytarabine or decitabine in newly diagnosed older patients with AML or high-risk MDS were presented at ASH. The Phase 2 trial was designed to evaluate pacritinib compared to best availabletest the efficacy of tosedostat in combination with low intensity therapy including JAK inhibitors,for older patients with previously untreated AML or high-risk MDS not considered candidates for standard intensive therapy. This presentation reported on the results of 26 patients (median age was 69) enrolled in the first dose cohort. Patients were randomized for treatment with tosedostat in combination with either cytarabine or decitabine. Fourteen out of 26 (54 percent) patients in this cohort had either a complete response (CR; n=10, 39 percent) or complete response with incomplete blood count recovery (CRi; n=4, 15 percent). The percentage of complete responses was comparable between arms. Seven (50 percent) of the 14 CR/CRi were achieved in patients with myelofibrosis whose platelet countspoor-risk cytogenetic features. Importantly, 10 of the 26 patients subsequently went on to receive hematopoietic stem cell transplant. The study achieved its primary objective with 21 (82 percent) patients alive at four months. Median overall survival was encouraging at approximately 12 months for both study arms. Tosedostat combination therapy was well tolerated and predominantly administered as an outpatient therapy. The primary side effects of the combination therapy, the majority of which were associated with the cytarabine arm, included febrile neutropenia (50 percent), pulmonary infections (31 percent) and sepsis (19 percent). Clinically significant non-hematological toxicities were uncommon and predominantly low grade.

There are <100,000 / µL. This trial is expected to initiateseveral ongoing Phase 2 cooperative group sponsored trials and ISTs evaluating the activity of tosedostat in combination with standard agents in patients with AML or MDS. We anticipate that data from these signal-finding trials may inform the second half of 2013, and we expect it will have the same primary endpoint as PERSIST-1.appropriate design for a Phase 3 trial.

We acquired all right, titlehave an exclusive marketing and interest of S*BIOco-development agreement for tosedostat in North, Central and assumed certain liabilities relating to, certain intellectual propertySouth America, which is discussed in more detail in Part I, Item 1, “Business—License Agreements and other assets related to compounds SB1518 (also referred to as “pacritinib”) and SB1578, which inhibit Janus kinase 2, commonly referred to as JAK2. Under the S*BIO Agreement, we are solely responsible for development and commercialization activities of pacritinib worldwide and agreed to make regulatory success and sales-based milestone payments, as well as single-digit royalties on net sales.Additional Milestone Activities.”

Opaxio (paclitaxel(paclitaxel poliglumex)

Opaxio is our novel biologically-enhanced chemotherapeutic agent that links paclitaxel to a biodegradable polyglutamate polymer, resulting in a new chemical entity. Taxanes, including paclitaxel (Taxol®) and docetaxel (Taxotere®), are widely used for the treatment of various solid tumors, including non-small cell lung, ovarian, breast and prostate cancers. We are currently focusing our development of Opaxio through investigator-sponsored studiescooperative group trials and ISTs in the following indications: ovarian, glioblastoma multiforme, and head and neck cancers.

Opaxio was designed to deliver paclitaxel preferentially to tumor tissue. By linking paclitaxel to a biodegradable amino acid carrier, the conjugated chemotherapeutic agent is inactive in the bloodstream, sparing normal tissues the toxic side effects of chemotherapy. Once inside tumor tissue, the conjugated chemotherapeutic agent is activated and released by the action of an enzyme called cathepsin B. Opaxio remains stable in the bloodstream for several days after administration; this prolonged circulation allows the passive accumulation of Opaxio in tumor tissue.

Opaxio for ovarian cancer

We are currently focusing our development of Opaxio as a potential maintenance therapy for women with advanced stage ovarian cancer who achieve a complete remission following first-line therapy with paclitaxel and carboplatin. In March 2004, we entered into a clinical trial agreement with the Gynecologic Oncology Group, or

the GOG, to perform a Phase 3 trial, known as the GOG-0212 trial. As such, the GOG-0212 trial is conducted and managed by the GOG. We expectThe GOG-0212 study is a randomized, multicenter, open label Phase 3 trial of either monthly Opaxio or paclitaxel for up to 12 consecutive months compared to surveillance among women with advanced ovarian cancer who have no evidence of disease following first-line therapy with paclitaxel and carboplatin. For purposes of registration, the trialprimary endpoint of the study is overall survival of Opaxio compared to enroll 1,100 patients. surveillance. Secondary endpoints are PFS, safety and quality of life.

In February 2012, we were informed that the Data Monitoring Committee for GOG-0212 adopted an amendment to the study’s statistical analysis plan or SAP, to perform four interim analyses instead of thepreviously-planned single interim analysis allowing for an earlier analysis of survival results than previously noted. There are early stopping criteria for either success or futility. In January 2013, we reported that the GOGwere informed us that the Data Safety Monitoring Board (DSMB) recommended continuation of the GOG-0212 Phase 3 clinical trial of Opaxio for maintenance therapy in ovarian cancer with no changes following a planned interim survival analysis. EnrollmentIn January 2014, we were informed by the GOG that enrollment in the trial is expected to behad been completed in 2013.with 1,150 patients enrolled.

Opaxio for glioblastoma multiforme (malignant brain cancer)

In November 2010, results were presented by the Brown University Oncology Group from a Phase 2 trial of Opaxio combined with temozolomide, or TMZ, and radiotherapy in patients with newly-diagnosed, high-grade gliomas, a type of brain cancer.cancer, were presented by the Brown University Oncology Group. The trial demonstrated a high rate of complete and partial responses and an encouragingly high rate of six month PFS. Based on these results, the Brown University Oncology Group has initiated a randomized, multicenter Phase 2 studytrial of Opaxio and standard radiotherapy versus TMZ and radiotherapy for newly diagnosed patients with glioblastoma with an active gene termed MGMT that reduces responsiveness to TMZ. The primary endpoints of the trial goals are to estimate disease free and overall survival for the two study arms. Preliminary results are expected to be available in the second halfquarter of 2013.2014. In September 2012, Opaxio was granted orphan-drug designation by the FDA for the treatment of a type of brain cancer called glioblastoma multiforme.

Opaxio for head and neck cancer

AIn April 2008, SUNY Upstate Medical University initiated a Phase 1-2 studytrial of Opaxio combined with radiotherapy and cisplatin was initiated by SUNY Upstate Medical University, infor patients with locally advanced head and neck cancer. PreliminaryIn June 2013, results are expected to be presented mid-2013. from the Phase 1-2 trial showed promising clinical activity and the combination of the two agents was tolerable. An expansion cohort of HPV negative advanced head and neck cancer patients on this protocol is in progress.

We acquired an exclusive worldwide license for rights to Opaxio and certain polymer technology from PG-TXL Company, L.P., or PG-TXL, in November 1998 as discussed below in “—Part I, Item 1, “Business—License Agreements and Additional Milestone Activities—PG-TXL.”

WeBrostallicin

Brostallicin, a novel, synthetic, second-generation DNA minor groove binder, binds covalently to DNA within the DNA minor groove, interfering with DNA division and leading to tumor cell death. More than 200 patients have entered into an exclusive worldwide licensing agreement for Opaxiobeen treated with Novartis as discussed belowbrostallicin in “—License Agreementssingle-agent and Additional Milestone Activities—Novartis.”

Tosedostat

Tosedostat is an oral, aminopeptidase inhibitor that has demonstrated significant anti-tumor responses in blood related cancers and solid tumors in Phase 1-2 clinical trials.combination studies. In December 2011,June 2013, we reported on final results from thea cooperative group sponsored trial and National Cancer Institute-sponsored Phase 2 OPALclinical trial of brostallicin in combination with cisplatin for the treatment of women with metastatic triple-negative breast cancer, or mTNBC. Triple-negative breast cancer lacks progesterone and estrogen receptors and the HER2 biomarker that is present in most breast cancers, which makes standard therapy with hormone or targeted therapy

ineffective. The rationale for the present study in TNBC is based on data that demonstrates that silencing of the breast cancer susceptibility gene(s), or BRCA, is associated with substantially enhanced sensitivity to brostallicin. BRCA is silenced or mutated in most patients with TNBC. In this study of tosedostat in elderly48 patients with relapsed or refractory AMLheavily pretreated mTNBC, the 3-month PFS was 51 percent with 10 confirmed responses (one complete response and nine partial responses). Among the 25 patients who received a reduced brostallicin dose, the overall response rate was 28 percent, with 3-month PFS of 61.5 percent and median overall survival of 11.8 months. Adverse events were mostly hematologic (75 percent) and consistent with other treatments in this setting. The final data were presented at the 2013 American Society of Hematology Annualfor Clinical Oncology Meeting. These results showed that once-daily, oral doses of tosedostat had predictable and manageable toxicities and results demonstrated encouraging response rates including a high-response rate among patients who received prior hypomethylating agents, which are used to treat myelodysplastic syndrome, or MDS, a precursor of AML. There are three ongoing Phase 2 investigator-sponsored trials examining the activity of tosedostat in combination with standard agents in patients with AML or MDS. We expect data from these trials may be used to determine the appropriate design for a Phase 3 trial.

We have entered into an exclusiveworldwide rights to use, develop, import and export brostallicin pursuant to a license agreement, with Chroma Therapeutics, Ltd., or Chroma. Our agreement with Chromawhich is discussed in more detail in Part I, Item 1, Business, “—License Agreements and Additional Milestone Activities.”

Brostallicin

We are developing brostallicin through our worldwide rights to use, develop, import and export brostallicin. Brostallicin is a synthetic DNA minor groove binding agent that has demonstrated anti-tumor activity and a favorable safety profile in clinical trials.

An investigator-sponsored study of brostallicin with the North Central Cancer Treatment Group, or the NCCTG, opened for enrollment a Phase 2 study of brostallicin in combination with cisplatin in patients with metastatic triple-negative breast cancer, or mTNBC. mTNBC is defined by tumors lacking expression of estrogen, progesterone receptors and without over-expression of HER2. Women with mTNBC have very limited effective treatments and, based on the novel mechanism of action of brostallicin and the recognized activity of cisplatin in this disease, the combination of the two agents will be explored by the NCCTG. In addition to standard clinical efficacy measures, biological endpoints will also be evaluated to assist in understanding the specific activity of brostallicin in this disease. In December 2012, preliminary results of this study were presented at the San Antonio Breast Cancer Symposium. As of the preliminary analysis, 10 of 47 evaluable patients (21%) achieved a confirmed tumor response with nine patients having a partial response (PR) and one complete response (CR). The 3-month PFS was at 51%. Adverse events were manageable. Final results are expected to be presented in 2013. We have entered into a license agreement with Nerviano Medical Sciences, S.r.l., or Nerviano. Our agreement with Nerviano is discussed in more detail in Part I, Item 1, Business, “—“Business—License Agreements and Additional Milestone Activities.”

Research and Development CostsExpenses

Research and development is essential to our business. We spent $33.6 million, $33.2 million and $34.9 million in 2013, 2012 and $27.0 million in 2012, 2011, and 2010, respectively, on company-sponsored research and development activities. Because of the risks and uncertainties associated with theThe development of a product candidate involves inherent risks and uncertainties, including, among other things, that we cannot accurately predict when or whether we will successfully completewith any certainty the developmentpace of enrollment of our product candidates or the ultimate product development cost.

Weclinical trials. As a result, we are unable to provide the nature, timing and estimated costs of the efforts necessary to complete the development of PIXUVRI, Opaxio, pacritinib, tosedostat and brostallicin because, among other reasons, we cannot predict with any certaintyOpaxio or to complete the pacepost-approval commitment study of enrollment of our clinical trials.PIXUVRI. Further, third parties are conducting key clinical trials for Opaxiotosedostat and brostallicin.Opaxio. Even after a clinical trial is enrolled, preclinical and clinical data can be interpreted in different ways, which could delay, limit or preclude regulatory approval and advancement of this compound through the development process. For these reasons, among others, we cannot estimate the date on which clinical development of these product candidates will be completed or when we will generate material net cash inflows from PIXUVRI or be able to begin commercializing, Opaxio, pacritinib, tosedostat and brostallicinOpaxio to generate material net cash inflows. For additional information relating to our research and development expenses, see Part II, Item 7, “Management’s Discussion and Analysis of Financial Condition and Results of Operations—Results of Operations—Research and development expenses.”

The risks and uncertainties associated with completing development of our product candidates on schedule and the consequences to operations, financial position and liquidity if our research and development projects are not completed timely are discussed in more detail in the following risk factors, which begin on page 20 of this Form 10-K: “Our financial condition may be harmed if third parties default in the performance of contractual obligations.Part I, Item 1A, “Risk Factors.; “We may be delayed, limited or precluded from obtaining regulatory approval of Opaxio as a maintenance therapy for advanced-stage ovarian cancer and as a radiation sensitizer.”; “We may not obtain or maintain the regulatory approvals required to commercialize some or all of our products.”; “Even if our drug candidates are successful in clinical trials and receive regulatory approvals, we may not be able to successfully commercialize them.”; “If we do not successfully develop our product candidates into marketable products, we may be unable to generate significant revenue or become profitable.”; and “We may take longer to complete our clinical trials than we expect, or we may not be able to complete them at all.

License Agreements and Additional Milestone Activities

NovartisBaxter

In September 2006,November 2013, we entered into an exclusive worldwide licensing agreement, or the NovartisBaxter Agreement with Novartis International Pharmaceutical Ltd., or Novartis, for the development and commercialization of Opaxio.pacritinib for use in oncology and potentially additional therapeutic areas. Under the Novartisterms of the Baxter Agreement, total productwe have granted to Baxter an exclusive, worldwide (subject to certain co-promotion rights for us in the U.S.), royalty-bearing, non-transferable, and registration milestones(under certain circumstances outside of the U.S.) sub-licensable license to our know-how and patents relating to pacritinib. Licensed products under the Baxter Agreement consist of products in which pacritinib is an ingredient.

Baxter has granted to us a non-exclusive license in order for us to perform our rights and obligations under the Baxter Agreement, including our co-promotion rights and manufacturing obligations.

Baxter paid us an upfront payment of $60 million, which included $30 million to acquire 30,000 shares of our convertible preferred stock. In November 2013, Baxter converted such preferred stock into our common stock at an initial conversion price of $1.914 per share.

We are also eligible to receive potential payments of up to $302 million upon the successful achievement of certain development and commercialization milestones, comprised of $112 million of potential clinical,

Opaxio could amountregulatory and commercial launch milestone payments, and potential additional sales milestone payments of up to approximately $270$190 million. Royalty paymentsOf such milestones, $67 million relates to us for Opaxio are basedclinical progress milestones. We and Baxter will jointly commercialize and share profits and losses on worldwide Opaxio net sales volumes and range fromof pacritinib in the low- to mid-twenties as a percentage of net sales.U.S.

Pursuant to the Novartis Agreement, we are responsible for the development costs of Opaxio and have control over development of Opaxio unless and until Novartis exercises its development rights, or the Development Rights. In the event that Novartis exercises the Development Rights, then from and after the date of such exercise, or the Novartis Development Commencement Date, Novartis will be solely responsible for the development of Opaxio. Prior to the Novartis Development Commencement Date, we are solely responsible for all costs associated with the development of Opaxio, but will be reimbursed by Novartis for certain costs after the Novartis Development Commencement Date. After the Novartis Development Commencement Date, NovartisWe will be responsible for all development costs associated withincurred prior to January 1, 2014, as well as for approximately $96 million in U.S. and E.U. development costs incurred on or after January 1, 2014. Of such $96 million in development costs, we anticipate that up to $67 million will be offset through the potential receipt from Baxter through 2015 of the aforementioned clinical progress milestones. All development of Opaxio,costs exceeding the $96 million threshold will generally be shared as follows: (i) costs generally applicable worldwide will be shared 75 percent to Baxter and 25 percent to us, (ii) costs applicable to territories exclusive to Baxter will be 100 percent borne by Baxter and (iii) costs applicable exclusively to co-promotion in the U.S. will be shared equally between the parties, subject to certain limitations; however,exceptions.

Outside the U.S., we are also responsibleeligible to receive tiered high single digit to mid-teen percentage royalty payments based on net sales for reimbursing Novartismyelofibrosis, and higher double digit royalties for certain costsother indications, subject to reduction by up to 50 percent if (i) Baxter is required to obtain additional third party licenses, on which it is obligated to pay royalties, to fulfill its obligations under the Baxter Agreement and (ii) in any jurisdiction where there is no longer either regulatory exclusivity or patent protection.

Joint commercialization, manufacturing, development and steering committees with representatives from Baxter and from us will be established pursuant to the NovartisBaxter Agreement.

The NovartisBaxter Agreement also provides Novartis with an option to develop and commercialize PIXUVRI based on agreed terms. If Novartis exercises its option on PIXUVRI under certain conditions and we are able to negotiate and sign a definitive license agreement with Novartis, Novartis would be requiredwill expire when there is no longer any obligation for Baxter to pay us a $7.5 million license fee, up to $104 million in registration and sales related milestones and a royalty on PIXUVRI worldwide net sales. Royalty paymentsroyalties to us in any jurisdiction, at which time the licenses granted to Baxter will become perpetual and royalty-free. We or Baxter may terminate the Baxter Agreement prior to its expiration in certain circumstances. Following the one year anniversary of receipt of regulatory approval in Australia, Canada, China, France, Germany, Italy, Japan, Spain, the U.K. or the U.S., we may terminate the Baxter Agreement as to one or more particular countries if Baxter has not undertaken requisite regulatory or commercialization efforts in the applicable country and certain other conditions are met. Baxter may terminate the Baxter Agreement earlier than its expiration in certain circumstances including (i) in the event development costs for PIXUVRImyelofibrosis for the period commencing January 1, 2014 are based on worldwide PIXUVRI net sales volumes and range fromreasonably projected to exceed a specified threshold, (ii) as to some or all countries in the low-double digits to the low-thirties as a percentageevent of net sales.

Royalties for Opaxio and PIXUVRI are payable from the first commercial sale of a product until the laterfailure of the expirationlicensed product or (iii) without cause following the one-year anniversary of the last to expire valid claimeffective date of the licensorBaxter Agreement, provided that such termination will have a lead-in period of six months before it becomes effective. Additionally, either party may terminate the Baxter Agreement prior to its expiration in events of force majeure, or the occurrence of other certain events,party’s uncured material breach or the Royalty Term. Unless otherwise terminated, the term of the Novartis Agreement continues on a product-by-product and country-by-country basis until the expiration of the last-to-expire Royalty Term with respect to a product in such certain country. In the event Novartis does not exercise its Development Rights until the earlier to occur of (i) the expiration of 30 days following receipt by Novartis of the product approval information package pursuant to the Novartis Agreement or (ii) Novartis’ determination, in its sole discretion, to terminate the Development Rights exercise period by written notice to us (events (i) and (ii) collectively being referred to as the “Development Rights Exercise Period”), the Novartis Agreement will automatically terminate upon expiration of the Development Rights Exercise Period.insolvency. In the event of an uncured material breach of the Novartis Agreement, the non-breaching party may terminate the Novartis Agreement. Either party may terminate the Novartis Agreement without notice upon the bankruptcy of the other party. In addition, Novartis may terminate the Novartis Agreement without cause at any time (a) in its entirety within 30 days written noticea termination prior to the exercise by Novartisexpiration date, rights in pacritinib will revert to us.

The Baxter Agreement also requires Baxter and us to negotiate and enter into a Manufacturing and Supply Agreement, which will provide for the manufacture of its Development Rights or (b) on a product-by-product or country-by-country basis onthe licensed products, with an option for Baxter to finish and package encapsulated bulk product, within 180 days written notice afterof the exercise by Novartiseffective date of its Development Rights. If we experience a change of control that involves certain major pharmaceutical companies, Novartis may terminate the Novartis Agreement by written notice within a certain period of time to us or our successor entity.

As of December 31, 2012, we have not received any milestone payments and we will not receive any milestone payments unless Novartis elects to exercise its option to participate in the development and commercialization of PIXUVRI or exercise its Development Rights for Opaxio.Baxter Agreement.

University of Vermont

We entered into an agreement with the University of Vermont, or UVM, Agreement, in March 1995, as amended, in March 2000,or the UVM Agreement, which grants us an exclusive license, with the right to sublicense, for the rights to PIXUVRI. Pursuant to the UVM Agreement, we acquired the rights to make, have made, sell and use PIXUVRI, and we are obligated to make royalty payments to UVM ranging from low-single digits to mid-single digits as a percentage of net sales. The higher royalty rate is payable for net sales in countries where specified UVM licensed patents exist, or where we have obtained orphan drug protection, until such UVM patents or such protection no longer exists. For a period of ten years after first commercialization of PIXUVRI, the lower royalty rate is payable for net sales in such countries after expiration of the designated UVM patents or loss of orphan

drug protection, and in all other countries without such specified UVM patents or orphan drug protection. Unless otherwise terminated, the term of the UVM Agreement continues for the life of the licensed patents in those countries in

which a licensed patent exists, and continues for ten years after the first sale of PIXUVRI in those countries where no such patents exist. We may terminate the UVM Agreement, on a country-by-country basis or on a patent-by-patent basis, at any time upon advance written notice. UVM may terminate the UVM Agreement upon advance written notice in the event royalty payments are not made. In addition, either party may terminate the UVM Agreement (a) in the event of an uncured material breach of the UVM Agreement by the other party;party or (b) in the event of bankruptcy of the other party.

S*BIO Pte Ltd

Pursuant to the S*BIO Agreement, weWe acquired the compounds SB1518 (which is referred to as “pacritinib”) and SB1578, which inhibit Janus Kinase 2, commonly referredJAK2, from S*BIO Pte Ltd, or S*BIO, in May 2012. Under our agreement with S*BIO, we are required to as JAK2, and we made an initial payment of $2 million in cash at signing. In consideration of the assets and rights acquired under the S*BIO Agreement, we made an additional payment of $13 million in cash and issued 15,000 shares of our Series 16 Preferred Stockmake milestone payments to S*BIO which were automatically converted into 2.5 million shares of our common stock. The S*BIO Agreement also provides S*BIO with a contingent right to certain milestone payments from us up to an aggregate amount of $132.5 million if certain U.S., E.U. and Japanese regulatory approvals are obtained or if certain worldwide net sales thresholds are met in connection with any pharmaceutical product containing or comprising any Seller Compoundcompound that we acquired from S*BIO for use for specific diseases, infections or other conditions. At our election, we may pay up to 50%50 percent of any milestone payments to S*BIO through the issuance of shares of our common stock or shares of our preferred stock convertible into our common stock. In addition, S*BIO will also be entitled to receive royalty payments from us at incremental rates in the low-single digits based on certain worldwide net sales thresholds on a product-by-product and country-by-country basis.

Chroma Therapeutics, Ltd.

We entered into an agreement, with Chroma, or the Chroma License Agreement, with Chroma Therapeutics, Ltd., or Chroma, in March 2011 under which we have an exclusive license to certain technology and intellectual property controlled by Chroma to develop and commercialize the drug candidate, tosedostat, in North, Central and South America, or the Licensed Territory. Pursuant to the terms of the Chroma License Agreement, we paid Chroma an upfront fee of $5.0 million upon execution of the agreement and willare required to make a milestone payment to Chroma of $5.0 million upon the initiation of the first pivotal trial. The Chroma License Agreement also includes additional development- and sales-based milestone payments related to acute myeloid leukemia, or AML, and certain other indications, up to a maximum amount of $209.0 million payable by us to Chroma if all development and sales milestones are achieved.

Under the Chroma License Agreement, we are required to pay Chroma royalties on net sales of tosedostat in any country within the Licensed Territory, commencingTerritory. Royalties commence on the first commercial sale of tosedostat in any country in the Licensed Territory and continuingcontinue with respect to that country until the laterlatest of (a) the expiration date of the last patent claim, covering tosedostat in that country, (b) the expiration of all regulatory exclusivity periods for tosedostat in that country or (c) ten years after the first commercial sale in that country. Royalty payments to Chroma are based on net sales volumes in any country within the Licensed Territory and range from the low- to mid-teens as a percentage of net sales.

Under the Chroma License Agreement, we are required to oversee and beare responsible for performing the development operations and commercialization activities in the Licensed Territory, and Chroma will oversee and beis responsible for performing the development operations and commercialization activities worldwide except for the Licensed Territory, or the ROW Territory. Development costs may not exceed $50.0 million for the first three years of the Chroma License Agreement unless agreed upon by the parties and weparties. We will be responsible for 75%75 percent of all development costs, while Chroma will be responsible for 25%25 percent of all development costs, subject to certain exceptions. Chroma is responsible for the manufacturing of tosedostat for development purposes in the Licensed Territory and the ROW Territory in accordance with the terms of the Chroma Supply Agreement.our supply agreement with Chroma. We have the

option of obtaining a commercial supply of tosedostat from Chroma or from another manufacturer at our sole discretion in the Licensed Territory. The Chroma License Agreement may be terminated by us at our convenience upon 120 days’ written notice to Chroma. The Chroma License Agreement may also be terminated by either party following a material breach by the other party subject to notice and cure periods.

By a letter dated July 18, 2012, Chroma notified us that Chroma alleges breaches under As discussed in Part I, Item 3, “Legal Proceedings,” the Chroma License Agreement. Chroma asserts that weparties have not complied with the Chroma License Agreement because we made decisions with respect to the development of tosedostat without the approval of the joint committees to be established pursuant to the terms of the Chroma License Agreement, did not hold meetings of those committees and have not used diligent efforts in the development of tosedostat. We dispute Chroma’s allegations and intend to vigorously defend our development activities and judgments. In particular, we dispute Chroma’s lack of diligence claim based in part on the appropriateness of completing the ongoing Phase 2 combination trials prior to developing a Phase 3 trial design. In addition, we believe that Chroma has failed to comply with its antecedent obligations with respect to the joint committees and failed to demonstrate an ability to manufacture tosedostat to the required standards under the terms of the Chroma License Agreement. Under the Chroma License Agreement there is a 90 day cure period for any nonpayment default, which period shall be extended to 180 days if the party is using efforts to cure. A party may terminate the Chroma License Agreement for a material breach only after arbitration in accordance with the terms of the Chroma License Agreement.

Effective September 25, 2012, we and Chroma entered into a three month standstill with respect to the parties’ respective claimscertain disputes arising under the Chroma License Agreement, but otherwise reserving the parties’ respective rightsalthough no court proceedings have commenced as of the commencementtime of the standstill period. Effective December 25, 2012, the standstill was subsequently extended until March 25, 2013 and is terminable by either party on one month’s notice.this filing.

Gynecologic Oncology Group

We entered into an agreement with the GOG or the GOG Agreement, in March 2004, as amended, on August 2008, related to the GOG-0212 trial of Opaxio in patients with ovarian cancer, which the GOG is conducting. We recorded a $1.7$0.9 million payment due to the GOG based on the 8001,100 patient enrollment milestone achieved in the secondthird quarter of 2011, of which $0.4 million was outstanding and included inaccounts payable as of December 31, 2012. Under this agreement,2013. In addition, we aremay be required to pay up to $1.8$1.2 million in additional milestone payments related toupon the trial,attainment of certain milestones, as well as other fees under certain circumstances, of which $0.5$0.7 million will become due upon receipthas been recorded as an accrued expense in our Consolidated Financial Statements as of the interim analysis and data transfer and $0.9 million will become due upon completion of the 1,100 patient enrollment milestone, both of which may occur inDecember 31, 2013.

PG-TXL

In November 1998, we entered into an agreement, with PG-TXL Company, L.P., or the PG-TXL Agreement, (aswith PG-TXL, as amended, in February 2006), which grants us an exclusive worldwide license for the rights to Opaxio and to all potential uses of PG-TXL’s polymer technology. Pursuant to the PG-TXL Agreement, we acquired the rights to research, develop, manufacture, market and sell anti-cancer drugs developed using this polymer technology. Pursuant to the PG-TXL Agreement, we are obligated to make payments to PG-TXL upon the achievement of certain development and regulatory milestones of up to $14.4 million. The timing of the remaining milestone payments under the PG-TXL Agreement is based on trial commencements and completions for compounds protected by PG-TXL license rights, and regulatory and marketing approval of those compounds by the FDA and the EMA. Additionally, we are required to make royalty payments to PG-TXL based on net sales. Our royalty payments range from low-single digits to mid-single digits as a percentage of net sales. Unless otherwise terminated, the term of the PG-TXL Agreement continues until no royalties are payable to PG-TXL. We may terminate the PG-TXL Agreement (i) upon advance written notice to PG-TXL in the event issues regarding the safety of the products licensed pursuant to the PG-TXL Agreement arise during development or clinical data obtained reveal a materially adverse tolerability profile for the licensed product in humans, or (ii) for any reason upon advance written notice. In addition, either party may terminate the PG-TXL Agreement (a) upon advance

written notice in the event certain license fee payments are not made; (b) in the event of an uncured material breach of the respective material obligations and conditions of the PG-TXL Agreement; or (c) in the event of liquidation or bankruptcy of a party.

Novartis

In January 2014, we entered into a termination agreement, or the Termination Agreement, with Novartis International Pharmaceutical Ltd., or Novartis, to reacquire the rights to PIXUVRI and Opaxio, or the Compounds, previously granted to Novartis under our License and Co-Development Agreement with Novartis entered into in September 2006, as amended, or the Original Agreement. Pursuant to the Termination Agreement, the Original Agreement was terminated in its entirety, other than certain customary provisions, including those pertaining to confidentiality and indemnification, which survive termination.

Under the Termination Agreement, we agreed not to transfer, license, sublicense or otherwise grant rights with respect to intellectual property of the Compounds unless the transferee/licensee/sublicensee agrees to be bound by the terms of the Termination Agreement. We also agreed to provide potential payments to Novartis, including a percentage ranging from the low double-digits to the mid-teens, of any consideration received by us or our affiliates in connection with any transfer, license, sublicense or other grant of rights with respect to intellectual property of PIXUVRI or Opaxio, respectively; provided that such payments will not exceed certain prescribed ceilings in the low-single digit millions. Novartis is entitled to receive potential payments of up to $16.6 million upon the successful achievement of certain sales milestones of the Compounds. Novartis is also eligible to receive tiered low single-digit percentage royalty payments for the first several hundred million in annual net sales, and ten percent royalty payments thereafter based on annual net sales of each Compound, subject to reduction in the event generic drugs are introduced and sold by a third party, causing the sale of PIXUVRI or Opaxio to fall by a percentage in the high double-digits. To the extent we are required to pay royalties on net sales of Opaxio pursuant to the PG-TXL Agreement, we may credit a percentage of the amount of such royalties paid to those payable to Novartis, subject to certain exceptions. Notwithstanding the foregoing,

royalty payments for both PIXUVRI and Opaxio are subject to certain minimum floor percentages in the low single-digits.

Nerviano Medical Sciences

Under aOur license agreement entered into with Nerviano Medical Sciences, S.r.l. for brostallicin, ordated October 6, 2006, provides for the Nerviano Agreement, we may be required to paypotential payment by us of up to $80.0$80 million in milestone payments based on the achievement of certain product development results. Due to the early stage of development thatof brostallicin, is in, we are not able to determine whether the clinical trials will be successful and, therefore, cannot make a determination that the milestone payments are reasonably likely to occur at this time.

Cephalon

Pursuant toIn June 2005, we entered into an acquisition agreement entered into with Cephalon, Inc., or Cephalon. Cephalon in June 2005,was subsequently acquired by Teva Pharmaceutical Industries Ltd., or Teva. Under the agreement, we have the right to receive up to $100.0$100 million in payments upon achievement by CephalonTeva of specified sales and development milestones related to TRISENOX. However, theIn November 2013, we received a $5 million payment related to achievement of any such milestones is uncertain at this time.a sales milestone.

Patents and Proprietary Rights

We dedicate significant resources to protecting our intellectual property, which is important to our business. We have filed numerous patent applications in the U.S. and various other countries seeking protection of inventions originating from our research and development, and we have also obtained rights to various patents and patent applications under licenses with third parties.parties and through acquisitions. Patents have been issued on many of these applications. We have pending patent applications or issued patents in the U.S. and foreign countries directed to PIXUVRI, Opaxio, pacritinib, tosedostat, Opaxio, brostallicin and other product candidates. However, the lives of these patents are limited. Patents for the individual products extend for varying periods according to the date of the patent filing or grant and the legal term of patents in the various countries where patent protection is obtained. The PIXUVRI-directed patents in the U.S. will expire in 2014. The Opaxio-directed U.S. patents will expire on various dates ranging from 2017 through 2018. The pacritinib-directed U.S. patents will expire from 2026 through 2029. The PIXUVRI-directed U.S. patents will expire in 2014. The tosedostat-directed U.S. patents will expire in 2017. The brostallicin-directed U.S. patents will expire on various dates ranging between 2017 through 2021. The PIXUVRI-directed patents currently in force in Europe will expire from 20132015 through 2023. Such patent expirations do not account for potential extensionsSome of these European patents are subject to Supplementary Protection Certificates such that may be available in certain countries. For example,the extended patents will expire from 2020 to 2027. Although certain PIXUVRI-directed patents may be subject to possible patent-term extensions that could provide extensions through 2019 in the U.S. and through 2027 in some additional countries in Europe. Supplementary Protection Certificates extending certain PIXUVRI-directed patents have been granted in Italy and Luxembourg, butEurope, there can be no guarantee of extensions of PIXUVRI-directed or other patents in other countries. The risks and uncertainties associated with our intellectual property, including our patents, are discussed in more detail in the following risk factors, which begin on page 2021 of this Annual Report on Form 10-K: “We hold rights under numerous patents that we have acquired or licensed or that protect inventions originating from our research and development, and the expiration of any one or more of these patents may allow our competitors to copy the inventions that are currently protected.”; “If we fail to adequately protect our intellectual property, our competitive position could be harmed.”; “Patent litigation is widespread in the biotechnology industry, and any patent litigation could harm our business.”; and “We may be unable to obtain or protect our intellectual property rights and we may be liable for infringing upon the intellectual property rights of others, which may cause us to engage in costly litigation and, if unsuccessful, could cause us to pay substantial damages and prohibit us from selling our products.”

Manufacturing, Distribution and Associated Matters

We currently use, and expect to continue to be dependent upon,Our manufacturing strategy utilizes third-party contract manufacturers for our products and contract service providersproduct candidates. We utilize third-party contractors for raw materials, active pharmaceutical ingredients and finished drug product, as well as for labeling, packaging, storing and distributing our products and product candidates. As

our business continues to manufacture, testexpand, we expect that our manufacturing, distribution and distribute eachassociated requirements will increase correspondingly. One such requirement becoming increasingly important relates to our commercial supply needs; while we currently have a commercial supply arrangement for PIXUVRI, we do not presently have any such arrangement in place for pacritinib (or for our other product candidates). In particular, as we have continued to advance the development of pacritinib and position such product for potential commercialization, procuring a qualified commercial supplier for pacritinib has become an important objective.

Integral to our product candidates and commercial product. We have established amanufacturing strategy is our quality control and quality assurance program, including a set ofwhich includes standard operating procedures and

specifications with the goal that our products and product candidates are manufactured in accordance with current Good Manufacturing Practices, or cGMPs, and other applicable global regulations. WeThe cGMP compliance includes strict adherence to regulations for quality control, quality assurance and the maintenance of records and documentation. The manufacturing facilities for products and product candidates must meet cGMP requirements, and with respect to the commercial products, must have acquired FDA, EMA and any other applicable regulatory approval. In this regard, we expect that we will need to invest in additional manufacturing development, manufacturing and supply chain resources, and may seek to enter into additional collaborative arrangements with other parties that have established manufacturing capabilities. It is likely that we will continue to rely on third-partycontract manufacturers for our development and commercial products on a contract basis. Currently, we have agreements with third-party vendors to produce testsufficient quantities of our products and distribute PIXUVRI, Opaxio, pacritinib, tosedostat and brostallicin drug supplyproduct candidates in accordance with cGMPs for use in clinical trials and commercial product for PIXUVRI. We will be dependent upon these third-party vendors to supply us in a timely manner with products manufactured in compliance with cGMPs or similar standards imposed by U.S. and/or foreign regulatory authorities where our products are being developed, tested, and/or marketed.distribution.

We entered intobelieve our manufacturing strategy of utilizing qualified outside vendors allows us to direct our financial and managerial resources to development and commercialization activities, rather than to the establishment of a manufacturing supply agreement, or the NerPharMa Agreement, with NerPharMa, S.r.l., or NerPharMa (a pharmaceutical manufacturing company belonging to Nerviano Medical Sciences, S.r.l., in Nerviano, Italy), for our product, PIXUVRI. The NerPharMa Agreement is a five year non-exclusive agreement and provides for both the commercial and clinical supply of PIXUVRI. The NerPharMa Agreement commenced on July 9, 2010 and expires on the fifth anniversary date of the first government approval obtained either in the United States or Europe. The NerPharMa Agreement may be terminated for an uncured material breach, insolvency or the filing of bankruptcy, or by mutual agreement. We may also terminate the NerPharMa Agreement (i) upon prior written notice in the event of failure of three or more of seven consecutive lots of product or (ii) in the event NerPharMa is acquired or a substantial portion of NerPharMa’s assets related to the NerPharMa Agreement are sold to another entity.

We entered into a manufacturing and supply agreement, or the Chroma Supply Agreement, with Chroma for our drug candidate, tosedostat. The Chroma Supply Agreement is a non-exclusive agreement and provides for both the clinical and commercial drug supply of tosedostat. The Chroma Supply Agreement commenced on June 8, 2011 and expires two years from the date when tosedostat is granted first approval for commercial distribution by the applicable regulatory authority in the licensed territory. Upon expiration of the initial term, we have a one year renewal option. We have the right to terminate the Chroma Supply Agreement without cause with 90 days written notice to Chroma. Both parties have the right to terminate for breach, bankruptcy, mutual agreement, or termination of the development agreement.infrastructure.

Competition

Competition in the pharmaceutical and biotechnology industries is intense. We face competition from a variety of companies focused on developing oncology drugs. We compete with large pharmaceutical companies and with other specialized biotechnology companies. With respect to PIXUVRI, there are no other products approved in the E.U. as monotherapy for the treatment of adult patients with multiply relapsed or refractory aggressive non-Hodgkin lymphoma;NHL; however there are other agents approved to treat aggressive non-Hodgkin lymphomaNHL that could be used in this setting, including both branded and generic anthracyclines as well as mitoxanthrone.mitoxantrone. There are also other investigational candidates being tested in aggressive non-Hodgkin lymphoma whichNHL that, if approved, could compete with PIXUVRI.

With respect to our other investigational candidates, if approved, they may face competition from compounds that are currently approved or may be approved in the future. Pacritinib would compete with Incyte, which markets Jakafi®, and potentially other candidates in development that target JAK inhibition to treat cancer. Tosedostat would compete with corporations such as Eisai Inc., which markets Dacogen®; Celgene Corporation, which markets Vidaza®, Revlimid®, and Thalomid®; Genzyme Corporation, which markets Clolar® and new anti-cancer drugs that may be developed and marketed. Opaxio would compete with other taxanes, epothilones, and other cytotoxic agents, which inhibit cancer cells by a mechanism similar to taxanes, or similar products. Such corporations include, among others, Bristol-Myers Squibb Co. and others,, which market paclitaxel and generic forms of paclitaxel; Sanofi-Aventis U.S. LLC, which markets docetaxel; Genentech, Inc., Hoffmann-La Roche Inc. and OSI Pharmaceuticals,Astellas Pharma US, Inc., which market Tarceva®; Genentech, Inc. and Hoffmann-La Roche Inc., which market Avastin®; Eli Lilly & Company, which markets Alimta®; and Celgene Corporation, which markets Abraxane®. Tosedostat would compete with corporations such as Eisai, which markets Dacogen®; Celgene, which markets Vidaza®, Revlimid®, and Thalomid®; Genzyme which markets Clolar® and new anti-cancer drugs that may be developed and marketed.

Many of our existing or potential competitors have substantially greater financial, technical and human resources than us and may be better equipped to develop, manufacture and market products. Smaller companies may also prove to be significant competitors, particularly through collaborative arrangements with large pharmaceutical and established biotechnology companies. Many of these competitors have products that have been approved or are in development and operate large, well-funded research and development programs.

We expect to encounter significant competition for the principal pharmaceutical products we plan to develop. Companies that complete clinical trials, obtain required regulatory approvals and commence commercial sales of their products before us may achieve a significant competitive advantage if their products work through a similar mechanism as our products and if the approved indications are similar. We do not believe competition is as intense among products that treat cancer through novel delivery or therapeutic mechanisms

where these mechanisms translate into a clinical advantage in safety and/or efficacy. A number of biotechnology and pharmaceutical companies are developing new products for the treatment of the same diseases being targeted by us. In some instances, such products have already entered late-stage clinical trials or received FDA or EC approval. However, cancer drugs with distinctly different mechanisms of action are often used together in combination for treating cancer, allowing several different products to target the same cancer indication or disease type. Such combination therapy is typically supported by clinical trials that demonstrate the advantage of combination therapy over that of a single-agent treatment.

We believe that our ability to compete successfully will be based on our ability to create and maintain scientifically advanced technology, develop proprietary products, attract and retain scientific personnel, obtain patent or other protection for our products, obtain required regulatory approvals and manufacture and successfully market our products, either alone or through outside parties. We will continue to seek licenses with respect to technology related to our field of interest and may face competition with respect to such efforts. See the risk factor, “We face direct and intense competition from our competitors in the biotechnology and pharmaceutical industries, and we may not compete successfully against them.” in Part I, Item 1A, “Risk Factors” of this Annual Report on Form 10-K for additional information regarding the risks and uncertainties we face due to competition in our industry.

Government Regulation

The research, development, testing, manufacture, labeling, promotion, advertising, distribution and marketing, among other things, of our products are extensively regulated by governmental authorities in the United StatesU.S. and other countries.

U.S. Regulation.

In the United States,U.S., the FDA regulates drugs under the Federal Food, Drug, and Cosmetic Act, or FDCA, Public Health Service Act, or PHSA, and their implementing regulations. Failure to comply with applicable U.S. requirements may subject us to administrative or judicial sanctions, such as FDA refusal to approve pending new drug applications or supplemental applications, warning letters, product recalls, product seizures, total or partial suspension of production or distribution, injunctions and/or criminal prosecution.

Drug Approval Process.    None of our drugs may be marketed in the United StatesU.S. until such drug has received FDA approval. The steps required before a drug may be marketed in the United StatesU.S. include:

 

preclinical laboratory tests, animal studies and formulation studies;

 

submission to the FDA of an Investigational New Drug Application, or an IND, for human clinical testing, which must become effective before human clinical trials may begin;

 

adequate and well-controlled human clinical trials to establish the safety and efficacy of the investigational product for each indication;

submission to the FDA of an NDA;

 

satisfactory completion of an FDA inspection of the manufacturing facility or facilities at which the drug is produced, tested, and distributed to assess compliance with cGMPs and Good Distribution Practices; and

 

FDA review and approval of the NDA.

Preclinical tests include laboratory evaluation of product chemistry, toxicity and formulation, as well as animal studies. The conduct of the preclinical tests and formulation of the compounds for testing must comply with federal regulations and requirements. The results of the preclinical tests, together with manufacturing information and analytical data, are submitted to the FDA as part of an IND, which must become effective before human clinical trials may begin. An IND will automatically become effective 30 days after receipt by the FDA

unless, before that time, the FDA raises concerns or questions about issues such as the conduct of the trials as outlined in the IND. In such a case, the IND sponsor and the FDA must resolve any outstanding FDA concerns or questions before clinical trials can proceed. We cannot be sure that submission of an IND will result in the FDA allowing clinical trials to begin.

Clinical trials involve the administration of the investigational product to human subjects under the supervision of qualified investigators. Clinical trials are conducted under protocols detailing the objectives of the study, the parameters to be used in monitoring safety and the effectiveness criteria to be evaluated. Each protocol must be submitted to the FDA as part of the IND.

Clinical trials typically are conducted in three sequential phases, but the phases may overlap or be combined. The study protocol and informed consent information for study subjects in clinical trials must also be approved by an Institutional Review Board for each institution where the trials will be conducted. Study subjects must sign an informed consent form before participating in a clinical trial. Phase 1 usually involves the initial introduction of the investigational product into people to evaluate its short-term safety, dosage tolerance, metabolism, pharmacokinetics and pharmacologic actions, and, if possible, to gain an early indication of its effectiveness. Phase 2 usually involves trials in a limited patient population to (i) evaluate dosage tolerance and appropriate dosage, (ii) identify possible adverse effects and safety risks, and (iii) evaluate preliminarily the efficacy of the product candidate for specific indications. Phase 3 trials usually further evaluate clinical efficacy and test further for safety by using the product candidate in its final form in an expanded patient population. There can be no assurance that Phase 1, Phase 2 or Phase 3 testing will be completed successfully within any specified period of time, if at all. Furthermore, we or the FDA may suspend clinical trials at any time on various grounds, including a finding that the subjects or patients are being exposed to an unacceptable health risk.

The FDA and IND sponsor may agree in writing on the design and size of clinical trials intended to form the primary basis of an effectiveness claim in an NDA application. This process is known as a SPA. These agreements may not be changed after the clinical trials begin, except in limited circumstances. The existence of a SPA, however, does not assure approval of a product candidate.

Assuming successful completion of the required clinical testing, the results of the preclinical studies and of the clinical trials, together with other detailed information, including information on the manufacture and composition of the investigational product, are submitted to the FDA in the form of an NDA requesting approval to market the product for one or more indications. The testing and approval process requires substantial time, effort and financial resources. Submission of an NDA requires payment of a substantial review user fee to the FDA. The FDA will review the application and may deem it to be inadequate to support commercial marketing, and we cannot be sure that any approval will be granted on a timely basis, if at all. The FDA may also seek the advice of an advisory committee, typically a panel of clinicians practicing in the field for which the product is intended, for review, evaluation and a recommendation as to whether the application should be approved. The FDA is not bound by the recommendations of the advisory committee.

The FDA has various programs, including fast track, priority review and accelerated approval that are intended to expedite or simplify the process for reviewing drugs and/or provide for approval on the basis of surrogate endpoints. Generally, drugs that may be eligible for one or more of these programs are those for serious or life threatening conditions, those with the potential to address unmet medical needs and those that provide meaningful benefit over existing treatments. We cannot be sure that any of our drugs will qualify for any of these programs, or that, if a drug does qualify, the review time will be reduced or the product will be approved.

Before approving a NDA, the FDA usually will inspect the facility or the facilities where the product is manufactured, tested and distributed and will not approve the product unless cGMP compliance is satisfactory. If the FDA evaluates the NDA and the manufacturing facilities as acceptable, the FDA may issue an approval letter, or in some cases, a complete response letter. A complete response letter contains a number of conditions that must be met in order to secure final approval of the NDA. When and if those conditions have been met to the

FDA’s satisfaction, the FDA will issue an approval letter. The approval letter authorizes commercial marketing of the drug for specific indications. As a condition of approval, the FDA may require post-marketing testing and surveillance to monitor the product’s safety or efficacy, or impose other post-approval commitment conditions.

After approval, certain changes to the approved product, such as adding new indications, making certain manufacturing changes or making certain additional labeling claims, are subject to further FDA review and approval. Obtaining approval for a new indication generally requires that additional clinical trials be conducted.

Post-Approval Requirements.    Holders of an approved NDA are required to: (i) report certain adverse reactions to the FDA, (ii) comply with certain requirements concerning advertising and promotional labeling for their products, and (iii) continue to have quality control and manufacturing procedures conform to cGMP after approval. The FDA periodically inspects the sponsor’s records related to safety reporting and/or manufacturing and distribution facilities; this latter effort includes assessment of compliance with cGMP. Accordingly, manufacturers must continue to expend time, money and effort in the area of production, quality control and distribution to maintain cGMP compliance. We use and will continue to use third-party manufacturers to produce our products in clinical and commercial quantities, and future FDA inspections may identify compliance issues at our facilities or at the facilities of our contract manufacturers that may disrupt production or distribution, or require substantial resources to correct. In addition, discovery of problems with a product after approval may result in restrictions on a product, manufacturer or holder of an approved NDA, including withdrawal of the product from the market.

Marketing of prescription drugs is also subject to significant regulation through federal and state agencies tasked with consumer protection and prevention of medical fraud, waste and abuse. We must comply with restrictions on off-label use promotion, anti-kickback, ongoing clinical trial registration, and limitations on gifts and payments to physicians. In December 2007, we entered into a corporate integrity agreement, or CIA, with the Office of the Inspector General, Health and Human Services, or OIG-HHS, as part of our settlement agreement with the United StatesU.S. Attorney’s Office, or USAO, for the Western District of Washington arising out of their investigation into certain of our prior marketing practices relating to TRISENOX, which was divested to Cephalon Inc. in July 2005. The term of the CIA, and the requirement that we establish a compliance committee and compliance program and adopt a formal code of conduct, expired as of December 22, 2012, however we intend to continue to abide by PhRMAthe Pharmaceutical Research and Manufacturers of America Code and FDA regulations.

Non-U.S. Regulation.Regulation.

Before our products can be marketed outside of the United States,U.S., they are subject to regulatory approval similar to that required in the United States,U.S., although the requirements governing the conduct of clinical trials, including additional clinical trials that may be required, product licensing, pricing and reimbursement vary widely from country to country. No action can be taken to market any product in a country until an appropriate application has been approved by the regulatory authorities in that country. The current approval process varies from country to country, and the time spent in gaining approval varies from that required for FDA approval. In

certain countries, the sales price of a product must also be approved. The pricing review period often begins after market approval is granted. Even if a product is approved by a regulatory authority, satisfactory prices may not be approved for such product.

In Europe, marketing authorizations may be submitted at a centralized, a decentralized or national level. The centralized procedure is mandatory for the approval of biotechnology products and provides for the grant of a single marketing authorization that is valid in all E.U. members’ states. Similar to accelerated approval regulations in the U.S., conditional marketing authorizations are granted in the E.U. to medicinal products with a positive benefit/risk assessment that address unmet medical needs and whose availability would result in a significant public health benefit. A conditional marketing authorization is renewable annually. Under the provisions of the conditional marketing authorization for PIXUVRI, we are required to complete a post-marketing study aimed at confirming the clinical benefit previously observed.

The approval of new drugs in the E.U. may be achieved using a mutual recognition procedure, which is available at the request of the applicant for all medicinal products that are not subject to the centralized procedure. These procedures apply in the EUE.U. member states, plus the European Economic Area countries,as well as in Norway and Iceland. Since the E.U. does not have jurisdiction over patient reimbursement or pricing matters in its member states, we are working or planning to work with individual countries on such matters across the region. However, there can be no assurance that our reimbursement strategy will secure reimbursement on a timely basis or at all.

Environmental Regulation

In connection with our research and development activities, we are subject to federal, state and local laws, rules, regulations and policies governing the use, generation, manufacture, storage, air emission, effluent discharge, handling and disposal of certain materials, biological specimens and wastes. Although we believe that we have complied with these laws, regulations and policies in all material respects and have not been required to take any significant action to correct any noncompliance, we may be required to incur significant costs to comply with environmental and health and safety regulations in the future. Our research and development involves the controlled use of hazardous materials, including, but not limited to, certain hazardous chemicals and radioactive materials. Although we believe that our safety procedures for handling and disposing of such materials comply with the standards prescribed by federal, state and local regulations, the risk of accidental contamination or injury from these materials cannot be eliminated. In the event of such an accident, we could be held liable for any damages that result and any such liability could exceed our resources. See the risk factor, “Since we use hazardous materials in our business, we may be subject to claims relating to improper handling, storage or disposal of these materials.” in Part I, Item 1A, “Risk Factors” of this Annual Report on Form 10-K for additional information regarding the risks and uncertainties we face due to the use of hazardous materials we use in our business.

Employees

As of December 31, 2012,2013, we employed 111106 individuals in the United States,U.S., including two employees at our majority-owned subsidiary Aequus Biopharma, Inc., and threefive in Europe. Our U.S. and U.K. employees do not have a collective bargaining agreement. One employeeTwo employees in Italy isare subject to a collective bargaining agreement. We believe our relations with our employees are good.

Information regarding our executive officers is set forth in Part III, Item 10 of this Annual Report on Form 10-K,below, which information is incorporated herein by reference.

Corporate Information

We were incorporated in Washington in 1991. We completed our initial public offering in 1997 and our shares are listed on The NASDAQ Capital Market in the U.S. and the Mercato Telemarico Azionario, (MTA)or the MTA, in Italy,

where our symbol is CTIC. Our principal executive offices are located at 3101 Western Avenue, Suite 600, Seattle, Washington 98121. Our telephone number is (206) 282-7100. Our website address ishttp://www.celltherapeutics.com. However, information found on our website is not incorporated by reference into this report. “CTI”, “PIXUVRI” and “Opaxio” are our proprietary marks. All other product names, trademarks and trade names referred to in this Form 10-K are the property of their respective owners. We make available free of charge on our website our Annual Reports on Form 10-K, Quarterly Reports on Form 10-Q, Current Reports on Form 8-K and other filings pursuant to Section 13(a) or 15(d) of the Exchange Act and amendments to such filings, as soon as reasonably practicable after each is electronically filed with, or furnished to, the U.S. Securities and Exchange Commission, or the SEC.

In addition, you may review a copy of this Annual Report on Form 10-K, including exhibits and any schedule filed herewith, and obtain copies of such materials at prescribed rates, at the SEC’s Public Reference Room at 100 F Street, N.E., Washington, D.C. 20549. You may obtain information on the operation of the Public Reference Room by calling the SEC at 1-800-SEC-0330. The SEC maintains a website (http://www.sec.gov) that contains reports, proxy and information statements and other information regarding registrants, including the Company, that file electronically with the SEC.

Item 1a.Risk Factors

This Annual Report on Form 10-K contains forward-looking statements that involve risks and uncertainties. The occurrence of any of the following risks described below and elsewhere in this document, including the risk that our actual results may differ materially from those anticipated in these forward-looking statements, could materially adversely affect our business, financial condition, operating results or prospects and the trading price of our securities. Additional risks and uncertainties that we do not presently know or that we currently deem immaterial may also harm our business, financial condition, operating results and prospects and the trading price of our securities.

Factors Affecting Our Operating Results and Financial Condition

IfWe expect that we are unable to generate significant product revenues from the sale of PIXUVRI, we may never become profitable.

We anticipate that, for at least the next several years, our ability to generate revenues and become profitable will depend in large part on the commercial success of our only marketed product candidate, PIXUVRI. One of the priorities of our business strategy is to successfully execute the commercial launch of PIXUVRI in Europe. PIXUVRI is not approved for marketing in the United States. In September 2012, we began making PIXUVRI available for commercial sale in the E.U. PIXUVRI is currently available in eight countries: Austria, Denmark, Finland, Germany, Netherlands, Norway, Sweden and the United Kingdom. We plan to extend the availability of PIXUVRI to France, Italy and Spain, as well as other European countries, in 2013; however, we may not be able to successfully commercialize PIXUVRI in Europe as planned. Our ability to successfully commercialize PIXUVRI will depend on several factors, including, without limitation, our ability to:

successfully increase and maintain market demand for, and sales of, PIXUVRI in Europe through our sales and marketing efforts and by expanding our sales force;

obtain greater acceptance of PIXUVRI by physicians and patients;

obtain favorable reimbursement rates for PIXUVRI in Europe;

maintain compliance with regulatory requirements;

obtain a renewal annually of our conditional marketing authorization for PIXUVRI in the E.U. and complete a post-marketing study of PIXUVRI aimed at confirming the clinical benefit previously observed in PIXUVRI;

establish and maintain agreements with wholesalers and distributors on commercially reasonable terms;

maintain commercial manufacturing arrangements with third-party manufacturers as necessary to meet commercial demand for PIXUVRI, continue to manufacture commercial quantities at acceptable cost levels and build our distribution, managerial and other non-technical capabilities;

successfully maintain intellectual property protection for PIXUVRI;

compete with other pharmaceutical and biotechnology companies to recruit, hire, train and retain sales and marketing personnel; and

successfully develop our own commercial organization to market PIXUVRI.

We currently have limited resources and the continued development of a commercial organization to market PIXUVRI will be expensive and time-consuming. Our subsidiary CTI Life Sciences Limited, or CTILS, has entered into a services agreement with Quintiles Commercial Europe Limited, or Quintiles, whereby CTILS has engaged Quintiles to provide a variety of services, which may include, market access services, promotion and detailing services, strategic planning, project management, pricing and reimbursement support, pharmacovigilance, medical information and other regulatory services and consultancy advice to CTILS and affiliates in relation to the commercialization of PIXUVRI in Europe. Because we rely on third parties for the manufacture, distribution and marketing and sale of PIXUVRI, we may have limited control over the efforts of these third parties and we may receive less revenue than if we commercialized these products ourselves. In the event we are unable to successfully develop our own commercial organization or collaborate with third-party organizations, we may not be able to successfully commercialize or generate meaningful sales from PIXUVRI or other product candidates. As a result, we may be unable to generate sufficient revenues to grow or sustain our business and we may never become profitable, and our business, financial condition, operating results and prospects and the trading price of our securities could be harmed.

We need to continue to raise additional financing to operate,develop our business, but additional funds may not be available on acceptable terms, or at all. Any inability to raise required capital when needed could impair our ability to make our contractually obligated payments and harm our liquidity, financial condition, business, operating results and prospects.

We have substantial operating expenses associated with the development of our product candidates.candidates and the commercialization of PIXUVRI, and we have significant contractual payment obligations. Our available cash and cash equivalents were $50.4$71.6 million as of December 31, 2012.2013. At our currently planned spending rate, we believe that our present financial resources, in additiontogether with pacritinib milestone payments projected to be earned and received over the course of 2014 and 2015 under our collaboration with Baxter and expected receiptsEuropean sales from European PIXUVRI, sales, will be sufficient to fund our operations into the fourththird quarter of 2013.2015. Cash forecasts and capital requirements are subject to change as a result of a variety of risks and uncertainties. Changes in manufacturing, clinical trial expenses, andany expansion of our sales and marketing organization in Europe and other unplanned business developments may consume capital resources earlier than planned. Additionally, we may not receive the country reimbursement ratesanticipated pacritinib milestone payments or sales from PIXUVRI. Due to these and other factors, our forecast for the period for which we will have sufficient resources to fund our operations, as well as any other operational or business projection we have disclosed, or may, from time to time, disclose, may fail.

We have $15.0 million outstanding under our senior secured term loan agreement. We are required to make monthly interest payments of approximately $158,000, and commencing May 1, 2014 through October 1, 2016, we will be required to make monthly interest plus principal payments in Europe for PIXUVRIthe aggregate amount of approximately $584,000. The loan agreement also requires us to comply with restrictive covenants, including those that we currently assumelimit our operating flexibility and ability to borrow additional funds. A failure to make a required loan payment or an uncured covenant breach could lead to an event of default, and in planning for 2013such case, all amounts then outstanding may become due and 2014.payable immediately.

We expect that we will need to raiseacquire additional funds andin order to develop our business, including in the event our costs are currently exploring alternative sources of debt and other non-dilutive capital.greater than anticipated or our cash inflow projections fail, or in the event we seek to expand our operations. We may seek to raise such capital through equity or debt financings, partnerships, collaborations, joint ventures, disposition of assets or other sources, but our ability to do so is subject to a number of risks and uncertainties, including:

 

our ability to raise capital through the issuance of additional shares of our common stock or otherconvertible securities convertible into common stock is restricted by the limited number of our residual authorized shares, available for issuance, the difficulty of obtaining shareholder approval to increase the authorized number of shares, and the restrictive covenants of our credit facility;senior secured term loan agreement;

 

issuance of equity securities or securities convertible into our equity securities will dilute the proportionate ownership of existing shareholders;

 

our ability to raise debt capital may beis limited by the termsour existing senior secured term loan agreement;

some of any future indebtedness, and any such indebtednessarrangements may include restrictive covenants that limit our operating flexibility;

arrangements that require us to relinquish rights to certain technologies, drug candidates, products and/or potential markets;assets; and

 

we may be required to meet additional regulatory requirements, in the European Union (including Italy) and the United States and we may be subject to certain contractual limitations, which may increase our costs and harm our ability to obtain additional funding.

However, additionalAdditional funding may not be available on favorable terms or at all. If we fail to obtain additional capital when needed, we may be required to delay, scale back or eliminate some or all of our research and

development programs, as well as reduce our selling, general and administrative expenses and/or refrain from making our contractually required payments when due, which could materially harm our business, financial condition, operating results and prospects.

We may continue to incur net losses, and we may never achieve profitability.

We were incorporated in 1991 and have incurred a net operating loss every year since our formation. As of December 31, 2012,2013, we had an accumulated deficit of $1.8$1.9 billion. We are pursuing regulatory approvalapprovals for PIXUVRI, pacritinib, Opaxio, tosedostat and brostallicin.Opaxio. We will need to continue to conduct research, development, testing and regulatory compliance activities and undertakeprocure manufacturing and drug supply activitiesservices, the costs of which, together with projected general and administrative expenses, may result in operating losses for the foreseeable future. There can be no assurances that we will ever achieve profitability.

If our collaboration with Baxter with respect to pacritinib or any other collaboration for our products or product candidates is not successful, or if we are unable to enter into additional collaborations, we may not be able to effectively develop and/or commercialize the applicable product(s), which could have a material adverse effect on our business.

Under the Baxter Agreement, we rely heavily on Baxter to collaborate with us in respect of the development and global commercialization of our lead product candidate, pacritinib. As a result of our dependence on our relationship with Baxter, the eventual success or commercial viability of pacritinib is, to a certain extent, beyond our control. We are subject to a number of specific risks associated with our dependence on our collaborative relationship with Baxter, including: possible disagreements between Baxter and us as to the timing, nature and extent of our development plans, including clinical trials or regulatory approval strategy; changes in personnel at Baxter who are key to the collaboration efforts; any changes in Baxter’s business strategy adverse to our interests; and possible disagreements with Baxter regarding ownership of proprietary rights. Furthermore, the contingent financial returns under our collaboration with Baxter depend in large part on the achievement of development and commercialization milestones, plus a share of revenues from any sales. Therefore, our success, and any associated future financial returns to us and our investors, will depend in large in part on the performance of both Baxter and us under the Baxter Agreement.

The continued development of our other product candidates also depends on our ability to enter into and/or maintain collaborations. We have entered into a third-party service provider agreement with Quintiles Commercial Europe Limited, or Quintiles, whereby Quintiles provides a variety of services related to the commercialization of PIXUVRI in Europe. We are also pursuing potential partners for commercializing PIXUVRI in other markets outside of the U.S. and our current target E.U. markets discussed in Part II, Item 7, “Management’s Discussion and Analysis of Financial Condition and Results of Operations.” Because we rely on third parties to manufacture, distribute, and market and sell PIXUVRI, we have limited control over the efforts of these third parties, and we may receive less revenue than if we commercialized PIXUVRI ourselves. We are also a party to other agreements with third parties for our product candidates, including an agreement with the GOG, to perform a Phase 3 trial of Opaxio in patients with ovarian cancer.

If we fail to enter into additional collaborative arrangements or to maintain existing or future arrangements and service provider relationships, we may be unable to further develop and commercialize product candidates, generate revenues to grow, sustain our business or achieve profitability, which would harm our business, financial condition, operating results and prospects.

Our clinical trials may take longer to complete than expected, or they may not be completed at all.

Our business is dependent on our ability, and to the extent applicable, the ability of our collaboration partners and other third parties (such as cooperative groups and ISTs), to successfully undertake extensive clinical testing on humans to demonstrate to the satisfaction of the applicable regulatory authority the safety and efficacy of the product for its intended use. For example, our ability to develop pacritinib depends on the successful completion of two Phase 3 trials, one of which initiated in January 2013 and the second of which opened for enrollment in March 2014. Preclinical and clinical data can be interpreted in different ways, which could delay, limit or prevent regulatory approval. Negative or inconclusive results or adverse medical events during a clinical trial could delay, limit or prevent regulatory approval. We forecast the commencement and completion of clinical trials for planning purposes, but actual commencement or completion may take longer than planned or not be completed at all due to a number of reasons, including:

we may not obtain authorization to permit product candidates that are already in the preclinical development phase to enter the human clinical testing phase;

the FDA, the EMA or other regulatory authority may object to proposed protocols or could place a partial or full hold on any clinical trial at any time;

there may be shortages of available product supplies or the materials that are used to manufacture the products or the quality or stability of the product candidates may fall below acceptable standards;

authorized preclinical or clinical testing may require significantly more time, resources or expertise than originally expected to be necessary;

clinical testing may not show potential products to be safe and efficacious for the specific indication for which they are tested and, as with many drugs, may fail to demonstrate the desired safety and efficacy characteristics in human clinical trials;

the results from preclinical studies and early clinical trials may not be indicative of the results that will be obtained in later-stage clinical trials;

inadequate financing to complete a clinical trial;

we, or to the extent applicable, our collaboration partners, or regulatory authorities may suspend clinical trials at any time on the basis that the participants are being exposed to unacceptable health risks or for other reasons; and

the rates of patient recruitment and enrollment of patients who meet trial eligibility criteria may be lower than anticipated as a result of factors, such as the number of patients with the relevant conditions, the nature of the clinical testing, the proximity of patients to clinical testing centers, the eligibility criteria for tests as well as competition with other clinical testing programs involving the same patient profile but different treatments.

In addition, the failure of third parties, including, where applicable, contract research organizations, academic institutions, collaborators, cooperative groups and/or investigator sponsors, to conduct, oversee and monitor clinical trials, as well as to process clinical results, manage test requests and meet applicable standards, can affect the timing and outcome of the applicable trials. In particular, the clinical trials currently underway for tosedostat and Opaxio are being conducted as cooperative group trials and ISTs, and as such, are not under our control.

A delay in, or failure to commence or complete, any present or planned clinical trials, or the need to perform more or larger clinical trials than planned, could result in an increase in development costs, which could harm our ability to commercialize our product candidates, and our business, financial condition, operating results or prospects.

Products that appear promising in research and development may be delayed or fail to reach later stages of development or the market.

The successful development of anti-cancer drugs and other pharmaceutical products is highly uncertain, and obtaining regulatory approval to market drugs to treat cancer is expensive, difficult and speculative. A number of companies in the pharmaceutical industry, including us, have suffered significant setbacks in advanced clinical trials, even after reporting promising results in earlier trials. For example, our Phase 3 clinical trials for Opaxio for the treatment of non-small cell lung cancer failed to meet their primary endpoints. In addition, in June 2013, the FDA implemented a partial clinical hold on tosedostat, which prevented new patients from entering any ongoing tosedostat clinical trials. This hold was lifted in December 2013.

Products that appear promising in research and development may be delayed or fail to reach later stages of development or the market for several reasons, including:

preclinical or clinical trial results may show the product to be less effective than desired or to have harmful or problematic side effects;

failure to receive the necessary U.S. and international regulatory approvals or a delay in receiving such approvals;

difficulties in formulating the product, scaling the manufacturing process or getting approval for manufacturing;

manufacturing costs, pricing, reimbursement issues or other factors may make the product uneconomical to commercialize;

any problem in the production of our products, such as the inability of a supplier to provide raw materials or supplies used to manufacture our products, equipment obsolescence, malfunctions or failures, product quality or contamination problems, or changes in regulatory requirements or standards that require modifications to our manufacturing process;

the product candidate may not be cost effective compared to alternative treatments; or

other companies or people have or may have proprietary rights to a product candidate, such as patent rights, and will not let the product candidate be sold on reasonable terms, or at all.

If the development of our product candidates is delayed, our development costs may increase, the product may not reach later stages of development and/or the ability to commercialize our product candidates may be harmed, which could harm our business, financial condition, operating results or prospects.

We or our collaboration partners may not obtain or maintain the regulatory approvals required to commercialize some or all of our products.

We are subject to rigorous and extensive regulation by the FDA in the U.S. and by comparable agencies in other states and countries, including the EMA in the E.U. Pacritinib and all of our other compounds are currently in research or development and, other than conditional marketing authorization for PIXUVRI in the E.U., we have not received marketing approval for these other compounds or FDA marketing approval of PIXUVRI (and we are not currently pursuing FDA marketing approval of PIXUVRI). Information about the status of the regulatory approval of PIXUVRI, pacritinib, tosedostat and Opaxio can be found in Part II, Item 7, “Management’s Discussion and Analysis of Financial Condition and Results of Operations” and is incorporated by reference herein. Our products may not be marketed in the U.S. until they have been approved by the FDA and may not be marketed in other countries until they have received approval from the appropriate agencies. Each product candidate requires significant research, development and preclinical testing and extensive clinical investigation before submission of any regulatory application for marketing approval. Obtaining regulatory approval requires substantial time, effort and financial resources, and we may not be able to obtain approval of any of our products on a timely basis, or at all. The number and focus of preclinical and clinical trials that will be

required for approval by the FDA, the EMA or any other foreign regulatory agency varies depending on the drug candidate, the disease or condition that the drug candidate is designed to address and the regulations applicable to any particular drug candidate. Preclinical and clinical data can be interpreted in different ways, which could delay, limit or preclude regulatory approval. The FDA, the EMA and other foreign regulatory agencies can delay, limit or deny approval of a drug candidate for many reasons, including, but not limited to:

a drug candidate may not be shown to be safe or effective;

a clinical trial results in negative or inconclusive results or adverse medical events occur during a clinical trial;

they may not approve the manufacturing process of a drug candidate;

they may interpret data from pre-clinical and clinical trials in different ways than we do;

a drug candidate may fail to comply with regulatory requirements; or

they might change their approval policies or adopt new regulations.

Any delay or failure by us to obtain regulatory approvals of our products could adversely affect the marketing of our products. If our products are not approved quickly enough to provide net revenues to defray our operating expenses, our business, financial condition and operating results will be harmed.

Even if our drug candidates are successful in clinical trials and receive regulatory approvals, we or our collaboration partners may not be able to successfully commercialize them.

Pacritinib, Opaxio and tosedostat are currently in clinical trials; the development and clinical trials of these products may not be successful and, even if they are, such products may never be successfully developed into commercial products. Even if our products are successful in clinical trials or in obtaining other regulatory approvals, our products (even those that have been granted conditional marketing authorization, such as PIXUVRI) may not reach the market for a number of reasons including:

they may be found ineffective or cause harmful side effects;

they may be difficult to manufacture on a scale necessary for commercialization;

they may be uneconomical to produce;

we may fail to obtain reimbursement amount approvals or pricing that is cost effective for patients as compared to other available forms of treatment;

they may not compete effectively with existing or future alternatives to our products;

we are unable to sell marketing rights or develop commercial operations;

they may fail to achieve market acceptance; or

we may be precluded from commercialization of our products by proprietary rights of third parties.

In particular, with respect to the future potential commercialization of pacritinib, we will be heavily dependent on our collaboration partner, Baxter. Under the terms of our agreement, Baxter has exclusive commercialization rights for all indications for pacritinib outside the U.S., while Baxter and CTI share commercialization rights in the U.S.

The failure of Baxter (or any other applicable collaboration partner) to fulfill its commercialization obligations with respect to a product, or the occurrence of any of the events itemized in the foregoing list, could adversely affect the commercialization of our products. If we fail to commercialize products or if our future products do not achieve significant market acceptance, we will not likely generate significant revenues or become profitable.

If users of our products are unable to obtain adequate reimbursement from third party payers, market acceptance of our products may be limited and we may not achieve anticipated revenues.

To the extent our products are successfully introduced to market, they may not be considered cost-effective and third-party or government reimbursement might not be available or sufficient. Governmental and other third-party payors continue to attempt to contain healthcare costs by strictly controlling, directly or indirectly, pricing and reimbursement, and we expect pressures on pricing and reimbursement from both governments and private payers inside and outside the U.S. to continue. In almost all European markets, pricing and choice of prescription pharmaceuticals are subject to governmental control. Therefore, the price of our products and their reimbursement in Europe is and will be determined by national regulatory authorities. A variety of factors are considered in making reimbursement decisions, including whether there is sufficient evidence to show that treatment with the product is more effective than current treatments, that the product represents good value for money for the health service it provides and that treatment with the product works at least as well as currently available treatments. Reimbursement decisions from any of the European markets may impact reimbursement decisions in other European markets. The continuing efforts of government and insurance companies, health maintenance organizations and other payers of healthcare costs to contain or reduce costs of health care may affect our future revenues and profitability, and the future revenues and profitability of our potential customers, suppliers and collaborative partners and the availability of capital.

We may never be able to generate significant product revenues from the sale of PIXUVRI.

We anticipate that, for at least the next several years, our ability to generate revenues and become profitable even if we are ablewill depend on the commercial success in Europe of our only marketed product candidate, PIXUVRI. PIXUVRI is not approved for marketing in the U.S. PIXUVRI is available to healthcare providers in certain countries in the E.U. See Part II, Item 7, “Management’s Discussion and Analysis of Financial Condition and Results of Operations” for a discussion of the reimbursement status in the applicable E.U. countries. However, our ability to continue to commercialize PIXUVRI orin Europe will depend on our ability to obtain an annual renewal of our conditional marketing authorization for PIXUVRI in the E.U. and to timely complete the post-marketing study of PIXUVRI aimed at confirming the clinical benefit previously observed in PIXUVRI. A failure of such study could result in a cessation of commercialization of PIXUVRI in the E.U.

In addition, the successful commercialization of PIXUVRI in the E.U. depends heavily on our ability to obtain and maintain favorable reimbursement rates for users of PIXUVRI, as well as on various additional factors, including, without limitation, our ability to:

increase and maintain demand for and sales of PIXUVRI in Europe and obtain greater acceptance of PIXUVRI by physicians and patients;

establish and maintain agreements with wholesalers and distributors on reasonable terms;

maintain, and enter into additional, commercial manufacturing arrangements with third-parties, cost-effectively manufacture necessary quantities and build distribution, managerial and other products currentlycapabilities; and

further develop and maintain a commercial organization to market PIXUVRI.

If we are unable to successfully commercialize PIXUVRI in development or otherwise.Europe as planned, our business, financial condition, operating results and prospects could be harmed.

We have in the past received and may in the future receive audit reports with an explanatory paragraph on our consolidated financial statements.

Our independent registered public accounting firm included an explanatory paragraph in its reports on our consolidated financial statements for each of the years ended December 31, 2007 through December 31, 2011 regarding their substantial doubt as to our ability to continue as a going concern. Although our independent registered public accounting firm removed this going concern explanatory paragraph in its report on our

December 31, 2012 consolidated financial statements, we expect to continue to need to raise additional financing to funddevelop our operationsbusiness and satisfy obligations as they become due. The inclusion of a going concern explanatory paragraph in future years may negatively impact the trading price of our common stock and make it more difficult, time consuming or expensive to obtain necessary financing, and we cannot guarantee that we will not receive such an explanatory paragraph in the future.

We may not be able to maintain our listings on The NASDAQ Capital Market and the Mercato Telematico Azionario stock marketMTA in Italy, or the MTA, or trading on these exchanges may otherwise be halted or suspended, which may make it more difficult for investors to sell shares of our common stock.

Maintaining the listing of our common stock on The NASDAQ Capital Market requires that we comply with certain listing requirements. We have in the past and may in the future fail to continue to meet one or more listing requirements. For example, in June 2012, we received a notification from The NASDAQ Stock Market LLC, or NASDAQ, indicating non-compliance with the requirement to maintain a minimum closing bid price of $1.00 per share and that we would be delisted if we did not timely regain compliance prior to the expiration of a 180 day grace period.compliance. We regained compliance through a reverse stock split in September 2012, but we could fail to meet the continued listing requirements as a result of a decrease in our stock price or otherwise.

If our common stock ceases to be listed for trading on The NASDAQ Capital Market for any reason, it may harm our stock price, increase the volatility of our stock price, decrease the level of trading activity and make it more difficult for investors to buy or sell shares of our common stock. Our failure to maintain a listing on The NASDAQ Capital Market may constitute an event of default under our senior secured term loan and any future indebtedness, which would accelerate the maturity date of such future debt or trigger other obligations. In addition, certain institutional investors that are not permitted to own securities of non-listed companies may be required to sell their shares adversely affecting the trading price of our common stock. If we are not listed on The NASDAQ Capital Market or if our public float falls below $75 million, we will be limited in our ability to file new shelf registration statements on SEC Form S-3 and/or to fully use one or more registration statements on SEC Form S-3. We have relied significantly on shelf registration statements on SEC Form S-3 for most of our financings in recent years, so any such limitations may harm our ability to raise the capital we need. Delisting from The NASDAQ Capital Market could also affect our ability to maintain our listing or trading on the Borsa Italiana.MTA. Trading in our common stock has been halted or suspended on both The NASDAQ Capital Market and Borsa ItalianaMTA in the past and may also be halted or suspended in the future due to market or trading conditions at the discretion of The NASDAQ Stock Market LLC, the Commissione Nazionale per le Società e la

Borsa, or “CONSOB”CONSOB (which is the public authority responsible for regulating the Italian securities markets), or the Borsa Italiana (which ensures the development of the managed markets in Italy). Any halt or suspension in the trading in our common stock may negatively impact the trading price of our common stock.

We may be unable to obtain a quorum for meetings of our shareholders or obtain necessary shareholder approvals and therefore be unable to take certain corporate actions.

Our articles of incorporation require that a quorum, generally consisting of one-third of the outstanding shares of voting stock, be represented in person, by telephone or by proxy in order to transact business at a meeting of our shareholders. In addition, amendments to our articles of incorporation, such as an amendment to increase our authorized capital stock, generally require the approval of a majority of our outstanding shares. Failure to meet a quorum or obtain shareholder approval can prevent us from raising capital through equity financing or otherwise taking certain actions that may be in the best interest of the company and shareholders.

A substantial majority of our common shares are held by Italian institutions and, under Italian laws and regulations, it is difficult to communicate with the beneficial holders of those shares to obtain votes. In 2006, we were unable to obtain a quorum at two scheduled annual meetings. Following that failure to obtain a quorum, we contacted certain depository banks in Italy where significant numbers of shares of our common stock were held and asked them to cooperate by making a book-entry transfer of their share positions at Monte Titoli to their U.S.

correspondent bank, who would then transfer the shares to an account of the Italian bank at a U.S. broker-dealer that is an affiliate of that bank. Certain of the banks contacted agreed to make the share transfer pursuant to these arrangements as of the record date of the meeting, subject to the relevant beneficial owner being given notice before such record date and taking no action to direct the voting of such shares. Obtaining a quorum at future meetings and obtaining necessary shareholder approvals at shareholder meetings will depend in part upon the willingness of the Italian depository banks to continue participating in the custody transfer arrangements, and we cannot be assured that those banks that have participated in the past will continue to participate in custody transfer arrangements in the future.

As a result of the foregoing, we may be unable to obtain a quorum or shareholder approval of proposals, when needed, at future annual or special meetings of shareholders or obtain shareholder approval of proposals when needed.

shareholders. Even if we are able to obtain a quorum at our shareholder meetings, we may not obtain enough votes to approve matters to be resolved upon at those meetings. For example, a proposal to approve a reverse stock split failed to receive sufficient votes to pass at the March 2009 shareholders meeting. Moreover, under Rule 452 of the New York Stock Exchange, or Rule 452, the U.S. broker-dealer may only vote shares absent direction from the beneficial owner on certain specified “routine” matters, such as certain amendments to our articles of incorporation to increase authorized shares that are to be used for general corporate purposes and the ratification of our auditors. If our shareholders do not instruct their brokers on how to vote their shares on “non-routine” matters, then we may not obtain the necessary number of votes for approval. “Non-routine” matters include, for example, proposals that relate to the authorization or creation of indebtedness or preferred stock. Revisions to Rule 452 that further limit matters for which broker discretionary voting is allowed, such as the revisions imposed in August 2010 by the Dodd-Frank Wall Street Reform and Consumer Protection Act to prohibit broker discretionary voting on matters related to executive compensation and in the election of directors, may further harm our abilityAny failure to obtain a quorum and shareholder approval of certain matters. Therefore it is possible that even if we are able to obtainor the requisite vote on a quorum for our meetings of the shareholders we still may not receive enough votes to approve proxy proposals presented at such meeting and, depending on the proposal in question including if a proposal is submitted to our shareholders to increase the number of authorized shares of common stock, such failure could harm us.

We could fail in financing efforts or be delisted from NASDAQ if we fail to receive shareholder approval when needed.

We are required under the NASDAQ Marketplace Rules to obtain shareholder approval for any issuance of additional equity securities that would comprise more than 20%20 percent of the total shares of our common stock

outstanding before the issuance of such securities sold at a discount to the greater of book or market value in an offering that is not deemed to be a “public offering” by the NASDAQ Marketplace Rules or NASDAQ. NASDAQ Marketplace Rules also require shareholder approval if an issuance would result in a change of control as definedwell as under the NASDAQ Marketplace Rules andcertain other circumstances. We have in the past and may in the future issue additional equity securities that would comprise more than 20%20 percent of the total shares of our common stock outstanding in order to fund our operations. However, we might not be successful in obtaining the required shareholder approval for any future issuance that requires shareholder approval pursuant to the NASDAQ Marketplace Rules, particularly in light of the difficulties we have experienced in obtaining a quorum and holding shareholder meetings discussed above. If we are unable to in the future, obtain financing due to shareholder approval difficulties, such failure may harm our ability to continue operations.

We are subject to limitations on our ability to issue additional shares of our common stock or undertake other business initiatives due to Italian regulatory requirements.

Compliance with Italian regulatory requirements may delay additional issuances of our common stock or other business initiatives. Under Italian law, we must publish a registration document, securities note and summary that have to be approved by CONSOB prior to issuing common stock that exceeds, in any twelve-month period, 10%10 percent of the number of shares of our common stock outstanding at the beginning of that period, subject to certain exceptions. If we are unable to obtain and maintain a registration document, securities note or summary to cover general financing efforts under Italian law, we may be required to raise money using alternative forms of securities. For example, we may need to usehave in the past issued convertible preferred stock and may in the future issue convertible debt sincesecurities because the common stock resulting from the conversion of such securities, subject to the current provisions of European Directive No. 71/2003 and, according to the current interpretations of the Committee of European Securities Regulators, is not subject to the 10%10 percent limitation imposed by E.U. and Italian law. However, there can be no assurance that these exceptionsany changes to the registration document requirement are not changed from timeItalian regulatory requirements, exemptions or interpretations may increase compliance costs or limit our ability to time.issue securities.

We are subject to Italian regulatory requirements, which could result in administrative and other challenges and additional expenses.

Because our common stock is traded on the MTA, we are required to also comply with the rules and regulations of CONSOB and the Borsa Italiana, which regulate companies listed on Italy’s public markets. Compliance with these regulations and responding to periodic information requests from Borsa Italiana and CONSOB requires us to devote additional time and resources to regulatory compliance matters and to incur

additional expenseexpenses of engaging additional outside counsel, accountants and other professional advisors. Actual or alleged failure to comply with Italian regulators can also subject us to regulatory investigations. For more information on current investigations, see the regulatory investigations that are discussed in more detail in Part I, Item 3, “Legal Proceedings.”

We will incur a variety of costs for and may never realize the anticipated benefits of any acquisitions we may make, including our acquisition of pacritinib.acquisitions.

We evaluate and acquire assets and technologies from time to time. If appropriate opportunities become available, we may attempt to acquire other businesses and assets that we believe are a strategic fit with our business. The process of negotiating an acquisition and integrating an acquired business and assets including the acquisition of pacritinib, may result in operating difficulties and expenditures. In addition, our acquisitions may require significant management attention that would otherwise be available for ongoing development of our business, whether or not any such transaction is ever consummated. Moreover, we may never realize the anticipated benefits of any acquisition, including the acquisition of pacritinib.acquisition. Any additional acquisitions could result in potentially dilutive issuances of equity securities, the incurrence of debt, contingent liabilities and/or amortization expenses related to intangible assets, which could harm our business, financial condition, operating results and prospects and the trading prices of our securities.or prospects.

We may owe additional amounts for value added taxes related to our operations in Europe.

Our European operations are subject to value added tax, or VAT, which is usually applied to all goods and services purchased and sold throughout Europe. The VAT receivable was $8.1$5.7 million and $5.0$8.1 million as of December 31, 20122013 and 2011,December 31, 2012, respectively. On April 14, 2009, December 21, 2009 and June 25, 2010, the Italian Tax Authority, or the ITA, issued notices of assessment to Cell Therapeutics Inc. – Sede Secondaria, or CTI (Europe), based on the ITA’s audit of CTI (Europe)’s VAT returns for the years 2003, 2005, and 2006 and 2007. The ITA audits concluded that CTI (Europe) did not collect and remit VAT on certain invoices issued to non-Italian clients for services performed by CTI (Europe). The assessments, including interest and penalties, for the years 2003, 2005, 2006 and 2007 are €0.5 million, €5.5 million, €2.5 million and €0.8 million, or approximately $0.7 million, $7.2 million, $3.3 million and $1.1 million converted using the currency exchange rate as of December 31, 2012, respectively. We believe that the services invoiced were non-VAT taxable consultancy services and that the VAT returnsmillion. While we are correct as originally filed. We are vigorously defending ourselves against the assessments both on procedural grounds and on the merits of the case.case, there can be no assurances that we will be successful in such defense. Further information pertaining to these cases can be found in Part I, Item 3, “Legal Proceedings” and is incorporated by reference herein. If the final decision of lower tax courts (i.e. the Provincial Tax Court or the Regional Tax Court) or of the Supreme Court is unfavourableunfavorable to us, or if, in the interim, the ITA were to make a demand for payment and we were to be unsuccessful in suspending collection efforts, we may be requested to pay to the ITA an amount up to €9.4 million (or approximately $12.4$12.9 million converted using the currency exchange rate as of December 31, 2012)2013) plus collection fees, notification expenses and additional interest for the period lapsed between the date in which the assessments were issued and the date of effective payment. Further information pertaining to these cases can be found in this Annual Report on Form 10-K under Item 3 “Legal Proceedings” and is incorporated by reference herein.

We may not realize any royalties, milestone payments or other benefits under the License and Co-Development Agreement entered into with Novartis Pharmaceutical Company Ltd.

We have entered into a license and co-development agreement related to Opaxio and PIXUVRI with Novartis pursuant to which Novartis received an exclusive worldwide license for the development and commercialization of Opaxio and an option to enter into an exclusive worldwide license to develop and commercialize PIXUVRI. We will not receive any royalty or milestone payments under this agreement unless Novartis exercises its option related to PIXUVRI and we are able to reach a definitive agreement or Novartis elects to participate in the development and commercialization of Opaxio. Novartis is under no obligation to make such election and enter into a definitive license agreement or exercise such right and may never do so. In addition, even if Novartis exercises such rights, any royalties and milestone payments we may be eligible to receive from Novartis are subject to the receipt of the necessary regulatory approvals and the attainment of certain sales levels. In the event Novartis does not elect to participate in the development of Opaxio or PIXUVRI, we may not be able to find another suitable partner for the commercialization and development of those products, which may have an adverse effect on our ability to bring those drugs to market. In addition, we would need to obtain a release from Novartis prior to entering into any agreement to develop and commercialize PIXUVRI or Opaxio with a third party. We may never receive the necessary regulatory approvals and our products may not reach the necessary sales levels to generate royalty or milestone payments even if Novartis elects to exercise its option with regard to PIXUVRI and enter into a definitive license agreement or to participate in the development and commercialization of Opaxio. In addition, the agreement imposes restrictions on activities relating to the development and commercialization of PIXUVRI and any actual or alleged failure to comply with the terms of the agreement could result in potential damage claims, legal expenses, loss of rights under the agreement or termination of the agreement. Novartis has the right under the agreement in its sole discretion to terminate such agreement at any time upon written notice to us.

Products that appear promising in research and development may be delayed or fail to reach later stages of development or the market.

The successful development of pharmaceutical products is highly uncertain and obtaining regulatory approval to market drugs to treat cancer is expensive, difficult and risky. Products that appear promising in research and development may be delayed or fail to reach later stages of development or the market for several reasons, including:

preclinical tests may show the product to be toxic or lack efficacy in animal models;

clinical trial results may show the product to be less effective than desired or to have harmful or problematic side effects;

failure to receive the necessary U.S. and international regulatory approvals or a delay in receiving such approvals;

difficulties in formulating the product, scaling the manufacturing process or getting approval for manufacturing;

manufacturing costs, pricing, reimbursement issues or other factors may make the product uneconomical to commercialize;

the product candidate is not cost effective in light of existing therapeutics; or

other companies or people have or may have proprietary rights to a product candidate, such as patent rights, and will not let the product candidate be sold on reasonable terms, or at all.

Preclinical and clinical data can be interpreted in different ways, which could delay, limit or prevent regulatory approval. Negative or inconclusive results or adverse medical events during a clinical trial could delay, limit or prevent regulatory approval. In addition, any significant problem in the production of our products, such as the inability of a supplier to provide raw materials or supplies used to manufacture our products, equipment obsolescence, malfunctions or failures, product quality or contamination problems, or changes in regulatory requirements or standards that require modifications to our manufacturing process could delay, limit or prevent regulatory approval which could harm our business, financial condition and results or the trading price of our securities. There can be no assurance as to whether or when we will receive regulatory approvals for our products.

We may take longer to complete our clinical trials than we expect, or we may not be able to complete them at all.

Before regulatory approval for any potential product can be obtained, we must undertake extensive clinical testing on humans to demonstrate to the satisfaction of the applicable regulatory authority the safety and efficacy of the product for its intended use. We forecast the commencement and completion of clinical trials for planning purposes, but actual commencement or completion may not occur as forecasted or planned due to a number of reasons, including:

we may not obtain authorization to permit product candidates that are already in the preclinical development phase to enter the human clinical testing phase;

the FDA, the EMA or other regulatory authority may object to proposed protocols;

there may be shortages of available product supplies or the materials that are used to manufacture the products or the quality or stability of the product candidates may fall below acceptable standards;

authorized preclinical or clinical testing may require significantly more time, resources or expertise than originally expected to be necessary;

clinical testing may not show potential products to be safe and efficacious for the specific indication for which they are tested and, as with many drugs, may fail to demonstrate the desired safety and efficacy characteristics in human clinical trials;

the results from preclinical studies and early clinical trials may not be indicative of the results that will be obtained in later-stage clinical trials;

inadequate financing to complete a clinical trial;

we or regulatory authorities may suspend clinical trials at any time on the basis that the participants are being exposed to unacceptable health risks or for other reasons;

the failure of third parties, such as contract research organizations, academic institutions and/or cooperative groups, to conduct, oversee and monitor clinical trials as well as to process the clinical results and manage test requests, to perform or to meet applicable standards; and

the rates of patient recruitment and enrollment of patients who meet trial eligibility criteria may be lower than anticipated as a result of factors, such as the number of patients with the relevant conditions, the nature of the clinical testing, the proximity of patients to clinical testing centers, the eligibility criteria for tests as well as competition with other clinical testing programs involving the same patient profile but different treatments.

If we fail to commence or complete, or experience delays in, any of our present or planned clinical trials or need to perform more or larger clinical trials than planned, our development costs may increase and/or our ability to commercialize our product candidates may be harmed. If delays or costs are significant, our financial results and our ability to commercialize our product candidates may be harmed.

We may not obtain or maintain the regulatory approvals required to commercialize some or all of our products.

We are subject to rigorous and extensive regulation by the FDA in the United States and by comparable agencies in other states and countries, including the EMA in the E.U. All of our other compounds are currently in research or development and, other than conditional marketing authorization for PIXUVRI in the E.U., have not received marketing approval for these other compounds or FDA marketing approval of PIXUVRI. Our products may not be marketed in the United States until they have been approved by the FDA and may not be marketed in other countries until they have received approval from the appropriate agencies. Each product candidate requires significant research, development and preclinical testing and extensive clinical investigation before submission of any regulatory application for marketing approval. Obtaining regulatory approval requires substantial time, effort and financial resources, and we may not be able to obtain approval of any of our products on a timely basis, or at all. The number and focus of preclinical and clinical trials that will be required for approval by the FDA, the EMA or any other foreign regulatory agency varies depending on the drug candidate, the disease or condition that the drug candidate is designed to address and the regulations applicable to any particular drug candidate. Preclinical and clinical data can be interpreted in different ways, which could delay, limit or preclude regulatory approval. The FDA, the EMA and other foreign regulatory agencies can delay, limit or deny approval of a drug candidate for many reasons, including, but not limited to:

a drug candidate may not be shown to be safe or effective;

a clinical trial results in negative or inconclusive results or adverse medical events occur during a clinical trial;

they may not approve the manufacturing process of a drug candidate;

they may interpret data from pre-clinical and clinical trials in different ways than we do; or

they might change their approval policies or adopt new regulations.

Any delay or failure by us to obtain regulatory approvals of our products could diminish competitive advantages that we may attain and could adversely affect the marketing of our products. Each product candidate requires significant research, development and preclinical testing and extensive clinical investigation before submission of any regulatory application for marketing approval. The development of anti-cancer drugs,

including those we are currently developing, is unpredictable and subject to numerous risks. Failure to comply with regulatory requirements could result in various adverse consequences, including possible delay in approval or refusal to approve a product, withdrawal of approved products from the market, product seizures, injunctions, regulatory restrictions on our business and sales activities, monetary penalties, or criminal prosecution. If our products are not approved quickly enough to provide net revenues to defray our operating expenses, our business, financial condition and results of operations will be harmed.

Information about the status of the regulatory approval of PIXUVRI, pacritinib, Opaxio, tosedostat, and brostallicin can be found in this Annual Report on Form 10-K under Item 7 “Management’s Discussion and Analysis of Financial Condition and Results of Operations” and is incorporated by reference herein. Except for conditional marketing authorization of PIXUVRI in Europe, none of our current product candidates have received approval for marketing in any country.

Even if our drug candidates are successful in clinical trials andproducts receive regulatory approvals, we may not be able to successfully commercialize them.

Even if our products are successful in clinical trials and even products that have been granted conditional marketing authorization, such as PIXUVRI, or other regulatory approvals, our products may not reach the market for a number of reasons including that they may:

be found ineffective or cause harmful side effects during preclinical testing or clinical trials;

fail to receive necessary regulatory approvals;

be difficult to manufacture on a scale necessary for commercialization;

be uneconomical to produce;

not compete effectively with existing or future alternatives to our products;

fail to achieve market acceptance; or

be precluded from commercialization by proprietary rights of third parties.

The occurrence of any of these events could adversely affect the commercialization of our products. Products, if introduced, may not be successfully marketed and/or may not achieve customer acceptance. If we fail to commercialize products or if our future products do not achieve significant market acceptance, we will not likely generate significant revenues or become profitable.

Even if regulatory approval, is obtained, we will be subject to ongoing obligations and continued regulatory review by the FDA, the EMA and other foreign regulatory agencies, as applicable, and may be subject to additional post-marketing obligations, all of which may result in significant expense and limit commercialization of our other products, including PIXUVRI.

Even if our other products receive regulatory approvals, we will be subject to numerous regulations and statutes regulating the manner of selling and obtaining reimbursement for those products. Regulatory approvals that we receive for our products may be subject to limitations on the indicated uses for which the product may be marketed or require potentially costly post-marketing follow-up studies. Even if a product receives regulatory approval, we may not be able to maintain compliance with regulatory requirements, which could result in the product being withdrawn from the market, product seizures, injunctions, regulatory restrictions on our business and sales activities, monetary penalties or criminal prosecution. In addition, PIXUVRI is subject to extensive regulatory requirements regarding its labeling, packaging, adverse event reporting, storage, advertising, promotion and record-keeping. If the FDA, the EMA or other foreign regulatory agency approves any of our other products, they will also be subject to similar extensive regulatory requirements. The subsequent discovery of previously unknown problems with PIXUVRI or any of our other products, including adverse events of

unanticipated severity or frequency, or the discovery that adverse effects or unknown toxicities observed in preclinical research or clinical trials that were believed to be minor actually constitute more serious problems, may result in restrictions on the marketing of the product or withdrawal of the drug from the market. If we are

not granted full approval of PIXUVRI in the E.U. or we are unable to renew our conditional marketing authorization for PIXUVRI in the E.U., our business, financial condition, operating results and results of operationsprospects would be harmed.

We cannot predict the outcome of our clinical trial for PIXUVRI or whether our clinical trial for PIXUVRI will serve as either a post-marketing commitment trial or as a pivotal trial.

In March 2011, we initiated a randomized pivotal trial of PIXUVRI for the treatment of relapsed or refractory aggressive B-cell NHL. This clinical trial, referred to as PIX-R, or PIX306, or PIX-R, will comparecompares a combination of PIXUVRI plus rituximab to a combination of gemcitabine plus rituximab in patients who have relapsed after one to three prior regimens for aggressive B-cell NHL and who are not eligible for autologous stem cell transplant. We cannot predict the outcome of PIX-RPIX306 or whether PIX-RPIX306 will serve as either a post-marketing commitment trial or as a pivotal trial. Moreover,We may not be able to demonstrate the FDA may requestclinical benefit of PIXUVRI in patients who had previously received rituximab or that we conductPIXUVRI is more clinically effective than treatments currently used in clinical trials in addition to PIX-R to obtain FDA approval of our NDA for PIXUVRI and we do not know what this trial will cost or how long it would take to execute this study and provide additional information to the FDA.practice. We may not be able to complete the PIX306 clinical trial by June 2015 or at all. If we are unable to submit the clinical trial data from our ongoing randomized Phase 3 clinical trial, PIX306 by June 2015, it may result in the withdrawal of the conditional marketing authorization by the E.U. We may also need to take additional steps to obtain regulatory approval of PIXUVRI. The expense to design and conduct clinical trials are substantial and any additional clinical trials or actions we may need to pursue to obtain approval of PIXUVRI may negatively affect our business, financial condition, andoperating results of operations.or prospects. Failure to meet clinical trial deadlines canmay also result in the withdrawal of our conditional marketing authorization.

If we do not successfully develop our product candidates into marketable products, we may be unable to generate significant revenue or become profitable.

Currently only our product PIXUVRI is approvedauthorization for marketing in the European Union. Pacritinib, Opaxio, tosedostat and brostallicin are currently in clinical trials; the development and clinical trials of these products may not be successful and, even if they are, we may not be successful in developing any of them into a commercial product. For example, our STELLAR Phase 3 clinical trials for Opaxio for the treatment of non-small cell lung cancer failed to meet their primary endpoints. In addition, a number of companies in the pharmaceutical industry, including us, have suffered significant setbacks in advanced clinical trials, even after reporting promising results in earlier trials. We will need to commit significant time and resources to develop these and any additional product candidates. Even if our trials are viewed as successful, we may not get regulatory approval. Our product candidates will be successful only if:

our product candidates are developed to a stage that will enable us to commercialize them or sell related marketing rights to pharmaceutical companies;

we are able to commercialize product candidates in clinical development or sell the marketing rights to third parties; and

our product candidates, if developed, are approved by the regulatory authorities.

We are dependent on the successful completion of these goals in order to generate revenues. The failure to generate such revenues may preclude us from continuing our research and development of these and other product candidates.

We may be delayed, limited or precluded from obtaining regulatory approval of Opaxio as a maintenance therapy for advanced-stage ovarian cancer and as a radiation sensitizer.

We are currently developing Opaxio as a potential maintenance therapy for women with advanced-stage ovarian cancer who achieve a complete remission following first-line therapy with paclitaxel and carboplatin and

as a radiation sensitizer. This Phase 3 clinical trial, or the GOG-0212 trial, is under the control of the Gynecologic Oncology Group, or the GOG, and is expected to enroll 1,100 patients. On January 31, 2013, the Data Safety Monitoring Board recommended continuation of the GOG-0212 trial of Opaxio for maintenance therapy in ovarian cancer with no changes following the first planned interim survival analysis. Three prior pivotal clinical trials for Opaxio have not been successful and failure of the GOG-0212 trial could delay, limit or preclude regulatory approval of Opaxio.PIXUVRI.

We may be subject to fines, penalties, injunctions and other sanctions if we are deemed to be promoting the use of our products for non-FDA-approved, or off-label, uses.

Our business and future growth depend on the development, use and ultimate sale of products that are subject to FDA, EMA and or other regulatory agencies regulation, clearance and approval. Under the U.S. Federal Food, Drug, and Cosmetic Act and other laws, we are prohibited from promoting our products for off-label uses. This means that in the United States,U.S., we may not make claims about the safety or effectiveness of our products and may not proactively discuss or provide information on the use of our products, except as allowed by the FDA.

Government investigations concerning the promotion of off-label uses and related issues are typically expensive, disruptive and burdensome, and generate negative publicity. If our promotional activities are found to bepublicity and may result in violationfines or payments of applicable law or if we agree to a settlement in connection with an enforcement action, we would likely face significant fines and penalties and would likely be required to substantially change our sales, promotion, grant and educational activities.awards. For example, in April 2007, we paid a civil penalty of $10.6 million and entered into a settlement agreement with the U.S. Attorney’s OfficeUSAO for the Western District of Washington arising out of their investigation into certain of our prior marketing practices relating to TRISENOX, which was divested to Cephalon Inc. in July 2005. As part of that settlement agreement and in connection with the acquisition of Zevalin, we also entered into a corporate integrity agreement with the Office of Inspector General of the U.S. Department of Health and Human Services,OIG-HHS, which required us to establish a compliance committee and compliance program and adopt a formal code of conduct. If our promotional activities are found to be in violation of applicable law or if we agree to a settlement in connection with an enforcement action, we would likely face significant fines and penalties and would likely be required to substantially change our sales, promotion, grant and educational activities.

A failure to comply with laws and regulations that govern our cross-border conduct, as well as with healthcare fraud and abuse and false claims laws and regulations, could result in substantial penalties and prosecution.

We are subject to risks associated with doing business outside of the U.S., which exposes us to complex foreign and U.S. regulations. For example, we are subject to regulations imposed by the Foreign Corrupt

Practices Act, or FCPA, and other anti-corruption laws that generally prohibit U.S. companies and their intermediaries from offering, promising, authorizing or making improper payments to foreign government officials for the purpose of obtaining or retaining business. The SEC and U.S. Department of Justice have increased their enforcement activities with respect to the FCPA. Internal control policies and procedures and employee training and compliance programs that we have implemented to deter prohibited practices may not be effective in prohibiting our employees, contractors or agents from violating or circumventing our policies and the law.

In addition, we are subject to various state and federal fraud and abuse laws, including, without limitation, the federal Anti-Kickback Statute and federal False Claims Act. There are similar laws in other countries. These laws may impact, among other things, the sales, marketing and education programs for our drugs. The federal Anti-Kickback Statute prohibits persons from knowingly and willingly soliciting, offering, receiving or providing remuneration, directly or indirectly, in exchange for or to induce either the referral of an individual, or the furnishing or arranging for a good or service, for which payment may be made under a federal healthcare program. The federal False Claims Act prohibits persons from knowingly filing, or causing to be filed, a false claim to, or the knowing use of false statements to obtain payment from the federal government. Suits filed under the False Claims Act can be brought by any individual on behalf of the government and such individuals, commonly known as “whistleblowers,” may share in any amounts paid by the entity to the government in fines or settlement. Many states have also adopted laws similar to the federal Anti-Kickback Statute and False Claims Act.

We are unable to predict whether we could be subject to actions under any of the foregoing or similar laws and regulations, or the impact of such actions. If we failwere to establish and maintain collaborations,be found to be in violation of these laws or regulations, we may be unablesubject to developpenalties, including civil and commercializecriminal penalties, damages, fines, exclusion from government healthcare reimbursement programs and the curtailment or restructuring of our product candidates.

Weoperations, all of which could have entered into collaborative arrangements with third-parties to develop and/or commercialize product candidatesa material adverse effect on our business and are currently seeking additional collaborations. For example, we entered into an agreement with the GOG to perform a Phase 3 trialresults of Opaxio in patients with ovarian cancer. Additional collaborations might be necessary in order for us to fund our research and development activities and third-party manufacturing arrangements, seek and obtain regulatory approvals and successfully commercialize our existing and future product candidates. If we fail to enter into additional collaborative arrangements or fail to maintain our existing collaborative arrangements, the number of product candidates from which we could receive future revenues would decline.operations.

Our dependenceWe are dependent on collaborative arrangements with third parties will subject us to a number of risks that could harm our ability to develop and commercialize products.

Our collaborative arrangements with third parties, subject us to a number of risks, including:

collaborative arrangements may not be on terms favorable to us;

disagreements with partners may result in delays in the development and marketing of products, termination of our collaboration agreements or time consuming and expensive legal action;

we cannot control the amount and timing of resources partners devote to product candidates or their prioritization of product candidates and partners may not allocate sufficient funds or resources to the development, promotion or marketing of our products, or may not perform their obligations as expected;

partners may choose to develop, independently or with other companies, alternative products or treatments, including products or treatments which compete with ours;

agreements with partners may expire or be terminated without renewal, or partners may breach collaboration agreements with us;

business combinations or significant changes in a partner’s business strategy might adversely affect that partner’s willingness or ability to complete its obligations to us; and

the terms and conditions of the relevant agreements may no longer be suitable.

The occurrence of any of these events could harm the development or commercialization of our products.

Our dependence on third-party manufacturers means that we do not always have direct control overthird-parties for the manufacture, testing orand distribution of products and product candidates. Any failure or delay in manufacturing, or in obtaining a qualified vendor when needed, could delay the clinical development and commercialization of the applicable product(s) and product candidate(s) and harm our products.business.

We do not currently have internal analytical laboratory or manufacturing facilities to allow the testing or production and distribution of drug products in compliance with cGMPs. WecGMPs, and we instead utilize third party vendors. In particular, we are dependent on a single vendor for the manufacturing of each of PIXUVRI, pacritinib and tosedostat. With respect to Opaxio, we are presently relying on stored inventory of the drug, as such,we do not presently have a manufacturing agreement in place for Opaxio. Because we do not have direct control over the manufacture, testing or distribution of PIXUVRI. The active pharmaceutical ingredients and drug products for our products under development, pacritinib, tosedostat and brostallicin, are manufactured by single vendors. Finished product manufacture and distribution for these products are to be manufactured and distributed by different single vendors. In addition, one of our other products under development, Opaxio, has a complex manufacturing process and supply chain, which may prevent us from obtaining a sufficient supply of drug product for the clinical trials and commercial activities currently planned or underway on a timely basis, if at all. Becauseinfrastructure, we do not directly control our suppliers, these vendors may not be able to provide us with finished product when we need it. If our vendors fail to comply with regulatory requirements or we experience a delay in the manufacturing of our finished products, we may experience a delay in the distribution of our products, which may impact the related clinical trials and our commercial activities currently planned or underway.

If our contract manufacturers and/or our products fail to comply with FDA, EMA or other applicable regulations, we may have to curtail or stop the manufacture of such products which would harm our sales.

We are dependent upon third partiesour vendors to supply us in a timely manner with products manufactured in compliance with cGMPs or similar manufacturing standards imposed by United Statesthe U.S. and/or applicable foreign regulatory authorities, where our products will be tested and/or marketed. Whileincluding the FDA EMA and other regulatory authorities maintain oversight for cGMP complianceEMA. Any of drug manufacturers, contract manufacturers and contract service providers may at times violate cGMPs. The FDA, EMA and othersuch regulatory authorities may take action against a contract manufacturer who violates cGMPs. Failure to comply with FDA, EMA or other applicable regulations may cause us to curtail or stop the manufacture of such products until we obtain regulatory compliance. Both before and after approval, our contract manufacturers and our products are subject to numerous regulatory requirements covering, among other things, testing, manufacturing, quality control, labeling, advertising, promotion, distribution and export. Manufacturing processes must conform to current Good Manufacturing Practice, or cGMPs. The FDA, EMA and other regulatory authorities periodically inspect manufacturing facilities to assess compliance with cGMPs. Failure of our manufacturers to comply with FDA, EMA or other applicable regulations may cause us to curtail or stop the manufacture of such products until we obtain regulatory compliance.

With respect to commercial supply arrangements, we currently have such an arrangement in place for PIXUVRI, but we do not presently have one in place for pacritinib (or for our other product candidates). In particular, as we have continued to advance the development of pacritinib and position such product for potential commercialization, procuring a qualified commercial supplier for pacritinib has become an important objective.

Any failure or delay in the manufacturing and testing of a product or product candidate in compliance which wouldwith applicable regulations, or in obtaining and maintaining qualified vendors (including qualified commercial suppliers) to provide the requisite services when needed, could delay the clinical development and commercialization of the applicable product or product candidate and harm our business, financial condition and results of operations.business.

Our financial condition may be harmed if third parties default in the performance of contractual obligations.

Our business is dependent on the performance by third parties of their responsibilities under contractual relationships. For example, in 2005 we sold our product TRISENOX to Cephalon and, pursuant to the terms of the purchase agreement under which TRISENOX was sold, we are entitled to receive milestone payments upon

the approval by the FDA of new labeled uses for TRISENOX; however, Cephalon may decide not to submit any additional information to the FDA to apply for label expansion of TRISENOX, in which case we would not receive a milestone payment under the agreement. In September 2012, our wholly-owned subsidiary CTI Life Sciences Ltd.,Limited, or CTILS, entered into a Logistics Agreement with Movianto Nederland BV, or Movianto, pursuant to which Movianto agreed to provide certain warehousing, transportation, distribution, order processing and cash collection services and all related activities to CTILS and its affiliates for PIXUVRI in certain agreed territories in Europe. Movianto provides a variety of services related to our sales of PIXUVRI, including the receipt, unloading and checking, warehousing and inventory control; customer order management; distribution and transportation; lot number and expiry date control; returned goods processing; return and recall; product quality assurance; and reporting, credit management and debt collection. If Movianto, or other third parties we may enter into contracts with default on the performance of their contractual obligations, we could suffer significant financial losses and operational problems, which could in turn adversely affect our financial performance, cash flows or operating results of operations and may jeopardize our ability to maintain our operations.

We face direct and intense competition from our competitors in the biotechnology and pharmaceutical industries, and we may not compete successfully against them.

Competition in the oncology market is intense and is accentuated by the rapid pace of technological and product development. We anticipate that we will face increased competition in the future as new companies enter the market. Our competitors in the United StatesU.S. and elsewhere are numerous and include, among others, major multinational pharmaceutical companies, specialized biotechnology companies and universities and other research institutions. Specifically:

 

In Europe, PIXUVRI faces competition from existing treatments for adults with multiply relapsed or refractory aggressive B-cell NHL. For example, patients are currently being treated with bendamustine, oxaliplatin and gemcitabine, although these particular agents do not have regulatory approval in Europe for the foregoing indication. If we were to pursue bringing PIXUVRI to market in the U.S. (which is not currently part of our near-term plan), PIXUVRI would face similar competition. In addition, PIXUVRI may face competition in the E.U. (and, if applicable in the future, the U.S.) if new anti-cancer drugs with reduced toxicity and/or increased efficacy are developed and marketed in the E.U. and/or the U.S.

  

If we are successful in bringing PIXUVRIpacritinib to market, in the United States, PIXUVRIpacritinib will face competition from currently marketed anthracyclines, such as mitoxantrone (Novantroneruxolitinib (Jakafi®). In addition, PIXUVRI and new drugs targeting similar diseases that may face competition in the United States and the European Union if new anti-cancer drugs with reduced toxicity arebe developed and marketed in the United States and/or the European Union.marketed.

 

  

If we are successful in bringing Opaxio to market, we will face direct competition from oncology-focused multinational corporations. Opaxio will compete with other taxanes. Many oncology-focused multinational corporations currently market or are developing taxanes, epothilones, and other cytotoxic agents, which inhibit cancer cells by a mechanism similar to taxanes, or similar products. Such corporations include, among others, Bristol-Myers Squibb Co. and others,, which market paclitaxel and generic forms of paclitaxel; Sanofi-Aventis U.S. LLC, which markets docetaxel; Genentech, Inc., Hoffmann-La Roche Inc. and OSI Pharmaceuticals,Astellas Pharma US, Inc., which market Tarceva™; Genentech, Inc. and Hoffmann-La Roche Inc., which market Avastin™; Eli Lilly & Company, which markets Alimta®; and Celgene Corporation, which markets Abraxane™. In addition, other companies such as Telik, Inc. are also developing products, which could compete with Opaxio.

 

  

If we are successful in bringing pacritinib to market, pacritinib will face competition from ruxolitinib (Jakafi®) and new drugs targeting similar diseases that may be developed and marketed.

If we are successful in bringing tosedostat to market, tosedostat will face competition from currently marketed products, such as cytarabine, Dacogen®, Vidaza®, Clolar®, Revlimid®, Thalomid® and new anti-cancer drugs that may be developed and marketed.

If we are successful in bringing brostallicin to market, we will face direct competition from other minor groove binding agents including Yondelis®, which is currently developed by PharmaMar and has received Authorization of Commercialization from the European Commission for soft tissue sarcoma.

Many of our competitors, particularly the multinational pharmaceutical companies, either alone or together with their collaborators, have substantially greater financial and technical resources and substantially larger development and marketing teams than us, as well as significantly greater experience than we do in developing, manufacturing and marketing products. As a result, products of our competitors might come to market sooner or

might prove to be more effective, less expensive, have fewer side effects or be easier to administer than ours. In

any such case, sales of our current or future products would likely suffer and we might never recoup the significant investments we are making to develop these product candidates.

If users of our products are unableThe pharmaceutical business is subject to obtain adequate reimbursement from third party payers, or if new restrictive legislation is adopted, market acceptance of our products may be limited and we may not achieve anticipated revenues.

Even if we succeed in bringing any of our proposed products to market, they may not be considered cost-effective and third-party orincreasing government reimbursement might not be available or sufficient. The continuing efforts of government and insurance companies, health maintenance organizationsprice controls and other payers of healthcare costsrestrictions on pricing, reimbursement, and access to contain or reduce costs of health care maydrugs, which could affect our future revenues and profitability if new restrictive legislation is adopted.

Legislation and regulations affecting the future revenues and profitabilitypricing of pharmaceuticals may change in ways adverse to us before or after any of our potential customers, suppliersproposed products are approved for marketing. In the U.S., we are subject to substantial pricing, reimbursement and collaborative partnersaccess pressures from state Medicaid programs, private insurance programs and pharmacy benefit managers, and implementation of U.S. health care reform legislation is increasing these pricing pressures. The Patient Protection and Affordable Care Act (HR 3590) instituted comprehensive health care reform in 2010 and includes provisions that, among other things, reduce and/or limit Medicare reimbursement, require all individuals to have health insurance (with limited exceptions) and impose new and/or increased taxes. These measures could significantly influence the availabilitypurchase of capital. Governmentalhealthcare services and other third-party payors continueproducts, resulting in lower prices and reducing demand for our products. In addition, many state legislative proposals could further negatively affect our pricing and reimbursement for, or access to, attempt to contain healthcare costs by:our products.

Globally, governments are becoming increasingly aggressive in imposing health care cost-containment measures such as:

 

challenging the prices charged for health care products and services;adopting more restrictive price controls;

 

limiting and reducing both coverage and the amount of reimbursement for new therapeutic products;

 

denying or limiting coverage for products that are approved by the FDA or the EMA, but are considered experimental or investigational by third-party payors;

 

restricting access to human pharmaceuticals based on the payers’ assessments of comparative effectiveness and value;

refusing in some cases to provide coverage when an approved product is used for disease indications in a way that has not received FDA or EMA marketing approval; and

 

denying coverage altogether.

Federal statutes generally prohibit providing certain discounts and payments to physicians to encourage them to prescribe our product. Violations of such regulations or statutes may result in treble damages, criminal or civil penalties, fines or exclusion of us or our employees from participation in federal and state health care programs. Although we have policies prohibiting violations of relevant regulations and statutes, unauthorized actions of our employees or consultants, or unfavorable interpretations of such regulations or statutes may result in third parties or regulatory agencies bringing legal proceedings or enforcement actions against us. Because we will likely need to develop a new sales force for any future marketed products, we may have a greater risk of such violations from lack of adequate training or experience. The expense to retain and pay legal counsel and consultants to defend against any such proceedings would be substantial, and together with the diversion of management’s time and attention to assist in any such defense, may negatively affect our business, financial condition and results of operations.

In the United States, under the Patient Protection and Affordable Care Act (HR 3590), or the PPACA, instituted comprehensive health care reform in 2010 and we believe the U.S. Congress and state legislatures will likely continue to focus on health care reform, the cost of healthcare services and products and on the reform of the Medicare and Medicaid systems. The announcement or adoption of these proposals could significantly influence the purchase of healthcare services and products, resulting in lower prices and reducing demand for our products. In addition, in almost all European markets, pricing and choice of prescription pharmaceuticals are subject to governmental control. Therefore, the price of our products and their reimbursement in Europe will be determined by national regulatory authorities. For example, the pricing of PIXUVRI in Europe is subject to governmental control and we are focused on obtaining reimbursement in the five major market European countries (France, Germany, Italy, Spain and the United Kingdom), as well as smaller territories in Western and Northern Europe, in 2013.

If adequate third-party or government coverage is not available, or if new restrictive legislation is adopted, market acceptance of our products may be limited and we may not be able to maintain price levels sufficient to realize an appropriate return on our investment in research and product development or achieve anticipated revenues. In addition, legislation and regulations affecting the pricing of pharmaceuticals may change in ways adverse to us before or after any of our proposed products are approved for marketing.

If any of our license agreements for intellectual property underlying PIXUVRI, pacritinib, Opaxio, tosedostat, brostallicin, or any other productsour compounds are terminated, we may lose the right to develop or market that product.

We have acquired or licensed intellectual property from third parties, including patent applications and patents relating to intellectual property for PIXUVRI, pacritinib tosedostat, and brostallicin.tosedostat. We have also licensed the intellectual property for our drug delivery technology relating to Opaxio, which uses polymers that are linked to drugs known as polymer-drug conjugates. Some of our product development programs depend on our ability to maintain rights under these licenses. Each licensor has the power to terminate its agreement with us if we fail to meet our obligations under these licenses. We may not be able to meet our obligations under these licenses. If we default under any license agreement, we may lose our right to market and sell any products based on the licensed technology and may be forced to cease operations, liquidate our assets and possibly seek bankruptcy protection. Bankruptcy may result in the termination of agreements pursuant to which we license certain intellectual property rights, including the rights to PIXUVRI, pacritinib, Opaxio, tosedostat, and brostallicin.rights.

If we are unable to enter into new in-licensing arrangements, our future product portfolio and potential profitability could be harmed.

One component of our business strategy is in-licensing drug compounds developed by other pharmaceutical and biotechnology companies or academic research laboratories. Our product candidates PIXUVRI, Opaxio, tosedostat and brostallicinOpaxio, which are in clinical and pre-clinical development, and arePIXUVRI, which is in a post-approval commitment study, have been in-licensed or acquired from third-parties.

Competition for new promising compounds and commercial products can be intense. If we are not able to identify future in-licensing opportunities and enter into future licensing arrangements on acceptable terms, our future product portfolio and potential profitability could be harmed.

We hold rights under numerous patents that we have acquired or licensed or that protect inventions originating from our research and development, and the expiration of any one or more of these patents may allow our competitors to copy the inventions that are currently protected.

We dedicate significant resources to protecting our intellectual property, which is important to our business. We have filed numerous patent applications in the United StatesU.S. and various other countries seeking protection of inventions originating from our research and development, and we have also obtained rights to various patents and patent applications under licenses with third parties and through acquisitions. Patents have been issued on many of these applications. We have pending patent applications or issued patents in the United StatesU.S. and foreign countries directed to PIXUVRI, pacritinib, Opaxio, tosedostat, brostallicinOpaxio and other product candidates. However, the lives of these patents are limited. Patents for the individual products extend for varying periods according to the date of the patent filing or grant and the legal term of patents in the various countries where patent protection is obtained. The Opaxio-directed patents will expire on various dates ranging from 2017 through 2018. The pacritinib-directed U.S. patents will expire from 2026 through 2029. The PIXUVRI-directed U.S. patents will expire in 2014. The tosedostat-directed U.S. patents will expire in 2017. The brostallicin-directed U.S. patents will expire on various dates ranging between 2017 through 2021. The PIXUVRI-directed patents currently in force in Europe will expire from 20132015 through 2023. Such patent expirations do not account for potential extensionsSome of these European patents are subject to Supplementary Protection Certificates such that may be available in certain countries. For example,the extended patents will expire from 2020 to 2027. Although certain PIXUVRI-directed patents may be subject to possible patent-term extensions that could provide extensions through 2019 in the United StatesU.S. and through 2027 in some additional countries in Europe. Supplementary Protection Certificates extending certain PIXUVRI-directed patents have been granted in Italy and Luxembourg, butEurope, there can be no guarantee of extensions of PIXUVRI-directed or other patents in other countries. The expiration of these patents may allow our competitors to copy the inventions that are currently protected and better compete with us.

If we fail to adequately protect our intellectual property, our competitive position could be harmed.

Development and protection of our intellectual property are critical to our business. If we do not adequately protect our intellectual property, competitors may be able to practice our technologies. Our success depends in part on our ability to:

 

obtain and maintain patent protection for our products or processes both in the United StatesU.S. and other countries;

 

protect trade secrets; and

 

prevent others from infringing on our proprietary rights.

The patent position of biopharmaceutical firms generally is highly uncertain and involves complex legal and factual questions. The U.S. Patent and Trademark Office has not established a consistent policy regarding the breadth of claims that it will allow in biotechnology patents. If it allows broad claims, the number and cost of patent interference proceedings in the United StatesU.S. and the risk of infringement litigation may increase. If it allows narrow claims, the risk of infringement may decrease, but the value of our rights under our patents, licenses and patent applications may also decrease. Patent applications in which we have rights may never issue as patents, and the claims of any issued patents may not afford meaningful protection for our technologies or products. In

addition, patents issued to us or our licensors may be challenged and subsequently narrowed, invalidated or circumvented. Litigation, interference proceedings or other governmental proceedings that we may become involved in with respect to our proprietary technologies or the proprietary technology of others could result in substantial cost to us.

We also rely upon trade secrets, proprietary know-how and continuing technological innovation to remain competitive. Third parties may independently develop such know-how or otherwise obtain access to our technology. While we require our employees, consultants and corporate partners with access to proprietary information to enter into confidentiality agreements, these agreements may not be honored.

Patent litigation is widespread in the biotechnology industry, and any patent litigation could harm our business.

Costly litigation might be necessary to protect a patent position or to determine the scope and validity of third-party proprietary rights, and we may not have the required resources to pursue any such litigation or to protect our patent rights. Any adverse outcome in litigation with respect to the infringement or validity of any patents owned by third parties could subject us to significant liabilities to third parties, require disputed rights to be licensed from third parties or require us to cease using a product or technology. With respect to our in-licensed patents, if we attempt to initiate a patent infringement suit against an alleged infringer, it is possible that our applicable licensor will not participate in or assist us with the suit and as a result we may not be able to effectively enforce the applicable patents against the alleged infringers.

We may be unable to obtain or protect our intellectual property rights and we may be liable for infringing upon the intellectual property rights of others, which may cause us to engage in costly litigation and, if unsuccessful, could cause us to pay substantial damages and prohibit us from selling our products.

At times, we may monitor patent filings for patents that might be relevant to some of our products and product candidates in an effort to guide the design and development of our products to avoid infringement, but may not have not conducted an exhaustive search. We may not be able to successfully challenge the validity of third-party patents and could be required to pay substantial damages, possibly including treble damages, for past infringement and attorneys’ fees if it is ultimately determined that our products infringe such patents. Further, we may be prohibited from selling our products before we obtain a license, which, if available at all, may require us to pay substantial royalties.

Moreover, third parties may challenge the patents that have been issued or licensed to us. We do not believe that PIXUVRI, pacritinib or any of the productsother compounds we are currently developing infringe upon the rights of any third parties nor

are they infringed upon by third parties; however, there can be no assurance that our technology will not be found in the future to infringe upon the rights of others or be infringed upon by others. In such a case, others may assert infringement claims against us, and should we be found to infringe upon their patents, or otherwise impermissibly utilize their intellectual property, we might be forced to pay damages, potentially including treble damages, if we are found to have willfully infringed on such parties’ patent rights. In addition to any damages we might have to pay, we may be required to obtain licenses from the holders of this intellectual property, enter into royalty agreements or redesign our drug candidates so as not to utilize this intellectual property, each of which may prove to be uneconomical or otherwise impossible. Conversely, we may not always be able to successfully pursue our claims against others that infringe upon our technology and the technology exclusively licensed from any third parties. Thus, the proprietary nature of our technology or technology licensed by us may not provide adequate protection against competitors.

Even if infringement claims against us are without merit, or if we challenge the validity of issued patents, lawsuits take significant time, may, even if resolved in our favor, be expensive and divert management attention from other business concerns. concerns.Uncertainties resulting from the initiation and continuation of any litigation could limit our ability to continue our operations.

We are currently and may in the future be subject to litigation proceedings that could harm our financial condition and results of operations.operating results.

We may be subject to legal claims or regulatory matters involving shareholder, consumer, regulatory and other issues. As described in “Legal Proceedings” in Part I, Item 3, of this Form 10-K,“Legal Proceedings,” we are currently engaged in a number of litigation matters. Litigation is subject to inherent uncertainties, and unfavorable rulings could occur. Adverse outcomes in some or all of such pending cases may result in significant monetary damages or injunctive relief against us. If an unfavorable ruling were to occur in any of the legal proceedings we are or may be subject to, our business, financial condition, operating results of operations and the trading price of our securities mayprospects could be harmed for the period in which the ruling occurred or future periods.harmed.

We are subject to a variety of claims and lawsuits from time to time, some of which arise in the ordinary course of our business. The ultimate outcome of litigation and other claims is subject to inherent uncertainties, and our view of these matters may change in the future.

It is possible that our financial condition and operating results of operations could be harmed in any period in which the effect of an unfavorable final outcome becomes probable and reasonably estimable. For example, as described in “Legal Proceedings” in Part I, Item 3, of this Form 10-K,“Legal Proceedings,” CONSOB has not yet notified us of a resolution with respect to its claim that our disclosure related to the contents of the opinion expressed by Stonefield Josephson, Inc., an independent public accounting firm, with respect to our 2008 financial statements was late. However, based on our assessment, we believe the likelihood that it is probable that CONSOB will impose a pecuniary administrative sanction for such asserted violation.

In the past, following periods of volatility in the market price of a company’s securities, securities class action litigation has often been instituted. For example, we and certain of our officers and directors were named as defendants in purported securitiesSecurities class action and shareholder derivative lawsuits broughtare often instituted against issuers, and we have been subjected to such actions. For example, on behalfMay 31, 2013, we settled a shareholder derivative lawsuit pursuant to which we agreed to implement certain corporate governance measures and were required to pay $1.4 million in plaintiffs’ attorneys’ fees and reimbursement of a putative classexpenses, all of purchasers ofwhich amount was covered by our securities from March 25, 2008 through March 22, 2010 that we subsequently settled. insurance.

We could notcannot predict with certainty the eventual outcome of pending litigation. Furthermore, we may have to incur substantial expenses in connection with thesesuch lawsuits and our management’s attention and resources could be diverted from operating our business as we respond to the litigation. Our insurance is subject to high deductibles and there is no guarantee that the insurance will cover any specific claim that we currently face or may face in the future, or that it will be adequate to cover all potential liabilities and damages.

Prior to when commercial sales of PIXUVRI began, we had an exclusive manufacturing contract for drug substance with a different manufacturer. We are currently disputing our right to cancel the exclusive manufacturing contract between us and the former manufacturer of PIXUVRI. We assert multiple grounds for

terminating this exclusive manufacturing agreement, which the former manufacturer disputes. The former manufacturer has asserted that we do not have the right to terminate the manufacturing contracts and has filed a lawsuit in the Court of Milan to compel us to source PIXUVRI from that manufacturer. A hearing was held on January 21, 2010 to discuss preliminary matters and set a schedule for future filings and hearings. On November 11, 2010, a hearing was held aimed at examining and discussing the requests for evidence submitted by the parties in the briefs filed pursuant to article 183, paragraph 6 of the Italian code of civil procedure. At the hearing on November 1,1 2010, the judge declared that the case does not require any discovery or evidentiary phase, as it may be decided on the basis of the documents and pleadings filed by the parties. At the hearing on October 11, 2012, the parties informed the court about the ongoing negotiations pending between them and asked the court, accordingly, to postpone the case. At the request of the parties, the court extended the final hearing until March 21, 2013.

If there is an adverse outcome in the shareholder derivative litigation that was filed against us, our business may be harmed.

In April 2010, three shareholder derivative complaints were filed against us and certain of our officers and directors in the U.S. District Court for the Western District of Washington. These derivative complaints allege that defendants breached their fiduciary duties to us by making or failing to prevent the issuance of certain alleged false and misleading statements related to the FDA approval process for PIXUVRI. In May 2010, Judge Marsha Pechman consolidated the shareholder derivative actions under the caption Shackleton v. Bauer (Case No. 2:10-cv-00414-MJP), and appointed the law firms of Robbins Umeda LLP (now Robbins Arroyo LLP) and Federman & Sherwood as co-lead counsel for derivative plaintiffs. Three more derivative complaints were filed in June, July and October 2010, and they have also been consolidated with Shackleton v. Bauer. In November 2012, co-lead counsel filed an executed Stipulation of Settlement, with attached exhibits, with the Court and derivative plaintiffs filed an Unopposed Motion for Preliminary Approval of Settlement, along with related documents. The Court issued an Order Preliminarily Approving Settlement and Providing for Notice on December 26, 2012, scheduling a settlement hearing for March 22, 2013 at 10:00 am. In February 2013, co-lead counsel filed Plaintiffs’ Unopposed Motion for Final Approval of the Settlement and Plaintiffs’ Application for Attorneys’ Fees, Reimbursement of Expenses, and Incentive Award, seeking up to $1.3 million in attorneys fees, reimbursement of $58,195.07 in expenses, and an incentive award of $1,500.00 for plaintiff Joseph Shackleton. We believe these fees and expenses will be covered by insurance. At this stage of the litigation, no probability of loss can be predicted in the event the settlement does not receive final approval.

As with any litigation proceeding, we cannot predict with certainty the eventual outcome of pending litigation. Furthermore, we may have to incur substantial expenses in connection with these lawsuits. In the event of an adverse outcome under any currently pending or future lawsuit, our business could be materially harmed.

We may be unable to obtain the raw materials necessary to produce our Opaxio product candidate in sufficient quantity to meet demand when and if such product is approved.

We may not be able to continue to purchase the materials necessary to produce Opaxio, including paclitaxel, in adequate volume and quality. Paclitaxel is derived from certain varieties of yew trees and the supply of paclitaxel is controlled by a limited number of companies. We purchase the raw materials paclitaxel and polyglutamic acid from single sources. If the paclitaxel or polyglutamic acid purchased from our sources is insufficient in quantity or quality, if a supplier fail to deliver in a timely fashion or at all, or if these relationships terminate, we may not be able to qualify and obtain a sufficient supply from alternate sources on acceptable terms, or at all.

Our net operating losses may not be available to reduce future income tax liability.

OurWe have substantial tax loss carryforwards for U.S. federal income tax purposes, but our ability to use such carryforwards to offset future income or tax liability is limited under section 382 of the Internal Revenue Code of 1986, as amended, as a result of prior changes in the stock ownership of the company. Moreover, future changes

in the ownership of our stock, including those resulting from issuance of shares of our common stock upon exercise of outstanding warrants, may further limit our ability to use our net operating losses.

Our operations in our European branches and subsidiaries make us subject to increased risk regarding currency exchange rate fluctuations.

We are exposed to risks associated with the translation of euro-denominated financial results and accounts into U.S. dollars for financial reporting purposes. The carrying value of the assets and liabilities, as well as the reported amounts of revenues and expenses, in our European branches and subsidiaries will be affected by fluctuations in the value of the U.S. dollar as compared to the euro. Changes in the value of the U.S. dollar as compared to the euro might have an adverse effect on our reported operating results and financial condition.

We may be unable to obtain the raw materials necessary to produce a particular product or product candidate.

We may not be able to purchase the materials necessary to produce a particular product or product candidate in adequate volume and quality. For example, paclitaxel, a material used to produce Opaxio, is derived from certain varieties of yew trees and the supply of paclitaxel is controlled by a limited number of companies. We purchase paclitaxel and polyglutamic acid (another material used to produce Opaxio) from single sources. If paclitaxel or polyglutamic acid, or any other raw material required to produce a product or product candidate, is insufficient in quantity or quality, if a supplier fails to deliver in a timely fashion or at all or if these relationships terminate, we may not be able to qualify and obtain a sufficient supply from alternate sources on acceptable terms, or at all.

Because there is a risk of product liability associated with our products, we face potential difficulties in obtaining insurance.insurance, and if product liability lawsuits were to be successfully brought against us, our business may be harmed.

Our business exposes us to potential product liability risks inherent in the testing, manufacturing and marketing of human pharmaceutical products. In particular, as a result of the commercialization of PIXUVRI, our risk with respect to potential product liability has increased. If theour insurance covering thea product use in our clinical trials for ouror product candidatescandidate is not maintained on acceptable terms or at all, we might not have adequate coverage against potential liabilities. Our inability to obtain sufficient insurance coverage at an acceptable cost or otherwise to protect against potential product liability claims could prevent or limit the commercialization of any products we develop. A successful product liability claim could also exceed our insurance coverage and could harm our financial condition and results of operations.

Our assets and liabilities in our European branches and subsidiaries make us subject to increased risk regarding currency exchange rate fluctuations.

We are exposed to risks associated with the translation of euro-denominated financial results and accounts into U.S. dollars for financial reporting purposes. The carrying value of the assets and liabilities held in our European branches and subsidiaries will be affected by fluctuations in the value of the U.S. dollar as compared to the euro. Changes in the value of the U.S. dollar as compared to the euro might have an adverse effect on our reported results of operations and financial condition.operating results.

Since we use hazardous materials in our business, we may be subject to claims relating to improper handling, storage or disposal of these materials.

Our research and development activities involve the controlled use of hazardous materials, chemicals and various radioactive compounds. We are subject to international, federal, state and local laws and regulations governing the use, manufacture, storage, handling and disposal of such materials and certain waste products. Although we believe that our safety procedures for handling and disposing of such materials comply with the standards prescribed by the regulations, the risk of accidental contamination or injury from these materials cannot be eliminated completely. In the event of such an accident, we could be held liable for any damages that result and any such liability not covered by insurance could exceed our resources. Compliance with environmental laws and regulations may be expensive, and current or future environmental regulations may impair our research, development or production efforts.

We may not be abledepend on sophisticated information technology systems to conduct animal testingoperate our business and a cyber-attack or other breach of these systems could have a material adverse effect on our business.

We rely on information technology systems to process, transmit and store electronic information in our day-to-day operations. The size and complexity of our information technology systems makes them vulnerable to a cyber-attack, malicious intrusion, breakdown, destruction, loss of data privacy or other significant disruption. Any such successful attacks could result in the theft of intellectual property or other misappropriation of assets, or otherwise compromise our confidential or proprietary information and disrupt our operations. Cyber-attacks are becoming more sophisticated and frequent. We have invested in our systems and the protection of our data to reduce the risk of an intrusion or interruption, and we monitor our systems on an ongoing basis for any current or potential threats. There can be no assurance that these measures and efforts will prevent future interruptions or breakdowns. If we fail to maintain or protect our information technology systems and data integrity effectively or fail to anticipate, plan for or manage significant disruptions to these systems, we could have difficulty preventing, detecting and controlling fraud, have disputes with customers, physicians and other health care professionals, have regulatory sanctions or penalties imposed, have increases in operating expenses, incur

expenses or lose revenues as a result of a data privacy breach or theft of intellectual property or suffer other adverse consequences, any of which could harm our research and development activities.

Certain of our research and development activities involve animal testing. Such activities have been the subject of controversy anda material adverse publicity. Animal rights groups and other organizations and individuals have attempted to stop animal testing activities by pressing for legislation and regulation in these areas and by disrupting activities through protests and other means. To the extent the activities of these groups are successful,effect on our business, could be materially harmed by delaying or interrupting our researchresults of operations, financial condition and development activities.cash flows.

Risks Related To the Securities Markets

The market price of shares of our common stock is extremely volatile, which may affect our ability to raise capital in the future and may subject the value of your investment in our securities to sudden decreases.

The market price for securities of biopharmaceutical and biotechnology companies, including ours, historically has been highly volatile, and the market from time to time has experienced significant price and volume fluctuations that are unrelated to the operating performance of such companies. The market price of our

common stock may be harmed by market conditions affecting the stock markets in general, including price and trading fluctuations on The NASDAQ Capital Market. For example, during the twelve month12-month period ended February 22, 2013,24, 2014, our stock price has ranged from a low of $1.14$0.97 to a high of $7.40 (as adjusted to reflect the one-for-five reverse stock split effective September 2, 2012).$4.25. Fluctuations in the trading price or liquidity of our common stock may harm the value of your investment in our common stock. These conditions may result in (i) volatility in the level of, and fluctuations in, the market prices of stocks generally and, in turn, our shares of common stock, and (ii) sales of substantial amounts of our common stock in the market, in each case that could be unrelated or disproportionate to changes in our operating performance.

Factors that may have a significant impact on the market price and marketability of our securities include:

 

announcements by us or others of results of preclinical testing and clinical trials and regulatory actions;

 

announcements by us or others of serious adverse events that have occurred during treatmentadministration of patients following the grant of conditional marketing authorization for PIXUVRI in the European Union;our products to patients;

 

announcements of technological innovations or new commercial therapeutic products by us, our collaborative partners or our present or potential competitors;

 

our issuance of debt, equity or other securities, which we need to pursue to generate additional funds to cover our operating expenses;

 

our quarterly operating results;

 

developments or disputes concerning patent or other proprietary rights;

 

developments in our relationships with collaborative partners;

 

acquisitions or divestitures;

 

our ability to realize the anticipated benefits of pacritinib;

 

litigation and government proceedings;

 

adverse legislation, including changes in governmental regulation;

 

third-party reimbursement policies;

 

changes in securities analysts’ recommendations;

 

short selling;

 

changes in health care policies and practices;

 

a failure to achieve previously announced goals and objectives as or when projected;

halting or suspension of trading in our common stock on The NASDAQ Capital Market by NASDAQ or on the MTA by CONSOB, or the Borsa Italiana; and

 

general economic and market conditions.

Securities class action lawsuits are often brought against companies after periods of volatility in the market price of their securities. Such lawsuits have been filed against us in the past, and should any new lawsuits be filed, such matters could result in substantial costs and a diversion of resources and our senior management team’s attention.

Shares of common stock are equity securities and are subordinate to any preferred stock we may issue and to any existing or future indebtedness.

Shares of our common stock rank junior to any shares of our preferred stock that we may issue in the future and to anyour existing indebtedness, including our senior secured term loan agreement, or future indebtedness we

may incur and to all creditor claims and other non-equity claims against us and our assets available to satisfy claims on us, including claims in a bankruptcy or similar proceeding. AnyOur senior secured term loan agreement restricts, and any future indebtedness and preferred stock may restrict, payment of dividends on our common stock.

Additionally, unlike indebtedness, where principal and interest customarily are payable on specified due dates, in the case of our common stock, (i) dividends are payable only when and if declared by our boardBoard of directorsDirectors or a duly authorized committee of our boardBoard of directors,Directors, and (ii) as a corporation, we are restricted to making dividend payments and redemption payments out of legally available assets. We have never paid a dividend on our common stock and have no current intention to pay dividends in the future. Furthermore, our common stock places no restrictions on our business or operations or on our ability to incur indebtedness or engage in any transactions, subject only to the voting rights available to shareholders generally.

Future sales or other dilution of our equity may harm the market price of shares of our common stock.

We expect to issue additional equity securities to fund our operating expenses as well as for other purposes. The market price of our shares of common stock or preferred stock could decline as a result of sales of a large number of shares of our common stock or preferred stock or similar securities in the market, or the perception that such sales could occur in the future.

Anti-takeover provisions in our charter documents, in our shareholder rights plan, or rights plan, and under Washington law could make removal of incumbent management or an acquisition of us, which may be beneficial to our shareholders, more difficult.

Provisions of our amended and restated articles of incorporation and amended and restated bylaws may have the effect of deterring or delaying attempts by our shareholders to remove or replace management, to commence proxy contests or to effect changes in control. These provisions include:

 

a classified board of directors so that only approximately one-third of our boardBoard of directorsDirectors is elected each year;

 

elimination of cumulative voting in the election of directors;

 

procedures for advance notification of shareholder nominations and proposals;

 

the ability of our boardBoard of directorsDirectors to amend our amended and restated bylaws without shareholder approval; and

 

the ability of our boardBoard of directorsDirectors to issue shares of preferred stock without shareholder approval upon the terms and conditions and with the rights, privileges and preferences as the boardBoard of directorsDirectors may determine.

Pursuant to our rights plan, an acquisition of 20%20 percent or more of our common stock by a person or group, subject to certain exceptions, could result in the exercisability of the preferred stock purchase right accompanying each share of our common stock (except those held by a 20%20 percent shareholder, which become null and void), thereby entitling the holder to receive upon exercise, in lieu of a number of units of preferred stock, that number of shares of our common stock having a market value of two times the exercise price of the right. The existence of our rights plan could have the effect of delaying, deferringdeterring or preventing a third party from making an acquisition proposal for us and may inhibit a change in control that some, or a majority, of our shareholders might believe to be in their best interest or that could give our shareholders the opportunity to realize a premium over the then-prevailing market prices for their shares. In addition, as a Washington corporation, we are subject to Washington’s anti-takeover statute, which imposes restrictions on some transactions between a corporation and certain significant shareholders. These provisions, alone or together, could have the effect of deterring or delaying changes in incumbent management, proxy contests or changes in control.

Item 1b.Unresolved Staff Comments

None.

Item 2.Properties

We currently lease approximately 66,000 square feet of space at 3101 Western Avenue in Seattle, Washington. The term of this lease is for a period of 120 months, which commenced on May 1, 2012.2012 and has a term of 120 months. We also lease approximately 4,700 square feet of warehouse space in Seattle, Washington with a lease expiration of May 2013.2014. Additionally, we lease 2,700 square feet in Milan, Italy with a lease expiration of December 2015 and 660 square feet in Heathrow, United KingdomU.K. with a lease expiration of September 2013.2014. We believe our existing and planned facilities are adequate to meet our present requirements. We anticipate that additional space will be available, when needed, on commercially reasonable terms.

 

Item 3.Legal Proceedings

On December 10, 2009, CONSOB sent us a notice claiming, two violationsamong other things, violation of the provisions of Section 114, paragraph 1 of the Italian Legislative Decree no. 58/98 due to the asserted late disclosure of certain information then reported, at CONSOB’s request, in press releases disseminated on December 19, 2008 and March 23, 2009. Such information concerned, respectively: (i) the conversion by BAM Opportunity Fund LP of 9.66% notes into shares of common stock that occurred between October 24, 2008 and November 19, 2008; and (ii) the contents of the opinion expressed by Stonefield Josephson, Inc., an independent registered public accounting firm, with respect to our 2008 financial statements. The sanctionssanction established by Section 193, paragraph 1 of the Italian Legislative Decree no. 58/98 for such violations areviolation could require us to pay a pecuniary administrative sanctionssanction amounting to between €5,000$7,000 and €500,000, or approximately $7,000 to $659,000 converted using the currency exchange rate$689,000 upon conversion from euros as of December 31, 2012, applicable to each of the two asserted violations. In July 2010,2013. Until CONSOB’s right is barred, CONSOB notified us that it had begun the preliminary investigation for its decision on these administrative proceedings and provided us with a preliminary investigation report in response to the defenses we submitted in January 2010. In August 2010, we submitted further defenses that CONSOB had to evaluate before imposingmay, at any possible administrative sanctions. In March 2011, CONSOB notified us of a resolution confirmingtime, confirm the occurrence of the asserted violation asserted in clause (i) above and applied a fine in the amount of €40,000, or approximately $55,000 converted using the currency exchange rate as of March 10, 2011, which we paid on April 5, 2011. CONSOB has not yet notified us of a resolution with respect to the violation asserted in clause (ii) above, but based on our assessment we believe the likelihood thatapply a pecuniary administrative sanction will be imposed on us forwithin the violation asserted in clause (ii) is probable.foregoing range. To date, we have not received any such notification.

OnIn April 14, 2009, December 21, 2009 and June 25, 2010, the Italian Tax Authority, or the ITA issued notices of assessment to CTI (Europe) based on the ITA’s audit of CTI (Europe)’s VAT returns for the years 2003, 2005, and 2006 and 2007. The ITA audits concluded that CTI (Europe) did not collect and remit VAT on certain invoices issued to non-Italian clients for services performed by CTI (Europe). The assessments, including interest and penalties, for the years 2003, 2005, 2006 and 2007 are €0.5 million, €5.5 million, €2.5 million and €0.8 million, or approximately $0.7 million, $7.2 million, $3.3 million and $1.1 million converted using the currency exchange rate as of December 31, 2012, respectively.million. We believe that the services invoiced were non-VAT taxable consultancy services and that the VAT returns are correct as originally filed. We are vigorously defending ourselves against the assessments both on procedural grounds and on the merits of the case.case, although we can make no assurances regarding the ultimate outcome of these cases. If the final decision of the lower tax courts (i.e. the Provincial Tax Court or the Regional Tax Court) or of the Supreme Court is unfavourableunfavorable to us, or if, in the interim, the ITA were to make a demand for payment and we were to be unsuccessful in suspending collection efforts, we may be requested to pay to the ITA an amount up to €9.4 million, or approximately $12.4$12.9 million converted using the currency exchange rate as of December 31, 2012,2013, plus collection fees, notification expenses and additional interest for the period lapsed between the date in which the assessments were issued and the date of effective payment.

2003 VAT.    OnIn September 13, 2011, the Provincial Tax Court issued decision no. 229/3/2011, which (i) fully accepted the merits of our appeal, (ii) declared that no penalties can be imposed against us and (iii) found the ITA liable to pay us €10,000, or approximately $13,000 converted using the currency exchange rate as of December 31, 2012, as partial refund of the legal expenses we incurred for our appeal. OnIn October 16, 2012, the ITA appealed against this decision. TheIn June 2013, the Regional Tax Court has scheduled a hearing for discussionissued decision no. 119/50/13, which accepted the appeal of the

merits ITA and reversed the previous decision of the 2003 VAT case on May 31, 2013.Provincial Tax Court. We plan to defend ourselves in front ofappeal such decision to the Regional TaxSupreme Court both on procedural grounds and on the merits of the case. On January 2, 2014, we were notified that the ITA has requested partial payment of the 2003 VAT assessment in the amount of €0.4 million (or $0.6 million upon conversion from euros as of December 31, 2013). We paid such amount in March 2014.

2005 VAT.    OnIn January 13, 2011, the Provincial Tax Court issued decision No. 4/2010 which (i) partially accepted our appeal and declared that no penalties can be imposed against us, (ii) confirmed the right of the ITA to reassess the VAT (plus interest) in relation to the transactions identified in the 2005 notice of assessment and (iii) repealed the suspension of the notice of deposit payment. TheBoth the ITA and CTI appealed to the higher court against the decision that no penalties could be imposed on us. We do not believe that the Provincial Tax Court has carefully reviewed all of our arguments, relevant documents and other supporting evidence that our counsel filed and presented during the hearing, including an appraisal from an independent expert. Accordingly, we also filed an appeal against the Provincial Tax Court’s decision. OnIn October 15, 2012, the Regional Tax Court issued a decision no. 127/31/2012, which (i) fully accepted the merits of our appeal and (ii) confirmed that no penalties can be imposed against us. TheOn April 15, 2013, the ITA is entitled to appeal suchappealed the decision to the Italian Supreme Court within six months. We paid the required VAT deposit including interest and collection fees of €2.1 million. On January 3, 2013, the ITA refunded the VAT deposit including interest and collection fees of €2.1 million, or approximately $2.8 million converted using the currency exchange rate as of December 31, 2012.Court.

2006 VAT.    OnIn October 18, 2011, the Provincial Tax Court issued decision no. 276/21/2011 (jointly with the 2007 VAT case) in which it (i) fully accepted the merits of our appeal, (ii) declared that no penalties can be imposed against us and (iii) found that for the 2006 and 2007 VAT cases the ITA was liable to pay us €10,000 or approximately $13,000 converted using the currency exchange rate as of December 31, 2012, as partial refund of the legal expenses incurred for the appeal. In MarchDecember 2011, we paidthe ITA appealed this decision to the ITARegional Tax Court. On April 16, 2013, the required deposit in respect of the 2006 VAT for an amount of €0.4 million, or approximately $0.6 million converted using the currency exchange as of December 31, 2012 (including 50% of the assessed VAT, interest and collection fees). After the Provincial Tax Court’s decision at the end of the first quarter 2012, the ITA issued an order of refund of the deposit amount. Such refund was offset with the additional deposit payment made in April 2012 for 2005 VAT (please refer to “2005 VAT” above). The ITA appealed to the higher court against this decision. The Regional Tax Court scheduled the first hearing for November 6, 2012issued decision no. 57/35/13 (jointly with the 2007 VAT case). We defended ourselves against in which it fully rejected the merits of the ITA’s appeal, beforedeclared that no penalties can be imposed against us and found the higher Regional Tax Court; to-date no courtITA liable to pay us €12,000, as partial refund of the legal expenses we incurred for this appeal. The ITA appealed such decision has been issued.in November 2013.

2007 VAT.    OnIn October 18, 2011, the Provincial Tax Court issued decision no. 276/21/2011 (jointly with the 2006 VAT case)case described above) in which the Provincial Tax Court (i) fully accepted the merits of our appeal, (ii) declared that no penalties can be imposed against us, and (iii) found that for 2006 and 2007 VAT cases the ITA was liable to pay us €10,000 or approximately $13,000 converted using the currency exchange rate as of December 31, 2012, as partial refund of the legal expenses incurred for the appeal. On September 26,In December 2011, we paidthe ITA appealed this decision to the Regional Tax Court. On April 10, 2013, the ITA refunded the requiredVAT deposit in respect of the 2007 VAT in the amount of €0.1 million, or approximately $0.1 million converted using the currency exchange rate as of September 26, 2011 (including 50% of the assessed VAT,including interest and collection fees). Afterfees of €0.1 million. On April 16, 2013, the Provincial Tax Court’s decision at the end of the first quarter 2012, the ITA issued an order of refund of the deposit amount. Such refund has been suspended by the collection agent due to an assessment of social contribution due for an amount equal to €0.1 million, or approximately $0.1 million converted using the currency exchange rate as of December 31, 2012. We do not believe this social contribution was due and we are in the process of resolving the issue with the social contribution authorities. The ITA appealed to the higher court against this decision. The Regional Tax Court scheduled the first hearing for November 6, 2012issued decision no. 57/35/13 (jointly with the 2006 VAT case). We defended against in which it fully rejected the merits of the ITA’s appeal, beforedeclared that no penalties can be imposed against us and found the higher Regional Tax Court, but no courtITA liable to pay us €12,000 as partial refund of the legal expenses we incurred for this appeal. The ITA appealed such decision has been issued.in November 2013.

OnIn August 3, 2009, SICOR Società Italiana Corticosteroidi S.R.L., or Sicor, filed a lawsuit in the Court of Milan to obtain the Court’s assessment that we were bound to source athe chemical compound, whose chemical name is BBR2778, from Sicor according to the terms of a supply agreement executed between Sicor and Novuspharma S.p.A, or Novuspharma, a pharmaceutical company located in Italy, on October 4, 2002. We are the successor in interest to such agreement by virtue of our merger with Novuspharma in January 2004. Sicor allegesalleged that the agreement was not terminated according to its terms. We assertasserted that the supply agreement in question was properly terminated and that we have no further obligation to comply with its terms. A hearing was held on January 21, 2010 to discuss preliminary matters and set a schedule for future filings and hearings. The parties filed the authorized pleadings and submitted toOn December 30, 2013, the Court their requests for evidence.

On November 11, 2010, a hearing was held to examineof Milan issued its decision and discuss the requests for evidence submitted by the parties in the briefs filed pursuant to article 183, paragraph 6rejected all of Sicor’s claims; this proceeding has therefore concluded. The decision of the Italian codeCourt of civil procedure. At the hearing held on November 11, 2010, the judge declared that the case does not require any discovery or evidentiary phase, and may be decided on the basis of the documents and pleadings already filed by the parties. At the hearing held on October 11, 2012 the parties informed the Court about the ongoing negotiations pending between the parties and asked the Court, accordingly,Milan is subject to postpone the case. At the request of the parties, the Court extended the final hearing until March 21, 2013. No estimate of a loss, if any, can be made at this time in the event that we do not prevail.

In March 2010, three purported securities class action complaints were filed against the Company and certain of our officers and directors in the United States District Court for the Western District of Washington. On August 2, 2010, Judge Marsha Pechman consolidated the actions, appointed lead plaintiffs, and approved lead plaintiffs’ counsel. On September 27, 2010, lead plaintiff filed an amended consolidated complaint, captioned Sabbagh v. Cell Therapeutics, Inc. (Case No. 2:10-cv-00414-MJP), naming the Company, Dr. James A. Bianco, Louis A. Bianco, and Craig W. Philips as defendants. The amended consolidated complaint alleges that defendants violated the federal securities laws by making certain alleged false and misleading statements related to the FDA approval process for PIXUVRI. The action seeks damages on behalf of purchasers of our stock during a purported class period of March 25, 2008 through March 22, 2010. On October 27, 2010, defendants moved to dismiss the amended consolidated complaint. On February 4, 2011, the Court denied in large part the defendants’ motion. Defendants answered the amended consolidated complaint on March 28, 2011, and discovery commenced, with trial set for June 25, 2012. On December 14, 2011, the parties filed a letter with the Court indicating they had agreed to the general terms of a settlement, and asking the Court to remove the case deadlines from the Court calendar. On February 14, 2012, plaintiffs filed a motion for preliminary approval of the settlement, along with related documents. On March 16, 2012, the Court granted preliminary approval of the settlement, granted conditional certification to the proposed class, and approved the proposed forms of notice to the class. A settlement hearing occurred on July 20, 2012. The Court entered a Final Judgment and Order of Dismissal with Prejudice on July 25, 2012. The negotiated terms of the settlement include a $19.0 million dollar settlement fund, which was paid by our insurance carriers. As a result, there is no estimated loss to us.potential appeal.

In April 2010, three shareholder derivative complaints were filed against the Companyus and certain of itsour officers and directors in the United StatesU.S. District Court for the Western District of Washington. These derivative complaints allegealleged that defendants breached their fiduciary duties to the Companyus by making or failing to prevent the issuance of certain alleged false and misleading statements related to the FDA approval process for PIXUVRI. The allegations inIn May 2010, the derivative actions are substantially similar to those in the securities action. On May 10, 2010, Judge Marsha Pechmanwere consolidated the shareholder derivative actions under the caption Shackleton v. Bauer (Caseas In re Cell Therapeutics, Inc. Derivative Litigation (Master Docket No. 2:10-cv-00414-MJP), and appointed the law firms of Robbins Umeda LLP (now Robbins Arroyo LLP) and Federman & Sherwood as co-lead counsel for derivative plaintiffs.10-cv-00564-MJP). Three more derivative complaints were filed in June, July and October 2010 and they havewere also been consolidated with Shackleton v. Bauer.In re Cell Therapeutics, Inc. Derivative Litigation. On November 6, 2012, co-lead counsel filed an executed Stipulation of Settlement, with attached exhibits, with the Court. On November 13, 2012, derivative plaintiffs filed an Unopposed Motion for Preliminary Approval of Settlement, along with related documents. The Court issued an Order Preliminarily Approving Settlement and Providing for Notice on December 26, 2012, scheduling aSettlement. A settlement hearing for March 22,occurred on May 31, 2013, at 10:00 a.m. In Februaryand the Court entered a Final Judgment and Order of Dismissal on May 31, 2013, co-lead counsel filed Plaintiffs’ Unopposed Motion for Final Approvalpursuant to which we were required to pay an aggregate of the Settlement and Plaintiffs’ Application for Attorney’s Fees, Reimbursement of Expenses, and Incentive Award, seeking up to $1.3$1.4 million in attorney’splaintiffs’ attorneys’ fees and reimbursement of $58,195.07 in expenses, and an incentive awardall of $1,500.00 for plaintiff Joseph Shackleton. We believe these fees and expenses will bewhich amount was covered by insurance. At this stage of the litigation, no probability of loss can be predicted in the event the settlement does not receive final approval.

In December 2011, we were informed of a decree by the Italian Ministry for Education, University and Research, or the Ministry, dated July 7, 2011 revoking a financial support granted to Novuspharma S.p.A. (now the Company, following the merger of Novuspharma into the Company in January 2004) in July 2002, or the

Financial Support, and requesting the repayment of the amount paid to Novuspharma as grant for the expenses (i.e. €0.5 million, plus interest for an additional amount of €0.1 million) by January 15, 2012, or the January Decree. The Financial Support was granted (following a proper application by Novuspharma) for a research project about new compounds for the treatment of tumors of the gastrointestinal area, or the Project. The initial amount of the Financial Support was (i) up to €2.3 million as a subsidized loan, and (ii) up to €2.5 million as a grant for expenses (a portion of which, corresponding to €0.5 million, was effectively paid to Novuspharma). Following the interruption of the Project in June 2004, due to unforeseeable technical reasons not ascribable to the beneficiary company, the Financial Support was reduced (i) to €0.6 million for the subsidized loan, and (ii) to €0.6 million for the grant for expenses. In 2005, we requested the Ministry to authorize the joint ownership of the Project by both Cell Therapeutics Europe S.r.l., or CTE, and our Italian branch. In May 2007, the Ministry accepted such joint ownership of the Project subject to the issuance of a guarantee, or the Guarantee, for the portion corresponding to the subsidized loan, but we never issued such Guarantee. In 2009, our Italian branch’s research activities were terminated. Since we assert that the January Decree is unlawful and that the relevant issuance represents a breach of the Ministry’s duty of good faith and an abuse of right, on February 13, 2012, we served a writ of summons upon the Ministry, suing it in the civil Court of Rome in order to have the January Decree declared ineffective. However, if we are unable to successfully defend ourselves against the January Decree issued by the Ministry, we may be requested to pay €0.6 million (i.e., the amount paid to Novuspharma as grant for the expenses plus interest, as described above), or approximately $0.8 million converted using the currency exchange rate as of December 31, 2012, plus counterparty’s attorney’s fees, litigation costs and additional default interest for the period lapsed between January 16, 2012 and the date of the effective payment. While the parties were engaged in pending settlement negotiations, (i) the Ministry interrupted the recovery process of the relevant financial support, and (ii) at the first hearing before the Court of Rome that took place on July 20, 2012, the Ministry failed to appear at the hearing, with the consequence that the Judge declared it in default of appearance, and we requested a postponement to continue the negotiations with the Ministry; the judge granted the postponement and the next hearing is now scheduled for April 5, 2013. On September 17, 2012, we were informed of a decree, dated August 27, 2012, issued by the General Director of the Ministry, or the August Decree, that is aimed at rectifying the January Decree and according to which the revocation will apply to only the portion of the relevant financial support that had never been requested by or granted to the Company (i.e., €0.2 million as subsidized loan and €0.1 million as grant for expenses, that we never received and therefore not obliged to return). Such decree dated August 27, 2012 was subject to the registration by the Court of Auditors (Corte dei Conti) that was performed on October 31, 2012. We are currently discussing with the Ministry the modalities to terminate the aforesaid legal suit, which is formally still pending before the Court of Rome. At this time, considering the contents of the aforementioned decree dated August 27, 2012, as well as its registration by the Court of Auditors, the likelihood of an unfavorable outcome of these legal proceedings is remote.insurance.

In July 2012, Chroma sent us a complaint was filed against us in the Superior Court of Washington for King County captioned GLY Construction Inc. v. Cell Therapeutics, Inc. and Selig Holdings Company (Case No. 12-2-22742-0 SEA), naming the Company and Selig Holdings Company as defendants. The complaint asserts claims for breach of contract, unjust enrichment/quantum meruit and lien foreclosure, and allegesletter claiming that we failed to pay certain amounts to plaintiffs for work performed for construction improvements totaling approximately $4.0 million. We contend that these amounts should be offset by amounts owed under the lease agreement with Selig Holdings Company. We asserted cross-claims for breach of contract and business devastation against Selig in the above-referenced lawsuit. These cross-claims were based on Selig’s refusal to pay amounts owed under the lease agreement, including amounts owed to GLY and other expenses incurred. GLY, Selig and the Company reached a settlement on all of GLY’s claims on or around September 4, 2012. The settlement included a partial lump sum payment with subsequent monthly payments from both Selig and us. We still have claims against Selig for amounts owed under the lease agreement, including portions of the settlement amount paid by us to GLY and are currently negotiating potential settlement solutions.

In March 2011, we entered into a license and co-development agreement, orbreached the Chroma License Agreement with Chroma Therapeutics, Ltd., or Chroma, providing us with exclusive marketing and co-development rights to Chroma’s drug candidate, tosedostat, in North, Central and South America. By a letter

dated July 18, 2012 Chroma notified us that Chroma alleges breaches under the Chroma License Agreement. Chroma asserts that we have not complied with the Chroma License Agreement because we madeby allegedly making decisions with respectas to the development of tosedostat without therequisite approval, of the joint committeesfailing to be established pursuant to the terms of the Chroma License Agreement, didhold certain meetings and not hold meetings of those committees and have not usedusing diligent efforts in the development ofto develop tosedostat. We dispute Chroma’s allegations and intend to vigorously defend our development activities and judgments.the allegations. In particular, we dispute

Chroma’s lack of diligence claim based in part on the appropriateness of completing the ongoing Phase 2 combination trials prior to developing a Phase 3 trial design. In addition, we believe that Chroma has failed to comply with its antecedent obligations with respect to the joint committeescertain of Chroma’s claims and failed to demonstrate an ability to manufacture tosedostat to the required standards under the terms of the Chroma License Agreement.standards. Under the Chroma License Agreement, there is a 90 day90-day cure period for any nonpayment default, which period shallmay be extended to 180 days if the party is using efforts to cure.in certain circumstances. A party may terminate the Chroma License Agreement for a material breach only after arbitration in accordance witharbitration. For the terms of the Chroma License Agreement. Effectiveperiod commencing September 25, 2012 we and Chroma entered intothrough June 25, 2013, a three month standstill with respect towas in effect between the parties’ respective claims underparties. Although the Chroma License Agreement, but otherwise reserving the parties’ respective rightsstandstill period has not been renewed, court proceedings have not been initiated as of the commencementtime of the standstill period. Effective December 25, 2012, the standstill was extended for an additional three months. The standstill is terminable by either party on one month’s notice.

On June 16, 2012, Craig W. Philips delivered notice of his intention to resign as our President, effective July 16, 2012. Mr. Philips claimed that his departure was a result of diminution of responsibilities and that he is entitled to the compensation for termination without cause as specified in his Employment Agreement. On July 16, 2012, Craig W. Philips resigned as our President. We entered into a Settlement Agreement and Full and Final Release of Claims, dated as of October 25, 2012 (the “Philips Settlement Agreement”), with Mr. Philips. Under the Philips Settlement Agreement, Mr. Philips is entitled to receive a severance payment of $435,500, with 25% of such amount to be paid within 30 days of the effective date and the balance of such amount to be paid in twelve monthly installments thereafter. We have also agreed to pay Mr. Philips’ premiums to continue his health coverage for 13 months following his termination. Mr. Philips’ equity awards granted by us and Aequus Biopharma, Inc., a subsidiary of the Company, to the extent then outstanding and unvested, terminated as of June 16, 2012. Pursuant to the Philips Settlement Agreement, Mr. Philips has agreed to vote the existing shares of the Company that he owns in a manner consistent with the recommendation of our board of directors through October 13, 2013. The Philips Settlement Agreement also includes a release by Mr. Philips of claims against us and certain non-competition and other restrictive covenants by Mr. Philips in favor of us.

On November 15, 2012, Daniel G. Eramian separated from employment with us as our Executive Vice President, Corporate Communications. We agreed on December 27, 2012 to enter into a Settlement Agreement and Full and Final Release of Claims (the “Eramian Settlement Agreement”) with Mr. Eramian. Under the Eramian Settlement Agreement, Mr. Eramian is entitled to receive total cash severance payments of approximately $567,238. Of the total payments, approximately $252,238 will be paid in May 2013, and the balance will be paid in twelve monthly installments following May 2013. We will also pay the premiums to continue Mr. Eramian’s health coverage and life insurance provided by us for up to 18 months following his termination. In addition, the Eramian Settlement Agreement provides for accelerated vesting of certain equity awards granted to Mr. Eramian by us that were otherwise unvested such that he became vested in 33,712 shares of our common stock, and we may either settle a portion of such shares in cash or reacquire a portion of such shares to satisfy applicable tax withholding obligations. Any rights of Mr. Eramian to other equity awards granted by us, to the extent otherwise unvested, terminated. The Eramian Settlement Agreement also includes a mutual release of claims by the parties and certain restrictive covenants by Mr. Eramian in favor of us.this filing.

In addition to the items discussed above, we are from time to time subject to legal proceedings and claims arising in the ordinary course of business, some of which may be covered in whole or in part by insurance.business.

 

Item 4.Mine Safety Disclosures

Not applicable.

PART II

 

Item 5.Market for Registrant’s Common Equity, Related Shareholder Matters and Issuer Purchases of Equity Securities

Our common stock is currently traded on The NASDAQ Capital Market under the symbol “CTIC” and the MTA in Italy, also under the ticker symbol “CTIC”. Prior to January 8, 2009, our common stock was traded on the NASDAQ Global Market. The following table sets forth, for the periods indicated, the high and low reported sales prices per share of our common stock as reported on theThe NASDAQ Capital Market, our principal trading market.

 

  High   Low   High   Low 

2011

    

First Quarter

  $16.50    $6.30  

Second Quarter

  $12.60    $7.35  

Third Quarter

  $8.45    $4.75  

Fourth Quarter

  $7.40    $4.75  

2012

        

First Quarter

  $8.25    $5.00    $8.25    $5.00  

Second Quarter

  $6.75    $2.80    $6.75    $2.80  

Third Quarter

  $3.94    $1.77    $3.94    $1.77  

Fourth Quarter

  $2.75    $1.14    $2.75    $1.14  

2013

    

First Quarter

  $1.71    $1.02  

Second Quarter

  $1.43    $1.02  

Third Quarter

  $1.80    $0.97  

Fourth Quarter

  $2.17    $1.49  

On February 22, 2013,24, 2014, the last reported sale price of our common stock on The NASDAQ Capital Market was $1.34$3.56 per share. As of February 22, 2012,24, 2014, there were 181188 shareholders of record of our common stock.

Dividend Policy

We have never declared or paid any cash dividends on our common stock and do not currently anticipate declaring or paying cash dividends on our common stock in the foreseeable future. We currently intend to retain all of our future earnings, if any, to finance operations. Any future determination relating to our dividend policy will be made at the discretion of our boardBoard of directorsDirectors and will depend on a number of factors, including future earnings, capital requirements, financial conditions, future prospects, contractual restrictions and other factors that our boardBoard of directorsDirectors may deem relevant.

Sales of Unregistered Securities

Not applicable.

Stock Repurchases in the Fourth Quarter

The following table sets forth information with respect to purchases of our common stock during the three months ended December 31, 2012:2013:

 

Period

  Total Number
of Shares
Purchased (1)
   Average
Price Paid
per Share
   Total Number
of Shares
Purchased as
Part of Publicly
Announced
Programs
   Maximum
Number of
Shares that
May Yet Be
Purchased
Under the
Plans or
Programs
 

October 1 – October 31, 2012

   1,549    $1.94     —       —    

November 1 – November 30, 2012

   3,742    $1.34     —       —    

December 1 – December 31, 2012

   —      $—       —       —    
  

 

 

   

 

 

   

 

 

   

 

 

 

Total

   5,291    $1.51     —       —    
  

 

 

   

 

 

   

 

 

   

 

 

 

Period

  Total Number
of Shares
Purchased (1)
   Average
Price Paid
per Share
   Total Number
of Shares
Purchased as
Part of Publicly
Announced
Programs
   Maximum
Number of
Shares that
May Yet Be
Purchased
Under the
Plans or
Programs
 

October 1 – October 31, 2013

   1,851    $1.90     —       —    

November 1 – November 30, 2013

   10,876    $1.74     —       —    

December 1 – December 31, 2013

   816    $1.91     —       —    
  

 

 

   

 

 

   

 

 

   

 

 

 

Total

   13,543    $1.77     —       —    
  

 

 

   

 

 

   

 

 

   

 

 

 

 

(1)Represents purchases of shares in connection with satisfying tax withholding obligations on the vesting of restricted stock awards to employees.

Stock Performance Graph

The following graph sets forth the cumulative total shareholder return of our common stock during the five-year period ended December 31, 2012,2013, as well as the NASDAQ Stock Index (U.S.) and the NASDAQ Pharmaceutical Index:

 

The stock performance graph assumes $100 was invested on December 31, 2007.2008. The actual returns shown on the graph above are as follows:

 

  3/31/08   6/30/08   9/30/08   12/31/08   3/31/09   6/30/09   9/30/09   12/31/09 

Cell Therapeutics, Inc.

  $35.11    $25.53    $3.89    $0.75    $271.43    $1,228.33    $878.57    $814.29  

NASDAQ Stock Index (U.S.)

  $86.11    $86.54    $80.48    $61.17    $96.87    $115.79    $134.02    $143.74  

NASDAQ Pharmaceutical Index

  $94.62    $96.81    $101.22    $93.04    $93.12    $101.69    $112.10    $112.36  
  3/31/09   6/30/09   9/30/09   12/31/09   3/31/10   6/30/10   9/30/10   12/31/10 

Cell Therapeutics, Inc.

  $2.02    $9.16    $6.55    $6.07    $385.71    $271.43    $278.57    $264.29  

NASDAQ Stock Index (U.S.)

  $59.26    $70.83    $81.98    $87.93    $151.95    $134.41    $151.13    $170.17  

NASDAQ Pharmaceutical Index

  $86.64    $94.62    $104.30    $104.55    $122.41    $104.91    $115.48    $121.80  
  3/31/10   6/30/10   9/30/10   12/31/10   3/31/11   6/30/11   9/30/11   12/31/11 

Cell Therapeutics, Inc.

  $2.88    $2.02    $2.08    $1.97    $264.29    $188.10    $126.19    $138.10  

NASDAQ Stock Index (U.S.)

  $92.95    $82.22    $92.45    $104.13    $178.51    $179.14    $157.85    $171.08  

NASDAQ Pharmaceutical Index

  $113.89    $97.61    $107.45    $113.33    $127.92    $136.25    $117.99    $130.38  
  3/31/11   6/30/11   9/30/11   12/31/11   3/31/12   6/30/12   9/30/12   12/31/12 

Cell Therapeutics, Inc.

  $1.97    $1.40    $0.94    $1.03    $157.14    $69.05    $57.62    $30.95  

NASDAQ Stock Index (U.S.)

  $109.23    $109.62    $96.59    $104.69    $207.55    $195.16    $207.92    $202.40  

NASDAQ Pharmaceutical Index

  $119.02    $126.77    $109.78    $121.31    $151.42    $159.95    $176.67    $173.46  
  3/31/12   6/30/12   9/30/12   12/31/12   3/31/13   6/30/13   9/30/13   12/31/13 

Cell Therapeutics, Inc.

  $1.17    $0.51    $0.43    $0.23    $27.38    $25.00    $38.57    $45.48  

NASDAQ Stock Index (U.S.)

  $124.76    $119.42    $127.23    $123.85    $219.98    $229.65    $254.03    $281.91  

NASDAQ Pharmaceutical Index

  $140.88    $148.82    $164.38    $161.38    $207.21    $221.14    $263.90    $285.96  

Item 6.Selected Financial Data

The data set forth below should be read in conjunction with Part II, Item 7, “Management’s Discussion and Analysis of Financial Condition and Results of Operations” and the Consolidated Financial Statements and Notes thereto appearing at Item 8 of this Annual Report on Form 10-K.

 

 Year ended December 31,  Year ended December 31, 
 2012 2011 2010 2009 2008  2013 2012 2011 2010 2009 
 (In thousands, except per share data)  (In thousands, except per share data) 

Consolidated Statements of Operations Data:

          

Revenues:

          

Product sales(1)

 $—     $—     $—     $—     $11,352  

Product sales, net(1)

 $2,314   $—     $—     $—     $—    

License and contract revenue(2)

  —      —      319    80    80    32,364    —      —      319    80  
 

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

 

Total revenues

  —      —      319    80    11,432    34,678    —      —      319    80  
 

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

 

Operating expenses, net:

     

Operating costs and expenses, net:

     

Cost of product sold(1)

  —      —      —      —      3,244    137    —      —      —      —    

Research and development

  33,201    34,900    27,031    30,179    51,614    33,624    33,201    34,900    27,031    30,179  

Selling, general and administrative

  38,244    38,290    51,546    57,725    41,607    42,288    38,244    38,290    51,546    57,725  

Acquired in-process research and development(2)(3)

  29,108    —      —      —      36    —      29,108    —      —      —    

Amortization of purchased intangibles

  —      —      —      —      1,658  

Restructuring charges and related gain on sale of assets, net(3)

  —      —      —      3,979    —    

Gain on sale of Zevalin(1)

  —      —      —      —      (9,444

Gain on sale of investment in joint venture(1)

  —      —      —      (10,244  —    

Restructuring charges and related gain on sale of assets, net

  —      —      —      —      3,979  

Gain on sale of investment in joint venture

  —      —      —      —      (10,244

Settlement expense (income)

  944    (11,000  145    4,710    3,393    155    944    (11,000  145    4,710  
 

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

 

Total operating expenses, net

  101,497    62,190    78,722    86,349    92,108  

Total operating costs and expenses, net

  76,204    101,497    62,190    78,722    86,349  
 

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

 

Loss from operations

  (101,497  (62,190  (78,403  (86,269  (80,676  (41,526  (101,497  (62,190  (78,403  (86,269
 

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

 

Other income (expense):

          

Investment and other income (expense), net

  (478  1,545    1,095    43    497    (546  (478  1,545    1,095    43  

Interest expense

  (56  (870  (2,208  (4,716  (8,507  (1,026  (56  (870  (2,208  (4,716

Amortization of debt discount and issuance costs

  —      (546  (768  (5,788  (66,530  (513  —      (546  (768  (5,788

Foreign exchange gain (loss)

  344    (558  (521  33    3,637    61    344    (558  (521  33  

Debt conversion expense

  —      —      (2,031  —      —      —      —      —      (2,031  —    

Make-whole interest expense

  —      —      —      (6,345  (70,243  —      —      —      —      (6,345

Gain on derivative liabilities, net

  —      —      —      7,218    69,739    —      —      —      —      7,218  

Gain (loss) on exchange of convertible notes

  —      —      —      7,381    (25,103

Gain on exchange of convertible notes

  —      —      —      —      7,381  

Equity loss from investment in joint venture

  —      —      —      (1,204  (123  —      —      —      —      (1,204

Milestone modification expense

  —      —      —      (6,000  —      —      —      —      —      (6,000

Write-off of financing arrangement costs

  —      —      —      —      (2,846
 

 

  

 

  

 

  

 

  

 

 

Net loss before noncontrolling interest

  (101,687  (62,619  (82,836  (95,647  (180,155  (43,550  (101,687  (62,619  (82,836  (95,647

Noncontrolling interest

  313    259    194    252    126    807    313    259    194    252  
 

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

 

Net loss attributable to CTI

 $(101,374 $(62,360 $(82,642 $(95,395 $(180,029 $(42,743 $(101,374 $(62,360 $(82,642 $(95,395

Gain on restructuring of preferred stock

  —      —      —      2,116    —      —      —      —      —      2,116  

Dividends and deemed dividends on preferred stock

  (13,901  (58,718  (64,918  (23,484  (22,878  (6,900  (13,901  (58,718  (64,918  (23,484
 

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

 

Net loss attributable to common shareholders

 $(115,275 $(121,078 $(147,560 $(116,763 $(202,907 $(49,643 $(115,275 $(121,078 $(147,560 $(116,763
 

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

 

Basic and diluted net loss per common share(4)

 $(1.98 $(3.53 $(6.47 $(7.64 $(210.05 $(0.43 $(1.98 $(3.53 $(6.47 $(7.64
 

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

 

Shares used in calculation of basic and diluted net loss per common share(4)

  58,125    34,294    22,821    15,279    966    114,195    58,125    34,294    22,821    15,279  
 

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

  

 

 

   December 31, 
   2012  2011  2010  2009  2008 
   (In thousands) 

Consolidated Balance Sheets Data:

      

Cash and cash equivalents

  $50,436   $47,052   $22,649   $37,811   $10,072  

Restricted cash (5)

   —      —      —      —      6,640  

Working capital

   37,644    33,291    (14,165  (21,694  (14,141

Total assets (6)

   73,713    62,239    53,592    69,595    64,243  

10% convertible senior notes

   —      —      —      —      19,784  

9% convertible senior notes

   —      —      —      —      4,104  

7.5% convertible senior notes

   —      —      10,215    10,102    32,601  

6.75% convertible senior notes

   —      —      —      —      6,926  

5.75% convertible senior notes

   —      —      12,093    11,677    23,808  

4.0% convertible senior subordinated notes

   —      —      —      40,363    55,150  

Current portion of long-term obligations

   393    970    1,717    1,312    757  

Long-term obligations, less current portion

   4,641    2,985    4,206    1,861    2,907  

Common stock purchase warrants

   13,461    13,461    13,461    626    —    

Series A 3% convertible preferred stock

   —      —      —      —      417  

Series B 3% convertible preferred stock

   —      —      —      —      4,031  

Series C 3% convertible preferred stock

   —      —      —      —      3,221  

Series D 7% convertible preferred stock

   —      —      —      —      734  

Series 14 convertible preferred stock

   —      6,736    —      —      —    

Accumulated deficit (6)

   (1,830,060  (1,714,785  (1,576,643  (1,429,083  (1,312,320

Total shareholders’ equity (deficit)

   32,944    28,009    (5,145  (18,769  (132,061
   December 31, 
   2013  2012  2011  2010  2009 
   (In thousands) 

Consolidated Balance Sheets Data:

      

Cash and cash equivalents

  $71,639   $50,436   $47,052   $22,649   $37,811  

Working capital

   60,446    37,644    33,291    (14,165  (21,694

Total assets(5)

   93,723    73,713    62,239    53,592    69,595  

7.5% convertible senior notes

   —      —      —      10,215    10,102  

5.75% convertible senior notes

   —      —      —      12,093    11,677  

4.0% convertible senior subordinated notes

   —      —      —      —      40,363  

Current portion of long-term debt(6)

   3,155    —      —      —      —    

Other current liabilities

   393    393    970    1,717    1,312  

Long-term debt, less current portion(6)

   10,152    —      —      —      —    

Other liabilities

   5,657    4,641    2,985    4,206    1,861  

Common stock purchase warrants

   13,461    13,461    13,461    13,461    626  

Series 14 convertible preferred stock

   —      —      6,736    —      —    

Accumulated deficit (5)

   (1,879,703  (1,830,060  (1,714,785  (1,576,643  (1,429,083

Total shareholders’ equity (deficit)

   42,758    32,944    28,009    (5,145  (18,769

 

(1)In 2008, we soldThe amounts relate to commercial sales of our product Zevalin to RIT Oncology, our 50/50 joint venture with Spectrum Pharmaceuticals, Inc., or Spectrum. We subsequently sold our 50% interest in RIT Oncology to Spectrum in March 2009.PIXUVRI.
(2)The amount in 2013 primarily relates to the license and development services revenue recognized in connection with the collaboration agreement with Baxter. See Note 14 of the Notes to Consolidated Financial Statements for additional information.
(3)Acquired in-process research and development in 2012 represents the purchase of assets from S*BIO, which had not reached technological feasibility at the time of the acquisition. See Note 45 of the Notes to Consolidated Financial Statements for additional information.
(3)The 2009 amount primarily relates to the closure of our Bresso, Italy operations as well as the termination of Zevalin-related employees.
(4)The net loss per share calculation, including the number of shares used in basic and diluted net loss per share, has been adjusted to reflect one-for-ten, one-for-six and one-for-five reverse stock splits on August 31, 2008 and May 15, 2011 and September 2, 2012, respectively. See Notes 1 and 1719 of the Notes to Consolidated Financial Statements for a description of the computation of the number of shares and net loss per share.
(5)The 2008 amount represents cash held in escrow to fund potential make-whole payments on certain of our convertible senior notes.
(6)Effective January 1, 2011, we adopted new guidance on goodwill impairment. See Note 34 of the Notes to Consolidated Financial Statements for additional information.
(6)In March 2013, we entered into a Loan and Security Agreement with Hercules Technology Growth Capital, Inc. for a senior secured term loan. See Note 10 of the Notes to Consolidated Financial Statements for additional information.

Item 7.Management’s Discussion and Analysis of Financial Condition and Results of Operations

This Annual Report on Form 10-K, including the following discussion, contains forward-looking statements, which involve risks and uncertainties and should be read in conjunction with the Selected Consolidated Financial Data and the Consolidated Financial Statements and the related Notes included in Items 6 and 8 of Part II of this Annual Report on Form 10-K. When used in this Annual Report on Form 10-K, terms such as “anticipates,” “believes,” “continue,” “could,” “estimates,” “expects,” “intends,” “may,” “plans,” “potential,” “predicts,” “should,” or “will” or the negative of those terms or other comparable terms are intended to identify such forward-looking statements. Such statements, which include statements concerning product sales, research and development expenses, selling, general and administrative expenses, additional financingscapital raising activities and additional losses, are subject to known and unknown risks and uncertainties, including, but not limited to, those discussed below and elsewhere in this Annual Report on Form 10-K, particularly in “Factors Affecting Our Operating Results and Financial Condition,” that could cause actual results, levels of activity, performance or achievements to differ significantly from those projected. Although we believe that expectations reflected in the forward-looking statements are reasonable, we cannot guarantee future results, levels of activity, performance or achievements. We will not update any of the forward-looking statements after the date of this Annual Report on Form 10-K to conform these statements to actual results or changes in our expectations. Readers are cautioned not to place undue reliance on these forward-looking statements, which apply only as of the date of this Annual Report on Form 10-K.

Overview

We are a biopharmaceutical company focused on the acquisition, development and commercialization of less toxic and more effective ways to treat cancer. Our goal is to build a profitable company by generating income from products we develop and commercialize, either alone or with one or more potential strategic partners. We are currently concentrating our efforts on treatments that target blood-related cancers where there is a highan unmet medical need. We are primarily focused on commercializing PIXUVRI® (pixantrone) in the European Union, or the E.U., for multiply relapsed or refractory aggressive non-Hodgkin lymphoma, or NHL, and conducting a Phase 3 clinical trial program of pacritinib for the treatment of myelofibrosis. For an overviewmyelofibrosis that will support regulatory submission for approval in the U.S. and Europe.

Following is a summary of additional information relating to our present business, including PIXUVRI andthe key elements of our product development programs,and product candidate portfolio and certain financial information. For additional details pertaining to these matters, please see the discussion in “Item 1. Business—Overview.Part I, Item 1, “Business.

Our most clinically advanced compound is PIXUVRI. PIXUVRI

PIXUVRI is a novel aza-anthracenedione derivative that is structurally related to anthracyclines and anthracenediones, but does not appear to be associated with the same level of cardiotoxic effects. In May 2012, the European Commission granted conditional marketing authorization in the E.U. of PIXUVRI as a monotherapy for the treatment of adult patients with multiply relapsed or refractory aggressive NHL. PIXUVRI is the first approved treatment in the E.U. for patients with multiply relapsed or refractory aggressive B-cell NHL who have failed two or three prior lines of therapy. In connection with the conditional marketing authorization, we are conducting the required post-approval commitment trial, which compares pixantrone and rituximab with gemcitabine and rituximab in the setting of aggressive B-cell NHL.

As of the date of this filing, PIXUVRI was structurally designed so that it cannot bind ironavailable in Austria, Denmark, Finland, Germany, Italy, France, Netherlands, Norway, Sweden and perpetuate oxygen radical productionthe U.K. We have established a commercial organization, including sales, marketing, supply chain management and reimbursement capabilities to commercialize PIXUVRI in the E.U. PIXUVRI is not approved in the U.S. We are pursuing potential partners for commercializing PIXUVRI in other markets outside the E.U. and the U.S.

In almost all European markets, pricing and availability of prescription pharmaceuticals are subject to governmental control. Decisions by governmental authorities will impact the price and market acceptance of PIXUVRI. Accordingly, any future revenues are dependent on market acceptance of PIXUVRI, the

reimbursement decisions made by the governmental authorities in each country where PIXUVRI is available for sale and other factors. In the third quarter 2013, PIXUVRI was granted market access in Italy and France. In December 2013, we reached agreement for funding and reimbursement with the National Association of Statutory Health Insurance Funds, or form a long-lived hydroxyl metabolite—both ofthe GKV-Spitzenverband, in Germany. In February 2014, PIXUVRI received final guidance for funding and reimbursement from the National Institute for Health and Care Excellence, or NICE, in England/Wales.

In January 2014, we reached an agreement with Novartis to reacquire rights to PIXUVRI, as well as Opaxio. In exchange for Novartis’ agreement to return such rights to us, which arewe had previously granted to Novartis in September 2006, we agreed to make certain potential payments to Novartis. For additional information on this agreement, please see the putative mechanisms for anthracycline-induced acutediscussion in Part I, Item 1, “Business—License Agreements and chronic cardiotoxicity.Additional Milestone Activities—Novartis.”

Pacritinib

In May 2012, we expanded our late-stage pipeline of product candidates with the acquisition of pacritinib, an oral, once-daily JAK2JAK2/FLT3 inhibitor that demonstrated meaningful clinical benefits and good tolerability in myelofibrosis patients in Phase 2 clinical trials. Myelofibrosis is a blood-related cancer caused by the accumulation of malignant bone marrow cells that triggers an inflammatory response, scarring the bone marrow and limiting its ability to produce red blood cells prompting the spleen and liver to take over this function. Symptoms that arise from this disease include enlargement of the spleen, anemia, extreme fatigue and pain. We believe pacritinib may offer an advantage over other JAK inhibitors through effective relief of symptoms with less treatment-emergent thrombocytopenia and anemia.

In November 2013, we entered into a worldwide license agreement with Baxter to develop and commercialize pacritinib. Pursuant to the Baxter Agreement, we have joint commercialization rights with Baxter for pacritinib in the U.S., while Baxter has exclusive commercialization rights for all indications outside the U.S. Under the terms of the Baxter Agreement, we received a $60 million upfront payment, which includes an equity investment of $30 million, and potential to receive $302 million in clinical, regulatory, commercial launch and sales milestones. Additionally, we will share U.S. profits equally and will receive royalties on net sales of pacritinib in the non-U.S. markets. We initiatedwill be responsible for U.S. and E.U. development costs incurred on or after January 1, 2014 of approximately $96 million, which we expect will be partially offset by up to $67 million in potential cash milestone progress payments from Baxter through 2015, with additional success based milestone payments possible thereafter. For additional information on our agreement with Baxter, please see the firstdiscussion in Part I, Item 1, “Business—Overview,” and Part I, Item 1, “Business—License Agreements and Additional Milestone Activities—Baxter.”

As part of the new collaboration with Baxter, we are pursuing a broad approach to advancing this therapy for myelofibrosis patients through two Phase 3 clinical trials: one in a broad set of patients without limitations on blood platelet counts, the PERSIST-1 trial, in myelofibrosiswhich was initiated in January 2013 and plan to initiate a second Phase 3 trialthe other in the second half of 2013.

In May 2012, the European Commission, or the E.C., granted conditional marketing authorization in the European Union, or the E.U., of PIXUVRI as a monotherapy for the treatment of adult patients with multiply relapsed or refractory aggressive non-Hodgkin lymphoma, or NHL. PIXUVRI islow platelet counts, the first approved treatmentPERSIST-2 trial, which opened for patients with multiply relapsed or refractory aggressive B-cell NHL. This approval was based on the results from

enrollment in March 2014.

Financial summary

our pivotal Phase 3 clinical trial known as EXTEND or PIX301. In connection with the conditional marketing authorization, we are required to conduct a post-approval trial that is intended to confirm PIXUVRI’s clinical benefit. WeOur product sales are currently accruing patients into a Phase 3 clinical trial comparing pixantrone and rituximab with gemcitabine and rituximab ingenerated solely from the settingsales of aggressive B-cell NHL.

In September 2012, we began making PIXUVRI available for commercial sale in the E.U. PIXUVRI is currently available in eight countries: Austria, Denmark, Finland, Germany, Netherlands, Norway, Sweden and the United Kingdom. We plan to extend the availability of PIXUVRI to France, Italy and Spain, as well as other European countries, in 2013. We have established a commercial organization, including sales, marketing, supply chain management, reimbursement capabilities, to commercialize PIXUVRI in the E.U. We are pursuing potential partners for commercializing PIXUVRIrecorded $0.5 million in other markets outside the E.U. and the United States (U.S.). PIXUVRI is not yet approved in the United States.

We began commercializing PIXUVRI in September 2012 and the commercial potential of and our ability to successfully commercialize PIXUVRI is unknown. Our success in commercializing PIXUVRI will require, among other things, effective sales, marketing, manufacturing, distribution, information systems and pricing strategies, as well as compliance with applicable laws and regulations. The E.C. granted conditional marketing authorization of PIXUVRI, which means that we are, among other things, obligated to conduct specific post-approval clinical trials to confirm patient benefit as a condition of that approval. In connection with the conditional marketing authorization, we are required to conduct a post- approval trial that is intended to confirm PIXUVRI’s clinical benefit. In order to do this, we will be required to conduct an additional clinical trial and, if successful, we intend to seek additional regulatory approvals. These activities will require substantial amounts of capital and may not ultimately prove successful. Further, our other product candidate, pacritinib, is in late-stage development. PIXUVRI will require significant further development, financial resources and personnel to obtain regulatory approval and develop into commercially viable products, if at all. Accordingly, over the next several years, we expect that we will incur substantial expenses, primarily as a result of activities related to the commercialization and continued development of PIXUVRI and pacritinib. We will also continue to invest in clinical development and manufacturing of our other product candidates. Our commitment of resources to the continuing development, regulatory and commercialization activities for PIXUVRI and the research, continued development and manufacturing of our other product candidates may require us to raise substantial amounts of additional capital and our operating expenses will fluctuate as a result of such activities. In addition, we may incur significant milestone payment obligations as our product candidates progress through clinical trials towards potential commercialization.

We are very early in the product launch and our future PIXUVRItotal net product sales revenue cannot be accurately predicted.for the fourth quarter of 2013 and $2.3 million for the full-year ended December 31, 2013. Our product sales revenue may vary significantly from period to period as the launch progresses.commercialization and reimbursement negotiations for PIXUVRI progress. Our income from operations for the fourth quarter was $10.3 million and a loss of $41.5 million for the full-year ended December 31, 2013 compared to a loss of $18.9 million and $101.5 million respectively for the same periods in 2012. Our results of operations may vary substantially from year to year and from quarter to quarter and, as a result, we believe that period to period comparisons of our operating results may not be meaningful and you should not rely on them as being indicative of our future performance.

Financial summary

We began to make PIXUVRI commercially available in the E.U. during the fourth quarter

As of 2012, and expect to recognize revenue beginning in the first quarter of 2013. We ended 2012 withDecember 31, 2013, we had cash and cash equivalents of $50.4$71.6 million. See the discussion in Part II, Item 8, “Financial Statements and Supplementary Data” for further information relating to our senior secured term loan agreement.

Results of Operations

Years ended December 31, 2013 and 2012.

Product sales, net.    Net product sales for the year ended December 31, 2013 were $2.3 million from the sales of PIXUVRI. There were no product sales of PIXUVRI for the year ended December 31, 2012, as the European Commission granted conditional marketing authorization of PIXUVRI in May 2012, and 2011.CTI was dependent on governmental authorities in each country for pricing and market acceptance of PIXUVRI. We sell PIXUVRI directly to health care providers and through a limited number of wholesale distributors in the E.U. We generally record product sales upon receipt of the product by the health care provider or distributor at which time title and risk of loss pass. Product sales are recorded net of distributor discounts, estimated government-mandated rebates, trade discounts and estimated product returns. Any future revenues are dependent on market acceptance of PIXUVRI, the reimbursement decisions made by governmental authorities in each country where PIXUVRI is available for sale and other factors.

A reconciliation of gross to net product sales for the year ended December 31, 2013 (in thousands) follows.

   2013(1) 

Product sales, gross

  $2,935  

Discounts, rebates and other adjustments

   (582

Returns reserve

   (39
  

 

 

 

Product sales, net

  $2,314(2) 
  

 

 

 

(1)Fiscal 2012 has been omitted from this table, as there were no product sales during such year.
(2)Of our product sales, 67 percent was made to a single customer. See Note 18 to the Notes to Consolidated Financial Statements for additional information relating to our customer concentration.

As of December 31, 2013, the balance from activity in returns, discounts and rebates is reflected inaccounts receivable and accrued expenses. Balances and activity for the components of our gross to net sales adjustments for the year ended December 31, 2013 are as follows (in thousands):

   Product
returns
   Discounts,
rebates
and other
  Total 

Balance at December 31, 2012(1)

   —       —      —    

Provision for current year sales

   39     582    621  

Adjustments for prior period sales

   —       —      —    

Payments/credits for current year sales

   —       (405  (405

Payments/credits for prior period sales

   —       —      —    
  

 

 

   

 

 

  

 

 

 

Balance at December 31, 2013

  $39    $177   $216  
  

 

 

   

 

 

  

 

 

 

(1)Fiscal 2012 has been omitted from this table, as there were no product sales during such year.

License and contract revenue.    License and contract revenue for the year ended December 31, 2013 was related to $27.4 million of license and development services revenue recognized in connection with the collaboration agreement with Baxter (see Note 14 to the Notes to Consolidated Financial Statements) as well as the $5.0 million milestone payment received from Teva upon the achievement of a worldwide net sales milestone of TRISENOX. There was no license and contract revenue for the same period in 2012.

Cost of product sold.    Cost of product sold for the year ended December 31, 2013 was $0.1 million related to sales of PIXUVRI. There were no product sales or related cost of product sold for the same period in 2012. We began capitalizing costs related to the production of PIXUVRI in February 2012 upon receiving a positive opinion for conditional approval by The Committee for Medicinal Products for Human Use, or the CHMP, which is a committee of the EMA. The manufacturing costs of PIXUVRI product prior to receipt of the CHMP’s positive opinion were expensed as research and development as incurred. While we tracked the quantities of individual PIXUVRI product lots, we did not track manufacturing costs prior to capitalization, and therefore, the manufacturing costs of PIXUVRI produced prior to capitalization are not reasonably determinable. Most of this reduced-cost inventory is expected to be available for us to use commercially. The timing of the sales of such reduced-cost inventory and its impact on gross margin is dependent on the level of PIXUVRI sales as well as our ability to utilize this inventory prior to its expiration date. We expect that our cost of product sold as a percentage of product sales will increase in future periods as PIXUVRI product manufactured and expensed prior to capitalization is sold. At this time, we cannot reasonably estimate the timing or rate of consumption of reduced-cost PIXUVRI product manufactured and expensed prior to capitalization.

Research and development expenses.Our research and development expenses for our current compounds under development and preclinical development were as follows (in thousands):

 

  2012   2011   2013   2012 

Compounds under development:

        

PIXUVRI

  $8,801    $11,266    $3,889    $8,801  

Pacritinib

   2,217     —       10,466     2,217  

Opaxio

   1,322     1,445     1,127     1,322  

Tosedostat

   2,824     6,955     985     2,824  

Brostallicin

   234     75     24     234  

Other compounds

   150     180  

Operating expenses

   17,653     14,975     16,711     17,653  

Research and preclinical development

   —       4     422     150  
  

 

   

 

   

 

   

 

 

Total research and development expenses

  $33,201    $34,900    $33,624    $33,201  
  

 

   

 

   

 

   

 

 

Costs for our compounds under development include external direct expenses such as principal investigator fees, clinical research organization charges and contract manufacturing fees incurred for preclinical, clinical, manufacturing and regulatory activities associated with preparing the compounds for submissions of NDAs or similar regulatory filings to the FDA, the EMA or other regulatory agencies outside the United StatesU.S. and Europe, as well as upfront license fees for acquired technology. Subsequent to receiving a positive opinion for conditional approval of PIXUVRI in the E.U. from the EMA’s CHMP, costs associated with commercial batch production, quality control, stability testing, and certain other manufacturing costs of PIXUVRI were capitalized as inventory. Operating expenses include our personnel and an allocation of occupancy, depreciation and amortization expenses associated with developing these compounds. Research and preclinical development costs primarily include costs associated with bisplatinates development as well as external laboratory services associated with other compounds. We do not allocate operating expenses to the individual compounds under development as our accounting system does not track these costs by individual compound. As a result, we are not able to capture the total cost of each compound. Direct externalcompound because we do not allocate operating expenses to all of our compounds. External direct costs incurred to dateby us as of December 31, 2013 were $86.2 million for PIXUVRI pacritinib, Opaxio, tosedostat and brostallicin are $82.3 million, $2.2 million, $225.8 million, $9.8 million and $9.6 million, respectively. Costs for PIXUVRI(excluding costs prior to our merger with Novuspharma S.p.A, a public pharmaceutical company located in Italy, or CTI (Europe), in January 2004 are excluded from this amount. Costs2004), $12.7 million for pacritinib (excluding costs for pacritinib prior to our acquisition of certain assets from S*BIO in May 2012 are also excludedand $29.1 million of in-process research and development expenses associated with the acquisition of certain assets from this amount. CostsS*BIO), $227.0 million for Opaxio, $10.8 million for tosedostat (excluding costs for tosedostat prior to our co-development and license agreement with Chroma are also excluded from this amount. CostsChroma) and $9.6 million for brostallicin (excluding costs for brostallicin prior to our acquisition of SMSystems Medicine, LLC in July 20072007).

Research and development expenses increased to $33.6 million for the year ended December 31, 2013 from $33.2 million for the year ended December 31, 2012. PIXUVRI costs decreased primarily due to a reduction in clinical development costs associated with the PIX306 trial, our on-going confirmatory trial in the E.U., as well as a reduction in regulatory consulting costs. These decreases were partially offset by an increase in medical affairs and pharmacovigilance activities in the E.U. Costs for pacritinib increased primarily due to clinical

development costs associated with site initiation, patient enrollment and other costs associated with the PERSIST-1 trial, in addition to start-up costs associated with the PERSIST-2 trial. Costs associated with pacritinib manufacturing also increased between periods. Costs for our Opaxio program decreased primarily due to an adjustment in clinical development milestone activity associated with a contract amendment related to the GOG-0212 trial of Opaxio in patients with ovarian cancer, in addition to a reduction in patient enrollment in ISTs. Development costs for tosedostat decreased primarily due to the compound being placed on partial clinical hold which was lifted in December 2013. Operating expenses included in research and development expenses decreased primarily due to a reduction in occupancy costs associated with the relocation of our corporate office. This decrease was partially offset by an increase in noncash share-based compensation expense, employee termination costs and other personnel related expenses.

Regulatory agencies, including the FDA and EMA, regulate many aspects of a product candidate’s life cycle, including research and development and preclinical and clinical testing. We will need to commit significant time and resources to develop our current and any future product candidates. Our drug candidates pacritinib, tosedostat and Opaxio are currently in clinical development, and our product PIXUVRI, which is currently being commercialized in parts of Europe, is undergoing a post-approval commitment study. Many drugs in human clinical trials fail to demonstrate the desired safety and efficacy characteristics. We are unable to provide the nature, timing and estimated costs of the efforts necessary to complete the development of pacritinib, tosedostat and Opaxio, and to complete the post-approval commitment study of PIXUVRI, because, among other reasons, we cannot predict with any certainty the pace of patient enrollment of our clinical trials, which is a function of many factors, including the availability and proximity of patients with the relevant condition. We rely on third parties to conduct clinical trials, which may result in delays or failure to complete trials if the third parties fail to perform or meet applicable standards. Even after a clinical trial is enrolled, preclinical and clinical data can be interpreted in different ways, which could delay, limit or preclude regulatory approval and advancement of this compound through the development process. We or regulatory authorities may suspend clinical trials at any time on the basis that the participants are being exposed to unacceptable health risks. Even if our drugs progress successfully through initial human testing in clinical trials, they may fail in later stages of development. A number of companies in the pharmaceutical industry, including us, have suffered significant setbacks in advanced clinical trials, even after reporting promising results in earlier trials. For these reasons, among others, we cannot estimate the date on which clinical development of our product candidates will be completed, if ever, or when we will generate material net cash inflows from PIXUVRI or be able to begin commercializing pacritinib, Opaxio and tosedostat to generate material net cash inflows. In order to generate revenue from these products, our product candidates need to be developed to a stage that will enable us to commercialize, sell or license related marketing rights to third parties.

We also excludedenter into collaboration agreements for the development and commercialization of our product candidates. We cannot control the amount and timing of resources our collaborators devote to product candidates, which may also result in delays in the development or marketing of products. Because of these risks and uncertainties, we cannot accurately predict when or whether we will successfully complete the development of our product candidates or the ultimate product development cost.

The risks and uncertainties associated with completing development on schedule and the consequences to operations, financial position and liquidity if the project is not timely completed are discussed in more detail in the following risk factors, which begin on page 21 of this Annual Report on Form 10-K: “We may take longer to complete our clinical trials than we expect, or they may not be completed at all.”; “We or our collaboration partners may not obtain or maintain the regulatory approvals required to commercialize some or all of our products.”; “Even if our drug candidates are successful in clinical trials and receive regulatory approvals, we or our collaboration partners may not be able to successfully commercialize them.”; “Even if our products receive regulatory approval, we will be subject to ongoing obligations and continued regulatory review by the FDA, the EMA and other foreign regulatory agencies, as applicable, and may be subject to additional post-marketingobligations, all of which may result in significant expense and limit commercialization of our other products, including PIXUVRI.”; and “Our financial condition may be harmed if third parties default in the performance of contractual obligations.

Selling, general and administrative expenses. Selling, general and administrative expenses increased to $42.3 million for the year ended December 31, 2013 from this amount.$38.2 million for the year ended December 31, 2012. This increase was primarily due to a $3.8 million increase in selling and marketing expenses for PIXUVRI in the E.U., a $1.3 million increase in compensation and benefits mainly related to an increase in the average number of personnel between comparable periods and a $0.7 million increase in noncash share-based compensation. These increases were partially offset by a $1.0 million decrease in administrative costs and a $0.7 million decrease in legal and patent services.

Acquired in-process research and development.Acquired in-process research and development for the year ended December 31, 2012 relates to charges of $29.1 million recorded in connection with our acquisition of assets from S*BIO in May 2012. There was no acquired in-process research and development expense for the corresponding period in 2013.

Settlement expense (income).For the year ended December 31, 2013, we recorded $0.2 million in settlement expense related to an agreement entered into with one of our former executive officers for severance payments and related benefits upon such officer’s separation from us in the prior year and attorneys’ fees in connection with a shareholder lawsuit. For the year ended December 31, 2012, we recorded $0.9 million in settlement expense related to agreements entered into with two of our former executive officers for severance payments and related benefits upon their separation from us in the year ended December 31, 2012.

Investment and other income (expense), net. The expense amount for the year ended December 31, 2013 is primarily related to the change in fair value of the warrant issued to Hercules Technology Growth Capital, Inc. and loss on disposal of property and equipment. The expense amount for the year ended December 31, 2012 is primarily related to the change in Series 15 warrant liability and loss on disposal of property and equipment.

Interest expense.Interest expense increased to $1.0 million for the year ended December 31, 2013 from $0.1 million for the year ended December 31, 2012 primarily due to interest incurred on our long-term debt issued in 2013.

Amortization of debt discount and issuance costs.Amortization of debt discount and issuance costs of $0.5 million for year ended December 31, 2013 is related to our long-term debt issued in 2013. We had no similar costs for the corresponding period in 2012.

Foreign exchange gain (loss). Foreign exchange gain for the year ended December 31, 2013 and gain for the year ended December 31, 2012 are due to fluctuations in foreign currency exchange rates, primarily related to payables and receivables in our European branches and subsidiaries denominated in foreign currencies.

Dividends and deemed dividends on preferred stock.Dividends and deemed dividends on preferred stock were approximately $6.9 million for the year ended December 31, 2013 related to the issuance of our Series 18 preferred stock. Dividends and deemed dividends on preferred stock were approximately $13.9 million for the year ended December 31, 2012 related to the issuances of our Series 15-1, 15-2 and 17 preferred stock.

Years ended December 31, 2012 and 2011.

Research and development expenses. Our research and development expenses for compounds under development and preclinical development were as follows (in thousands):

   2012   2011 

Compounds under development:

    

PIXUVRI

  $8,801    $11,266  

Pacritinib

   2,217     —    

Opaxio

   1,322     1,445  

Tosedostat

   2,824     6,955  

Brostallicin

   234     75  

Operating expenses

   17,653     14,975  

Research and preclinical development

   150     184  
  

 

 

   

 

 

 

Total research and development expenses

  $33,201    $34,900  
  

 

 

   

 

 

 

Research and development expenses decreased to $33.2 million for the year ended December 31, 2012 from $34.9 million for the year ended December 31, 2011. PIXUVRI costs decreased primarily due to a decrease in clinical development activity associated with the completion of the EXTEND and RAPID trials in addition to a decrease in manufacturing activities. Costs for pacritinib primarily relate to clinical development activity associated with the initiation of our PERSIST-1 trial. Costs for our Opaxio program decreased primarily due to a reduction in clinical development and manufacturing activities, partially offset by an increase in investigator-sponsored trialIST enrollment. Costs for tosedostat during 2011 primarily related to the $5.0 million upfront payment upon execution of the co-development and license agreement with Chroma. Our share of development costs associated with activity incurred under the agreement increased during 2012 primarily due to an increase in manufacturing activities. Costs for brostallicin increased primarily due to an increase in manufacturing activity. Our operatingOperating expenses included in research and development expenses increased primarily due to an increase in the average number of personnel between periods and an increase in noncash share-based compensation expense, in addition to increases in occupancy expense and consulting activities. These increases were partially offset by a decrease in discretionary bonus expense.

Our lead drug candidates, PIXUVRI, pacritinib, Opaxio, tosedostat and brostallicin, are currently in clinical trials. Many drugs in human clinical trials fail to demonstrate the desired safety and efficacy characteristics. Even if our drugs progress successfully through initial human testing, they may fail in later stages of development. A

number of companies in the pharmaceutical industry, including us, have suffered significant setbacks in advanced clinical trials, even after reporting promising results in earlier trials. Regulatory agencies, including the FDA and EMA, regulate many aspects of a product candidate’s life cycle, including research and development and preclinical and clinical testing. We, or regulatory authorities, may suspend clinical trials at any time on the basis that the participants are being exposed to unacceptable health risks. Completion of clinical trials depends on, among other things, the number of patients available for enrollment in a particular trial, which is a function of many factors, including the availability and proximity of patients with the relevant condition. We rely on third parties to conduct clinical trials, which may result in delays or failure to complete trials if the third parties fail to perform or meet applicable standards. We have drug candidates that are still in research and preclinical development, which means that they have not yet been tested on humans. We will need to commit significant time and resources to develop these and additional product candidates.

Our products will be successful and we will be able to generate revenues only if:

our product candidates are developed to a stage that will enable us to commercialize, sell, or license related marketing rights to third parties; and

our product candidates, if developed, are approved.

Failure to generate such revenues may preclude us from continuing our research, development and commercial activities for these and other product candidates. We also enter into collaboration agreements for the development and commercialization of our product candidates. We cannot control the amount and timing of resources our collaborators devote to product candidates, which may also result in delays in the development or marketing of products.

Selling, general and administrative expenses. Selling, general and administrative expenses decreased to $38.2 million for the year ended December 31, 2012 from $38.3 million for the year ended December 31, 2011. This decrease was in part due to a $3.8 million decrease in legal costs primarily as a result of our settlement with The Lash Group, Inc. in 2011 and a $3.4 million decrease related to reversal of our provision for VAT assessments associated with our CTI (Europe) operations. These decreases were partially offset by a $4.1 million increase in consulting and other professional services mainly associated with the commercial launch of PIXUVRI in the E.U. and a $2.3 million increase in noncash share-based compensation.

Acquired in-process research and development.Acquired in-process research and development for the year ended December 31, 2012 relates to charges of $29.1 million recorded in connection with our acquisition of assets from S*BIO in May 2012. There was no acquired in-process research and development expense for the corresponding period in 2011.

Settlement expense (income).For the year ended December 31, 2012, we recorded $0.9 million in settlement expense related to agreements entered into with two of our former executive officers for severance payments and related benefits upon their separation from us in the year ended December 31, 2012. We recorded $11.0 million in settlement income for the year ended December 31, 2011 resulting from our settlement with The Lash Group, Inc.

Investment and other income (expense), net.Investment and other income (expense) decreased to a $0.5 million expense for the year ended December 31, 2012 as compared to $1.5 million in income for the year ended

December 31, 2011. The expense amount for the year ended December 31, 2012 is primarily related to the change in Series 15 warrant liability and loss on disposal of property and equipment. The income amount for the year ended December 31, 2011 is primarily related to the retirement of our 5.75%5.75 percent convertible senior notes in December 2011 resulting from the difference in the carrying amount and the outstanding principal balance at maturity.

Interest expense.Interest expense decreased to $0.1 million for the year ended December 31, 2012 from $0.9 million for the year ended December 31, 2011. This decrease is primarily due to maturity of our 7.5%7.5 percent convertible senior notes in April 2011 and 5.75%5.75 percent convertible senior notes in December 2011.

Amortization of debt discount and issuance costs.For the year ended December 31, 2011, we amortized the remaining portion of debt discount and issuance costs of our 7.5%7.5 percent convertible senior notes upon maturity in April 2011. There was no amortization of debt discount and issuance costs for the corresponding period in 2012.

Foreign exchange gain (loss). Foreign exchange gain for the year ended December 31, 2012 and loss for the year ended December 31, 2011 are due to fluctuations in foreign currency exchange rates, primarily related to payables and receivables in our European branches and subsidiaries denominated in foreign currencies.

Dividends and deemed dividends on preferred stock.Dividends and deemed dividends on preferred stock were approximately $13.9 million for the year ended December 31, 2012 related to the issuances of our Series 15-1, 15-2 and 17 preferred stock. Dividends and deemed dividends on preferred stock were approximately $58.7 million for the year ended December 31, 2011, primarily related to the redemptions of our Series 8 and 10 preferred stock in addition to the issuances of our Series 12, 13 and 14 preferred stock.

Years ended December 31, 2011 and 2010.

License and contract revenue.    License and contract revenue for the year ended December 31, 2010 represents recognition of deferred revenue from the sale of Lisofylline material to DiaKine Therapeutics, Inc.

Research and development expenses.    Our research and development expenses for compounds under development and preclinical development were as follows (in thousands):

   2011   2010 

Compounds under development:

    

PIXUVRI

  $11,266    $7,249  

Opaxio

   1,445     2,608  

Tosedostat

   6,955     —    

Brostallicin

   75     115  

Other compounds

   180     108  

Operating expenses

   14,975     16,297  

Research and preclinical development

   4     654  
  

 

 

   

 

 

 

Total research and development expenses

  $34,900    $27,031  
  

 

 

   

 

 

 

Research and development expenses increased to $34.9 million for the year ended December 31, 2011 from $27.0 million for the year ended December 31, 2010. PIXUVRI costs increased primarily due to an increase in clinical development activity associated with the start-up of the PIX306 study. These increases were partially offset by decreases in the EXTEND and RAPID trials related to their wind-down and by a decrease in regulatory activity primarily associated with consulting services. Costs for our Opaxio program decreased primarily due to a reduction in clinical development activity associated with a decline in patient enrollment in our GOG-0212 trial, in addition to a decrease in manufacturing activity. Costs for tosedostat relate to the upfront payment upon execution of the co-development and license agreement with Chroma, in addition to our share of development costs associated with clinical and manufacturing activity incurred under the agreement. Costs for brostallicin relate primarily to clinical development activities associated with Phase 1 and Phase 2 studies. Our operating expenses decreased primarily due to a reduction in occupancy costs associated with a lease adjustment, in addition to a decrease in share-based compensation expense. These decreases were partially offset by increases in our 2011 estimated discretionary bonus accrual and depreciation expense. Research and preclinical development costs declined primarily due to the completion of contracted bisplatinate process development work, in addition to further decreases in expenses associated with the closure of our Bresso, Italy operations.

Selling, general and administrative expenses.    Selling, general and administrative expenses decreased to $38.3 million for the year ended December 31, 2011 from $51.5 million for the year ended December 31, 2010.

This decrease was primarily related to a $10.4 million reduction in noncash share-based compensation, a $3.5 million provision for VAT assessments for the year ended December 31, 2010, a $1.6 million decrease in compensation and benefits associated with a lower average number of personnel in the year ended December 31, 2011 than the prior year, a $1.2 million decrease in occupancy expense primarily related to a lease adjustment and a decrease in sales and marketing expense associated with the pre-commercial efforts for PIXUVRI during the year ended December 31, 2010. These decreases were offset in part by a net increase of $2.3 million in legal and patent services primarily related to attorney fees and related costs for litigation settlement associated with The Lash Group, Inc. and a $1.9 million increase associated with our 2011 estimated discretionary bonus accrual.

Settlement expense (income).We recorded $11.0 million in settlement income for the year ended December 31, 2011 resulting from our settlement with The Lash Group, Inc.

Investment and other income (expense), net.    Investment and other income for the year ended December 31, 2011 increased to $1.5 million as compared to $1.1 million for the year ended December 31, 2010. The amount for the year ended December 31, 2011 is primarily related to the retirement of our 5.75% Notes in December 2011 resulting from the difference in the carrying amount and the outstanding principal balance at maturity. In the year ended December 31, 2010, we were awarded $1.0 million in grants by the Internal Revenue Service under the Qualifying Therapeutic Discovery Project Credit Program.

Interest expense.    Interest expense decreased to $0.9 million for the year ended December 31, 2011 from $2.2 million for the year ended December 31, 2010. This decrease is primarily due to maturity of our 4% convertible senior subordinated notes in July 2010. In addition, we fully repaid $10.3 million of our 7.5% convertible senior notes in April 2011 and $10.9 million of our 5.75% convertible senior notes in December 2011 upon maturity.

Amortization of debt discount and issuance costs.    Amortization of debt discount and issuance costs decreased to $0.5 million for the year ended December 31, 2011 as compared to $0.8 million for the year ended December 31, 2010. The decrease is primarily due to the maturity of our 4% convertible senior subordinated notes in July 2010 and maturity of our 7.5% convertible senior notes in April 2011.

Foreign exchange gain (loss).    Foreign exchange loss for the years ended December 31, 2011 and 2010 are due to fluctuations in foreign currency exchange rates, primarily related to payables and receivables in our European branches denominated in foreign currencies.

Debt conversion expense.    Debt conversion expense of $2.0 million for the year ended December 31, 2010 is related to the exchange of $1.8 million principal balance of our 4% convertible senior subordinated notes in May 2010 for approximately 0.1 million shares of our common stock.

Dividends and deemed dividends on preferred stock.    Dividends and deemed dividends on preferred stock were approximately $58.7 million for the year ended December 31, 2011 primarily related to the redemptions of our Series 8 and 10 preferred stock in addition to the issuances of our Series 12, 13 and 14 preferred stock. Dividends and deemed dividends on preferred stock were approximately $64.9 million related to the issuances of our Series 3, 4, 5, 6 and 7 preferred stock.

Liquidity and Capital Resources

Cash and cash equivalents. As of December 31, 2012,2013, we had $50.4$71.6 million in cash and cash equivalents.

Net cash used in operating activities.Net cash used in operating activities totaled $35.8 million for the year ended December 31, 2013, compared to $62.8 million for the year ended December 31, 2012 compared toand $60.5 million for the year ended December 31, 2011 and $63.1 million2011. The decrease in net cash used in operating activities for the year ended December 31, 2010.2013 as compared to the year ended December 31, 2012 was primarily due to the $30.0 million upfront payment received in connection with our collaboration agreement with Baxter in 2013, the $5.0 million milestone payment received from Teva upon achievement of a worldwide net sales milestone of TRISENOX in 2013 and cash received from sales of PIXUVRI in 2013. This decrease was primarily offset by an increase in cash paid for inventory, cash paid for commercial activities related to PIXUVRI and cash paid for interest during the year ended December 31, 2013 as compared to December 31, 2012. The increase in net cash used in operating activities for the year ended December 31, 2012, as compared to the year ended December 31, 2011, was in part due to the proceeds

received from our settlement with The Lash Group, Inc. in 2011. This increase was offset by a one-time upfront payment of $5.0 million in March 2011 related to the licensing of tosedostat, which is included in research and development expense, and a decrease in cash paid for interest on our convertible notes. The decrease in net cash used in operating activities for the year ended December 31, 2011 as compared to the year ended December 31, 2010 was also due to the proceeds received from settlement with The Lash Group, Inc. In addition, decreases in cash paid for interest primarily during the year ended December 31, 2011 as compared to the year ended December 31, 2010 and payments related to the closure of our Bresso, Italy operations made in the year ended December 31, 2010 contributed to the overall decrease in cash used in operating activities for the year ended December 31, 2011. These decreases were offset primarily by an increase in research and development expense in the year ended December 31, 2011, which included the upfront payment of $5.0 million related to the licensing of tosedostat. In addition, we made a $1.1 million payment in the year ended December 31, 2011 to the GOG related to the 650 patient enrollment milestone achieved in the year ended December 31, 2010.

Net cash used in investing activities.Net cash used in investing activities totaled $1.5 million, as compared to $20.7 million for the year ended December 31, 2012 as compared toand $2.7 million for the year ended December 31, 2011 and $2.3 million2011. The decrease in net cash used in investing activities for the year ended December 31, 2010.2013 was the result of $17.8 million paid for the acquisition of assets from S*BIO in 2012 and a decrease in purchases of property and equipment in 2013. The increase in net cash used in investing activities for the year ended December 31, 2012 was also the result of $17.8 million paid for the acquisition of assets from S*BIO. Net cash used in investing activities for the years ended December 31, 2011 and 2010 was primarily due to purchases of property and equipment.

Net cash provided by financing activities.Net cash provided by financing activities totaled $59.0 million for the year ended December 31, 2013, as compared to $87.2 million for the year ended December 31, 2012 as compared toand $87.0 million for the year ended December 31, 2011 and $49.7 million2011. Net cash provided by financing activities for the year ended

December 31, 2010. 2013 was primarily due to issuances of preferred stock, long-term debt and warrants. In March 2013, we entered into a Loan and Security Agreement with Hercules Technology Growth Capital, Inc. for a senior secured term loan of up to $15.0 million. The first $10.0 million was funded in March 2013, and we exercised our option to borrow an additional $5.0 million in December 2013. We received $14.9 million in net proceeds from the issuance of our Series 18 preferred stock in September 2013. We also received approximately $30.0 million in net proceeds from the issuance of our Series 19 preferred stock in November 2013.

Net cash provided by financing activities for the year ended December 31, 2012 was primarily related to the issuance of convertible preferred stock and warrants during the period. We received approximately $32.9 million in net proceeds from the issuances of our Series 15 preferred stock and warrants to purchase common stock in May 2012 and July 2012, collectively. In addition, we received approximately $54.7 million in net proceeds from the issuance of our Series 17 preferred stock and warrants to purchase common stock in October 2012. These proceeds were offset by $0.2 million of cash paid in the year ended December 31, 2012 for transaction costs associated with the issuance of Series 14 preferred stock and $0.1 million cash paid for the repurchase of shares in connection with satisfying tax withholding obligations on the vesting of restricted stock awards to employees during the year ended December 31, 2012.

Net cash provided by financing activities for the year ended December 31, 2011 was primarily due to issuances of preferred stock and warrants offset by repayments of outstanding convertible notes during the period. We received approximately $23.2 million in net proceeds from the issuance of our Series 8 preferred stock, warrants to purchase common stock and an additional investment right to purchase shares of our Series 9 preferred stock in January 2011. We also received approximately $23.5 million in net proceeds from the issuance of our Series 10 preferred stock, warrants to purchase common stock and an additional investment right to purchase shares of our Series 11 preferred stock in February 2011. We received approximately $15.0 million in net proceeds from the issuance of our Series 12 preferred stock and warrants to purchase common stock in May 2011. In addition, we received approximately $28.0 million in net proceeds from the issuance of our Series 13 preferred stock and warrants to purchase common stock in July 2011. We received approximately $18.9 million in net proceeds from the issuance of our Series 14 preferred stock and warrants to purchase common stock in December 2011. These proceeds were offset by a $10.3 million payment to retire the outstanding principal balance on our 7.5% convertible senior notes in April 2011, $10.9 million payment to retire the outstanding principal balance on our 5.75% convertible senior notes in December 2011 and $0.4 million cash paid for the repurchase of shares in connection with satisfying tax withholding obligations on the vesting of restricted stock awards to employees during the year ended December 31, 2011.

Net cash provided by financing activities for the year ended December 31, 2010 was primarily due to issuances of convertible preferred stock and warrants during the period offset by repayment of outstanding convertible notes during the period. We received $28.0 million in net proceeds from the issuance of our Series 3

preferred stock and warrants to purchase common stock in January 2010. We received $18.6 million in net proceeds from the issuance of our Series 4 preferred stock and warrants to purchase common stock in April 2010. In addition, we received $19.7 million in net proceeds from the issuance of our Series 5 preferred stock and warrants to purchase common stock in May 2010. We received $3.0 million in net proceeds from the issuance of our Series 6 preferred stock and warrants to purchase common stock in July 2010. Additionally, we received $19.9 million in net proceeds from the issuance of our Series 7 preferred stock and warrants to purchase common stock in October 2010. These proceeds were offset by a $38.5 million payment to retire the outstanding principal balance on our 4% convertible senior subordinated notes upon maturity in July 2010. We also paid $0.9 million for the repurchase of shares in connection with satisfying tax withholding obligations on the vesting of restricted stock awards to employees during 2010.

Capital Resources

Our accompanying consolidated financial statements have been prepared assuming that we will continue as a going concern, which contemplates realization of assets and the satisfaction of liabilities in the normal course of business for the twelve-month period following the date of these consolidated financial statements. In 2007, our ability to satisfy obligations upon maturity of convertible notes raised substantial doubt about our ability to continue as a going concern. Since 2007, these obligations have been satisfied.

Our available cash and cash equivalents were $50.4$71.6 million as of December 31, 2012.2013. At our currently planned spending rate, we believe that our present financial resources, in additiontogether with pacritinib milestone payments projected to be earned and received over the course of 2014 and 2015 under our collaboration with Baxter, and expected receiptsEuropean sales from European PIXUVRI, sales, will be sufficient to fund our operations into the fourththird quarter of 2013.2015. Changes in manufacturing, clinical trial expenses and expansion of our sales and marketing organization in Europe, may consume capital resources earlier than planned. Additionally, we may not receive the country reimbursement rates in Europeanticipated pacritinib milestone payments or sales from PIXUVRI. Due to these and other factors, our forecast for PIXUVRI thatthe period for which we currently assume in planning for 2013 and 2014.will have sufficient resources to fund our business may fail.

Capital Requirements

Our future capital requirements will depend on many factors, including:

 

changes in manufacturing;

results of and other developments with respect to our clinical trials;

potential expansion of our sales and marketing organization in Europe;

 

activities with respect to regulatory approval of our products;approvals;

 

the extent to which we acquire, invest or divest products,products/product candidates, technologies or businesses, or sell or license our productsassets to others;

 

progress in and scope of our research and development activities;

 

ability to find appropriate partners for the development and commercialization of our products if they are approved for marketing;

success in commercializing our products;activities;

 

litigation and other disputes; and

 

competitive market developments.

We expect that we will need to raise additional funds and are currently exploring alternative sources of debt and other non-dilutive capital.to develop our business. We may seek to raise such capital through debt financings, partnerships, collaborations, joint ventures or disposition of assets. Our boardBoard of directorsDirectors may issue shares depending on our financial needs and market opportunities, if deemed to be in the best interest of the shareholders. However, additional funding may not be available on favorable terms or at all. If additional funds are raised by issuing equity securities, substantial dilution to existing shareholders may result. Additional funding may not be available on favorable terms or at all. If we fail to obtain additional capital when needed, we may be required to delay, scale back or eliminate some or all of our research and development programs, as well as reduce our selling, general and administrative expenses.expenses and/or refrain from making our contractually required payments when due, which could harm our business, financial condition, operating results and prospects.

The following table includes information relating to our contractual obligations as of December 31, 20122013 (in thousands):

 

Contractual Obligations

  Payments Due by Period   Payments Due by Period 
  Total   1 Year   2-3 Years   4-5 Years   After 5
Years
   Total   Less than
1 Year
   1-3 Years   3-5 Years   More than
5 Years
 

Operating leases:

                    

Facilities

  $21,861    $2,347    $4,532    $4,462    $10,520    $20,147    $2,534    $4,728    $4,621    $8,264  

Long-term obligations (1)

   31     —       31     —       —    

Long-term debt

   15,000     3,556     11,444     —       —    

Interest on long-term debt (1)

   3,122     1,710     1,412     —       —    

Purchase commitments (2)

   5,118     4,316     556     246     —       1,484     1,381     102     1     —    

Other obligations (3)

   1,412     131     1,281     —       —    
  

 

   

 

   

 

   

 

   

 

   

 

   

 

   

 

   

 

   

 

 
  $27,010    $6,663    $5,119    $4,708    $10,520    $41,165    $9,312    $18,967    $4,622    $8,264  
  

 

   

 

   

 

   

 

   

 

   

 

   

 

   

 

   

 

   

 

 

 

(1)Long-termThe interest rate on our long-term debt floats at a rate per annum equal to 12.25 percent plus the amount by which the prime rate exceeds 3.25 percent. The amounts presented for interest payments in future periods assume a prime rate of 3.25 percent.
(2)Purchase commitments include obligations related to manufacturing supply, insurance and other purchase commitments.
(3)Other obligations do not include $5.0$4.8 million deferred rent associated with our operating lease for office space.
(2)Purchase commitments include manufacturing supply commitments under the NerPharMa Agreement. See Item 1,Businessfor additional information regarding the NerPharMa Agreement.

Some of our licensing agreements obligate us to pay a royalty on net sales of licensed products. Such royalties are dependent on future product sales and are not provided for in the table above as they are not estimable. See Part I, Item 1, “Business—License Agreements and Additional Milestone Activities” for additional information.

Additional Milestone Activities

In connection with our development and commercialization activities, we have entered into a number of agreements pursuant to which we agreehave agreed to make milestone payments upon certain development, sales-based and other milestone events; assume certain development and other expenses; and pay designated royalties

on sales, including the Novartis Agreement, the UVM Agreement, the S*BIO Agreement, the Chroma License Agreement, the PG-TXL Agreement, the GOG Agreement, the Nerviano Agreement, the Termination Agreement with Novartis and our acquisition agreement with Cephalon. These agreements are discussed in more detail in “Item 1. Business—Part I, Item 1, “Business—License Agreements and Additional Milestone Activities.” Under the Novartis Agreement, Novartis also has an option to develop and commercialize PIXUVRI based on agreed terms. If Novartis exercises its option on PIXUVRI under certain conditions and we are able to negotiate and sign a definitive license agreement with Novartis, Novartis would be required to pay us a $7.5 million license fee, up to $104 million in registration and sales related milestones and a royalty on PIXUVRI worldwide net sales if the option is exercised. Royalty payments to us for PIXUVRI are based on worldwide PIXUVRI net sales volumes and range from the low-double digits to the low-thirties as a percentage of net sales. As we have commenced commercial sales of PIXUVRI, we expect to pay low- or mid-single digit royalties on PIXUVRI net sales pursuant to the UVM Agreement. The UVM Agreement is discussed in more detail in “ItemPart I, Item 1, Business—“Business—License Agreements and Additional Milestone Activities.”

Impact of Inflation

In the opinion of management, inflation has not had a material effect on our operations including selling prices, capital expenditures and operating expenses.

Critical Accounting Estimates

Management makes certain judgments and uses certain estimates and assumptions when applying accounting principles generally accepted in the United StatesU.S. in the preparation of our consolidated financial statements. We evaluate our estimates and judgments on an on-going basis and base our estimates on historical experience and on assumptions that we believe to be reasonable under the circumstances. Our experience and assumptions form the basis for our judgments about the carrying value of assets and liabilities that are not readily apparent from other sources. Actual results may vary from what we anticipate and different assumptions or estimates about the future could change our reported results. We believe the following accounting policiesestimates are the most critical to us, in that they are important to the portrayal of our consolidated financial statements and require our subjective or complex judgment in the preparation of our consolidated financial statements.

Impairment of Long-lived Assets

We review our long-lived assets for impairment whenever events or changes in business circumstances indicate that the carrying amount of assets may not be fully recoverable or that the useful lives of these assets are no longer appropriate. Each impairment test is based on a comparison of the undiscounted future cash flows to the recorded value of the asset. If an impairment is indicated, the asset is written down to its estimated fair value based on quoted fair market values.

Contingencies

We are currently involved in various claims and legal proceedings. On a quarterly basis, we review the status of each significant matter and assess its potential financial exposure. If the potential loss from any claim, asserted or unasserted, or legal proceeding is considered probable and the amount can be reasonably estimated, we accrue a liability for the estimated loss. Significant judgment is required in both the determination of probability and the determination as to whether an exposure is reasonably estimable. Because of uncertainties related to these matters, accruals are based only on the best information available at the time. As additional information becomes available, we reassess the potential liability related to pending claims and litigation and may revise our estimates. These revisions in the estimates of the potential liabilities could have a material impact on our consolidated results of operations and financial position.

Revenue Recognition

Our license and collaboration agreements may contain multiple elements as evaluated under ASC 605-25,Revenue RecognitionMultiple-Element Arrangements, including grants of licenses to know-how and patents relating to our product candidates as well as agreements to provide research and development services, regulatory services, manufacturing and commercialization services. Each deliverable under the agreement is evaluated to determine whether it qualifies as a separate unit of accounting based on whether the deliverable has standalone value to the customer. The arrangement’s consideration that is fixed or determinable is then allocated to each separate unit of accounting based on the relative selling price of each deliverable. This evaluation requires

subjective determinations and requires us to make judgments about the selling price of the individual elements and whether such elements are separable from the other aspects of the contractual relationship. Upfront payments for licenses are evaluated to determine if the licensee can obtain standalone value from the license separate from the value of the research and development services and other deliverables in the arrangement to be provided by us. The assessment of multiple element arrangements also requires judgment in order to determine the allocation of revenue to each deliverable and the appropriate point in time, or period of time, that revenue should be recognized. If we determine that the license does not have standalone value separate from the research and development services, the license and the services are combined as one unit of accounting and upfront payments are recorded as deferred revenue in the balance sheet and are recognized as revenue over the estimated performance period that is consistent with the term of performance obligations contained in the collaboration agreement. When standalone value is identified, the related consideration is recorded as revenue in the period in which the license or other intellectual property is delivered.

Our license and collaboration agreements may also contain milestone payments that become due to us upon achievements of certain milestones. Under the milestone method, we recognize revenue that is contingent upon the achievement of a substantive milestone in its entirety in the period in which the milestone is achieved. A milestone is an event (i) that can be achieved in whole or in part on either our performance or on the occurrence of a specific outcome resulting from our performance, (ii) for which there is substantive uncertainty at the date the arrangement is entered into that the event will be achieved and (iii) that would result in additional payments being due to us. A milestone payment is considered substantive when the consideration payable to us for each milestone (a) is consistent with our performance necessary to achieve the milestone or the increase in value to the collaboration resulting from our performance, (b) relates solely to our past performance and (c) is reasonable relative to all of the other deliverables and payments within the arrangement. In making this assessment, we consider all facts and circumstances relevant to the arrangement, including factors such as the scientific, regulatory, commercial and other risks that must be overcome to achieve the respective milestone, the level of effort and investment required to achieve the respective milestone and whether any portion of the milestone consideration is related to future performance or deliverables.

Government-mandated discounts and rebates

Our estimate for government-mandated discounts and rebates is based on actual discounts and rebates healthcare providers and distributors have claimed for reduced pricing as well as statutorily-defined discount rates.

Product returns and other deductions

We offer certain distributors a limited right of return or replacement on product that is damaged in certain instances. Product returned is not resalable given the nature of our product and method of administration. We have developed estimates for product returns based upon historical industry information regarding product return rates for other specialty pharmaceutical products, inventory levels in the distribution channel and other relevant factors. To date, there have been no PIXUVRI product returns. We monitor inventory levels in the distribution channel, as well as sales of PIXUVRI by certain distributors to healthcare providers, using product-specific data provided by those distributors. If necessary, our estimates of product returns or replacements may be adjusted in the future.

For other deductions, we have written contracts with certain distributors that include terms for distribution-related discounts. We record distribution discounts based on the number of units sold to those distributors.

Share-based Compensation Expense

Share-based compensation expense for all share-based payment awards made to employees and directors is recognized and measured based on estimated fair values. For option valuations, we have elected to utilize the Black-Scholes valuation method in order to estimate the fair value of options on the date of grant. The risk-free

interest rate is based on the implied yield currently available for U.S. Treasury securities at maturity with an equivalent term. We have not declared or paid any dividends on our common stock and do not currently expect to do so in the future. The expected term of options represents the period that our share-based awards are expected to be outstanding and was determined based on historical weighted average holding periods and projected holding periods for the remaining unexercised options. Consideration was given to the contractual terms of our share-based awards, vesting schedules and expectations of future employee behavior. Expected volatility is based on the annualized daily historical volatility, including consideration of the implied volatility and market prices of traded options for comparable entities within our industry. These assumptions underlying the Black-Scholes valuation model involve management’s best estimates.

For more complex awards, such as our 2012-2014long term performance awards, or the Long-Term Performance Awards, discussed in Note 15 of the Notes to Consolidated Financial Statements contained herein, we employ a Monte Carlo simulation model to calculate estimated grant-date fair value. For the 2012-2014 performance awards,Long-Term Performance Awards, the average present value is calculated based upon the expected date the award will vest, or the event date, the expected stock price on the event date and the expected current shares outstanding on the event date. The event date, stock price and the shares outstanding are estimated using the Monte Carlo simulation model, which is based on assumptions by management, including the likelihood of achieving milestones and potential future financings. These assumptions impact the fair value of the equity-based award and the expense that will be recognized over the life of the award.

Generally accepted accounting principles for share-based compensation also require that we recognize compensation expense for only the portion of awards expected to vest. Therefore, we apply an estimated forfeiture rate that we derive from historical employee termination behavior. If the actual number of forfeitures differs from our estimates, adjustments to compensation expense may be required in future periods. For performance-based awards that do not include market-based conditions, we record share-based compensation expense only when the performance-based milestone is deemed probable of achievement. We utilize both quantitative and qualitative criteria to judge whether milestones are probable of achievement. For awards with market-based performance conditions, we recognize the grant-date fair value of the award over the derived service period regardless of whether the underlying performance condition is met.

Recently Adopted Accounting Standards

In December 2010, the Financial Accounting Standards Board, or FASB, issued additional guidance on when to perform Step 2 of the goodwill impairment test for reporting units with zero or negative carrying amounts. The criteria for evaluating Step 1 of the goodwill impairment test and proceeding to Step 2 were amended for reporting units with zero or negative carrying amounts and require performing Step 2 if qualitative factors indicate that it is more likely than not that a goodwill impairment exists. For public entities, this guidance was effective for fiscal years, and interim periods within those years, beginning after December 15, 2010. Upon adoption of this guidance on January 1, 2011, we performed Step 2 of the goodwill impairment test. Based on a valuation using the income, market and cost approaches, we determined that all of our $17.1 million in goodwill was impaired. The related charge was recorded as a cumulative-effect adjustment to beginning retained earnings on January 1, 2011. See Note 3,4,Goodwill,for additional information.

In June 2011, the FASB issued guidance amending the presentation requirements for comprehensive income. For public entities, this guidance was effective for fiscal years, and interim periods within those years, beginning after December 15, 2011 with early adoption permitted. Subsequently, in December 2011, the FASB deferred the effective date of the portion of the June 2011 accounting standards update requiring separate presentation of reclassifications out of accumulated other comprehensive income as discussed below. Upon adoption on January 1, 2012, we had the option to report total comprehensive income, including components of net income and components of other comprehensive income, as a single continuous statement or in two separate but consecutive statements. We elected to present comprehensive income in two separate but consecutive statements as part of the accompanying consolidated financial statements.

Recently Issued Accounting Standards

In February 2013, the FASB issued guidance requiring presentation of amounts reclassified from each component of accumulated other comprehensive income. DisclosureIn addition, disclosure is required of the effects of significant reclassifications on income statement line items either on the face of the statement where net income is presented or as a separate disclosure in the notes to the financial statements. For public entities, this guidance iswas effective prospectively for reporting periods beginning after December 15, 2012. The adoption of this guidance did not have a material impact on our consolidated financial statements.

Recently Issued Accounting Standards

In March 2013, the FASB issued guidance to clarify when to release cumulative foreign currency translation adjustments when an entity ceases to have a controlling financial interest in a subsidiary or group of assets within a foreign entity. The amendment is effective prospectively for fiscal years, and interim periods within those years, beginning after December 15, 2013 and should be applied prospectively to derecognition events occurring after the effective date. Early adoption is permitted. We do not expect the adoption of this guidance willto have a material impact on our consolidated financial statements.

In July 2013, the FASB issued guidance on the presentation of an unrecognized tax benefit when a net operating loss carryforward, similar tax loss or tax carryforward exists. FASB concluded that an unrecognized tax benefit should be presented as a reduction of a deferred tax asset except in certain circumstances where the unrecognized tax benefit should be presented as a liability and should not be combined with deferred tax assets. The amendment is effective prospectively for fiscal years, and interim periods within those years, beginning after December 15, 2013, with early adoption permitted. We are currently evaluating the impact this amendment may have on our consolidated financial statements.

 

Item 7a.Quantitative and Qualitative Disclosures about Market Risk

Foreign Exchange Market Risk

We are exposed to risks associated with the translation of euro-denominated financial results and accounts into U.S. dollars for financial reporting purposes. The carrying value of the assets and liabilities held in our European branches and subsidiaries will be affected by fluctuations in the value of the U.S. dollar as compared to the euro. Changes in the value of the U.S. dollar as compared to the euro might have an adverse effect on our reported results of operations and financial condition. As the net positions of our unhedged foreign currency transactions fluctuate, our earnings might be negatively affected. As of December 31, 2012, our foreign currency transactions were minimal and changes to the exchange rate between the U.S. dollar and foreign currencies would have an immaterial affect on our earnings. In addition, the reported carrying value of our euro-denominatedeuro denominated assets and liabilities held in our European branches and subsidiaries will be affected by fluctuations in the value of the U.S. dollar as compared to the euro. As of December 31, 2012,2013, we had a net asset balance, excluding intercompany payables and receivables, in our European branches and subsidiaries denominated in euros. If the euro were to weaken 20%20 percent against the dollar, our net asset balance would decrease by approximately $2.0$2.3 million as of this date.

Interest Rate Risk

In March 2013, we entered into our senior secured term loan, which had an outstanding balance of $15.0 million as of December 31, 2013. The senior secured term loan bears interest at variable rates. Based on the outstanding amount under such loan at December 31, 2013 of $15.0 million, and assuming such amount had been outstanding as of January 1, 2013, a one percent increase in interest rates would result in additional annualized interest expense of $0.1 million. For a detailed discussion of our senior secured term loan, including a discussion of the applicable interest rate, please refer to Note 10,Long-term Debt, under Item 8 of Part II in this Annual Report on Form 10-K.

Item 8.Financial Statements and Supplementary Data

INDEX TO CONSOLIDATED FINANCIAL STATEMENTS

 

   Page

Reports of Marcum LLP, Independent Registered Public Accounting Firm

  62

Consolidated Balance Sheets

  64

Consolidated Statements of Operations

  65

Consolidated Statements of Comprehensive Loss

  66

Consolidated Statements of Shareholders’ Equity (Deficit)

  67

Consolidated Statements of Cash Flows

  7069

Notes to Consolidated Financial Statements

  7271

REPORT OF INDEPENDENT REGISTERED PUBLIC ACCOUNTING FIRM

To the Audit Committee of the

Board of Directors and Shareholders of

Cell Therapeutics, Inc.

We have audited the accompanying consolidated balance sheets of Cell Therapeutics, Inc. (the “Company”) as of December 31, 20122013 and 2011,2012, and the related consolidated statements of operations, comprehensive loss, shareholders’ equity (deficit), and cash flows for the years ended December 31, 2013, 2012 2011 and 2010.2011. These consolidated financial statements are the responsibility of the Company’s management. Our responsibility is to express an opinion on these consolidated financial statements based on our audits.

We conducted our audits in accordance with the standards of the Public Company Accounting Oversight Board (United States). Those standards require that we plan and perform the audit to obtain reasonable assurance about whether the consolidated financial statements are free of material misstatement. An audit also includes examining, on a test basis, evidence supporting the amounts and disclosures in the financial statements, assessing the accounting principles used and significant estimates made by management, as well as evaluating the overall financial statement presentation. We believe that our audits provide a reasonable basis for our opinion.

In our opinion, the consolidated financial statements referred to above present fairly, in all material respects, the consolidated financial position of Cell Therapeutics, Inc. as of December 31, 20122013 and 20112012, and the consolidated results of its operations and its cash flows for the years ended December 31, 2013, 2012 2011 and 20102011 in conformity with accounting principles generally accepted in the United States of America.

We have also audited, in accordance with the standards of the Public Company Accounting Oversight Board (United States), Cell Therapeutics,Therapeutic, Inc.’s internal control over financial reporting as of December 31, 2012,2013, based on the criteria established in Internal Control-Integrated Framework issued by the Committee of Sponsoring Organizations of the Treadway Commission in 1992 and our report dated February 28, 2013March 4, 2014 expressed an unqualified opinion on the effectiveness of the Company’s internal control over financial reporting.

/s/ MarcumLLP

San Francisco, CA

February 28, 2013March 4, 2014

REPORT OF INDEPENDENT REGISTERED PUBLIC ACCOUNTING FIRM ON INTERNAL

INTERNAL CONTROL OVER FINANCIAL REPORTING

To the Audit Committee of the

Board of Directors and Shareholders of

Cell Therapeutics, Inc.

We have audited Cell Therapeutics,Therapeutic, Inc.’s (the “Company”) internal control over financial reporting as of December 31, 2012,2013, based on criteria established in Internal Control-Integrated Framework issued by the Committee of Sponsoring Organizations of the Treadway Commission.Commission in 1992. The Company’s management is responsible for maintaining effective internal control over financial reporting, and for its assessment of the effectiveness of internal control over financial reporting, included in the accompanying “Management Annual Report on Internal Control over Financial Reporting”. Our responsibility is to express an opinion on the Company’s internal control over financial reporting based on our audit.

We conducted our audit in accordance with the standards of the Public Company Accounting Oversight Board (United States). Those standards require that we plan and perform the audit to obtain reasonable assurance about whether effective internal control over financial reporting was maintained in all material respects. Our audit of internal control over financial reporting included obtaining an understanding of internal control over financial reporting, assessing the risk that a material weakness exists, and testing and evaluating the design and operating effectiveness of internal control based on the assessed risk. Our audit also included performing such other procedures as we considered necessary in the circumstances. We believe that our audit provides a reasonable basis for our opinion.

A company’s internal control over financial reporting is a process designed to provide reasonable assurance regarding the reliability of financial reporting and the preparation of financial statements for external purposes in accordance with generally accepted accounting principles. A company’s internal control over financial reporting includes those policies and procedures that (1) pertain to the maintenance of records that, in reasonable detail, accurately and fairly reflect the transactions and dispositions of the assets of the company; (2) provide reasonable assurance that transactions are recorded as necessary to permit preparation of financial statements in accordance with generally accepted accounting principles, and that receipts and expenditures of the company are being made only in accordance with authorizations of management and directors of the company; and (3) provide reasonable assurance regarding prevention or timely detection of unauthorized acquisition, use, or disposition of the company’s assets that could have a material effect on the financial statements.

Because of the inherent limitations, internal control over financial reporting may not prevent or detect misstatements. Also, projections of any evaluation of effectiveness to future periods are subject to the risk that controls may become inadequate because of changes in conditions, or that degree of compliance with the policies or procedures may deteriorate.

In our opinion, Cell Therapeutics, Inc. maintained, in all material aspects, effective internal control over financial reporting as of December 31, 20122013, based on criteria established in Internal Control – Integrated Framework issued by the Committee of Sponsoring Organizations of the Treadway Commission.Commission in 1992.

We have also audited, in accordance with the standards of the Public Company Accounting Oversight Board (United States), the consolidated balance sheets as of December 31, 20122013 and 20112012 and the related consolidated statements of operations, comprehensive loss,income, shareholders’ equity, (deficit), and cash flows for the years ended December 31, 2013, 2012 and 2011 and 2010 of Cell Therapeutics, Inc.the Company and our report dated February 28, 2013expressedMarch 4, 2014 expressed an unqualified opinion on those financial statements.

/s/ MarcumLLP

San Francisco, CA

February 28, 2013March 4, 2014

CELL THERAPEUTICS, INC.

CONSOLIDATED BALANCE SHEETS

(In thousands, except share amounts)

 

  December 31,
2012
 December 31,
2011
   December 31,
2013
 December 31,
2012
 

ASSETS

      

Current assets:

      

Cash and cash equivalents

  $50,436   $47,052    $71,639   $50,436  

Accounts receivable

   235    —    

Inventory

   5,074    1,626  

Prepaid expenses and other current assets

   9,875    4,023     3,567    8,249  
  

 

  

 

   

 

  

 

 

Total current assets

   60,311    51,075     80,515    60,311  

Property and equipment, net

   6,785    3,604     5,478    6,785  

Other assets

   6,617    7,560     7,730    6,617  
  

 

  

 

   

 

  

 

 

Total assets

  $73,713   $62,239    $93,723   $73,713  
  

 

  

 

   

 

  

 

 

LIABILITIES AND SHAREHOLDERS’ EQUITY

      

Current liabilities:

      

Accounts payable

  $12,065   $5,750    $5,051   $12,065  

Accrued expenses

   10,209    11,064     9,469    10,209  

Current portion of long-term obligations

   393    970  

Warrant liability

   991    —    

Current portion of deferred revenue

   1,010    —    

Current portion of long-term debt

   3,155    —    

Other current liabilities

   393    393  
  

 

  

 

   

 

  

 

 

Total current liabilities

   22,667    17,784     20,069    22,667  

Long-term obligations, less current portion

   4,641    2,985  

Deferred revenue, less current portion

   1,626    —    

Long-term debt, less current portion

   10,152    —    

Other liabilities

   5,657    4,641  
  

 

  

 

   

 

  

 

 

Total liabilities

   27,308    20,769     37,504    27,308  

Commitments and contingencies

      

Common stock purchase warrants

   13,461    13,461     13,461    13,461  

Shareholders’ equity:

      

Preferred stock, no par value:

   

Authorized shares—333,333

   

Series 14 Preferred Stock, $1,000 stated value, 20,000 shares designated, 0 and 10,000 shares issued and outstanding at December 31, 2012 and 2011, respectively

   —       6,736  

Common stock, no par value:

      

Authorized shares—150,000,000 and 76,666,666 at December 31, 2012 and 2011, respectively

   

Issued and outstanding shares—109,823,748 and 40,613,545 at December 31, 2012 and 2011, respectively

   1,872,885    1,744,801  

Authorized shares—215,000,000 and 150,000,000 at December 31, 2013 and 2012, respectively

   

Issued and outstanding shares—145,508,767 and 109,823,748 at December 31, 2013 and 2012, respectively

   1,933,305    1,872,885  

Accumulated other comprehensive loss

   (8,273  (8,035   (8,429  (8,273

Accumulated deficit

   (1,830,060  (1,714,785   (1,879,703  (1,830,060
  

 

  

 

   

 

  

 

 

Total CTI shareholders’ equity

   34,552    28,717     45,173    34,552  

Noncontrolling interest

   (1,608  (708   (2,415  (1,608
  

 

  

 

   

 

  

 

 

Total shareholders’ equity

   32,944    28,009     42,758    32,944  
  

 

  

 

   

 

  

 

 

Total liabilities and shareholders’ equity

  $73,713   $62,239    $93,723   $73,713  
  

 

  

 

   

 

  

 

 

See accompanying notes.

CELL THERAPEUTICS, INC.

CONSOLIDATED STATEMENTS OF OPERATIONS

(In thousands, except per share amounts)

 

  Year Ended December 31,   Year Ended December 31, 
  2012 2011 2010   2013 2012 2011 

Revenues:

        

Product sales, net

  $2,314   $—     $—    

License and contract revenue

  $—      $—      $319     32,364    —      —    
  

 

  

 

  

 

   

 

  

 

  

 

 

Total revenues

   —       —       319     34,678    —      —    
  

 

  

 

  

 

   

 

  

 

  

 

 

Operating expenses, net:

    

Operating costs and expenses, net:

    

Cost of product sold

   137    —      —    

Research and development

   33,201    34,900    27,031     33,624    33,201    34,900  

Selling, general and administrative

   38,244    38,290    51,546     42,288    38,244    38,290  

Acquired in-process research and development

   29,108    —       —        —      29,108    —    

Settlement expense (income)

   944    (11,000  145     155    944    (11,000
  

 

  

 

  

 

   

 

  

 

  

 

 

Total operating expenses, net

   101,497    62,190    78,722  

Total operating costs and expenses, net

   76,204    101,497    62,190  
  

 

  

 

  

 

   

 

  

 

  

 

 

Loss from operations

   (101,497  (62,190  (78,403   (41,526  (101,497  (62,190

Other income (expense):

        

Investment and other income (expense), net

   (478  1,545    1,095     (546  (478  1,545  

Interest expense

   (56  (870  (2,208   (1,026  (56  (870

Amortization of debt discount and issuance costs

   —       (546  (768   (513  —      (546

Foreign exchange gain (loss)

   344    (558  (521   61    344    (558

Debt conversion expense

   —       —       (2,031
  

 

  

 

  

 

   

 

  

 

  

 

 

Total other expense, net

   (190  (429  (4,433   (2,024  (190  (429
  

 

  

 

  

 

   

 

  

 

  

 

 

Net loss before noncontrolling interest

   (101,687  (62,619  (82,836   (43,550  (101,687  (62,619

Noncontrolling interest

   313    259    194     807    313    259  
  

 

  

 

  

 

   

 

  

 

  

 

 

Net loss attributable to CTI

   (101,374  (62,360  (82,642   (42,743  (101,374  (62,360

Dividends and deemed dividends on preferred stock

   (13,901  (58,718  (64,918   (6,900  (13,901  (58,718
  

 

  

 

  

 

   

 

  

 

  

 

 

Net loss attributable to common shareholders

  $(115,275 $(121,078 $(147,560  $(49,643 $(115,275 $(121,078
  

 

  

 

  

 

   

 

  

 

  

 

 

Basic and diluted net loss per common share

  $(1.98 $(3.53 $(6.47  $(0.43 $(1.98 $(3.53
  

 

  

 

  

 

   

 

  

 

  

 

 

Shares used in calculation of basic and diluted net loss per common share

   58,125    34,294    22,821     114,195    58,125    34,294  
  

 

  

 

  

 

   

 

  

 

  

 

 

See accompanying notes.

CELL THERAPEUTICS, INC.

CONSOLIDATED STATEMENTS OF COMPREHENSIVE LOSS

(In thousands)

 

  Year Ended December 31,   Year Ended December 31, 
  2012 2011 2010   2013 2012 2011 

Net loss before noncontrolling interest

  $(101,687 $(62,619 $(82,836  $(43,550 $(101,687 $(62,619
  

 

  

 

  

 

   

 

  

 

  

 

 

Other comprehensive income (loss):

        

Foreign currency translation adjustments

   (168 ��241    301     31    (168  241  

Net unrealized gain (loss) on securities available-for-sale

   (70  (307  142  

Net unrealized loss on securities available-for-sale

   (187  (70  (307
  

 

  

 

  

 

   

 

  

 

  

 

 

Other comprehensive income (loss)

   (238  (66  443  

Other comprehensive loss

   (156  (238  (66
  

 

  

 

  

 

   

 

  

 

  

 

 

Comprehensive loss

   (101,925  (62,685  (82,393   (43,706  (101,925  (62,685

Comprehensive loss attributable to noncontrolling interest

   313    259    194     807    313    259  
  

 

  

 

  

 

   

 

  

 

  

 

 

Comprehensive loss attributable to CTI

  $(101,612 $(62,426 $(82,199  $(42,899 $(101,612 $(62,426
  

 

  

 

  

 

   

 

  

 

  

 

 

See accompanying notes.

CELL THERAPEUTICS, INC.

CONSOLIDATED STATEMENTS OF SHAREHOLDERS’ EQUITY (DEFICIT)

(In thousands)

 

  Preferred Stock  Common Stock  Accumulated
Deficit
  Accumulated
Other
Comprehensive
Income (Loss)
  Noncontrolling
Interest
  Total
Shareholders’
Equity
(Deficit)
 
  Shares  Amount  Shares  Amount     

Balance at December 31, 2009

  —     $—      19,676   $1,418,931   $(1,429,083 $(8,412 $(205 $(18,769

Issuance of Series 3 preferred stock, net of transaction costs

  30    27,761    —      —      —      —      —      27,761  

Conversion of Series 3 preferred stock to common stock

  (30  (27,761  823    27,761    —      —      —      —    

Issuance of Series 4 preferred stock, net of transaction costs

  20    18,621    —      —      —      —      —      18,621  

Conversion of Series 4 preferred stock to common stock

  (20  (18,621  1,333    18,621    —      —      —      —    

Issuance of Series 5 preferred stock, net of transaction costs

  21    19,464    —      —      —      —      —      19,464  

Conversion of Series 5 preferred stock to common stock

  (21  (19,464  1,750    19,464    —      —      —      —    

Issuance of Series 6 preferred stock, net of transaction costs

  4    2,970    —      —      —      —      —      2,970  

Conversion of Series 6 preferred stock to common stock

  (4  (2,970  387    2,970    —      —      —      —    

Issuance of Series 7 preferred stock, net of transaction costs

  21    19,273    —      —      —      —      —      19,273  

Conversion of Series 7 preferred stock to common stock

  (21  (19,273  1,892    19,273    —      —      —      —    

Value of beneficial conversion features related to preferred stock

  —      —      —      39,923    —      —      —      39,923  

Issuance of warrants in connection with preferred stock issuances

  —      —      —      12,741    —      —      —      12,741  

Issuance of common stock in exchange for convertible notes

  —      —      143    3,879    —      —      —      3,879  

Exercise or exchange of common stock purchase warrants

  —      —      17    177    —      —      —      177  

Equity-based compensation

  —      —      1,155    17,048    —      —      —      17,048  

Other

  —      —      (51  (922  —      —      —      (922

Noncontrolling interest

  —      —      —      —      —      —      (194  (194

Dividends and deemed dividends on preferred stock

  —      —      —      —      (64,918  —      —      (64,918

Net loss for the year ended December 31, 2010

  —      —      —      —      (82,642  —      —      (82,642

Other comprehensive income

  —      —      —      —      —      443    —      443  
 

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

 

Balance at December 31, 2010

  —     $—      27,125   $1,579,866   $(1,576,643 $(7,969 $(399 $(5,145
 

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

 
  Preferred Stock  Common Stock  Accumulated
Deficit
  Accumulated
Other

Comprehensive
Income (Loss)
     Total
Shareholders’
Equity
(Deficit)
 
  Shares  Amount  Shares  Amount    Noncontrolling
Interest
  

Balance at December 31, 2010

  —     $—      27,125   $1,579,866   $(1,576,643 $(7,969 $(399 $(5,145

Cumulative effect adjustment

  —      —      —      —      (17,064  —      —      (17,064

Issuance of Series 8 preferred stock, net of transaction costs

  25    18,337    —      —      —      —      —      18,337  

Redemption of Series 8 preferred stock

  (25  (18,337  —      —      —      —      —      (18,337

Issuance of Series 9 preferred stock

  25    25,000    —      —      —      —      —      25,000  

Conversion of Series 9 preferred stock to common stock

  (25  (25,000  2,149    25,000    —      —      —      —    

Issuance of Series 10 preferred stock, net of transaction costs

  25    18,301    —      —      —      —      —      18,301  

Redemption of Series 10 preferred stock

  (25  (18,301  —      —      —      —      —      (18,301

Issuance of Series 11 preferred stock

  25    24,957    —      —      —      —      —      24,957  

Conversion of Series 11 preferred stock to common stock

  (25  (24,957  2,469    24,957    —      —      —      —    

Issuance of Series 12 preferred stock, net of transaction costs

  16    10,647    —      —      —      —      —      10,647  

Conversion of Series 12 preferred stock to common stock

  (16  (10,647  1,521    10,647    —      —      —      —    

Issuance of Series 13 preferred stock, net of transaction costs

  30    19,077    —      —      —      —      —      19,077  

Conversion of Series 13 preferred stock to common stock

  (30  (19,077  3,529    19,077    —      —      —      —    

Issuance of Series 14 preferred stock, net of transaction costs

  20    13,472    —      —      —      —      —      13,472  

Conversion of Series 14 preferred stock to common stock

  (10  (6,736  1,739    6,736    —      —      —      —    

Value of beneficial conversion features related to preferred stock

  —      —      —      27,435    —      —      —      27,435  

Issuance of additional investment rights in connection with preferred stock issuances

  —      —      —      7,742    —      —      —      7,742  

Issuance of warrants in connection with preferred stock issuances

  —      —      —      21,198    —      —      —      21,198  

Exercise or exchange of common stock purchase warrants

  —      —      1,616    17,485    —      —      —      17,485  

Equity-based compensation

  —      —      509    5,017    —      —      —      5,017  

Noncontrolling interest

  —      —      —      50    —      —      (309  (259

Other

  —      —      (43  (409  —      —      —      (409

Dividends and deemed dividends on preferred stock

  —      —      —      —      (58,718  —      —      (58,718

Net loss for the year ended December 31, 2011

  —      —      —      —      (62,360  —      —      (62,360

Other comprehensive loss

  —      —      —      —      —      (66  —      (66
 

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

 

Balance at December 31, 2011

  10   $6,736    40,614   $1,744,801   $(1,714,785 $(8,035 $(708 $28,009  
 

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

 

 

See accompanying notes.

CELL THERAPEUTICS, INC.

CONSOLIDATED STATEMENTS OF SHAREHOLDERS’ EQUITY (DEFICIT)—(Continued)

(In thousands)

 

  Preferred Stock  Common Stock  Accumulated
Deficit
  Accumulated
Other
Comprehensive
Income (Loss)
  Noncontrolling
Interest
  Total
Shareholders’
Equity
(Deficit)
 
  Shares  Amount  Shares  Amount     

Cumulative effect adjustment

  —      —      —      —      (17,064  —      —      (17,064

Issuance of Series 8 preferred stock, net of transaction costs

  25    18,337    —      —      —      —      —      18,337  

Redemption of Series 8 preferred stock

  (25  (18,337  —      —      —      —      —      (18,337

Issuance of Series 9 preferred stock

  25    25,000    —      —      —      —      —      25,000  

Conversion of Series 9 preferred stock to common stock

  (25  (25,000  2,149    25,000    —      —      —      —    

Issuance of Series 10 preferred stock, net of transaction costs

  25    18,301    —      —      —      —      —      18,301  

Redemption of Series 10 preferred stock

  (25  (18,301  —      —      —      —      —      (18,301

Issuance of Series 11 preferred stock

  25    24,957    —      —      —      —      —      24,957  

Conversion of Series 11 preferred stock to common stock

  (25  (24,957  2,469    24,957    —      —      —      —    

Issuance of Series 12 preferred stock, net of transaction costs

  16    10,647    —      —      —      —      —      10,647  

Conversion of Series 12 preferred stock to common stock

  (16  (10,647  1,521    10,647    —      —      —      —    

Issuance of Series 13 preferred stock, net of transaction costs

  30    19,077    —      —      —      —      —      19,077  

Conversion of Series 13 preferred stock to common stock

  (30  (19,077  3,529    19,077    —      —      —      —    

Issuance of Series 14 preferred stock, net of transaction costs

  20    13,472    —      —      —      —      —      13,472  

Conversion of Series 14 preferred stock to common stock

  (10  (6,736  1,739    6,736    —      —      —      —    

Value of beneficial conversion features related to preferred stock

  —      —      —      27,435    —      —      —      27,435  

Issuance of additional investment rights in connection with preferred stock issuances

  —      —      —      7,742    —      —      —      7,742  

Issuance of warrants in connection with preferred stock issuances

  —      —      —      21,198    —      —      —      21,198  

Exercise or exchange of common stock purchase warrants

  —      —      1,616    17,485    —      —      —      17,485  

Equity-based compensation

  —      —      509    5,017    —      —      —      5,017  

Noncontrolling interest

  —      —      —      50    —      —      (309  (259

Other

  —      —      (43  (409  —      —      —      (409

Dividends and deemed dividends on preferred stock

  —      —      —      —      (58,718  —      —      (58,718

Net loss for the year ended December 31, 2011

  —      —      —      —      (62,360  —      —      (62,360

Other comprehensive loss

  —      —      —      —      —      (66  —      (66
 

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

 

Balance at December 31, 2011

  10   $6,736    40,614   $1,744,801   $(1,714,785 $(8,035 $(708 $28,009  
 

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

 
  Preferred Stock  Common Stock  Accumulated
Deficit
  Accumulated
Other

Comprehensive
Income (Loss)
     Total
Shareholders’
Equity
(Deficit)
 
  Shares  Amount  Shares  Amount    Noncontrolling
Interest
  

Conversion of Series 14 preferred stock to common stock

  (10  (6,736  1,739    6,736    —      —      —      —    

Issuance of Series 15 preferred stock, net of transaction costs

  35    15,442    —      —      —      —      —      15,442  

Conversion of Series 15 preferred stock to common stock

  (35  (15,442  9,042    15,442    —      —      —      —    

Issuance of Series 16 preferred stock, net of transaction costs

  15    11,240    —      —      —      —      —      11,240  

Conversion of Series 16 preferred stock to common stock

  (15  (11,240  2,521    11,240    —      —      —      —    

Issuance of Series 17 preferred stock, net of transaction costs

  60    54,538    —      —      —      —      —      54,538  

Conversion of Series 17 preferred stock to common stock

  (60  (54,538  42,857    54,538    —      —      —      —    

Value of beneficial conversion features related to preferred stock

  —      —      —      13,901    —      —      —      13,901  

Exercise or exchange of common stock purchase warrants

  —      —      9,687    17,798    —      —      —      17,798  

Equity-based compensation

  —      —      3,390    7,938    —      —      —      7,938  

Noncontrolling interest

  —      —      —      587    —      —      (900  (313

Other

  —      —      (26  (96  —      —      —      (96

Dividends and deemed dividends on preferred stock

  —      —      —      —      (13,901  —      —      (13,901

Net loss for the year ended December 31, 2012

  —      —      —      —      (101,374  —      —      (101,374

Other comprehensive loss

  —      —      —      —      —      (238  —      (238
 

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

 

Balance at December 31, 2012

  —     $—      109,824   $1,872,885   $(1,830,060 $(8,273 $(1,608 $32,944  
 

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

 

Issuance of Series 18 preferred stock, net of transaction costs

  15    14,859    —      —      —      —      —      14,859  

Conversion of Series 18 preferred stock to common stock

  (15  (14,859  15,000    14,859    —      —      —      —    

Issuance of Series 19 preferred stock, net of transaction costs

  30    29,840    —      —      —      —      —      29,840  

Conversion of Series 19 preferred stock to common stock

  (30  (29,840  15,674    29,840    —      —      —      —    

Value of beneficial conversion features related to preferred stock

  —      —      —      6,900    —      —      —      6,900  

Equity-based compensation

  —      —      5,207    9,066    —      —      —      9,066  

Noncontrolling interest

  —      —      —      —      —      —      (807  (807

Other

  —      —      (196  (245  —      —      —      (245

Dividends and deemed dividends on preferred stock

  —      —      —      —      (6,900  —      —      (6,900

Net loss for the year ended December 31, 2013

  —      —      —      —      (42,743  —      —      (42,743

Other comprehensive loss

  —      —      —      —      —      (156  —      (156
 

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

 

Balance at December 31, 2013

  —      —      145,509   $1,933,305   $(1,879,703 $(8,429 $(2,415 $42,758  
 

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

 

 

See accompanying notes.

CELL THERAPEUTICS, INC.

CONSOLIDATED STATEMENTS OF SHAREHOLDERS’ EQUITY (DEFICIT)—(Continued)

(In thousands)

  Preferred Stock  Common Stock  Accumulated
Deficit
  Accumulated
Other
Comprehensive
Income (Loss)
  Noncontrolling
Interest
  Total
Shareholders’
Equity
(Deficit)
 
  Shares  Amount  Shares  Amount     

Conversion of Series 14 preferred stock to common stock

  (10  (6,736  1,739    6,736    —      —      —      —    

Issuance of Series 15 preferred stock, net of transaction costs

  35    15,442    —      —      —      —      —      15,442  

Conversion of Series 15 preferred stock to common stock

  (35  (15,442  9,042    15,442    —      —      —      —    

Issuance of Series 16 preferred stock, net of transaction costs

  15    11,240    —      —      —      —      —      11,240  

Conversion of Series 16 preferred stock to common stock

  (15  (11,240  2,521    11,240    —      —      —      —    

Issuance of Series 17 preferred stock, net of transaction costs

  60    54,538    —      —      —      —      —      54,538  

Conversion of Series 17 preferred stock to common stock

  (60  (54,538  42,857    54,538    —      —      —      —    

Value of beneficial conversion features related to preferred stock

  —      —      —      13,901    —      —      —      13,901  

Exercise or exchange of common stock purchase warrants

  —      —      9,687    17,798    —      —      —      17,798  

Equity-based compensation

  —      —      3,390    7,938    —      —      —      7,938  

Noncontrolling interest

  —      —      —      587    —      —      (900  (313

Other

  —      —      (26  (96  —      —      —      (96

Dividends and deemed dividends on preferred stock

  —      —      —      —      (13,901  —      —      (13,901

Net loss for the year ended December 31, 2012

  —      —      —      —      (101,374  —      —      (101,374

Other comprehensive loss

  —      —      —      —      —      (238  —      (238
 

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

 

Balance at December 31, 2012

  —     $—      109,824   $1,872,885   $(1,830,060 $(8,273 $(1,608 $32,944  
 

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

  

 

 

 

See accompanying notes.

CELL THERAPEUTICS, INC.

CONSOLIDATED STATEMENTS OF CASH FLOWS

(In thousands)

 

   Year Ended December 31, 
   2012  2011  2010 

Operating activities

    

Net loss

  $(101,687 $(62,619 $(82,836

Adjustments to reconcile net loss to net cash used in operating activities:

    

Acquired in-process research and development

   29,108    —      —    

Depreciation and amortization

   2,346    2,411    1,842  

Equity-based compensation expense

   7,938    5,017    17,048  

Noncash interest expense

   —      546    768  

Debt conversion expense

   —      —      2,031  

Provision for VAT assessments

   (3,402  —      3,503  

Other

   5    (1,958  (450

Changes in operating assets and liabilities:

    

Prepaid expenses and other current assets

   (5,345  567    516  

Other assets

   1,495    (2,452  (381

Accounts payable

   3,123    (310  (1,403

Accrued expenses

   (885  (211  (3,787

Other liabilities

   4,528    (1,449  21  
  

 

 

  

 

 

  

 

 

 

Total adjustments

   38,911    2,161    19,708  
  

 

 

  

 

 

  

 

 

 

Net cash used in operating activities

   (62,776  (60,458  (63,128
  

 

 

  

 

 

  

 

 

 

Investing activities

    

Cash paid for acquisition of assets from S*BIO Pte Ltd.

   (17,764  —      —    

Purchases of securities available-for-sale

   —      —      (350

Purchases of property and equipment

   (2,937  (2,703  (2,011

Proceeds from sales of property and equipment

   —      31    85  
  

 

 

  

 

 

  

 

 

 

Net cash used in investing activities

   (20,701  (2,672  (2,276
  

 

 

  

 

 

  

 

 

 

Financing activities

    

Proceeds from issuance of Series 3 preferred stock and warrants, net of issuance costs

   —      —      27,951  

Proceeds from issuance of Series 4 preferred stock and warrants, net of issuance costs

   —      —      18,621  

Proceeds from issuance of Series 5 preferred stock and warrants, net of issuance costs

   —      —      19,704  

Proceeds from issuance of Series 6 preferred stock and warrants, net of issuance costs

   —      —      3,038  

Proceeds from issuance of Series 7 preferred stock and warrants, net of issuance costs

   —      —      19,851  

Proceeds from issuance of Series 8 preferred stock, additional investment right and warrants, net of issuance costs

   —      23,213    —    

Proceeds from issuance of Series 10 preferred stock, additional investment right and warrants, net of issuance costs

   —      23,530    —    

Proceeds from issuance of Series 12 preferred stock and warrants, net of issuance costs

   —      14,962    —    

Proceeds from issuance of Series 13 preferred stock and warrants, net of issuance costs

   —      27,986    —    

Proceeds from issuance of Series 14 preferred stock and warrants, net of issuance costs

   (170  18,900    —    

Proceeds from issuance of Series 15 preferred stock and warrants, net of issuance costs

   32,856    —      —    

Proceeds from issuance of Series 17 preferred stock, net of issuance costs

   54,744    —      —    

Cash paid for Series 16 preferred stock issuance costs

   (104  —      —    

Repayment of 7.5% convertible senior notes

   —      (10,250  —    

Repayment of 5.75% convertible senior notes

   —      (10,913  —    

Repayment of 4% convertible senior subordinated notes

   —      —      (38,515

Other

   (110  (424  (928
  

 

 

  

 

 

  

 

 

 

Net cash provided by financing activities

   87,216    87,004    49,722  
  

 

 

  

 

 

  

 

 

 

Effect of exchange rate changes on cash and cash equivalents

   (355  529    520  

Net increase (decrease) in cash and cash equivalents

   3,384    24,403    (15,162

Cash and cash equivalents at beginning of year

   47,052    22,649    37,811  
  

 

 

  

 

 

  

 

 

 

Cash and cash equivalents at end of year

  $50,436   $47,052   $22,649  
  

 

 

  

 

 

  

 

 

 

   Year Ended December 31, 
   2013  2012  2011 

Operating activities

    

Net loss

  $(43,550 $(101,687 $(62,619

Adjustments to reconcile net loss to net cash used in operating activities:

    

Acquired in-process research and development

   —      29,108    —    

Equity-based compensation expense

   9,066    7,938    5,017  

Depreciation and amortization

   1,570    2,346    2,411  

Noncash interest expense

   513    —      546  

Provision for VAT assessments

   —      (3,402  —    

Other

   365    5    (1,958

Changes in operating assets and liabilities:

    

Accounts receivable

   (227  —      —    

Inventory

   (3,254  (1,586  —    

Prepaid expenses and other current assets

   4,530    (3,759  567  

Other assets

   (846  1,495    (2,452

Accounts payable

   (5,774  3,123    (310

Accrued expenses

   (834  (885  (211

Deferred revenue

   2,636    —      —    

Other liabilities

   (25  4,528    (1,449
  

 

 

  

 

 

  

 

 

 

Total adjustments

   7,720    38,911    2,161  
  

 

 

  

 

 

  

 

 

 

Net cash used in operating activities

   (35,830  (62,776  (60,458
  

 

 

  

 

 

  

 

 

 

Investing activities

    

Purchases of property and equipment

   (1,657  (2,937  (2,703

Proceeds from sales of property and equipment

   123    —      31  

Cash paid for acquisition of assets from S*BIO Pte Ltd.

   —      (17,764  —    
  

 

 

  

 

 

  

 

 

 

Net cash used in investing activities

   (1,534  (20,701  (2,672
  

 

 

  

 

 

  

 

 

 

Financing activities

    

Proceeds from issuance of Series 8 preferred stock, additional investment right and warrants, net of issuance costs

   —      —      23,213  

Proceeds from issuance of Series 10 preferred stock, additional investment right and warrants, net of issuance costs

   —      —      23,530  

Proceeds from issuance of Series 12 preferred stock and warrants, net of issuance costs

   —      —      14,962  

Proceeds from issuance of Series 13 preferred stock and warrants, net of issuance costs

   —      —      27,986  

Proceeds from issuance of Series 14 preferred stock and warrants, net of issuance costs

   —      (170  18,900  

Proceeds from issuance of Series 15 preferred stock and warrants, net of issuance costs

   —      32,856    —    

Proceeds from issuance of Series 17 preferred stock, net of issuance costs

   (105  54,744    —    

Proceeds from issuance of Series 18 preferred stock, net of issuance costs

   14,859    —      —    

Proceeds from issuance of Series 19 preferred stock, net of issuance costs

   29,961    —      —    

Proceeds from issuance of long-term debt, net

   14,501    —      —    

Repayment of 7.5% convertible senior notes

   —      —      (10,250

Repayment of 5.75% convertible senior notes

   —      —      (10,913

Other

   (244  (214  (424
  

 

 

  

 

 

  

 

 

 

Net cash provided by financing activities

   58,972    87,216    87,004  
  

 

 

  

 

 

  

 

 

 

Effect of exchange rate changes on cash and cash equivalents

   (405  (355  529  

Net increase in cash and cash equivalents

   21,203    3,384    24,403  

Cash and cash equivalents at beginning of year

   50,436    47,052    22,649  
  

 

 

  

 

 

  

 

 

 

Cash and cash equivalents at end of year

  $71,639   $50,436   $47,052  
  

 

 

  

 

 

  

 

 

 

See accompanying notes.

CELL THERAPEUTICS, INC.

CONSOLIDATED STATEMENTS OF CASH FLOWS—(Continued)

(In thousands)

 

  Year Ended December 31,   Year Ended December 31, 
  2012   2011   2010   2013   2012   2011 

Supplemental disclosure of cash flow information

            

Cash paid during the period for interest

  $16    $1,025    $3,137    $933    $16    $1,025  
  

 

   

 

   

 

   

 

   

 

   

 

 

Cash paid for taxes

  $—      $—      $—      $—      $—      $—    
  

 

   

 

   

 

   

 

   

 

   

 

 

Supplemental disclosure of noncash financing and investing activities

            

Conversion of Series 3 preferred stock to common stock

  $—      $—      $27,761  
  

 

   

 

   

 

 

Conversion of Series 4 preferred stock to common stock

  $—      $—      $18,621  
  

 

   

 

   

 

 

Conversion of Series 5 preferred stock to common stock

  $—      $—      $19,464  
  

 

   

 

   

 

 

Conversion of Series 6 preferred stock to common stock

  $—      $—      $2,970  
  

 

   

 

   

 

 

Conversion of Series 7 preferred stock to common stock

  $—      $—      $19,273  
  

 

   

 

   

 

 

Conversion of Series 9 preferred stock to common stock

  $—      $25,000    $—      $—      $—      $25,000  
  

 

   

 

   

 

   

 

   

 

   

 

 

Conversion of Series 11 preferred stock to common stock

  $—      $24,957    $—      $—      $—      $24,957  
  

 

   

 

   

 

   

 

   

 

   

 

 

Conversion of Series 12 preferred stock to common stock

  $—      $10,647    $—      $—      $—      $10,647  
  

 

   

 

   

 

   

 

   

 

   

 

 

Conversion of Series 13 preferred stock to common stock

  $—      $19,077    $—      $—      $—      $19,077  
  

 

   

 

   

 

   

 

   

 

   

 

 

Conversion of Series 14 preferred stock to common stock

  $6,736    $6,736    $—      $—      $6,736    $6,736  
  

 

   

 

   

 

   

 

   

 

   

 

 

Conversion of Series 15 preferred stock to common stock

  $15,442    $—      $—      $—      $15,442    $—    
  

 

   

 

   

 

   

 

   

 

   

 

 

Conversion of Series 16 preferred stock to common stock

  $11,240    $—      $—      $—      $11,240    $—    
  

 

   

 

   

 

   

 

   

 

   

 

 

Conversion of Series 17 preferred stock to common stock

  $54,538    $—      $—      $—      $54,538    $—    
  

 

   

 

   

 

   

 

   

 

   

 

 

Exchange of 4% convertible senior subordinated notes for common stock

  $—      $—      $1,848  

Conversion of Series 18 preferred stock to common stock

  $14,859    $—      $—    
  

 

   

 

   

 

 

Conversion of Series 19 preferred stock to common stock

  $29,840    $—      $—    
  

 

   

 

   

 

   

 

   

 

   

 

 

Issuance of Series 9 preferred stock

  $—      $25,000    $—      $—      $—      $25,000  
  

 

   

 

   

 

   

 

   

 

   

 

 

Issuance of Series 11 preferred stock

  $—      $24,957    $—      $—      $—      $24,957  
  

 

   

 

   

 

   

 

   

 

   

 

 

Issuance of Series 16 preferred stock for acquisition of assets from S*BIO Pte. Ltd.

  $11,344    $—      $—      $—      $11,344    $—    
  

 

   

 

   

 

   

 

   

 

   

 

 

Issuance of common stock upon exercise or exchange of common stock purchase warrants

  $17,798    $17,485    $—      $—      $17,798    $17,485  
  

 

   

 

   

 

   

 

   

 

   

 

 

Redemption of Series 8 and 10 preferred stock

  $—      $36,638    $—      $—      $—      $36,638  
  

 

   

 

   

 

   

 

   

 

   

 

 

See accompanying notes.

CELL THERAPEUTICS, INC.

NOTES TO CONSOLIDATED FINANCIAL STATEMENTS

 

1.Description of Business and Summary of Significant Accounting Policies

Description of Business

We are a biopharmaceutical company focused on the acquisition, development and commercialization of less toxic and more effective ways to treat cancer. Our goal is to build a profitable company by generating income from products we develop and commercialize, either alone or with one or more potential strategic partners. We are currently concentrating our efforts on treatments that target blood-related cancers where there is a high unmet medical need. We are primarily focused on commercializing PIXUVRI® (pixantrone) in the E.U. for adult patients with multiply relapsed or refractory aggressive non-Hodgkin lymphoma, or NHL, and conducting a Phase 3 clinical trialprogram of pacritinib for the treatment of patients with myelofibrosis. In September 2012, we initiatedAs of the commercial launchdate of this filing, PIXUVRI in the E.U. PIXUVRI is currentlywas available in eight countries: Austria, Denmark, Finland, France, Germany, Italy, Netherlands, Norway, Sweden and the United Kingdom. We plan to extend the availability of PIXUVRI to France, Italy and Spain, as well as other European countries, in 2013.

We operate in a highly regulated and competitive environment. The manufacturing and marketing of pharmaceutical products require approval from, and are subject to, ongoing oversight by the Food and Drug Administration, or FDA, in the United States, by the European Medicines Agency, or EMA, in the European UnionE.U. and by comparable agencies in other countries. Obtaining approval for a new therapeutic product is never certain and may take many years and may involve expenditure of substantial resources.

Principles of Consolidation

The consolidated financial statements include the accounts of CTI and its wholly-owned subsidiaries, which include Systems Medicine LLC, or SM, and CTI Life Sciences Limited, or CTILS. CTILS opened a branch in Italy in December 2009. We also retain ownership of our branch, Cell Therapeutics Inc. – Sede Secondaria, or CTI (Europe), however, we ceased operations related to this branch in September 2009. In addition, CTI Commercial LLC, a wholly-owned subsidiary, was included in the consolidated financial statements until dissolution in March 2012.

As of December 31, 2012,2013, we also had a 61% interest in our majority-owned subsidiary, Aequus Biopharma, Inc., or Aequus. The remaining interest in Aequus not held by CTI is reported asnoncontrolling interest in the consolidated financial statements.

All intercompany transactions and balances are eliminated in consolidation.

Reverse Stock-Splits

On May 15, 2011 and September 2, 2012, we effected one-for-six and one-for-five reverse stock splits, respectively, collectively referred to as the Stock Splits. Unless otherwise noted, all impacted amounts included in the consolidated financial statements and notes thereto have been retroactively adjusted for the Stock Splits. Unless otherwise noted, impacted amounts include shares of common stock authorized and outstanding, share issuances and cancellations, shares underlying preferred stock, convertible notes, warrants and stock options, shares reserved, conversion prices of convertible securities, exercise prices of warrants and options, and loss per share. Additionally, the Stock Splits impacted preferred stock authorized (but not outstanding because there were no shares of preferred stock outstanding as of the time of the applicable reverse stock split).

LiquidityCapital Requirements

Our accompanying consolidated financial statements have been prepared assuming that we will continue as a going concern, which contemplates realization of assets and the satisfaction of liabilities in the normal course

of business for the twelve-month period following the date of these consolidated financial statements. In 2007, our ability to satisfy obligations upon maturity of convertible notes raised substantial doubt about our ability to continue as a going concern. Since 2007, these obligations have been satisfied.

Our available cash and cash equivalents were $50.4 million as of December 31, 2012. At our currently planned spending rate, we believe that our financial resources, in addition to the expected receipts from European PIXUVRI sales, will be sufficient to fund our operations into the fourth quarter of 2013. Changes in manufacturing, clinical trial expenses, and expansion of our sales and marketing organization in Europe, may consume capital resources earlier than planned. Additionally, we may not receive the country reimbursement rates in Europe for PIXUVRI that we currently assume in planning for 2013 and 2014.

We expect that we will need to raise additional funds and are currently exploring alternative sources of debt and other non-dilutive capital.to develop our business. We may seek to raise such capital through debt financings, partnerships, collaborations, joint ventures or disposition of assets. Our boardBoard of directorsDirectors may issue shares depending on our financial needs and market opportunities, if deemed to be in the

best interest of the shareholders. However, additional funding may not be available on favorable terms or at all. If additional funds are raised by issuing equity securities, substantial dilution to existing shareholders may result. Additional funding may not be available on favorable terms or at all. If we fail to obtain additional capital when needed, we may be required to delay, scale back, or eliminate some or all of our research and development programs, as well as reduce our selling, general and administrative expenses.expenses and/or refrain from making our contractually required payments when due.

Use of Estimates

The preparation of financial statements in conformity with accounting principles generally accepted in the United States requires management to make estimates and assumptions that affect the amounts reported in the consolidated financial statements and accompanying notes. For example, estimates include assumptions used in calculating reserves for sales deductions such as rebates and returns of product sold, allowances for credit losses, excess and obsolete inventory, share-based compensation expense, the allocation of our operating expenses, the allocation of purchase price to acquired assets and liabilities, restructuring charges and our liability for excess facilities, our provision for loss contingencies, the useful lives of fixed assets, the fair value of our financial instruments, our tax provision and related valuation allowance, and determining potential impairment of long-lived assets. Actual results could differ from those estimates.

Certain Risks and ConcentrationsUncertainties

WeOur results of operations are exposedsubject to risks associated with foreign currency transactions insofar as we useexchange rate fluctuations primarily due to our activity in Europe. We report the results of our operations in U.S. dollars, to make contract payments denominated in euros or vice versa.while the functional currency of our foreign subsidiaries is the euro. As the net positions of our unhedged foreign currency transactions fluctuate, our earnings might be negatively affected. In addition, the reported carrying value of our euro-denominated assets and liabilities that remain in our European branches and subsidiaries will be affected by fluctuations in the value of the U.S. dollar as compared to the euro. We currently doreview our foreign currency risk periodically along with hedging options to mitigate such risk.

Financial instruments which potentially subject us to concentrations of credit risk consist of accounts receivable. The Company has accounts receivable from the sale of PIXUVRI from a small number of distributors and health care providers. Further, the Company does not utilize forward exchange contracts orrequire collateral on amounts due from its distributors and is therefore subject to credit risk. The Company has not experienced any typesignificant credit losses to date as a result of hedging instrumentscredit risk concentration and does not consider an allowance for doubtful accounts to hedge foreign exchange risks.be necessary.

Additionally, see Note 18,Customer and Geographic Concentrations, for further concentration disclosure.

Concentrations

We source our drug products for commercial operations and clinical trials from a concentrated group of third party contractors. If we are unable to obtain sufficient quantities of source materials, manufacture or distribute our products to customers from existing suppliers and service providers, or if we were unable to obtain the materials or services from other suppliers, manufacturers or distributors, certain research and development and sales activities may be delayed.

Additionally, see Note 16,Geographic Concentrations, for further concentration disclosure.

Cash and Cash Equivalents

We consider all highly liquid debt instruments with maturities of three months or less at the time acquired to be cash equivalents. Cash equivalents represent short-term investments consisting of investment-grade corporate and government obligations, carried at cost, which approximates market value.

Accounts Receivable

Our accounts receivable balance includes trade receivables related to PIXUVRI sales as of December 31, 2013. We estimate an allowance for doubtful accounts based upon the age of outstanding receivables and our historical experience of collections, which includes adjustments for risk of loss for specific customer accounts. We periodically review the estimation process and make changes to our assumptions as necessary. When it is deemed probable that a customer account is uncollectible, the account balance is written off against the existing allowance. We also consider the customers’ country of origin to determine if an allowance is required based on the uncertainty associated with the recent European financial crisis. As of December 31, 2013, our accounts receivable did not include any balance from a customer in a country that has exhibited financial stress that would have had a material impact on our financial results. We did not record an allowance for doubtful accounts as of December 31, 2013.

Value Added Tax Receivable

Our European operations are subject to a value added tax, or VAT, which is usually applied to all goods and services purchased and sold throughout Europe. The VAT receivable is approximately $8.1$5.7 million and $5.0$8.1 million as of December 31, 20122013 and 2011,2012, of which $5.1$5.6 million and $4.7$5.1 million is included inother assets and $3.0$0.1 million and $0.3$3.0 million is included inprepaid expenses and other current assets as of December 31, 20122013 and 2011,2012, respectively. The collection period of VAT receivable for our European operations ranges from approximately three months to five years. For our Italian VAT receivable, the collection period is approximately three to five years. As of December 31, 2012,2013, the VAT receivable related to operations in Italy is approximately $8.1 million, of which approximately $2.8 million was refunded to us in January 2013 for deposits previously paid to the Italian Tax Authority, or ITA, for VAT assessments as discussed in Note 19,Legal Proceedingsbelow.$5.6 million. We review our VAT receivable balance for impairment whenever events or changes in circumstances indicate the carrying amount might not be recoverable.

Inventory

We began capitalizing costs related to the production of PIXUVRI in February 2012 upon receiving a positive opinion for conditional approval by the EMA’s Committee for Medicinal Products for Human Use, or CHMP, at which time the likelihood of receiving conditional approval to market PIXUVRI in the E.U. was deemed probable. Production costs for our other product candidates continue to be charged to research and development expense as incurred prior to regulatory approval or until our estimate for regulatory approval becomes probable. We carry inventory at the lower of cost or market. The cost of finished goods and work in process is determined using the standard-cost method, which approximates actual cost based on a first-in, first-out method. Inventory includes the cost of materials, third-party contract manufacturing and overhead costs, quality control costs and shipping costs from the manufacturers to the final distribution warehouse associated with the production and distribution of PIXUVRI. We regularly review our inventories for impairment and reserves are established when necessary. Estimates of excess inventory consider our projected sales of the product and the remaining shelf lives of product. In the event we identify excess, obsolete or unsaleable inventory, the value is written down to the net realizable value.

Property and Equipment

Property and equipment are carried at cost, less accumulated depreciation and amortization. Depreciation commences at the time assets are placed in service. We calculate depreciation using the straight-line method over the estimated useful lives of the assets ranging from three to five years for assets other than leasehold improvements. We amortize leasehold improvements over the lesser of their useful life of 10 years or the term of the applicable lease.

Impairment of Long-lived Assets

We review our long-lived assets for impairment whenever events or changes in business circumstances indicate that the carrying amount of assets may not be fully recoverable or that the useful lives of these assets are

no longer appropriate. Each impairment test is based on a comparison of the undiscounted future cash flows to the recorded value of the asset. If an impairment is indicated, the asset is written down to its estimated fair value based on quoted fair market values.

Leases

We analyze leases at the inception of the agreement to classify as either an operating or capital lease. On certain of our lease agreements, the terms include rent holidays, rent escalation clauses and incentives for leasehold improvements. We recognize deferred rent relating to incentives for rent holidays and leasehold improvements and amortize the deferred rent over the term of the leases as a reduction of rent expense. For rent escalation clauses, we recognize rent expense on a straight-line basis equal to the amount of total minimum lease payments over the term of the lease.

Acquisitions

We account for acquired businesses using the acquisition method of accounting, which requires that most assets acquired and liabilities assumed be recognized at fair value as of the acquisition date. Any excess of the consideration transferred over the fair value of the net assets acquired is recorded as goodwill, and the fair value of the acquired in-process research and development, or IPR&D, is recorded on the balance sheet. If the acquired net assets do not constitute a business, the transaction is accounted for as an asset acquisition and no goodwill is recognized. In an asset acquisition, the amount allocated to acquired IPR&D with no alternative future use is charged to expense at the acquisition date.

Fair Value Measurement

Fair value is defined as the exchange price that would be received for an asset or paid to transfer a liability (an exit price) in the principal or most advantageous market for the asset or liability in an orderly transaction between market participants on the measurement date. Fair value measurements are based on a three-tier hierarchy that prioritizes the inputs used to measure fair value. There are three levels of inputs used to measure fair value with Level 1 having the highest priority and Level 3 having the lowest:

Level 1 – Observable inputs, such as unadjusted quoted prices in active markets for identical assets or liabilities.

Level 2 – Observable inputs other than Level 1 inputs, such as quoted prices for similar assets or liabilities, or other inputs that are observable directly or indirectly.

Level 3 – Unobservable inputs that are supported by little or no market activity, requiring an entity to develop its own assumptions.

If the inputs used to measure the financial assets and liabilities fall within more than one level described above, the categorization is based on the lowest level input that is significant to the fair value measurement of the instrument.

Financial Instruments

At December 31, 20122013 and 2011,2012, the carrying value of financial instruments such as receivables and payables approximated their fair values based on the short-term maturities of these instruments. The carrying value of our long-term debt approximated its fair value at December 31, 2013 based on borrowing rates for similar loans and maturities.

Contingencies

We record liabilities associated with loss contingencies to the extent that we conclude the occurrence of the contingency is probable and that the amount of the related loss is reasonably estimable. We record income from gain contingencies only upon the realization of assets resulting from the favorable outcome of the contingent event. See Note 12,14,Collaboration, Licensing and Milestone Agreements and Note 19,21,Legal Proceedings, for further information regarding our current gain and loss contingencies.

Revenue Recognition

We currently have conditional approval to market PIXUVRI in the E.U. Revenue is recognized when there is persuasive evidence of the existence of an agreement, delivery has occurred, prices are fixed or determinable, and collectability is assured. Where the revenue recognition criteria are not met, we defer the recognition of revenue by recording deferred revenue until such time that all criteria under the provision are met.

Product Sales

We sell PIXUVRI directly to health care providers and through a limited number of distributors. We generally record product sales upon receipt of the product by the health care providers and certain distributors at which time title and risk of loss pass. Product sales are recorded net of distributor discounts, estimated government-mandated rebates, trade discounts, and estimated product returns. Reserves are established for these deductions and actual amounts incurred are offset against the applicable reserves. We reflect these reserves as either a reduction in the related account receivable or as an accrued liability depending on the nature of the sales deduction. These estimates are periodically reviewed and adjusted as necessary.

Government-mandated discounts and rebates

Our products are subject to certain programs with government entities in the E.U. whereby pricing on products is discounted below distributor list price to participating health care providers. These discounts are provided to participating health care providers either at the time of sale or through a claim by the participating health care providers for a rebate. Due to estimates and assumptions inherent in determining the amount of government discounts and rebates, the actual amount of future claims may be different from our estimates, at which time we would adjust our reserves accordingly.

Product returns and other deductions

At the time of sale, we also record estimates for certain sales deductions such as product returns and distributor discounts and incentives. We offer certain distributors a limited right of return or replacement of product that is damaged in certain instances. When we cannot reasonably estimate the amount of future product returns and/or other sales deductions, we do not recognize revenue until the risk of product return and additional sales deductions have been substantially eliminated. To date, there have been no PIXUVRI product returns.

Collaboration agreements

We evaluate collaboration agreements to determine whether the multiple elements and associated deliverables can be considered separate units of accounting in accordance with ASC 605-25Revenue Recognition – Multiple-Element Arrangements. If it is determined that the deliverables under the collaboration agreement are a single unit of accounting, all amounts received or due, including any upfront payments, are recognized as revenue over the performance obligation periods of each agreement. Following the completion of the performance obligation period, such amounts will be recognized as revenue when collectability is reasonably assured.

The assessment of multiple element arrangements requires judgment in order to determine the allocation of revenue to each deliverable and the appropriate point in time, or period of time, that revenue should be recognized. In order to account for these agreements, we identify deliverables included within the agreement and evaluate which deliverables represent separate units of accounting based on whether certain criteria are met, including whether the delivered element has standalone value to the collaborator. The consideration received is allocated among the separate units of accounting, and the applicable revenue recognition criteria are applied to each of the separate units.

Milestone payments under the collaboration agreement are generally aggregated into three categories for reporting purposes: (i) development milestones, (ii) regulatory milestones, and (iii) sales milestones. Development milestones are typically payable when a product candidate initiates or advances into different clinical trial phases. Regulatory milestones are typically payable upon submission for marketing approval with the U.S. Food and Drug Administration, or FDA, or other countries’ regulatory authorities or on receipt of actual marketing approvals for the compound or for additional indications. Sales milestones are typically payable when annual sales reach certain levels.

At the inception of each agreement that includes milestone payments, we evaluate whether each milestone is substantive and at risk to both parties on the basis of the contingent nature of the milestone. This evaluation includes an assessment of whether (a) the consideration is commensurate with either (1) the entity’s performance to achieve the milestone, or (2) the enhancement of the value of the delivered item(s) as a result of a specific outcome resulting from the entity’s performance to achieve the milestone, (b) the consideration relates solely to past performance and (c) the consideration is reasonable relative to all of the deliverables and payment terms within the arrangement. We evaluate factors such as the scientific, regulatory, commercial and other risks that must be overcome to achieve the respective milestone, the level of effort and investment required to achieve the respective milestone and whether the milestone consideration is reasonable relative to all deliverables and payment terms in the arrangement in making this assessment. Non-refundable development and regulatory milestones that are expected to be achieved as a result of our efforts during the period of substantial involvement are considered substantive and are recognized as revenue upon the achievement of the milestone, assuming all other revenue recognition criteria are met.

Cost of Product Sold

Cost of product sold includes third party manufacturing costs, shipping costs, contractual royalties, and other costs of PIXUVRI product sold. Cost of product sold also includes any necessary allowances for excess inventory that may expire and become unsalable. We did not record an allowance for excess inventory as of December 31, 2013.

Research and Development Expenses

Research and development costs are expensed as incurred in accordance with Financial Accounting Standards Board, or FASB, Accounting Standards Codification, or ASC 730,Research and Development. Research and development expenses include related salaries and benefits, clinical trial and related manufacturing costs, contract and other outside service fees, and facilities and overhead costs related to our research and development efforts. Research and development expenses also consist of costs incurred for proprietary and collaboration research and development and include activities such as product registries and investigator-sponsored trials. In instances where we enter into agreements with third parties for research and development activities, we may prepay fees for services at the initiation of the contract. We record the prepayment as a prepaid asset and amortize the asset into research and development expense over the period of time the contracted research and development services are performed. Other types of arrangements with third parties may be fixed fee or fee for service, and may include monthly payments or payments upon completion of milestones or receipt of deliverables. In instances where we enter into cost-sharing arrangements, all research and development costs reimbursed by the collaborator are a reduction to research and development expense while research and

development costs paid to the collaborator are an addition to research and development expense. We expense upfront license payments related to acquired technologies whichthat have not yet reached technological feasibility and have no alternative future use.

Foreign Currency Translation and Transaction Gains and Losses

We record foreign currency translation adjustments and transaction gains and losses in accordance with ASC 830,Foreign Currency Matters.For our operations that have a functional currency other than the U.S. dollar, gains and losses resulting from the translation of the functional currency into U.S. dollars for financial statement presentation are not included in determining net loss, but are accumulated in the cumulative foreign currency translation adjustment account as a separate component of shareholders’ equity (deficit), except for intercompany transactions that are of a short-term nature with entities that are consolidated, combined or accounted for by the equity method in our consolidated financial statements. We and our subsidiaries also have transactions in foreign currencies other than the functional currency. We record transaction gains and losses in our consolidated statements of operations related to the recurring measurement and settlement of such transactions.

Income Taxes

We record a tax provision for the anticipated tax consequences of our reported results of operations. The provision for income taxes is computed using the asset and liability method, under which deferred tax assets and liabilities are recognized for the expected future tax consequences of temporary differences between the financial reporting and tax base of assets and liabilities, and for operating losses and tax credit carryforwards. Deferred tax assets and liabilities are measured using the currently enacted tax rates that apply to taxable income in effect for the years in which those tax assets are expected to be realized or settled. We record a valuation allowance to reduce deferred tax assets to the amount that is more likely than not to be realized.

Net Loss per Share

Basic net income (loss) per share is calculated based on the net income (loss) attributable to common shareholders divided by the weighted average number of shares outstanding for the period excluding any dilutive

effects of options, warrants, unvested share awards and convertible securities. Diluted net income (loss) per common share assumes the conversion of all dilutive convertible securities, such as convertible debt and convertible preferred stock using the if-converted method, and assumes the exercise or vesting of other dilutive securities, such as options, warrants and restricted stock using the treasury stock method.

Recently Adopted Accounting Standards

In December 2010, the FASB issued additional guidance on when to perform Step 2 of the goodwill impairment test for reporting units with zero or negative carrying amounts. The criteria for evaluating Step 1 of the goodwill impairment test and proceeding to Step 2 were amended for reporting units with zero or negative carrying amounts and require performing Step 2 if qualitative factors indicate that it is more likely than not that a goodwill impairment exists. For public entities, this guidance was effective for fiscal years, and interim periods within those years, beginning after December 15, 2010. Upon adoption of this guidance on January 1, 2011, we performed Step 2 of the goodwill impairment test. Based on a valuation using the income, market and cost approaches, we determined that all of our $17.1 million in goodwill was impaired. The related charge was recorded as a cumulative-effect adjustment to beginning retained earnings on January 1, 2011. See Note 3,4,Goodwill,for additional information.

In June 2011, the FASB issued guidance amending the presentation requirements for comprehensive income. For public entities, this guidance was effective for fiscal years, and interim periods within those years, beginning after December 15, 2011 with early adoption permitted. Subsequently, in December 2011, the FASB deferred the effective date of the portion of the June 2011 accounting standards update requiring separate

presentation of reclassifications out of accumulated other comprehensive income as discussed below. Upon adoption on January 1, 2012, we had the option to report total comprehensive income, including components of net income and components of other comprehensive income, as a single continuous statement or in two separate, but consecutive statements. We elected to present comprehensive income in two separate, but consecutive statements as part of the accompanying consolidated financial statements.

Recently Issued Accounting Standards

In February 2013, the FASB issued guidance requiring presentation of amounts reclassified from each component of accumulated other comprehensive income. In addition, disclosure is required of the effects of significant reclassifications on income statement line items either on the face of the statement where net income is presented or as a separate disclosure in the notes to the financial statements. For public entities, this guidance iswas effective prospectively for reporting periods beginning after December 15, 2012. The adoption of this guidance did not have a material impact on our consolidated financial statements.

Recently Issued Accounting Standards

In March 2013, the Financial Accounting Standards Board, or FASB, issued guidance to clarify when to release cumulative foreign currency translation adjustments when an entity ceases to have a controlling financial interest in a subsidiary or group of assets within a foreign entity. The amendment is effective prospectively for fiscal years, and interim periods within those years, beginning after December 15, 2013 and should be applied prospectively to derecognition events occurring after the effective date. Early adoption is permitted. We do not expect the adoption of this guidance willto have a material impact on our consolidated financial statements.

In July 2013, the FASB issued guidance on the presentation of an unrecognized tax benefit when a net operating loss carryforward, similar tax loss or tax carryforward exists. FASB concluded that an unrecognized tax benefit should be presented as a reduction of a deferred tax asset except in certain circumstances the unrecognized tax benefit should be presented as a liability and should not be combined with deferred tax assets. The amendment is effective prospectively for fiscal years, and interim periods within those years, beginning after December 15, 2013, with early adoption permitted. We are currently evaluating the impact this amendment may have on our consolidated financial statements.

Reclassifications

Certain prior year items have been reclassified to conform to current year presentation.

 

2.Inventory

The components of inventories are composed of the following as of December 31, 2013 and 2012 (in thousands):

   2013   2012 

Finished goods

  $601    $220  

Work-in-process

   4,473     1,406  
  

 

 

   

 

 

 

Total inventories

  $5,074    $1,626  
  

 

 

   

 

 

 

3.Property and Equipment

Property and equipment is composed of the following as of December 31, 20122013 and 20112012 (in thousands):

 

   2012  2011 

Furniture and office equipment

  $11,743   $13,375  

Leasehold improvements

   5,077    1,755  

Lab equipment

   411    411  
  

 

 

  

 

 

 
   17,231    15,541  

Less: accumulated depreciation and amortization

   (10,446  (11,937
  

 

 

  

 

 

 
  $6,785   $3,604  
  

 

 

  

 

 

 

   2013  2012 

Furniture and office equipment

  $10,913   $11,743  

Leasehold improvements

   5,078    5,077  

Lab equipment

   143    411  
  

 

 

  

 

 

 
   16,134    17,231  

Less: accumulated depreciation and amortization

   (10,656  (10,446
  

 

 

  

 

 

 
  $5,478   $6,785  
  

 

 

  

 

 

 

Depreciation expense of $1.6 million, $2.3 million $2.4 million and $1.8$2.4 million was recognized during 2013, 2012 2011 and 2010,2011, respectively.

 

3.4.Goodwill

In January 2011, we adopted the accounting standards update onIntangibles – Goodwill and Other (Topic 350), which provided additional guidance on when to perform Step 2 of the goodwill impairment test for reporting units with zero or negative carrying amounts. Upon adoption of the guidance, we determined that it was more likely than not that a goodwill impairment existed. On January 1, 2011, the implied fair value of goodwill for the reporting unit, after considering unrecognized in-process research and development, was zero. An impairment charge of $17.1 million was recorded in retained earnings as a cumulative-effective adjustment.

The following table presents the effects of the cumulative-effect application (in thousands):

 

  Accumulated
Deficit
 Total  Shareholders’
Deficit
   Accumulated
Deficit
 Total Shareholders’
Deficit
 

Balance at December 31, 2010

  $(1,576,643 $(5,145  $(1,576,643) $(5,145

Cumulative effect adjustment

   (17,064  (17,064   (17,064)  (17,064
  

 

  

 

   

 

  

 

 

Adjusted Balance at January 1, 2011

  $(1,593,707 $(22,209  $(1,593,707) $(22,209
  

 

  

 

   

 

  

 

 

 

4.5.Acquisitions

In April 2012, we entered into an asset purchase agreement with S*BIO Pte Ltd., or S*BIO, to acquire all right, title and interest in, and assume certain liabilities relating to, certain intellectual property and other assets related to compounds SB1518 (also referred to as “pacritinib”) and SB1578, or the Seller Compounds, which inhibit Janus Kinase 2, commonly referred to as JAK2.Compounds. In consideration of the assets and rights acquired under the agreement, we made a payment of $15.0 million in cash and issued 15,000 shares of Series 16 convertible preferred stock, or Series 16 Preferred Stock, to S*BIO at closing in May 2012. Each share of Series 16 preferred stockPreferred Stock had a stated value of $1,000 per share. In June 2012, all outstanding shares of our Series 16 Preferred Stock were automatically converted into 2.5 million shares of our common stock at a conversion price of $5.95 per share, subject to a 19.99% blocker provision.

The total initial purchase consideration was as follows (in thousands):

 

Cash

  $ 15,000  

Fair value of Series 16 Preferred Stock

   11,344  

Transaction costs

   2,764  
  

 

 

 

Total initial purchase consideration

  $29,108  
  

 

 

 

The transaction was treated as an asset acquisition as it was determined that the assets acquired did not meet the definition of a business. We determined that the acquired assets can only be economically used for the specific and intended purpose and have no alternative future use after taking into consideration further research and development, regulatory and marketing approval efforts required in order to reach technological feasibility. Accordingly, the entire initial purchase consideration of $29.1 million was immediately expensed toacquired in-process research and development for the year ended December 31, 2012. The contingent consideration arrangement as discussed below will be recognized when the contingency is resolved and the consideration is paid or becomes payable.

As part of the consideration, S*BIO also has a contingent right to certain milestone payments from us up to an aggregate amount of $132.5 million if certain U.S., E.U. and Japanese regulatory approvals are obtained or if certain worldwide net sales thresholds are met in connection with any pharmaceutical product containing or

comprising any Seller Compound for use for specific diseases, infections or other conditions. In addition, S*BIO will also be entitled to receive royalty payments from us at incremental rates in the low-single digits based on certain worldwide net sales thresholds on a product-by-product and country-by-country basis.

At our election, we may pay up to 50% of any milestone payments to S*BIO through the issuance of shares of our common stock or shares of our preferred stock convertible into our common stock in lieu of cash.

 

5.6.Accrued Expenses

Accrued expenses consisted of the following as of December 31, 20122013 and 20112012 (in thousands):

 

  2012   2011   2013   2012 

Clinical and investigator-sponsored trial expenses

  $3,301    $2,807    $3,360    $3,301  

Employee compensation and related expenses

   3,904     4,771     3,035     3,904  

Insurance financing and accrued interest expenses

   598     587     611     598  

Legal expenses

   268     388     573     268  

Manufacturing expenses

   247     847     225     247  

Co-development expenses

   153     997  

Rebates and royalties

   186     —    

Other

   1,738     667     1,479     1,891  
  

 

   

 

   

 

   

 

 
  $10,209    $11,064    $9,469    $10,209  
  

 

   

 

   

 

   

 

 

 

6.7.Leases

Lease Agreements

We lease our office space under operating leases for our U.S. and European offices. Rent expense amounted to $2.0 million, $2.7 million $1.5 million and $3.9$1.5 million for the years ended December 31, 2013, 2012 2011 and 2010,2011, respectively. Rent expense is net of sublease income and amounts offset to excess facilities charges.

In January 2012, we entered into an agreement with Selig Holdings Company LLC, or Selig, to lease approximately 66,000 square feet of office space in Seattle, Washington. The term of this lease is for a period of 120 months, which commenced on May 1, 2012. We have two five-year options to extend the term of the lease at a market rate determined according to the lease. No rent payments were due during the first five months of the lease term. The initial rent amount is based on $27.00 per square foot per annum for the remainder of the first 12 months, with rent increasing three percent over the prior year’s rent amount for each year thereafter for the duration of the lease. In addition, we were provided an allowance of $3.3 million for certain tenant improvements made by us. As of December 31, 2012, we had a receivable of $1.5 million included inprepaid expenses and other current assetsrelated to the unpaid portion of incentives for tenant improvements owed to us by Selig. We had no receivable related to incentives for tenant improvements as of December 31, 2013.

Future Minimum Lease Payments

Future minimum lease commitments for non-cancelable operating leases at December 31, 20122013 are as follows (in thousands):

 

   Operating
Leases
 

2013

  $2,347  

2014

   2,299  

2015

   2,233  

2016

   2,201  

2017

   2,261  

Thereafter

   10,520  
  

 

 

 

Total minimum lease commitments

  $21,861  
  

 

 

 

   Operating
Leases
 

2014

  $2,534  

2015

   2,508  

2016

   2,220  

2017

   2,280  

2018

   2,341  

Thereafter

   8,264  
  

 

 

 

Total minimum lease commitments

  $20,147  
  

 

 

 

Liability for Excess Facilities

During the year ended December 31, 2005, we reduced our workforce in the United States and Europe. In conjunction with this reduction in force, we vacated a portion of our laboratory and office facilities and recorded excess facilities charges. Charges for excess facilities relate to our lease obligation for excess laboratory and office space in the United States that we vacated as a result of the restructuring plan. We recorded these restructuring charges when we ceased using this space.

During the year ended December 31, 2010, we recorded an additional liability of $1.5 million for excess facilities under an operating lease upon vacating a portion of our corporate office space. The related charge for excess facilities was recorded as a component of rent expense, which is included inresearch and development andselling, general and administrative expenses for the year ended December 31, 2010.

The following table summarizes the changes in the liability for excess facilities during the years ended December 31, 2012 and 2011 (in thousands):

 

  2005
Activities
 2010
Activities
 Total  Excess
Facilities
Liability
   2005
Activities
 2010
Activities
 Total Excess
Facilities
Liability
 

Balance at January 1, 2011

  $550   $1,410   $1,960    $550   $1,410   $1,960  

Adjustments

   40    102    142     40    102    142  

Payments

   (375  (982  (1,357   (375  (982  (1,357
  

 

  

 

  

 

   

 

  

 

  

 

 

Balance at December 31, 2011

   215    530    745     215    530    745  

Adjustments

   (32  (62  (94   (32  (62  (94

Payments

   (183  (468  (651   (183  (468  (651
  

 

  

 

  

 

   

 

  

 

  

 

 

Balance at December 31, 2012

  $—     $—     $—      $—     $—     $—    
  

 

  

 

  

 

   

 

  

 

  

 

 

We will periodically evaluate our existing needs and other future commitments to determine whether we should record additional excess facilities charges or adjustments to such charges.

 

7.8.Long-term ObligationsOther Liabilities

Long-term obligationsOther liabilities consisted of the following as of December 31, 20122013 and 20112012 (in thousands):

 

   2012  2011 

Deferred rent

  $5,003   $213  

Excess facilities liability

   —      745  

Reserve for VAT assessments

   —      2,947  

Other long-term obligations

   31    50  
  

 

 

  

 

 

 
   5,034    3,955  

Less current portion

   (393  (970
  

 

 

  

 

 

 
  $4,641   $2,985  
  

 

 

  

 

 

 
   2013  2012 

Deferred rent

  $4,769   $5,003  

Other long-term obligations

   1,281    31  
  

 

 

  

 

 

 
   6,050    5,034  

Less: other current liabilities

   (393  (393
  

 

 

  

 

 

 
  $5,657   $4,641  
  

 

 

  

 

 

 

The balance of deferred rent as of December 31, 2013 and 2012 relates to incentives for rent holidays and leasehold improvements associated with our operating lease for office space as discussed in Note 6,7,Leases. We reduced our reserve for VAT assessmentsThe balance of other long-term obligations includes a fee in 2012 as a resultthe amount of our change in estimate of the likelihood of future loss.$1.3 million payable to Hercules Technology Growth Capital. See Note 19,10,Legal Proceedings,Long-term Debt, for additional information.

8.9.Convertible Notes

The following tables summarize the changes in the principal balances of our convertible notes during the yearsyear ended December 31, 2011 and 2010 (in thousands):2011:

 

  Balance at
January 1,
2011
   Exchanged Matured Balance at
December 31,
2011
   Balance at
January 1,
2011
   Exchanged   Matured Balance at
December 31,
2011
 

7.5% convertible senior notes

  $10,250    $—     $(10,250 $—      $10,250    $—      $(10,250 $—    

5.75% convertible senior notes

   10,913     —      (10,913  —       10,913     —       (10,913  —    
  

 

   

 

  

 

  

 

   

 

   

 

   

 

  

 

 

Total

  $21,163    $—     $(21,163 $—      $21,163    $—      $(21,163 $—    
  

 

   

 

  

 

  

 

   

 

   

 

   

 

  

 

 
  Balance at
January 1,
2010
   Exchanged Matured Balance at
December 31,
2010
 

7.5% convertible senior notes

  $10,250    $—     $—     $10,250  

5.75% convertible senior notes

   10,913     —      —      10,913  

4.0% convertible senior subordinated notes

   40,363     (1,848  (38,515  —    
  

 

   

 

  

 

  

 

 

Total

  $61,526    $(1,848 $(38,515 $21,163  
  

 

   

 

  

 

  

 

 

Convertible Notes Exchange

10.Long-term Debt

In May 2010,March 2013, we entered into exchange agreementsa Loan and Security Agreement with certain holdersHercules Technology Growth Capital, Inc., or HTGC, for a senior secured term loan of up to $15.0 million. The first $10.0 million was funded in March 2013, and we exercised our option to borrow an additional $5.0 million in December 2013. The interest rate on the term loan floats at a rate per annum equal to 12.25% plus the amount by which the prime rate exceeds 3.25%. The term loan is repayable in 30 equal monthly installments of principal and interest (mortgage style) over 42 months, including an initial interest-only period of 12 months after closing. The loan obligations are secured by a first priority security interest on substantially all of our 4% convertible senior subordinated notes,personal property except our intellectual property and subject to certain other exceptions. We paid a facility charge of $150,000 at closing and a fee in the amount of $1.3 million is payable to HTGC on the date on which the term loan is paid or 4% Notes, pursuant tobecomes due and payable in full. We recorded debt discount of $2.1 million, of which $1.7 million is unamortized as of December 31, 2013. We recorded issuance costs of $0.3 million, of which $0.3 million is unamortized as of December 31, 2013.

In addition, we issued approximately 0.1a warrant to HTGC to purchase shares of common stock. The warrant is exercisable for five years from the date of issuance for 0.7 million shares of common stock. The initial exercise price of the warrant is $1.1045 per share of common stock. The exercise price and number of shares of common stock issuable upon exercise are subject to antidilution adjustments in certain events, including if within 12 months after closing the Company issues shares of common stock or securities that are exercisable or convertible into shares of common stock in transactions not registered under the Securities Act of 1933, as amended, at an effective price per share of common stock that is less than the exercise price of the warrant, then the exercise price shall automatically be reduced to equal the price per share of common stock in such transaction and the number of shares will be increased proportionately. Since the warrant did not meet the considerations necessary for equity classification in the applicable authoritative guidance, we determined the warrant is a liability instrument that is marked to fair value with changes in fair value recognized through earnings at each reporting period. As of the issuance date and December 31, 2013, we estimated the fair value of the warrant to be $0.5 million and $1.0 million, respectively. We classified the warrant as Level 2 in the fair value hierarchy as the significant inputs used in determining fair value are considered observable market data. In January 2014, all of the warrant was exercised into 0.5 million shares of common stock upon conversion of the 4% Notes as defined in ASC 470-20,Debt with Conversion and Other Options, in exchange for $1.8 million aggregate outstanding principal amount of our 4% Notes. The transactions were accounted for as induced conversions since, for the purpose of ASC 470-20, the issuance of the common stock effectively resulted in the change to the conversion privileges provided in the terms of our 4% Notes at issuance. We recorded $2.0 million indebt conversion expense for the year ended December 31, 2010. In May 2010, we delivered a notice of termination of the exchange agreements to each of the holders’ party to the exchange agreements.via cashless exercise.

 

9.11.Preferred Stock

Prior to the effective date of the Stock Splits, we completed several preferred stock transactions during the years 2010, 2011 and 2012, each of which is described below. All outstanding shares of the preferred stock issued in these transactions converted to common stock or were redeemed, in each case, prior to the effective date of the Stock Splits. Accordingly, for purposes of the descriptions of these transactions included in this Note 9,11,

Preferred Stock, the number of shares of preferred stock issued, converted and redeemed and the initial stated value of shares of preferred stock issued are not adjusted to reflect the Stock Splits. However, the number of shares of common stock issued upon conversion of the preferred stock, the conversion price of common stock issued upon conversion, the exercise prices of warrants issued and the number of shares of common stock issued or issuable upon exercise or exchange of the warrants in these transactions are adjusted to reflect the Stock Splits.

Series 3 Convertible Preferred Stock

In January 2010, we issued 30,000 shares of our Series 3 convertible preferred stock, or Series 3 Preferred Stock, and warrants to purchase up to 0.3 million shares of our common stock, or the Series 3 Warrants, for gross proceeds of $30.0 million. Issuance costs related to this transaction were $2.2 million, including the fair value of the placement agent warrants discussed below. The Series 3 Warrants had an exercise price of $35.40 per share of our common stock. We estimated the $7.1 million fair value of the Series 3 Warrants using the Black-Scholes pricing model. For the year ended December 31, 2010, we recognized $17.3 million individends and deemed dividends on preferred stock upon allocation of the proceeds to the components of this transaction. In January 2010, all 30,000 shares of our Series 3 Preferred Stock were converted into 0.8 million shares of our common stock at a conversion price of $36.41 per share.

In July 2010, we entered into a privately negotiated exchange agreement with a certain holder of the Series 3 Warrants to exchange Series 3 Warrants to purchase up to 0.1 million shares of our common stock for the same number of warrants to purchase shares of our common stock at an exercise price of $12.60 per share, or the Exchange Warrants. The Exchange Warrants were exercisable six months and one day after the date of issuance and expire in January 2015. In addition, the exercisability of the Exchange Warrants was subject to, and conditioned upon shareholder approval of an increase in the number of authorized shares of our common stock available for issuance, which shareholders approved in September 2010. We estimated the $0.8 million fair value of the Exchange Warrants using the Black-Scholes pricing model. The remaining Series 3 Warrants expired in January 2011. As of December 31, 2012, the Exchange Warrants to purchase up to 0.1 million shares of our common stock remained outstanding.

In connection with this offering, we also issued warrants to purchase up to 8,230 shares of our common stock to the placement agent, which were estimated to have a fair value of $0.2 million using the Black-Scholes pricing model. These warrants had an exercise price of $45.51 per share and expired in January 2011.

Series 4 Convertible Preferred Stock

In April 2010, we issued 20,000 shares of our Series 4 convertible preferred stock, or Series 4 Preferred Stock, and warrants to purchase up to 0.7 million shares of our common stock for gross proceeds of $20.0 million. Issuance costs related to this transaction were $1.4 million. The warrants have an exercise price of $18.087 per share of our common stock, were exercisable six months and one day after the date of issuance and expire in April 2014. We estimated the $5.6 million fair value of the warrants using the Black-Scholes pricing model. As the warrants include a redemption feature that may be triggered upon certain fundamental transactions that are outside of our control, we classified these warrants as mezzanine equity. For the year ended December 31, 2010, we recognized $15.5 million individends and deemed dividends on preferred stock upon allocation of the proceeds to the components of this transaction. In April 2010, all 20,000 shares of our Series 4 Preferred Stock were converted into 1.3 million shares of our common stock at a conversion price of $15.00 per share. As of December 31, 2012, warrants to purchase up to 0.7 million shares of our common stock remained outstanding.

Series 5 Convertible Preferred Stock

In May 2010, we issued 21,000 shares of our Series 5 convertible preferred stock, or Series 5 Preferred Stock, and warrants to purchase up to 0.9 million shares of our common stock for gross proceeds of $21.0 million. Issuance costs related to this transaction were $1.5 million, including the fair value of the placement agent warrants discussed below. The warrants have an exercise price of $15.00 per share of our common stock and were exercisable six months and one day after the date of issuance and expire in November 2014. In addition, the exercisability of the warrants was subject to, and conditioned upon shareholder approval of an increase in the number of authorized shares of our common stock available for issuance, which shareholders approved in September 2010. We estimated the $6.0 million fair value of the warrants using the Black-Scholes pricing model. As the warrants include a redemption feature that may be triggered upon certain fundamental transactions that are outside of our control, we classified these warrants as mezzanine equity. For the year ended December 31, 2010, we recognized $14.6 million individends and deemed dividends on preferred stock upon allocation of the proceeds to the components of this transaction. In May 2010, all 21,000 shares of our Series 5 Preferred Stock were converted into 1.8 million shares of our common stock at a conversion price of $12.00 per share. As of December 31, 2012, warrants to purchase up to 0.9 million shares of our common stock remained outstanding.

In connection with this offering, we also issued warrants to purchase up to 35,000 shares of our common stock to the placement agent, which are classified in mezzanine equity due to the same redemption feature described above. The warrants were estimated to have a fair value of $0.2 million using the Black-Scholes pricing model. These warrants have an exercise price of $15.00 per share and were exercisable six months and

one day after the date of issuance and expire in May 2015. The exercisability of the warrants was subject to, and conditioned upon, our receipt of the shareholder approval as described above. As of December 31, 2012, warrants to purchase up to 35,000 shares of our common stock issued to the placement agent remained outstanding.

Series 6 Convertible Preferred Stock

In July 2010, we issued 4,060 shares of our Series 6 convertible preferred stock, or Series 6 Preferred Stock and warrants to purchase up to 0.2 million shares of our common stock for gross proceeds of $4.1 million. Issuance costs related to this transaction were $1.1 million, including the fair value of the placement agent warrants discussed below. The warrants have an exercise price of $12.60 per share of our common stock and were exercisable six months and one day after the date of issuance and expire in January 2015. In addition, the exercisability of the warrants was subject to, and conditioned upon receipt of shareholder approval of an increase in the number of authorized shares of our common stock available for issuance, which shareholders approved in September 2010. We estimated the $1.1 million fair value of the warrants using the Black-Scholes pricing model. As the warrants include a redemption feature that may be triggered upon certain fundamental transactions that are outside of our control, we classified these warrants as mezzanine equity. For the year ended December 31, 2010, we recognized $3.1 million individends and deemed dividends on preferred stock upon allocation of the proceeds to the components of this transaction. In July 2010, all 4,060 shares of our Series 6 Preferred Stock were converted into 0.4 million shares of our common stock at a conversion price of $10.50 per share. As of December 31, 2012, warrants to purchase up to 0.2 million shares of our common stock remained outstanding.

In connection with this offering, we also issued warrants to purchase up to 11,600 shares of our common stock to the placement agent, which are classified in mezzanine equity due to the same redemption feature described above. The warrants were estimated to have a fair value of $0.1 million using the Black-Scholes pricing model. These warrants have an exercise price of $12.60 per share and were exercisable six months and one day after the date of issuance and expire in January 2015. The exercisability of the warrants was also subject to, and conditioned upon, our receipt of the shareholder approval as described above. As of December 31, 2012, warrants to purchase up to 11,600 shares of our common stock issued to the placement agent remained outstanding.

Series 7 Convertible Preferred Stock

In October 2010, we issued 21,000 shares of our Series 7 convertible preferred stock, or Series 7 Preferred Stock, and warrants to purchase up to 0.8 million shares of our common stock for gross proceeds of $21.0 million. Issuance costs related to this transaction were $1.7 million, including the fair value of the placement agent warrants discussed below. The warrants have an exercise price of $13.50 per share of our common stock, were exercisable six months and one day after the date of issuance and expire in October 2015. We estimated the $5.2 million fair value of the warrants using the Black-Scholes pricing model. For the year ended December 31, 2010, we recognized $14.4 million individends and deemed dividends on preferred stock upon allocation of the proceeds to the components of this transaction. In October 2010, all 21,000 shares of our Series 7 Preferred Stock were converted into 1.9 million shares of our common stock at a conversion price of $11.10 per share. As of December 31, 2012, warrants to purchase 0.8 million shares of our common stock remained outstanding.

In connection with this offering, we also issued warrants to purchase up to 37,838 shares of our common stock to the placement agent, which were estimated to have a fair value of $0.3 million using the Black-Scholes pricing model. These warrants have an exercise price of $13.80 per share, were exercisable six months and one day after the date of issuance and expire in October 2015. As of December 31, 2012, warrants to purchase up to 37,838 shares of our common stock issued to the placement agent remained outstanding.

Series 8 and 9 Preferred Stock

In January 2011, we issued to an institutional investor, or the Investor, 25,000 shares of Series 8 non-convertible preferred stock, or Series 8 Preferred Stock, warrants to purchase up to 0.8 million shares of our

common stock and an additional investment right to purchase up to 25,000 shares of Series 9 convertible preferred stock, or Series 9 Preferred Stock, for an aggregate offering price of $25.0 million. The aggregate offering price was reduced by a 5% commitment fee retained by the Investor for total gross proceeds received of $23.7 million. We allocated the proceeds on a relative fair value basis, of which $18.5 million, $1.3 million and $3.9 million was allocated to the Series 8 Preferred Stock, warrants and additional investment right, respectively. Issuance costs related to this transaction were approximately $0.5 million.

The shares of Series 8 Preferred Stock accrued annual dividends at the rate of 10% from the date of issuance, payable in the form of additional shares of Series 8 Preferred Stock. The shares of Series 8 Preferred Stock were redeemable by the Company at any time after issuance, either in cash or by offset against recourse notes fully secured with marketable securities, or Recourse Notes, which were issued by the Investor to the Company in connection with the exercise of the warrants and the additional investment right as discussed below.

Each warrant had an exercise price of $11.634 per share of our common stock. The warrants were exercisable immediately and had an expiration date in January 2013. The holder of the warrants had the option to pay the exercise price for the warrant either in cash or through the issuance of Recourse Notes to the Company. The Investor exercised all of the warrants to purchase 0.8 million shares of common stock for a total of $8.8 million through the issuance of Recourse Notes by the Investor to the Company.

Each additional investment right had an exercise price of $1,000 per share of Series 9 Preferred Stock. The additional investment right was exercisable immediately upon issuance and had an expiration date in February 2011. The holder of the additional investment right had the option to pay the exercise price in cash or through issuance of Recourse Notes to the Company. The Investor exercised the entire additional investment right to purchase 25,000 shares of Series 9 Preferred Stock for a total of $25.0 million through the issuance of Recourse Notes by the Investor to the Company. The Investor also elected to convert all 25,000 shares of Series 9 Preferred Stock into 2.1 million shares of our common stock at a conversion price of $11.634 per share.

In March 2011, we redeemed all 25,000 outstanding shares of Series 8 Preferred Stock (plus accrued dividends). Each share of Series 8 Preferred Stock (plus accrued dividends) was offset by $1,350 principal amount of Recourse Notes (plus accrued interest), regardless of the issuance date of the shares of Series 8 Preferred Stock and Recourse Notes. We recognized $0.4 million in accrued dividends on the Series 8 Preferred Stock and $0.1 million accrued interest on the Recourse Notes through the redemption date, both of which are included individends and deemed dividends on preferred stock for the year ended December 31, 2011.Additionally, we recognized $15.5 million individends and deemed dividends on preferred stockfor the year ended December 31, 2011 upon redemption of the Series 8 Preferred Stock equal to the difference between the $33.9 million principal balance of Recourse Notes, including accrued interest, and $18.4 million carrying amount of Series 8 Preferred Stock, including accrued dividends.

Series 10 and 11 Preferred Stock

In February 2011, we issued to the Investor 24,957 shares of Series 10 non-convertible preferred stock, or Series 10 Preferred Stock, warrants to purchase up to 0.9 million shares of our common stock and an additional investment right to purchase up to 24,957 shares of Series 11 convertible preferred stock, or Series 11 Preferred

Stock, for an aggregate offering price of approximately $25.0 million. The aggregate offering price was reduced by a 5% commitment fee retained by the Investor for total gross proceeds received of $23.7 million. We allocated the proceeds on a relative fair value basis, of which $18.5 million, $1.3 million and $3.9 million was allocated to the Series 10 Preferred Stock, warrants and additional investment right, respectively. Issuance costs related to this transaction were approximately $0.3 million.

The shares of Series 10 Preferred Stock accrued annual dividends at the rate of 10% from the date of issuance, payable in the form of additional shares of Series 10 Preferred Stock. The shares of Series 10 Preferred

Stock were redeemable by the Company at any time after issuance, either in cash or by offset against Recourse Notes, which were issued by the Investor to the Company in connection with the exercise of the warrants and the additional investment right as discussed below.

Each warrant had an initial exercise price of $10.11 per share of our common stock. The warrants were exercisable immediately and had an expiration date in February 2013. The holder of the warrants had the option to pay the exercise price for the warrant either in cash or through the issuance of Recourse Notes to the Company. The Investor exercised all of the warrants to purchase 0.9 million shares of our common stock for a total of $8.7 million through the issuance of Recourse Notes by the Investor to the Company.

Each additional investment right had an exercise price of $1,000 per share of Series 11 Preferred Stock. The additional investment right was exercisable immediately upon issuance and had an expiration date in March 2011. The holder of the additional investment right had the option to pay the exercise price in cash or through issuance of Recourse Notes to the Company. The Investor exercised the entire additional investment right to purchase 24,957 shares of Series 11 Preferred Stock for a total of approximately $25.0 million through the issuance of Recourse Notes by the Investor to the Company. The Investor also elected to convert all 24,957 shares of Series 11 Preferred Stock into 2.5 million shares of our common stock at a conversion price of $10.11 per share.

In March 2011, we redeemed all 24,957 outstanding shares of Series 10 Preferred Stock (plus accrued dividends). Each share of Series 10 Preferred Stock (plus accrued dividends) was offset by $1,350 principal amount of Recourse Notes (plus accrued interest), regardless of the issuance date of the shares of Series 10 Preferred Stock and Recourse Notes. We recognized $0.1 million in accrued dividends on the Series 10 Preferred Stock and $41,000 accrued interest on the Recourse Notes through the redemption date, both of which are included individends and deemed dividends on preferred stock for the year ended December 31, 2011.Additionally, we recognized $15.4 million individends and deemed dividends on preferred stockfor the year ended December 31, 2011 upon redemption of the Series 10 Preferred Stock equal to the difference between the $33.7 million principal balance of Recourse Notes, including accrued interest, and $18.3 million carrying amount of Series 10 Preferred Stock, including accrued dividends.

Series 12 Convertible Preferred Stock

In May 2011, we issued 15,972 shares of our Series 12 convertible preferred stock, or Series 12 Preferred Stock, and warrants to purchase up to 0.6 million shares of our common stock for gross proceeds of $16.0 million. Issuance costs related to this transaction were $1.2 million, including the fair value of the placement agent warrants discussed below. Each warrant has an exercise price of $12.00 per share of our common stock and expires in May 2016. We estimated the $4.1 million fair value of the warrants using the Black-Scholes pricing model. For the year ended December 31, 2011, we recognized $5.5 million individends and deemed dividends on preferred stockrelated to the beneficial conversion feature on our Series 12 Preferred Stock. In May 2011, all 15,972 shares of our Series 12 Preferred Stock were converted into 1.5 million shares of our common stock at a conversion price of $10.50 per share. As of December 31, 2012,2013, warrants to purchase 0.6 million shares of our common stock remained outstanding.

In connection with this offering, we also issued warrants to purchase up to 30,423 shares of our common stock to the placement agent, which were estimated to have a fair value of $0.2 million using the Black-Scholes pricing model. These warrants have an exercise price of $13.125 per share and expire in May 2016. As of December 31, 2012,2013, warrants to purchase up to 30,423 shares of our common stock issued to the placement agent remained outstanding.

Series 13 Convertible Preferred Stock

In July 2011, we issued 30,000 shares of our Series 13 convertible preferred stock, or Series 13 Preferred Stock, and warrants to purchase up to 1.8 million shares of our common stock for gross proceeds of $30.0

million. Issuance costs related to this transaction were $2.5 million, including the fair value of the warrants issued to the placement agent and financial advisor discussed below. Each warrant has an exercise price of $10.75 per share of our common stock, was exercisable beginning six months and one day from the date of issuance and expires in July 2016. We estimated the $8.4 million fair value of the warrants using the Black-Scholes pricing model. For the year ended December 31, 2011, we recognized $13.0 million individends and deemed dividends on preferred stock related to the beneficial conversion feature on our Series 13 Preferred Stock. In July 2011, all 30,000 shares of our Series 13 Preferred Stock were converted into 3.5 million shares of our common stock at a conversion price of $8.50 per share. As of December 31, 2012,2013, warrants to purchase up to 1.8 million shares of our common stock remained outstanding.

In connection with this offering, we also issued warrants to purchase up to 70,588 shares of our common stock to the placement agent, which were estimated to have a fair value of $0.3 million using the Black-Scholes pricing model, and warrants to purchase up to 35,294 shares of our common stock to the financial advisor as partial compensation for its services in connection with this offering, which were estimated to have a fair value of $0.2 million using the Black-Scholes pricing model. These warrants have an exercise price of $12.25 per share, are exercisable beginning six months and one day from the date of issuance and expire in July 2016. As of December 31, 2012,2013, warrants to purchase up to 70,588 and 35,294 shares of our common stock issued to the placement agent and financial advisor, respectively, remained outstanding.

Series 14 Convertible Preferred Stock

In December 2011, we issued 20,000 shares of our Series 14 convertible preferred stock, or Series 14 Preferred Stock, and warrants to purchase up to 1.4 million shares of our common stock for gross proceeds of $20.0 million. Issuance costs related to this transaction were $1.6 million, including the fair value of warrants issued to the placement agent and financial advisor discussed below. Each warrant has an exercise price of $7.25 per share of our common stock, was exercisable beginning six months and one day from the date of issuance and expires in December 2016. We estimated the $4.9 million fair value of the warrants using the Black-Scholes pricing model. For the year ended December 31, 2011, we recognized $8.9 million individends and deemed dividends on preferred stock related to the beneficial conversion feature on our Series 14 Preferred Stock. In December 2011, 10,000 shares of Series 14 Preferred Stock were converted into 1.7 million shares of our common stock at a conversion price of $5.75 per share. In January 2012, the remaining 10,000 shares of Series 14 Preferred Stock automatically converted into 1.7 million shares of our common stock at a conversion price of $5.75 per share pursuant to the terms of the Series 14 Preferred Stock. As of December 31, 2012,2013, warrants to purchase up to 1.4 million shares of our common stock remained outstanding.

In connection with this offering, we also issued warrants to purchase up to 69,566 shares of our common stock to the placement agent, which were estimated to have a fair value of $0.2 million using the Black-Scholes pricing model, and warrants to purchase up to 34,783 shares of our common stock to the financial advisor as partial compensation for its services in connection with this offering, which were estimated to have a fair value of $0.1 million using the Black-Scholes pricing model. These warrants have an exercise price of $8.625 per share, were exercisable beginning six months and one day from the date of issuance and expire in December 2016. As of December 31, 2012,2013, warrants to purchase up to 69,566 and 34,783 shares of our common stock issued to the placement agent and financial advisor, respectively, remained outstanding.

Series 15-1 Preferred Stock

In May 2012, we issued 20,000 shares of our Series 15 convertible preferred stock, or Series 15-1 Preferred Stock, and a warrant to purchase up to 2.7 million shares of our common stock, or Series 15-1 Warrant, for gross proceeds of $20.0 million. Issuance costs related to this transaction were $1.3 million.

Each share of our Series 15-1 Preferred Stock was convertible at the option of the holder and was entitled to a liquidation preference equal to the initial stated value of $1,000 per share of Series 15-1 Preferred Stock, plus

any accrued and unpaid dividends before the holders of our common stock or any other junior securities receive any payments upon such liquidation. The Series 15-1 Preferred Stock was not entitled to dividends except to share in any dividends actually paid on our common stock or anypari passu or junior securities and had no voting rights except as otherwise expressly provided in our amended and restated articles of incorporation or as otherwise required by law. For the year ended December 31, 2012, we recognized $8.5 million individends and deemed dividends on preferred stockrelated to the beneficial conversion feature on our Series 15-1 Preferred Stock. In May 2012, all 20,000 shares of our Series 15-1 Preferred Stock were converted into 4.0 million shares of our common stock at a conversion price of $5.00 per share.

The Series 15-1 Warrant had an exercise price of $5.46 per share of our common stock and had an expiration date in May 2017. The Series 15-1 Warrant contained a provision that if the price per share of our common stock was less than the exercise price of the warrant at any time while the warrant is outstanding, the warrant may be exchanged for shares of our common stock based on an exchange value derived from a specified Black-Scholes value formula, or the Exchange Value, subject to certain limitations. Upon issuance, we estimated the fair value of the Series 15-1 Warrant to be approximately $10.3 million using the Black-Scholes pricing model. In September 2012, the holder elected to exchange a portion of the Series 15-1 Warrant to purchase 1.3 million shares with an Exchange Value of $5.0 million. We elected to issue 2.8 million shares of our common stock as payment for the Exchange Value. In November 2012, the holder elected to exchange the remaining portion of the Series 15-1 Warrant to purchase 1.4 million shares of our common stock with an Exchange Value of $5.4 million. We elected to issue 4.1 million shares of our common stock as payment for the Exchange Value.

Series 15-2 Preferred Stock

In July 2012, we issued 15,000 shares of our Series 15 convertible preferred stock, or Series 15-2 Preferred Stock, and a warrant to purchase up to 3.4 million shares of our common stock, or Series 15-2 Warrant, for gross proceeds of $15.0 million. Issuance costs related to this transaction were $0.8 million.

Each share of our Series 15-2 Preferred Stock was convertible at the option of the holder and was entitled to a liquidation preference equal to the initial stated value of $1,000 per share of Series 15-2 Preferred Stock, plus any accrued and unpaid dividends before the holders of our common stock or any other junior securities receive any payments upon such liquidation. The Series 15-2 Preferred Stock was not entitled to dividends except to share in any dividends actually paid on our common stock or anypari passu or junior securities and had no voting rights except as otherwise expressly provided in our amended and restated articles of incorporation or as otherwise required by law. In July 2012, all 15,000 shares of Series 15-2 Preferred Stock were converted into 5.0 million shares of our common stock at a conversion price of $2.97475 per share. For the year ended December 31, 2012, we recognized $5.0 million individends and deemed dividends on preferred stockrelated to the beneficial conversion feature on our Series 15-2 Preferred Stock.

The Series 15-2 Warrant had substantially the same features as the Series 15-1 Warrant described above, with the exception of the exercise price of $3.0672 per share of common stock and expiration date of July 2017. Upon issuance, we estimated the fair value of the Series 15-2 Warrant to be approximately $7.2 million using the Black-Scholes pricing model. In September 2012, the holder elected to exchange the Series 15-2 Warrant to purchase 3.4 million shares of our common stock with an Exchange Value of $7.4 million. We elected to issue 2.9 million shares of common stock to the holder as payment for the Exchange Value of the Series 15-2 Warrant.

Series 17 Preferred Stock

In October 2012, we issued 60,000 shares of our Series 17 convertible preferred stock, or Series 17 Preferred Stock, in an underwritten public offering for gross proceeds of $60.0 million, before deducting underwriting commissions and discounts and other offering costs. Issuance costs related to this transaction were $5.5 million, including $3.9 million in underwriting commissions and discounts.

Each share of Series 17 Preferred Stock was convertible at the option of the holder and was entitled to a liquidation preference equal to the stated value of $1,000 per share plus any accrued and unpaid dividends before the holders of our common stock or any other junior securities receive any payments upon such liquidation. The holders of Series 17 Preferred Stock were not entitled to receive dividends except to share in any dividends actually paid on shares of our common stock or other junior securities and had no voting rights except as otherwise expressly provided in our amended and restated articles of incorporation or as otherwise required by law. For the year ended December 31, 2012, we recognized $0.4 million individends and deemed dividends on preferred stockrelated to the beneficial conversion feature on our Series 17 Preferred Stock and all 60,000 shares of Series 17 Preferred Stock were converted into 42.9 million shares of our common stock at a conversion price of $1.40 per share.

Series 18 Preferred Stock

In September 2013, we issued 15,000 shares of Series 18 preferred stock, or Series 18 Preferred Stock, for gross proceeds of $15.0 million in a registered direct offering. Issuance costs related to this transaction were $0.1 million. Each share of Series 18 Preferred Stock was entitled to a liquidation preference equal to the initial stated value of $1,000 per share of Series 18 Preferred Stock, plus any accrued and unpaid dividends, before the holders of our common stock or any other junior securities receive any payments upon such liquidation. The Series 18 Preferred Stock was not entitled to dividends except to share in any dividends actually paid on common stock or any pari passu or junior securities. The Series 18 Preferred Stock had no voting rights except as otherwise expressly provided in the amended articles or as otherwise required by law. For the year ended December 31, 2013, we recognized $6.9 million individends and deemed dividends on preferred stock related to the beneficial conversion feature on our Series 18 Preferred Stock. In September 2013, all 15,000 shares of Series 18 preferred stock were converted into 15.0 million shares of common stock at a conversion price of $1.00 per share.

Series 19 Preferred Stock

See Note 14,Collaboration, Licensing and Milestone Agreements—Baxter, for information concerning our issuance of Series 19 Preferred Stock.

 

10.12.Common Stock

Common Stock Reserved

A summary of common stock reserved for issuance is as follows as of December 31, 20122013 (in thousands):

 

Equity incentive plans

   3,30110,094  

Common stock purchase warrants

   7,0187,697  

Employee stock purchase plan

   4238  
  

 

 

 
   10,36117,829  
  

 

 

 

Warrants

Warrants to purchase up to 0.1 million shares of our common stock, issued in connection with the issuance of our Series 1 Preferred Stock in April 2009, or Class B Warrants, were outstanding as of December 31, 2012.2013. The Class B Warrants have an exercise of $12.30 per share of common stock and expire in October 2014. We classified the Class B Warrants as mezzanine equity as they include a redemption feature that may be triggered upon certain fundamental transactions that are outside of our control.

Warrants to purchase up to 5,000 shares of common stock, issued to the placement agent in connection with our Series 1 Preferred Stock financing in April 2009, were outstanding as of December 31, 2012.2013. These warrants have an exercise price of $13.50 per share and expire in October 2014. These warrants are classified as mezzanine equity due to the same redemption feature of the Class B warrants as described above.

Warrants to purchase up to 0.2 million shares of our common stock, issued in connection with our registered offering of common stock in May 2009, were outstanding as of December 31, 2012.2013. These warrants have an exercise price of $42.00 per share and expire in May 2014.

Warrants to purchase up to 10,667 shares of our common stock, issued to the placement agent in connection with the registered offering of common stock in May 2009, were outstanding as of December 31, 2012.2013. These warrants have an exercise price of $46.875 per share and expire in November 2014.

Warrants to purchase up to 19,556 shares of our common stock, issued to the underwriter of our public offering of common stock in July 2009, were outstanding as of December 31, 2012.2013. These warrants have an exercise price of $51.00 per share and expire in April 2014.

See Note 10,Long-term Debt, and Note 11,Preferred Stock, for additional information concerning our warrants.

11.13.Other Comprehensive Loss

Total accumulated other comprehensive loss consisted of the following (in thousands):

 

   Net Unrealized
Loss on  Securities
Available-For-Sale
  Foreign
Currency
Translation
Adjustments
  Accumulated
Other
Comprehensive
Loss
 

December 31, 2011

  $(165 $(7,870 $(8,035

Current period other comprehensive loss

   (70  (168  (238
  

 

 

  

 

 

  

 

 

 

December 31, 2012

  $(235 $(8,038 $(8,273
  

 

 

  

 

 

  

 

 

 
   Net Unrealized
Loss on Securities
Available-For-Sale
  Foreign
Currency
Translation
Adjustments
  Accumulated
Other
Comprehensive
Loss
 

December 31, 2012

  $(235 $(8,038 $(8,273

Current period other comprehensive gain (loss)

   (187  31    (156
  

 

 

  

 

 

  

 

 

 

December 31, 2013

  $(422 $(8,007 $(8,429
  

 

 

  

 

 

  

 

 

 

 

12.14.Collaboration, Licensing and Milestone Agreements

Chroma Therapeutics, Ltd.Baxter

In November 2013, we entered into a Development, Commercialization and License agreement (the “Agreement”) with Baxter International Inc., Baxter Healthcare Corporation and Baxter Healthcare SA (collectively, “Baxter”) for the development and commercialization of pacritinib (the “Compound”) for use in oncology and potentially additional therapeutic areas. Under the Agreement, we granted to Baxter an exclusive, worldwide (subject to our certain co-promotion rights in the U.S.), royalty-bearing, non-transferable, and (under certain circumstances outside of the U.S.) sub-licensable license to its know-how and patents relating to the Compound. We received an upfront payment of $60.0 million upon execution of the Agreement, which included an equity investment of $30 million to acquire our Series 19 Preferred Stock as discussed below.

Under the Agreement, we may receive potential clinical, regulatory and commercial launch milestone payments of up to $112.0 million and potential additional sales-based milestone payments of up to $190.0 million. We have determined that all of the sales-based milestone payments are contingent consideration and will be accounted for as revenue in the period in which the respective revenue recognition criteria are met. We have also determined that all of the clinical, regulatory and commercial launch milestones are substantive and will be recognized as revenue upon the achievement of the milestone, assuming all other revenue recognition criteria are met.

Under the Agreement, the Company and Baxter will jointly commercialize and share profits and losses on sales of the Compound in the U.S. Outside the U.S., the Company is also eligible to receive tiered high single digit to mid-teen percentage royalties based on net sales for myelofibrosis, and higher double-digit royalties for other indications, subject to reduction by up to 50% if (i) Baxter is required to obtain additional third party licenses, on which it is obligated to pay royalties, to fulfill its obligations under the Agreement, and (ii) in any jurisdiction where there is no longer either regulatory exclusivity or patent protection.

Under the Agreement, the Company is responsible for all development costs incurred prior to January 1, 2014 as well as approximately up to $96.0 million on or after January 1, 2014 for U.S. and E.U. development costs, subject to potential upward or downward adjustment in certain circumstances. All development costs exceeding such threshold will generally be shared as follows: (i) costs generally applicable worldwide will be shared 75% to Baxter and 25% to the Company, (ii) costs applicable to territories exclusive to Baxter will be 100% borne by Baxter and (iii) costs applicable exclusively to co-promotion in the U.S. will be shared equally between the parties, subject to certain exceptions.

We entered into an agreement with Chroma Therapeutics, Ltd., or Chroma, orrecord the Chroma License Agreement,development cost reimbursements received from Baxter aslicense and contract revenue in March 2011the statements of operations, and we record the full amount of development costs as research and development expense.

Pursuant to the accounting guidance under whichASC 605-25Revenue Recognition – Multiple-Element Arrangements, we have an exclusivedetermined that the following non-contingent deliverables under the Agreement meet the criteria for separation and are therefore treated as separate units of accounting:

a license to certain technology and intellectual property controlled by Chromafrom the Company to develop and commercialize the drug candidate, tosedostat,Compound worldwide (subject to certain co-promotion rights of the Company in North, Centralthe U.S.); and South America,

development services provided by the Company related to jointly agreed-upon development activities with cost sharing as discussed above.

Both of the above non-contingent deliverables have no general right of return and are determined to have standalone values.

The Agreement also requires Baxter and the Company to negotiate and enter into a Manufacturing and Supply Agreement, which will provide for the manufacture of the licensed products, with an option for Baxter to finish and package encapsulated bulk product, within 180 days of the Agreement. The Manufacturing and Supply Agreement is not considered as a deliverable at the inception of the arrangement because the critical terms such as pricing and quantities are not defined and delivery of the services will be dependent on successful clinical results that are uncertain.

Also under the Agreement, joint commercialization, manufacturing, development and steering committees with representatives from the Company and Baxter will be established. We have considered whether our participation on the joint development committees may be a separate deliverable and determined that it does not represent a separate unit of accounting as the committee’s activities are primarily related to governance and oversight of development activities and are therefore combined with the development services. Our participation on the joint commercialization and manufacturing committees is also determined to be a non-deliverable.

We have also considered whether our regulatory roles under the Agreement constitute a separate deliverable and determined that it should also be combined with the development services.

The Agreement will expire when there is no longer any obligation for Baxter to pay royalties to us in any jurisdiction, at which time the licenses granted to Baxter will become perpetual and royalty-free. Either party may terminate the Agreement prior to expiration in certain circumstances. The Company may terminate the Agreement if Baxter has not undertaken requisite regulatory or commercialization efforts in the applicable countries and certain other conditions are met. Baxter may terminate the Agreement prior to expiration in certain

circumstances including (i) in the event development costs for myelofibrosis for the period commencing January 1, 2014 are reasonably projected to exceed a specified threshold, (ii) as to some or all countries in the event of commercial failure of the licensed product or (iii) without cause following the one-year anniversary of the Agreement date, provided that such termination will have a lead-in period of six months before it becomes effective. Additionally, either party may terminate the Agreement in events of force majeure, or the Licensed Territory.other party’s uncured material breach or insolvency. In the event of a termination prior to the expiration date, rights in the Compound will revert to the Company.

We allocated the fixed and determinable Agreement consideration of $30 million based on the percentage of the relative selling price of each unit of accounting. We estimated the selling price of the license using the income approach which values the license by discounting direct cash flow expected to be generated over the remaining life of the license, net of cash flow adjustments related to working capital. We estimated the selling price of the development services by discounting the estimated development expenditures to the date of arrangement which include internal estimates of personnel needed to perform the development services as well as third party costs for services and supplies. Of the $30 million Agreement consideration, $27.3 million was allocated to the license and $2.7 million was allocated to the development services.

Because delivery of the license occurred upon the execution of the Agreement in November 2013 and the remaining revenue recognition criteria were met, all $27.3 million of the allocated arrangement consideration related to the license was recognized as revenue during the year ended December 31, 2013.

The allocated amount of $2.7 million to the development services is expected to be recognized as development service revenue through approximately 2018, with majority of development services expected to be completed through approximately 2015, based on a proportional performance method, by which revenue is recognized in proportion to the development costs incurred. During the year ended December 31, 2013, $0.1 million was recognized as revenue, and the remaining $2.6 million was recorded as deferred revenue in the balance sheet as of December 31, 2013.

License and contract revenue recognized in the statement of operations related to the Agreement were as follows (in thousands):

   Years ended December 31, 
   2013   2012   2011 

License

  $27,275   $—     $—   

Development services

   89    —      —   
  

 

 

   

 

 

   

 

 

 

License and contract revenue

  $27,364   $—     $—   
  

 

 

   

 

 

   

 

 

 

As of December 31, 2013, deferred revenue amounts related to the Agreement consisted of (in thousands):

   December 31, 
   2013   2012 

Current portion of deferred revenue

  $1,010   $—   

Deferred revenue, less current portion

   1,626    —   
  

 

 

   

 

 

 

Total deferred revenue

  $2,636   $—   
  

 

 

   

 

 

 

Concurrently with the execution of the Agreement, we issued 30,000 shares of Series 19 convertible preferred stock, no par value, or Series 19 Preferred Stock to Baxter for $30.0 million. Issuance costs related to this transaction were $0.2 million. Each share of Series 19 Preferred Stock was convertible at the option of the holder and was entitled to a liquidation preference equal to the stated value of $1,000 per share plus any accrued and unpaid dividends before the holders of our common stock or any other junior securities receive any payments upon such liquidation. The holder of Series 19 Preferred Stock was not entitled to receive dividends except to share in any dividends actually paid on shares of our common stock or other junior securities and had no voting rights except as otherwise expressly provided in our amended and restated articles of incorporation or as

otherwise required by law. For the year ended December 31, 2013, all 30,000 shares of Series 19 Preferred Stock were converted into 15,673,981 shares of our common stock at a conversion price of $1.914 per share. There was no beneficial conversion feature on Series 19 Preferred Stock.

Novartis

In January 2014, we entered into a Termination Agreement, or the Termination Agreement, with Novartis International Pharmaceutical Ltd., or Novartis, to reacquire the rights to PIXUVRI and Opaxio, or collectively, the Compounds, previously granted to Novartis under our License and Co-Development Agreement with Novartis entered into in September 2006, as amended, or the Original Agreement. Pursuant to the Termination Agreement, the Original Agreement was terminated in its entirety, other than certain customary provisions, including those pertaining to confidentiality and indemnification, which survive termination.

Under the Termination Agreement, we agreed not to transfer, license, sublicense or otherwise grant rights with respect to intellectual property of the Compounds unless the transferee/licensee/sublicensee agrees to be bound by the terms of the Chroma License Agreement, we paid Chroma an upfront fee of $5.0 million upon execution ofTermination Agreement. We also agreed to provide potential payments to Novartis, including a percentage ranging from the agreement.Research and development expense attributablelow double-digits to the Chroma License Agreement was $2.8 million and $7.0 million formid-teens, of any consideration received by us or our affiliates in connection with any transfer, license, sublicense or other grant of rights with respect to intellectual property of PIXUVRI or Opaxio, respectively; provided that such payments will not exceed certain prescribed ceilings in the years 2012 and 2011, respectively,low-single digit millions. Novartis is entitled to receive potential payments of which $0.2 million and $1.0 million was included inaccrued expenses as of December 31, 2012 and 2011, respectively. We will make a milestone payment of $5.0up to $16.6 million upon the initiationsuccessful achievement of certain sales milestones of the Compounds. Novartis is also eligible to receive tiered low single-digit percentage royalty payments for the first pivotal trial. The Chroma License Agreement also includes additional development-several hundred million in annual net sales, and sales-based milestoneten percent royalty payments relatedthereafter based on annual net sales of each Compound, subject to acute myeloid leukemia,reduction in the event generic drugs are introduced and sold by a third party, causing the sale of PIXUVRI or AML, and certain other indications, upOpaxio to fall by a maximum amount of $209.0 million payable by us to Chroma if all development and sales milestones are achieved.

Underpercentage in the Chroma License Agreement,high double-digits. To the extent we are also required to pay Chroma royalties on net sales of tosedostat in any country withinOpaxio pursuant to the Licensed Territory, commencing on the first commercial salelicense agreement between us and PG-TXL Company, L.P., dated as of tosedostat in any country in the Licensed Territory and continuing with respect to that country until the later of (a) the expiration date of the last patent claim covering tosedostat in that country, (b) the expiration of all regulatory exclusivity periods for tosedostat in that country or (c) ten years after the first commercial sale in that country. Royalty payments to Chroma are based on net sales volumes in any country within the Licensed Territory and range from the low- to mid-teensNovember 13, 1998, as amended, we may credit a percentage of net sales.

Under the Chroma License Agreement, we are also requiredamount of such royalties paid to oversee and be responsible for performing the development operations and commercialization activities in the Licensed Territory and Chroma will oversee and be responsible for performing the development operations and commercialization activities worldwide except for the Licensed Territory, or the ROW Territory. Development costs may not exceed $50.0 million for the first three years of the Chroma License Agreement unless agreed by the parties and we will be responsible for 75% of all development costs, while Chroma will be responsible for 25% of all development costs,those payable to Novartis, subject to certain exceptions. Chroma is responsibleNotwithstanding the foregoing, royalty payments for the manufacturing of tosedostat for development purposesboth PIXUVRI and Opaxio are subject to certain minimum floor percentages in the Licensed Territory and the ROW Territory in accordance with the terms of the manufacturing and supply agreement that we entered into with Chroma for our drug candidate tosedostat, which commenced on June 8, 2011.

We have the option of obtaining a commercial supply of tosedostat from Chroma or from another manufacturer at our sole discretion in the Licensed Territory. The Chroma License Agreement may be terminated by us at our convenience upon 120 days’ written notice to Chroma. The Chroma License Agreement may also be terminated by either party following a material breach by the other party subject to notice and cure periods.

By a letter dated July 18, 2012 Chroma notified us that Chroma alleges breaches under the Chroma License Agreement. Chroma asserts that we have not complied with the Chroma License Agreement because we made decisions with respect to the development of tosedostat without the approval of the joint committees to be established pursuant to the terms of the Chroma License Agreement, did not hold meetings of those committees and have not used diligent efforts in the development of tosedostat. We dispute Chroma’s allegations and intend to vigorously defend our development activities and judgments. In particular, we dispute Chroma’s lack of diligence claim based in part on the appropriateness of completing the ongoing Phase 2 combination trials prior to developing a Phase 3 trial design. In addition, we believe that Chroma has failed to comply with its antecedent obligations with respect to the joint committees and failed to demonstrate an ability to manufacture tosedostat to the required standards under the terms of the Chroma License Agreement. Under the Chroma License Agreement there is a 90 day cure period for any nonpayment default, which period shall be extended to 180 days if the party is using efforts to cure. A party may terminate the Chroma License Agreement for a material breach only after arbitration in accordance with the terms of the Chroma License Agreement.

Effective September 25, 2012, we and Chroma entered into a three month standstill with respect to the parties’ respective claims under the Chroma License Agreement, but otherwise reserving the parties’ respective rights as of the commencement of the standstill period. Effective December 25, 2012, the standstill was subsequently extended until March 25, 2013 and is terminable by either party on one month’s notice.

S*BIO Pte Ltd

See Note 4,Acquisitions,for further information regarding contingent milestone payments related to the asset purchase agreement with S*BIO.low single-digits.

University of Vermont

We entered into an agreement with the University of Vermont, or UVM Agreement, in March 1995, as amended in March 2000, which grants us an exclusive license, with the right to sublicense, for the rights to PIXUVRI, or the UVM Agreement. Pursuant to the UVM Agreement, we acquired the rights to make, have made, sell and use PIXUVRI. Pursuant to the UVM Agreement, we are obligated to make payments to UVM based on net sales. Our royalty payments range from low-single digits to mid-single digits as a percentage of net sales. The higher royalty rate is payable for net sales in countries where specified UVM licensed patents exist, or where we have obtained orphan drug protection, until such UVM patents or such protection no longer exists. For a period of ten years after first commercialization of PIXUVRI, the lower royalty rate is payable for net sales in such countries after expiration of the designated UVM patents or loss of orphan drug protection, and in all other countries without such specified UVM patents or orphan drug protection. Unless otherwise terminated, the term of the UVM Agreement continues for the life of the licensed patents in those countries in which a licensed patent exists, and continues for ten years after the first sale of PIXUVRI in those countries where no such patents exist. We may terminate the UVM Agreement, on a country-by-country basis or on a patent-by-patent basis, at any time upon advance written notice. UVM may terminate the UVM Agreement upon advance written notice in the event royalty payments are not made. In addition, either party may terminate the UVM Agreement (a) in the event of an uncured material breach of the UVM Agreement by the other party; or (b) in the event of bankruptcy of the other party.

S*BIO Pte Ltd

See Note 5,Acquisitions,for further information regarding the asset purchase agreement with S*BIO.

Chroma Therapeutics, Ltd.

We entered into an agreement with Chroma Therapeutics, Ltd., or Chroma, or the Chroma License Agreement, in March 2011 under which we have an exclusive license to certain technology and intellectual property controlled by Chroma to develop and commercialize the drug candidate, tosedostat, in North, Central and South America, or the Licensed Territory. Pursuant to the terms of the Chroma License Agreement, we paid Chroma an upfront fee of $5.0 million upon execution of the agreement.Research and development expense attributable to the Chroma License Agreement was $1.0 million, $2.8 million and $7.0 million for the years 2013, 2012 and 2011, respectively, of which $0.1 million and $0.2 million was included inaccrued expenses as of December 31, 2013 and 2012, respectively. We will make a milestone payment of $5.0 million upon the initiation of the first pivotal trial. The Chroma License Agreement also includes additional development- and sales-based milestone payments related to acute myeloid leukemia, or AML, and certain other indications, up to a maximum amount of $209.0 million payable by us to Chroma if all development and sales milestones are achieved.

Under the Chroma License Agreement, we are also required to pay Chroma royalties on net sales of tosedostat in any country within the Licensed Territory, commencing on the first commercial sale of tosedostat in any country in the Licensed Territory and continuing with respect to that country until the later of (a) the expiration date of the last patent claim covering tosedostat in that country, (b) the expiration of all regulatory exclusivity periods for tosedostat in that country or (c) ten years after the first commercial sale in that country. Royalty payments to Chroma are based on net sales volumes in any country within the Licensed Territory and range from the low- to mid-teens as a percentage of net sales.

Under the Chroma License Agreement, we are also required to oversee and be responsible for performing the development operations and commercialization activities in the Licensed Territory and Chroma will oversee and be responsible for performing the development operations and commercialization activities worldwide except for the Licensed Territory. Development costs may not exceed $50.0 million for the first three years of the Chroma License Agreement unless agreed by the parties and we will be responsible for 75% of all development costs, while Chroma will be responsible for 25% of all development costs, subject to certain exceptions. Chroma is responsible for the manufacturing of tosedostat for development purposes in accordance with the terms of the manufacturing and supply agreement that we entered into with Chroma for our drug candidate tosedostat, which commenced on June 8, 2011.

We have the option of obtaining a commercial supply of tosedostat from Chroma or from another manufacturer at our sole discretion in the Licensed Territory. The Chroma License Agreement may be terminated by us at our convenience upon 120 days’ written notice to Chroma. The Chroma License Agreement may also be terminated by either party following a material breach by the other party subject to notice and cure periods.

By a letter dated July 18, 2012 Chroma notified us that Chroma alleges breaches under the Chroma License Agreement. Chroma asserts that we have not complied with the Chroma License Agreement because we made decisions with respect to the development of tosedostat without the approval of the joint committees to be established pursuant to the terms of the Chroma License Agreement, did not hold meetings of those committees and have not used diligent efforts in the development of tosedostat. We dispute Chroma’s allegations and intend to vigorously defend our development activities and judgments. In particular, we dispute Chroma’s lack of diligence claim based in part on the appropriateness of completing the ongoing Phase 2 combination trials prior to developing a Phase 3 trial design. In addition, we believe that Chroma has failed to comply with its antecedent obligations with respect to the joint committees and failed to demonstrate an ability to manufacture tosedostat to the required standards under the terms of the Chroma License Agreement. Under the Chroma License Agreement there is a 90 day cure period for any nonpayment default, which period shall be extended to 180 days if the party is using efforts to cure. A party may terminate the Chroma License Agreement for a material breach only after arbitration in accordance with the terms of the Chroma License Agreement.

Effective September 25, 2012, we and Chroma entered into a standstill with respect to the parties’ respective claims under the Chroma License Agreement, but otherwise reserving the parties’ respective rights as of the commencement of the standstill period. The standstill was extended through June 25, 2013, but has not been renewed by the parties.

Gynecologic Oncology Group

We entered into an agreement with the Gynecologic Oncology Group, or GOG, in March 2004, as amended in August 2008 and August 2013, related to the GOG-0212 trial of Opaxio in patients with ovarian cancer, which the GOG is conducting. We recorded a $0.9 million payment due to the GOG based on the 1,100 patient enrollment milestone achieved in the third quarter of 2013, which is included inaccounts payable as of December 31, 2013. In addition, we may be required to pay up to $1.2 million upon the attainment of certain milestones, as well as other fees under certain circumstances, of which $0.7 million is included inaccrued expenses as of December 31, 2013. In January 2014, we were informed by the GOG that enrollment in the trial had been completed, with 1,150 patients enrolled.

PG-TXL

In November 1998, we entered into an agreement with PG-TXL Company, L.P., or PG-TXL, as amended in February 2006, which grants us an exclusive worldwide license for the rights to Opaxio and to all potential uses of PG-TXL’s polymer technology, or the PG-TXL Agreement. Pursuant to the PG-TXL Agreement, we acquired the rights to research, develop, manufacture, market and sell anti-cancer drugs developed using this polymer technology. Pursuant to the PG-TXL Agreement, we are obligated to make payments to PG-TXL upon the achievement of certain development and regulatory milestones of up to $14.4 million. The timing of the

remaining milestone payments under the PG-TXL Agreement is based on trial commencements and completions for compounds protected by PG-TXL license rights, and regulatory and marketing approval of those compounds by the FDA and the EMA. Additionally, we are required to make royalty payments to PG-TXL based on net sales. Our royalty payments range from low-single digits to mid-single digits as a percentage of net sales. Unless otherwise terminated, the term of the PG-TXL Agreement continues until no royalties are payable to PG-TXL. We may terminate the PG-TXL Agreement (i) upon advance written notice to PG-TXL in the event issues regarding the safety of the products licensed pursuant to the PG-TXL Agreement arise during development or clinical data obtained reveal a materially adverse tolerability profile for the licensed product in humans or (ii) for any reason upon advance written notice. In addition, either party may terminate the PG-TXL Agreement (a) upon advance written notice in the event certain license fee payments are not made; (b) in the event of an uncured material breach of the respective material obligations and conditions of the PG-TXL Agreement; or (c) in the event of liquidation or bankruptcy of a party.

Gynecologic Oncology Group

We entered into an agreement with the GOG, or the GOG Agreement, in March 2004, as amended on August 2008, related to the GOG-0212 trial of Opaxio in patients with ovarian cancer, which the GOG is conducting. We recorded a $1.7 million payment due to the GOG based on the 800 patient enrollment milestone achieved in the second quarter of 2011, of which $0.4 million was outstanding and included inaccounts payable as of December 31, 2012. Under this agreement we are required to pay up to $1.8 million in additional milestone payments related to the trial, of which $0.5 million will become due upon receipt of the interim analysis and data transfer and $0.9 million will become due upon completion of the 1,100 patient enrollment milestone, both of which may occur in 2013.

Nerviano Medical Sciences

Under a license agreement entered into with Nerviano Medical Sciences, S.r.l. for brostallicin, we may be required to pay up to $80.0 million in milestone payments based on the achievement of certain product development results. Due to the early stage of development thatof brostallicin, is in, we are not able to determine whether the clinical trials will be successful and therefore cannot make a determination that the milestone payments are reasonably likely to occur at this time.

Cephalon

Pursuant to an acquisition agreement entered into with Cephalon, Inc., or Cephalon, in June 2005, we have the right to receive up to $100.0 million in payments upon achievement by Cephalon of specified sales and development milestones related to TRISENOX. However,In November 2013, we received $5.0 million from Teva Pharmaceutical Industries Ltd., or Teva, upon the achievement of any sucha worldwide net sales milestone of TRISENOX, which was included inlicense and contract revenue for the year ended December 31, 2013. TRISENOX was acquired from us by Cephalon. Cephalon was subsequently acquired by Teva. The achievement of the remaining milestones is uncertain at this time.

Novartis

In September 2006, we entered into an exclusive worldwide licensing agreement, or the Novartis Agreement, with Novartis International Pharmaceutical Ltd., or Novartis, for the development and commercialization of Opaxio. Total product and registration milestones to us for Opaxio under the Novartis Agreement could reach up to $270 million. Royalty payments to us for Opaxio are based on worldwide Opaxio net sales volumes and range from the low-twenties to mid-twenties as a percentage of net sales.

Pursuant to the Novartis Agreement, we are responsible for the development costs of Opaxio and have control over development of Opaxio unless and until Novartis exercises its development rights, or the Development Rights. In the event that Novartis exercises the Development Rights, then from and after the date of such exercise, or the Novartis Development Commencement Date, Novartis will be solely responsible for the development of Opaxio. Prior to the Novartis Development Commencement Date, we are solely responsible for

all costs associated with the development of Opaxio, but will be reimbursed by Novartis for certain costs after the Novartis Development Commencement Date. After the Novartis Development Commencement Date, Novartis will be responsible for costs associated with the development of Opaxio, subject to certain limitations; however, we are also responsible for reimbursing Novartis for certain costs pursuant to the Novartis Agreement.

The Novartis Agreement also provides Novartis with an option to develop and commercialize PIXUVRI based on agreed terms. If Novartis exercises its option on PIXUVRI under certain conditions and we are able to negotiate and sign a definitive license agreement with Novartis, Novartis would be required to pay us a $7.5 million license fee, up to $104 million in registration and sales related milestones and a royalty on PIXUVRI worldwide net sales. Royalty payments to us for PIXUVRI are based on worldwide PIXUVRI net sales volumes and range from the low-double digits to the low-thirties as a percentage of net sales.

Royalties for Opaxio and PIXUVRI are payable from the first commercial sale of a product until the later of the expiration of the last to expire valid claim of the licensor or the occurrence of other certain events, or the Royalty Term. Unless otherwise terminated, the term of the Novartis Agreement continues on a product-by-product and country-by-country basis until the expiration of the last-to-expire Royalty Term with respect to a product in such certain country. In the event Novartis does not exercise its Development Rights until the earlier to occur of (i) the expiration of 30 days following receipt by Novartis of the product approval information package pursuant to the Novartis Agreement or (ii) Novartis’ determination, in its sole discretion, to terminate the Development Rights exercise period by written notice to us (events (i) and (ii) collectively being referred to as the “Development Rights Exercise Period”), the Novartis Agreement will automatically terminate upon expiration of the Development Rights Exercise Period. In the event of an uncured material breach of the Novartis Agreement, the non-breaching party may terminate the Novartis Agreement. Either party may terminate the Novartis Agreement without notice upon the bankruptcy of the other party. In addition, Novartis may terminate the Novartis Agreement without cause at any time (a) in its entirety within 30 days written notice prior to the exercise by Novartis of its Development Rights or (b) on a product-by-product or country-by-country basis on 180 days written notice after the exercise by Novartis of its Development Rights. If we experience a change of control that involves certain major pharmaceutical companies, Novartis may terminate the Novartis Agreement by written notice within a certain period of time to us or our successor entity.

As of December 31, 2012, we have not received any milestone payments and we will not receive any milestone payments unless Novartis elects to exercise its option to participate in the development and commercialization of PIXUVRI or exercise its Development Rights for Opaxio.

Other Agreements

We have several agreements with contract research organizations, third party manufacturers, and distributors which have a duration greater than one year for the development and distribution of our products.

 

13.15.Share-Based Compensation

Share-Based Compensation Expense

Share-based compensation expense for all share-based payment awards made to employees and directors is measured based on the grant-date fair value estimated in accordance with generally accepted accounting principles. We recognized share-based compensation using the straight-line, single-award method based on the value of the portion of share-based payment awards that is ultimately expected to vest during the period. Share-based compensation is reduced for estimated forfeitures at the time of grant and revised, if necessary, in subsequent periods if actual forfeitures differ from those estimates. For performance-based awards that do not include market-based conditions, we record share-based compensation expense only when the performance-based milestone is deemed probable of achievement. We utilize both quantitative and qualitative criteria to judge whether milestones are probable of achievement. For awards with market-based performance conditions, we

recognize the grant-date fair value of the award over the derived service period regardless of whether the underlying performance condition is met.

For the years ended December 31, 2013, 2012 2011 and 2010,2011, we recognized share-based compensation expense due to the following types of awards (in thousands):

 

  2012   2011   2010   2013   2012   2011 

Performance rights

  $2,358    $    $13,954    $1,165    $2,358    $—    

Restricted stock

   5,180     4,850     2,908     5,906     5,180     4,850  

Options

   400     167     186     1,995     400     167  
  

 

   

 

   

 

   

 

   

 

   

 

 

Total share-based compensation expense

  $7,938    $5,017    $17,048    $9,066    $7,938    $5,017  
  

 

   

 

   

 

   

 

   

 

   

 

 

The following table summarizes share-based compensation expense for the years ended December 31, 2013, 2012 2011 and 2010,2011, which was allocated as follows (in thousands):

 

  2012   2011   2010   2013   2012   2011 

Research and development

  $1,730    $1,126    $2,765    $2,178    $1,730    $1,126  

Selling, general and administrative

   6,208     3,891     14,283     6,888     6,208     3,891  
  

 

   

 

   

 

   

 

   

 

   

 

 

Total share-based compensation expense

  $7,938    $5,017    $17,048    $9,066    $7,938    $5,017  
  

 

   

 

   

 

   

 

   

 

   

 

 

Share-based compensation had a $9.1 million, $7.9 million $5.0 million, and $17.0$5.0 million effect on our net loss attributable to common shareholders, which resulted in a $(0.14)$(0.08), $(0.15)$(0.14) and $(0.75)$(0.15) effect on basic and diluted net loss per common share for the years ended December 31, 2013, 2012 2011 and 2010,2011, respectively. It had no effect on cash flows from operations or financing activities for the periods presented; however, during the years ended 2013, 2012 2011 and 2010,2011, we repurchased 200,000, 23,000 44,000 and 52,00044,000 shares of our common stock totaling $0.2 million, $0.1 million $0.4 million and $0.9$0.4 million, respectively, for cash in connection with the vesting of employee restricted stock awards based on taxes owed by employees upon vesting of the awards.

As of December 31, 2012,2013, unrecognized compensation cost related to unvested stock options and time-based restricted stock awards amounted to $5.0$8.4 million, which will be recognized over the remaining weighted-average requisite service period of 1.61.1 years. The unrecognized compensation cost related to unvested options and restricted stock does not include the value of performance-based share awards.

For the years ended December 31, 2013, 2012 2011 and 2010,2011, no tax benefits were attributed to the share-based compensation expense because a valuation allowance was maintained for substantially all net deferred tax assets.

Stock Plan

Pursuant to our 2007 Equity Incentive Plan, as amended and restated in July 2012,April 2013, or the Plan, we may grant the following types of incentive awards: (1) stock options, including incentive stock options and non-qualified stock options, (2) stock appreciation rights, (3) restricted stock, (4) restricted stock units and (5) cash awards. The Plan is administered by the Compensation Committee of our boardBoard of directors,Directors, which has the discretion to determine the employees, consultants and directors who shall be granted incentive awards. Options expire 10 years from the date of grant, subject to the recipients continued service to the Company. As of December 31, 2012, 9.52013, 21.5 million shares were authorized for issuance, of which 3.05.6 million shares of common stock were available for future grants, under the Plan.

Stock Options

Fair value for employee stock options was estimated at the date of grant using the Black-Scholes pricing model, with the following weighted average assumptions:

 

  Year Ended December 31,   Year Ended December 31, 
  2012 2011 2010   2013 2012 2011 

Risk-free interest rate

   0.8  0.9  1.3   1.4  0.8  0.9

Expected dividend yield

   None    None    None     None    None    None  

Expected life (in years)

   4.7    4.5    5.0     5.3    4.7    4.5  

Volatility

   88  97  96   102  88  97

The risk-free interest rate used in the Black-Scholes valuation method is based on the implied yield currently available for U.S. Treasury securities at maturity with an equivalent term. We have not declared or paid any dividends on our common stock and do not currently expect to do so in the future. The expected term of options represents the period that our options are expected to be outstanding and was determined based on historical weighted average holding periods and projected holding periods for the remaining unexercised options. Consideration was given to the contractual terms of our options, vesting schedules and expectations of future employee behavior. Expected volatility is based on the annualized daily historical volatility, including consideration of the implied volatility and market prices of traded options for comparable entities within our industry.

Our stock price volatility and option lives involve management’s best estimates, both of which impact the fair value of options calculated under the Black-Scholes methodology and, ultimately, the expense that will be recognized over the life of the option. As we also recognize compensation expense for only the portion of options expected to vest, we apply estimated forfeiture rates that we derive from historical employee termination behavior. If the actual number of forfeitures differs from our estimates, additional adjustments to compensation expense may be required in future periods.

The following table summarizes stock option activity for all of our stock option plans:

 

   Options  Weighted
Average
Exercise Price
   Weighted
Average
Remaining
Contractual
Term (Years)
   Aggregate
Intrinsic  Value
(Thousands)
 

Outstanding at January 1, 2010 (7,000 exercisable)

   20,000   $2,375.08      

Granted

   16,000   $11.47      

Exercised

   —     $—        

Forfeited

   (1,000 $23.65      

Cancelled and expired

   (1,000 $20,652.72      
  

 

 

      

Outstanding at December 31, 2010 (17,000 exercisable)

   34,000   $744.74      

Granted

   126,000   $5.48      

Exercised

   —     $—        

Forfeited

   (2,000 $9.91      

Cancelled and expired

   (2,000 $6,740.99      
  

 

 

      

Outstanding at December 31, 2011 (59,000 exercisable)

   156,000   $90.07      

Granted

   179,000   $4.92      

Exercised

   —     $—        

Forfeited

   (23,000 $5.93      

Cancelled and expired

   (5,000 $886.13      
  

 

 

      

Outstanding at December 31, 2012

   307,000   $33.72     8.9    $—    
  

 

 

      

Vested or expected to vest at December 31, 2012

   286,000   $35.94     8.5    $—    

Exercisable at December 31, 2012

   105,000   $89.08     8.1    $—    

   Options  Weighted
Average
Exercise
Price
   Weighted
Average
Remaining
Contractual
Term (Years)
   Aggregate
Intrinsic
Value
(Thousands)
 

Outstanding at January 1, 2011 (17,000 exercisable)

   34,000   $744.74      

Granted

   126,000   $5.48      

Exercised

   —     $—        

Forfeited

   (2,000 $9.91      

Cancelled and expired

   (2,000 $6,740.99      
  

 

 

      

Outstanding at December 31, 2011 (59,000 exercisable)

   156,000   $90.07      

Granted

   179,000   $4.92      

Exercised

   —     $—        

Forfeited

   (23,000 $5.93      

Cancelled and expired

   (5,000 $886.13      
  

 

 

      

Outstanding at December 31, 2012 (105,000 exercisable)

   307,000   $33.72      

Granted

   4,352,000   $1.71      

Exercised

   —     $—        

Forfeited

   (112,000 $2.40      

Cancelled and expired

   (28,000 $133.72      
  

 

 

      

Outstanding at December 31, 2013

   4,519,000   $3.04     9.53    $889  
  

 

 

      

Vested or expected to vest at December 31, 2013

   4,241,404   $3.12     9.53    $842  

Exercisable at December 31, 2013

   1,560,000   $5.39     9.54    $358  

The weighted average exercise price of options exercisable at December 31, 2012 and 2011 was $89.08 and 2010 was $228.95, and $1,444.36, respectively. The weighted average grant-date fair value of options granted during 2013, 2012 and 2011 was $1.32, $3.28 and 2010 was $3.28, $3.93 and $8.27 per option, respectively.

Restricted Stock

We issued 6.4 million, 4.3 million 1.7 million and 1.31.7 million shares of restricted common stock in 2013, 2012 2011 and 2010,2011, respectively. The weighted average grant-date fair value of restricted shares issued during 2013, 2012 and 2011 was $1.21, $4.77 and 2010 was $4.77, $6.23, and $13.11, respectively. Additionally, 1.2 million, 0.9 million 1.2 million and 0.21.2 million shares of restricted stock were cancelled during 2013, 2012 2011 and 2010,2011, respectively.

A summary of the status of nonvested restricted stock awards as of December 31, 20122013 and changes during the period then ended, is presented below:

 

  Nonvested Shares Weighted Average
Grant-Date  Fair Value
Per Share
   Nonvested Shares Weighted Average
Grant-Date Fair Value
Per Share
 

Nonvested at December 31, 2011

   1,340,000   $6.25  

Nonvested at December 31, 2012

   3,322,000   $5.26  

Issued

   4,308,000   $4.77     6,375,000   $1.21  

Vested

   (1,408,000 $4.38     (3,841,000 $1.83  

Forfeited

   (918,000 $5.75     (1,168,000 $3.70  
  

 

    

 

  

Nonvested at December 31, 2012

   3,322,000   $5.26  

Nonvested at December 31, 2013

   4,688,000   $2.95  
  

 

    

 

  

The total fair value of restricted stock awards vested during the years ended December 31, 2013, 2012 and 2011 and 2010 was $5.1 million, $3.4 million and $3.5 million, and $3.2 million, respectively.

December 2009 Performance Awards

Share-based compensation expense for the year ended December 31, 2010 included $13.9 million related to the portion of the restricted stock units granted to our executive officers and directors in December 2009 (which we refer to as our December 2009 performance awards) with the market-based performance condition. In December 2011, the December 2009 performance awards expired and the related shares of restricted stock were cancelled and returned to the Company as none of the performance conditions were met prior to expiration.

2012-2014Long-Term Performance Awards

In November 2011, we granted restricted stock units to our executive officers and directors that became effective on January 3, 2012, (which we referor the Long-Term Performance Awards (previously referred to as our 2012-2014 performance awards). Similar to the December 2009 performance awards, the 2012 performance awardsThe Long-Term Performance Awards vest upon milestone-based performance conditions. If one or more of the eight underlying performance-based conditions are timely achieved, the award recipient will be entitled to receive a number of shares of our common stock (subject to share limits of the Plan), determined by multiplying (i) the award percentage corresponding to that particular performance goal by (ii) the total number of outstanding shares of our common stock as of the date that the particular performance goal is achieved. In March 2013, certain performance criteria of the Long-Term Performance Awards were modified, two new performance goals were added, one goal was cancelled, and the expiration date was extended to December 31, 2015. The total award percentages related to all eight performance goals in effect as of December 31, 2013 are 7.5%7.0% and 2.5%2.7% of shares outstanding at the time the performance goals are achieved for executive officersthe senior management and directors,director participants, respectively. A portion of each of these awards was granted in the form of restricted shares of common stock issued on January 3, 2012.

The fair value of the 2012-2014 performance awardsLong-Term Performance Awards was estimated based on the average present value of the awards to be issued upon achievement of the performance conditions. The average present value was calculated based upon the expected date the shares of common stock underlying the performance awards will vest, or the event date, the expected stock price on the event date, and the expected shares outstanding as of the event date. The event date, stock price and the shares outstanding were estimated using a Monte Carlo simulation

model, which is based on assumptions by management, including the likelihood of achieving the milestones and potential future financings.

In June 2012, our boardBoard of directorsDirectors certified completion of the performance condition relating to approval of our marketing authorization application for PIXUVRI in the European Union and 0.4 million shares vested to our executive officers and directors. We recognized $1.1 million in share-based compensation upon satisfaction of this performance condition for the year ended December 31, 2012. Subsequently, unvested performance awards representing rights to receive approximately 0.9% and 2.3% of shares outstanding at the time the respective performance goals would have been achieved were forfeited upon separation of certain executive officers from us in 2012. 2013 and 2012, respectively.

We determined the 2012-2014 performance awardsLong-Term Performance Awards with market-based performance conditions have a grant-date fair value of $3.5$4.8 million. We determined the market-based performance condition had an incremental fair value of $0.8 million on the modification date in March 2013, which is being recognized in addition to the unrecognized grant-date fair value as of which wethe modification date over the remaining estimated requisite service period. We recognized $1.2 million and $1.3 million in share-basedshare based compensation expense related to the performance awards with market-based performance conditions for the yearyears ended December 31, 2012.2013 and 2012, respectively.

In January 2014, the expiration date of the Long-Term Performance Awards was extended to December 31, 2016, and two new performance criteria were added to the performance awards.

Nonemployee Share-Based Compensation

Share-based compensation expense for awards granted to nonemployees is determined using the fair value of the consideration received or the fair value of the equity instruments issued, whichever is more reliably measured. The fair value of options and restricted stock awards granted to nonemployees is periodically remeasured as the underlying options or awards vest. The value of the instrument is amortized to expense over the vesting period with final valuation measured on the vesting date. As of December 31, 2012, all nonemployee options2013 and restricted stock awards have vested. As of December 31, 2011 and 2010 unvested nonemployee options to acquire approximately 2,000157,000 and 3,0002,000 shares of common stock were outstanding, respectively. Additionally, unvested nonemployee restricted stock awards totaled approximately

163,000 and 2,000 and 5,000 as of December 31, 2013 and 2011, respectively. As of December 31, 2012, all nonemployee options and 2010, respectively.restricted stock awards had vested. We recorded compensation expense of $310,000 and $58,000 in 2013 and 2011, respectively, and reversed previously recorded compensation expense of $1,000 and $24,000 in 2012 and 2010, respectively related to nonemployee stock options and restricted stock awards.

Employee Stock Purchase Plan

Under our 2007 Employee Stock Purchase Plan, as amended and restated in August 2009, or the Purchase Plan, eligible employees may purchase a limited number of shares of our common stock at 85% of the lower of the subscription date fair market value and the purchase date fair market value. There are two six-month offerings per year. Under the Purchase Plan, we issued approximately 3,000 3,000 and 2,000 shares to employees in each year ended December 31, 2013, 2012 2011 and 2010, respectively.2011. There are 50,833 shares of common stock authorized under the Purchase Plan and 41,95138,631 shares are reserved for future purchases as of December 31, 2012.2013.

 

14.16.Employee Benefit Plans

The Company’s U.S. employees participate in the Cell Therapeutics, Inc. 401(k) Plan whereby eligible employees may defer up to 80% of their compensation, up to the annual maximum allowed by the Internal Revenue Service. We may make discretionary matching contributions based on certain plan provisions. We recorded $0.2 million, $0.1$0.2 million and $0.1 million related to discretionary matching contributions during each of the years ended December 31, 2013, 2012 2011 and 2010,2011, respectively.

In connection with our merger with Novuspharma, on January 1, 2004, we assumed a defined benefit plan and related obligation for benefits owed to our Italian employees who, pursuant to Italian law, were entitled to a lump sum payment upon separation from the Company. Related costs were accrued over the employees’ service periods based on compensation and years of service. In accordance with ASC 715,Compensation-Retirement Benefits, we elected to carry the obligation under the plan at the amount of the vested benefit obligation which is defined as the actuarial present value of the vested benefit to which the employee is entitled if the employee separates immediately. Benefits of $0.6 million were paid during 2010 to employees who separated from the Company. We made all final defined benefit plan payments to separated employees in 2010 and no further obligation existed upon completion of the employee termination agreements.

15.17.Shareholder Rights Plan

In December 2009, our boardBoard of directorsDirectors approved and adopted a shareholder rights plan, or Rights Plan, in which one preferred stock purchase right was distributed for each common share held as of the close of business on January 7, 2010. Initially, the rights are not exercisable, and are attached to and trade with, all of the shares of CTI’s common stock outstanding as of, and issued subsequent to January 7, 2010. In 2012, our boardBoard of directorsDirectors approved certain amendments to the Rights Plan.

Each right, if and when it becomes exercisable, will entitle the holder to purchase a unit consisting of one ten-thousandth of a share of Series ZZ Junior Participating Cumulative Preferred Stock, no par value per share, at a cash exercise price of $8.00 per unit, subject to standard adjustment in the Rights Plan. The rights will separate from the common stock and become exercisable if a person or group acquires 20% or more of our common stock. Upon acquisition of 20% or more of our common stock, the Board could decide that each right (except those held by a 20% shareholder, which become null and void) would become exercisable entitling the holder to receive upon exercise, in lieu of a number of units of preferred stock, that number of shares of our common stock having a market value of two times the exercise price of the right. In certain circumstances, including if there are insufficient shares of our common stock to permit the exercise in full of the rights, the holder may receive units of preferred stock, other securities, cash or property, or any combination of the foregoing.

In addition, if we are acquired in a merger or other business combination transaction, each holder of a right, except those rights held by a 20% shareholder which become null and void, would have the right to receive, upon exercise, common stock of the acquiring company having a market value equal to two times the exercise price of the right. The Board may redeem the rights for $0.0001 per right or terminate the Rights Plan at any time prior to an acquisition by a person or group holding 20% or more of our common stock. The Rights Plan will expire on December 3, 2015.

 

16.18.Customer and Geographic Concentrations

We consider our operations to be a single operating segment focused on the development, acquisition and commercialization of novel treatments for cancer. Financial results of this reportable segment are presented in the accompanying consolidated financial statements.

All sales of PIXUVRI during 2013 were in Europe. Product sales from PIXUVRI’s major customers as a percentage of total product sales were as follows:

Year Ended
December 31,

2013

Customer A

67

Customer B

4

Customer C

3

The following table depicts long-lived assets based on the following geographic locations (in thousands):

 

  Year Ended December 31,   Year Ended December 31, 
��      2012           2011     
      2013           2012     

United States

  $6,570    $3,314    $5,336    $6,570  

Europe

   215     290     142     215  
  

 

   

 

   

 

   

 

 
  $6,785    $3,604    $5,478    $6,785  
  

 

   

 

   

 

   

 

 

 

17.19.Net Loss Per Share

Basic and diluted net loss per share is calculated using the weighted average number of shares outstanding as follows (in thousands, except per share amounts):

 

   Year Ended December 31, 
   2012  2011  2010 

Net loss attributable to common shareholders

  $(115,275 $(121,078 $(147,560

Basic and diluted:

    

Weighted average shares outstanding

   62,021    35,790    23,692  

Less weighted average restricted shares outstanding

   (3,896  (1,496  (871
  

 

 

  

 

 

  

 

 

 

Shares used in calculation of basic and diluted net loss per common share

   58,125    34,294    22,821  
  

 

 

  

 

 

  

 

 

 

Net loss per common share:

    

Basic and diluted

  $(1.98 $(3.53 $(6.47
  

 

 

  

 

 

  

 

 

 

   Year Ended December 31, 
   2013  2012  2011 

Net loss attributable to common shareholders

  $(49,643 $(115,275 $(121,078

Basic and diluted:

    

Weighted average shares outstanding

   119,042    62,021    35,790  

Less weighted average restricted shares outstanding

   (4,847  (3,896  (1,496
  

 

 

  

 

 

  

 

 

 

Shares used in calculation of basic and diluted net loss per common share

   114,195    58,125    34,294  
  

 

 

  

 

 

  

 

 

 

Net loss per common share: Basic and diluted

  $(0.43 $(1.98 $(3.53
  

 

 

  

 

 

  

 

 

 

Options, warrants, unvested restricted share awards and rights, convertible debt, and convertible preferred stock aggregating 15.4 million, 8.6 million 10.2 million and 3.410.2 million common share equivalents were not included in the calculation of diluted net loss per share as their effects on the calculation were anti-dilutive as of December 31, 2013, 2012 2011 and 2010,2011, respectively, prior to the application of the as-if converted method for convertible securities and the treasury stock method for other dilutive securities, such as options and warrants. These amounts do not include outstanding share-based awards with market- or performance-based vesting conditions.

 

18.20.Related Party Transactions

In May 2007, we formed Aequus, a majority-owned subsidiary of which our ownership was approximately 61% as of December 31, 2012.2013. We entered into a license agreement with Aequus whereby Aequus gained rights to our Genetic Polymer™ technology which Aequus will continue to develop. The Genetic Polymer technology may speed the manufacture, development, and commercialization of follow-on and novel protein-based therapeutics.

In May 2007, we also entered into an agreement to fund Aequus in exchange for a convertible promissory note. The terms of the note provide that earns(i) interest accrues at a rate of 6% per annum until maturity, (ii) in the event the note balance is not paid on or before the maturity date, interest accrues at a rate of 10% per annum and

(iii) prior to maturity, the note is convertible into a number of shares of Aequus equity securities equal to the quotient obtained by dividing (a) the outstanding balance of the note by (b) the price per share of the Aequus equity securities. The note matured and was scheduled to become due and payable in May 2012.2012, although it has not yet been repaid. We are currently in negotiations with Aequus to, among other things, extend the maturity date of this note, which can be converted into equity at any time prior to maturity upon CTI’s demand, or upon other triggering events. The number of shares of Aequus equity securities to be issued upon conversion of this note is equal to the quotient obtained by dividing (i) the outstanding balance of the note by (ii) the price per share of the Aequus equity securities.note. In addition, we entered into a services agreement to provide certain administrative and research and development services to Aequus. The amounts charged for these services, if unpaid by Aequus within 30 days, will be considered additional principal advanced under the promissory note. We funded Aequus $0.6$1.5 million, $0.6 million and $0.5$0.6 million during the years ended December 31, 2013, 2012 2011 and 2010,2011, respectively, including amounts advanced in association with the services agreement. The convertible promissoryAequus note balance, including accrued interest, was approximately $4.0$5.8 million and $3.2$4.0 million as of December 31, 20122013 and 2011,2012, respectively. This intercompany balance was eliminated in consolidation.

Our President and Chief Executive Officer, James A. Bianco, M.D., and our Executive Vice President, Global Medical Affairs and Translational Medicine, Jack W. Singer, M.D., are both minority shareholders of Aequus, each owning approximately 4.3% of the equity in Aequus as of December 31, 2012.2013. Both Dr. Bianco and Dr. Singer are members of Aequus’ boardBoard of directors.Directors. Additionally, Frederick W. Telling, Ph.D., a member of our boardBoard of directors,Directors, owns approximately 1.3% of Aequus as of December 31, 20122013 and is also a member of Aequus’ boardBoard of directors.Directors.

 

19.21.Legal Proceedings

OnIn August 3, 2009, SICOR Società Italiana Corticosteroidi S.R.L., or Sicor, filed a lawsuit in the Court of Milan to obtain the Court’s assessment that we were bound to source athe chemical compound, whose chemical name is BBR2778, from Sicor according to the terms of a supply agreement executed between Sicor and Novuspharma S.p.A, or Novuspharma, a pharmaceutical company located in Italy, on October 4, 2002. We assertare the successor in interest to such agreement by virtue of our merger with Novuspharma in January 2004. Sicor alleged that the agreement was not terminated according to its terms. We asserted that the supply agreement in question was properly terminated and that we have no further obligation to comply with its terms. AtOn December 30, 2013, the hearingCourt of October 11, 2012, the parties informed the court about the ongoing negotiations pending between themMilan issued its decision and asked to postpone the case. Sicor alleges that the agreement was not terminated according to its terms. At the requestrejected all of Sicor’s claims; this proceeding has therefore concluded. The decision of the parties, the court extended the final hearing until March 21, 2013. No estimateCourt of a loss, if any, can be made at this time in the event that we do not prevail.Milan is subject to potential appeal.

On December 10, 2009, CONSOB sent us a notice claiming, among other things,now resolved claims, violation of the provisions of Section 114, paragraph 1 of the Italian Legislative Decree no. 58/98 due to the asserted late disclosure of the contents of the opinion expressed by Stonefield Josephson, Inc., an independent registered public accounting firm, with respect to our 2008 financial statements. The sanctionssanction established by Section 193, paragraph 1 of the Italian Legislative Decree no. 58/98 for such violationsviolation could require us to pay a pecuniary administrative sanction amounting to between $7,000 and $659,000$689,000 upon conversion from euros as of December 31, 2012.

2013. Until CONSOB’s right is barred, CONSOB may, at any time, confirm the occurrence of the asserted violation and apply a pecuniary administrative sanction within the foregoing range. To date, we have not received any such notification.

VAT Assessments

The Italian Tax Authority, or ITA, issued notices of assessment to CTI (Europe) based on the ITA’s audit of CTI (Europe)’s VAT returns for the years 2003, 2005, 2006 and 2007.2007 (collectively, the “VAT Assessments”). The ITA audits concluded that CTI (Europe) did not collect and remit VAT on certain invoices issued to non-Italian clients for services performed by CTI (Europe). We believe that the services invoiced were non-VAT taxable consultancy services and that the VAT returns are correct as originally filed. We are vigorously defending ourselves against the assessments both on procedural grounds and on the merits of the case. We received favorable rulings in 2012, which remain subject to further appeal, and our then remaining deposit for the VAT assessmentsAssessments was refunded to us in January 2013. Due to the change of the position for the VAT assessment cases,Assessments, we have reversed the entire reserve for VAT assessed as of December 31, 2012.

In June 2013, the Regional Tax Court issued decision no. 119/50/13 in regards to the 2003 VAT assessment, which accepted the appeal of the ITA and reversed the previous decision of the Provincial Tax Court. We believe that such decision has not carefully taken into account our arguments and the documentation we filed, and we therefore plan to appeal such decision in front of the Supreme Court both on procedural grounds and on the merits of the case. In January 2014, we were notified that the ITA has requested partial payment of the 2003 VAT assessment in the amount of $593,000 upon conversion from euros as of December 31, 2013. We paid such amount in March 2014.

If the final decisions of the lower tax courts (i.e.Supreme Court for the Provincial Tax Court or the Regional Tax Court) or of the Supreme CourtVAT Assessments are unfavorable to us, we may incur up to $12.4$12.9 million in losses for the VAT amount assessed including penalties, interest and fees upon conversion from euros onas of December 31, 2012.

In addition to the contingencies discussed above, we are from time to time subject to legal proceedings and claims arising in the ordinary course of business, some of which may be covered in whole or in part by insurance.2013.

 

20.22.Income Taxes

We file income tax returns in the United States, Italy and the United Kingdom. A substantial part of our operations takes place in the State of Washington, which does not impose an income tax as that term is defined in ASC 740,Income Taxes. As such, our state income tax expense or benefit, if recognized, would be immaterial to our operations. We are not currently under examination by an income tax authority, nor have we been notified that an examination is contemplated.

Deferred income taxes reflect the net tax effects of temporary differences between the carrying values of assets and liabilities for financial reporting and income tax reporting in accordance with ASC 740. We have a valuation allowance equal to net deferred tax assets due to the uncertainty of realizing the benefits of the assets. Our valuation allowance increased $11.3 million, decreased $87.6$113.5 million and increased $3.6 million during 2013, 2012 and increased $17.8 million during 2012, 2011, and 2010, respectively.

The reconciliation between our effective tax rate and the income tax rate as of December 31, 2013, 2012 2011 and 20102011 is as follows:

 

  2012 2011 2010   2013 2012 2011 

Federal income tax rate

   (34%)   (34%)   (34%)    (34%)   (34%)   (34%) 

Research and development tax credits

   (1  (2  (1   (3  —      (2

I.R.C. Section 382 limited research and development tax credits

   2    —      —       —      1    —    

Non-deductible debt/equity costs

   —      1    5     —      —      1  

Non-deductible executive compensation

   1    1    —       1    1    1  

I.R.C. Section 382 limited net operating losses

   109    21    —       3    134    21  

Valuation allowance

   (86  6    22     27    (111  6  

Expired tax attribute carryforwards

   7    7    7     —      7    7  

Foreign tax rate differential

   6    1    —    

Other

   2    —      1     —      1    —    
  

 

  

 

  

 

   

 

  

 

  

 

 

Net effective tax rate

              
  

 

  

 

  

 

   

 

  

 

  

 

 

Significant components of our deferred tax assets and liabilities as of December 31, 2013 and 2012 and 2011 arewere as follows (in thousands):

 

  2012 2011   2013 2012 

Deferred tax assets:

      

Net operating loss carryforwards

  $60,079   $150,101    $49,777   $34,655  

Capitalized research and development

   36,303    43,604     31,046    36,303  

Research and development tax credit carryforwards

   686    2,556     1,486    223  

Stock based compensation

   10,813    9,349     12,097    10,813  

Intangible assets

   11,336    487     10,518    11,336  

Depreciation and amortization

   8    1,890     96    8  

Other deferred tax assets

   3,621    2,138     3,062    3,621  
  

 

  

 

   

 

  

 

 

Total deferred tax assets

   122,846    210,125     108,082    96,959  

Less valuation allowance

   (121,836  (209,407   (107,271  (95,949
  

 

  

 

   

 

  

 

 
   1,010    718     811    1,010  

Deferred tax liabilities:

      

GAAP adjustments on Novuspharma merger

   (208  (208   (208  (208

Deductions for tax in excess of financial statements

   (802  (510   (603  (802
  

 

  

 

   

 

  

 

 

Total deferred tax liabilities

   (1,010  (718   (811  (1,010

Net deferred tax assets

  $—     $—      $—     $—    
  

 

  

 

   

 

  

 

 

Due to our equity financing transactions, and other owner shifts as defined in Internal Revenue Code Section 382 (the “Code”), we incurred “ownership changes” pursuant to the Code. These ownership changes trigger a limitation on our ability to utilize our net operating losses (NOL) and research and development credits against future income. We have obtained a private letter ruling (PLR) that determines the availability of the NOL after a 2007 ownership change.

In MayOctober 2012, an “ownership change” occurred. The ownership change limits the utilization of certain tax attributes including the NOL. After the MayOctober 2012 ownership change the utilization of the NOL is limited to approximately $6.1$4.3 million annually. At December 2012,2013, the gross NOL carryforward iswas approximately $1.1$1.0 billion. The annual NOL limitation will reduce the available NOL carryforward to approximately $176.7$146.4 million. The deferred tax asset and valuation allowance have been reduced accordingly.

Effective January 1, 2007, we adopted the provisions of FASB Interpretation 48,Accounting for Uncertainty in Income Taxes, as codified in ASC 740-10, and we have analyzed filing positions in our tax returns for all open years. We are subject to United States federal and state, Italian and United Kingdom income taxes with varying statutes of limitations. Tax years from 1998 forward remain open to examination due to the carryover of net operating losses or tax credits. Our policy is to recognize interest related to unrecognized tax benefits as interest expense and penalties as operating expenses. As of December 31, 2012,2013, we had no unrecognized tax benefits and therefore no accrued interest or penalties related to unrecognized tax benefits. We believe that our income tax filing positions reflected in the various tax returns are more-likely-than not to be sustained on audit and thus there are no anticipated adjustments that would result in a material change to our consolidated financial position, results of operations and cash flows. Therefore, no reserves for uncertain income tax positions have been recorded.

In July 2013, the FASB issued guidance on the presentation of an unrecognized tax benefit when a net operating loss carryforward, similar tax loss or tax carryforward exists. FASB concluded that an unrecognized tax benefit should be presented as a reduction of a deferred tax asset except in certain circumstances the unrecognized tax benefit should be presented as a liability and should not be combined with deferred tax assets. The amendment is effective prospectively for fiscal years, and interim periods within those years, beginning after December 15, 2013, with early adoption permitted. The Company will adopt this standard in the first quarter of 2014 and does not expect the adoption of this standard to have an impact on its consolidated financial statements.

21.23.Unaudited Quarterly Data

The following table presents summarized unaudited quarterly financial data (in thousands, except per share data):

 

  First
Quarter
 Second
Quarter
 Third
Quarter
 Fourth
Quarter
   First
Quarter
 Second
Quarter
 Third
Quarter
 Fourth
Quarter
 

2013

    

Total revenues (1)

  $1,126   $306   $362   $32,884  

Product sales, net

   1,126    306    362    520  

Gross profit

   1,071    270    349    487  

Operating costs and expenses

   (19,553  (18,158  (15,942  (22,551

Net income (loss) attributable to CTI

   (19,384  (18,011  (15,544  10,196  

Net income (loss) attributable to CTI common shareholders

   (19,384  (18,011  (22,444  10,196  

Net income (loss) per common share—basic

   (0.18  (0.17  (0.20  0.08  

Net income (loss) per common share—diluted

   (0.18  (0.17  (0.20  0.08  

2012

          

Revenues

  $—     $—     $—     $—    

Total revenues

  $—     $—     $—     $—    

Product sales, net

   —      —      —      —    

Gross profit

   —      —      —      —       —      —      —      —    

Operating expenses, net

   (18,098  (49,400  (15,149  (18,850

Operating costs and expenses (2)

   (18,098  (49,400  (15,149  (18,850

Net loss attributable to CTI

   (17,446  (50,138  (15,189  (18,601   (17,446  (50,138  (15,189  (18,601

Net loss attributable to CTI common shareholders

   (17,446  (58,596  (20,203  (19,030   (17,446  (58,596  (20,203  (19,030

Net loss per common share—basic and diluted

   (0.43  (1.38  (0.38  (0.20

2011

     

Revenues

  $—     $—     $—     $—    

Gross profit

   —      —      —      —    

Operating expenses, net

   (20,070  (16,919  (15,290  (9,911

Net loss attributable to CTI

   (19,734  (16,997  (16,662  (8,967

Net loss attributable to CTI common shareholders

   (51,017  (22,508  (29,685  (17,868

Net loss per common share—basic and diluted

   (1.74  (0.68  (0.80  (0.47

Net loss per common share—basic

   (0.43  (1.38  (0.38  (0.20

Net loss per common share—diluted

   (0.43  (1.38  (0.38  (0.20

Operating expenses, net for the fourth quarter of 2011 include income of $11.0 million resulting from our settlement with The Lash Group, Inc.Operating expenses, net for the second quarter of 2012 include charges of $29.1 million of acquired in-process research and development related to our acquisition of assets from S*BIO, see Note 4,Acquisitions for additional information.

(1)Total revenues for the fourth quarter of 2013 include $27.4 million oflicense and contract revenue recognized in connection with the collaboration agreement with Baxter in November 2013 and $5.0 million oflicense and contract revenue from Teva in November 2013 upon the achievement of a worldwide net sales milestone of TRISENOX. See Note 14,Collaboration, Licensing and Milestone Agreements, for additional information.
(2)Operating costs and expenses for the second quarter of 2012 include charges of $29.1 million of acquired in-process research and development related to our acquisition of assets from S*BIO. See Note 5,Acquisitions, for additional information.

Item 9.Changes in and Disagreements with Accountants on Accounting and Financial Disclosure

None.

 

Item 9A.Controls and Procedures

(a) Evaluation of Disclosure Controls and Procedures

We maintain disclosure controls and procedures that are designed to ensure that information required to be disclosed in reports filed under the Securities Exchange Act of 1934, or the Exchange Act, is recorded, processed, summarized and reported within the time periods specified in the SEC rules and forms, and that such information is accumulated and communicated to our management to allow timely decisions regarding required disclosure. In designing and evaluating the disclosure controls and procedures, our management recognizes that any controls and procedures, no matter how well designed and operated, can provide only reasonable assurance of achieving the desired control objectives.

Our management, under the supervision and with the participation of our Chief Executive Officer and Executive Vice President, Finance and Administration, or EVP of Finance, has evaluated the effectiveness of the design and operation of our disclosure controls and procedures, as defined in Rules 13a-15(e) and 15d-15(e) under the Securities Exchange Act of 1934, as amended, as of the end of the period covered by this report. Based upon that evaluation, our Chief Executive Officer and EVP of Finance have concluded that, as of the end of the period covered by this report, our disclosure controls and procedures were effective.

(b) Management’s Annual Report on Internal Controls

Management of Cell Therapeutics, Inc., together with its consolidated subsidiaries (the Company), is responsible for establishing and maintaining adequate internal control over financial reporting. The Company’s internal control over financial reporting is a process designed under the supervision of the Company’s principal executive and principal financial officers to provide reasonable assurance regarding the reliability of financial reporting and the preparation of the Company’s financial statements for external reporting purposes in accordance with U.S. generally accepted accounting principles.

As of the end of the Company’s 20122013 fiscal year, management conducted an assessment of the effectiveness of the Company’s internal control over financial reporting based on the framework established in Internal“Internal Control—Integrated FrameworkFramework” (1992) issued by the Committee of Sponsoring Organizations of the Treadway Commission (COSO). Based on this assessment, management has determined that the Company’s internal control over financial reporting as of December 31, 20122013 was effective.

The registered independent public accounting firm of Marcum LLP, as auditors of the Company’s consolidated financial statements, has audited our internal controls over financial reporting as of December 31, 2012,2013, as stated in their report, which appears herein.

(c) Changes in Internal Controls

There have been no changes to our internal control over financial reporting that occurred during the period covered by this reportfourth fiscal quarter that have materially affected, or are reasonably likely to materially affect, our internal control over financial reporting.

 

Item 9B.Other Information

None.

PART III

 

Item 10.Directors, Executive Officers and Corporate Governance

Directors

The following table set forth certain information required by this Item is incorporated herein by reference from the Company’s 2014 definitive proxy statement (which will be filed with respect to our directors asthe SEC within 120 days after December 31, 2013 in connection with the solicitation of February 28, 2013 :

Name

  Age   Director
Since
   Class   

Term Expiration

John H. Bauer(3)

   72     2005     I    2013 Annual Meeting

James A. Bianco, M.D.

   56     1991     II    2014 Annual Meeting

Vartan Gregorian, Ph.D.(3)(4)

   78     2001     II    2014 Annual Meeting

Richard L. Love(2)(4)

   69     2007     III    2015 Annual Meeting

Mary O. Mundinger, DrPH(2)(4)

   75     1997     III    2015 Annual Meeting

Phillip M. Nudelman, Ph.D.(1)(2)(3)(4)

   77     1994     I    2013 Annual Meeting

Jack W. Singer, M.D.

   70     1991     III    2015 Annual Meeting

Frederick W. Telling, Ph.D.(2)(3)

   61     2006     II    2014 Annual Meeting

Reed V. Tuckson, M.D.

   62     2011     I    2013 Annual Meeting

(1)Chairman of our board of directors.
(2)Member of the Compensation Committee.
(3)Member of the Audit Committee.
(4)Member of the Nominating and Governance Committee.

Mr. Bauer has been one of our directors since October 2005. Mr. Bauer serves as an executive advisor and Chief Financial Officer at DigiPen Institute of Technology. He was formerly Executive Vice President for Nintendo of America Inc. from 1994 to 2004. While at Nintendo of America Inc., he had direct responsibility for all administrative and finance functions. He has also served as a consultant to Nintendo of America Inc. From 1963 to 1994, he worked for Coopers & Lybrand, including serving as the business assurance (audit) practice partner. He was also a member of Coopers & Lybrand’s Firm Council, the senior policy making and governing boardproxies for the firm. Mr. Bauer is also a memberCompany’s 2014 annual meeting of the board of directors of RIPL Corporation and Zones, Inc. Mr. Bauer received his B.S. degree in accounting from St Edward’s University.

Dr. Bianco is our principal founder and served as our President and Chief Executive Officer and director from February 1992 to July 2008. With the addition of Craig W. Philips as President in August 2008, Dr. Bianco now serves as our President, Chief Executive Officer and director. Prior to founding the Company, Dr. Bianco was an assistant professor of medicine at the University of Washington, Seattle, and an assistant member in the clinical research division of the Fred Hutchinson Cancer Research Center. From 1990 to 1992, Dr. Bianco was the director of the Bone Marrow Transplant Program at the Veterans Administration Medical Center in Seattle. Dr. Bianco currently serves on the board of directors of the Seattle Police Foundation. Dr. Bianco received his B.S. degree in biology and physics from New York University and his M.D. from Mount Sinai School of Medicine. Dr. Bianco is the brother of Louis A. Bianco, our Executive Vice President, Finance and Administration.

Dr. Gregorian has been one of our directors since December 2001. He is the twelfth president of Carnegie Corporation of New York, a grant-making institution founded by Andrew Carnegie in 1911. Prior to his current position, which he assumed in June 1997, Dr. Gregorian served for eight years as Brown University’s sixteenth president. He was awarded a Ph.D. in history and humanities from Stanford University. A Phi Beta Kappa and a Ford Foundation Foreign Area Training Fellow, he is a recipient of numerous fellowships, including those from the John Simon Guggenheim Foundation, the American Council of Learned Societies, the Social Science Research Council, and the American Philosophical Society.

Mr. Love has been one of our directors since September 2007. Mr. Love is presently a manager of Translational Accelerators, LLC. Mr. Love is also a director of Applied Microarrays Inc., PAREXEL

International, SalutarisMD Inc. and acting chief executive officer of CerRx Inc., was previously a director of ImaRx Therapeutics Inc., and, prior to its acquisition by us in July 2007, served as chairman of the board of Systems Medicine, Inc. He started two biopharmaceutical companies, Triton Biosciences Inc. and ILEX Oncology Inc.; he served as chief executive officer for Triton Biosciences from 1983 to 1991, and as chief executive officer for ILEX Oncology 1994 to 2001. In addition, Mr. Love has served in executive positions at not-for-profit organizations, including the Cancer Therapy and Research Center, The San Antonio Technology Accelerator Initiative and the Translational Genomics Research Institute. Mr. Love received his B.S. and M.S. degrees in chemical engineering from Virginia Polytechnic Institute.

Dr. Mundingerhas been one of our directors since April 1997. From 1986 to 2010, she was a dean and professor at the Columbia University School of Nursing, and an associate dean on the faculty of medicine at Columbia University. In July 2010, Dr. Mundinger was appointed the Edward M. Kennedy Professor in Health Policy and Dean Emeritus at the Columbia University School of Nursing. Dr. Mundinger has served on the board of directors of United Health Group and Gentiva Health Services and is an elected member of the Institute of Medicine of the National Academies, the American Academy of Nursing and the New York Academy of Medicine. Dr. Mundinger received her doctorate in public health from Columbia’s School of Public Health.

Dr. Nudelman has been one of our directors since March 1994. From 2000 to 2007, he served as the President and Chief Executive Officer of The Hope Heart Institute. From 1998 to 2000, he was the Chairman of the Board of Kaiser/Group Health, retiring in 2000 as Chief Executive Officer Emeritus. From 1990 to 2000, Dr. Nudelman was the President and Chief Executive Officer of Group Health Cooperative of Puget Sound, a health maintenance organization. He also currently serves on the board of directors of OptiStor Technologies, Inc. and Zynchros, Inc. Dr. Nudelman served on the White House Task Force for Health Care Reform from 1992 to 1994 and the President’s advisory Commission on Consumer Protection and Quality in Health Care from 1996 to 1998. He has also served on the Pew Health Professions Commission and the AMA Task Force on Ethics, the Woodstock Ethics Commission, and currently serves as Chairman of the American Association of Health Plans. Dr. Nudelman received his B.S. degree in microbiology, zoology and pharmacy from the University of Washington, and holds an M.B.A. and a Ph.D. in health systems management from Pacific Western University.

Dr. Singer is one of our founders and directors and currently serves as our Executive Vice President, Global Medical Affairs and Translational Medicine. Dr. Singer has been one of our directors since our inception in September 1991. From July 1995 to January 2004, Dr. Singer was our Executive Vice President, Research Program Chairman and from April 1992 to July 1995, he served as our Executive Vice President, Research and Development. Prior to joining us, Dr. Singer was a professor of medicine at the University of Washington and a full member of the Fred Hutchinson Cancer Research Center. From 1975 to 1992, Dr. Singer was the Chief of Medical Oncology at the Veterans Administration Medical Center in Seattle. Dr. Singer received his M.D. from State University of New York, Downstate Medical College.

Dr. Telling has been one of our directors since December 2006. Prior to his retirement in 2007, Dr. Telling was a corporate officer of Pfizer, most recently as Vice President of Corporate Policy and Strategic Management since 1994. He joined Pfizer in 1977 and was responsible for strategic planning and policy development throughout the majority of his career. He currently serves as chairman of Organics, Inc. and on the board of directors of Eisai N.A., and Aequus Biopharma, Inc. (a subsidiary of the Company). Dr. Telling is also a member of the Committee for Economic Development, the EAA, and the United Hospital Fund and is a non-board emeritus of ORBIS. Dr. Telling received his B.A. degree from Hamilton College and his Masters of Industrial and Labor Relations and Ph.D. in Economics and Public Policy from Cornell University.

Dr. Tuckson has been one of our directors since September 2011. Dr. Tuckson is the Executive Vice President and Chief of Medical Affairs of UnitedHealth Group and has served in that capacity since December 2006. Prior to his position at UnitedHealth Group, from January 2006 to December 2006, Dr. Tuckson served as Senior Vice President, Professional Standards, for the American Medical Association. He has also served as President of the Charles R. Drew University of Medicine and Science in Los Angeles, Senior Vice President for

Programs of the March of Dimes Birth Defects Foundation and Commissioner of Public Health for the District of Columbia. He currently serves on the board of directors of the Alliance for Health Reform, the American Telemedicine Association, the National Patient Advocate Foundation, Project Sunshine, and the Arnold P. Gold Foundation and the Advisory Committee to the Director of the National Institute of Health. Dr. Tuckson received his B.S. degree in Zoology from Howard University and his medical doctor degree from the Georgetown University School of Medicine, and completed the Hospital of the University of Pennsylvania’s General Internal Medicine Residency and Fellowship programs.

Executive Officers

The following table sets forth certain information with respect to our executive officers as of February 28, 2013:

Name

Age

Position

Steven E. Benner, M.D.

53Executive Vice President, Chief Medical Officer

James A. Bianco, M.D.

56President and Chief Executive Officer

Louis A. Bianco

60Executive Vice President, Finance and Administration

Matthew J. Plunkett, Ph.D.

41Executive Vice President, Corporate Development

Jack W. Singer, M.D.

70Executive Vice President, Global Medical Affairs and
Translational Medicine

For biographical information concerning Dr. James Bianco and Dr. Jack Singer, who are each our directors as well as executive officers, please see the discussionshareholders) (“2014 Proxy Statement”) under the heading “Directors.captions “Proposal 2 – Election of Directors,

Dr. Bennerassumed his role as our “Other Information – Executive Vice President, Chief Medical Officer on June 13, 2012. Prior to joining us, Dr. Benner was Senior Vice PresidentOfficers,” and Chief Medical Officer of OncoMed Pharmaceuticals from February 2007 to November 2011. From November 2002 to November 2006, Dr. Benner was Senior Vice President and Chief Medical Officer of Protein Design Labs Inc. (later PDL Biopharma). Prior to that, Dr. Benner held a series of positions of increasing responsibility at Bristol-Myers Squibb, where he held leadership roles in clinical oncology, drug development and licensing, culminating in his position as a Vice President in the company’s Pharmaceutical Research Institute. Prior to his work with industry, Dr. Benner held faculty appointments at the University of North Carolina and the University of Texas M.D. Anderson Cancer Center. He received his M.D. from the University of Missouri-Columbia and earned an M.H.S. in Clinical Epidemiology from Johns Hopkins University.

Mr. Bianco is one of our founders and has been our Executive Vice President, Finance and Administration since February 1, 1992. He was also a director from our inception in September 1991 to April 1992 and from April 1993 to April 1995. From January 1989 through January 1992, Mr. Bianco was a Vice President at Deutsche Bank Capital Corporation in charge of risk management. Mr. Bianco is a Certified Public Accountant and received his M.B.A. from New York University. Mr. Bianco and Dr. Bianco are brothers.

Dr. Plunkettassumed his role as our Executive Vice President, Corporate Development in September 2012. Prior to joining us, Dr. Plunkett was the Chief Financial Officer of the California Institute for Regenerative Medicine from November 2011 to August 2012. From July 2009 to April 2011, Dr. Plunkett was the Vice President and Chief Financial Officer of iPerian, Inc. From December 2000 to July 2009, Dr. Plunkett held positions at Oppenheimer & Co. and its U.S. predecessor, CIBC World Markets, including serving as Managing Director, Head of West Coast Biotechnology from December 2008 to July 2009 and Executive Director, Head of West Coast Biotechnology from January 2008 to December 2008. He received his B.S. in chemistry from Harvey Mudd College and a Ph.D. in organic chemistry from the University of California, Berkeley.

Audit Committee Financial Expert

Our board of directors has determined that Audit Committee member John Bauer is an “audit committee financial expert” as defined by the SEC.

Audit Committee

We have an Audit Committee established in accordance with Section 3(a)(58)(A) of the Exchange Act. John H. Bauer, Vartan Gregorian, Ph.D., Phillip M. Nudelman, Ph.D. and Frederick W. Telling, Ph.D., are the members of our Audit Committee. Our board of directors has determined that each of Mr. Bauer, Dr. Gregorian, Dr. Nudelman and Dr. Telling is independent within the meaning of the NASDAQ independent director standards.

Section 16(a)“Other Information – Beneficial Ownership Reporting Compliance of the Exchange Act

under Section 16(a) of the Exchange Act requires our executive officers and directors, and persons who own more than ten percent of a registered class of our equity securities, to file with the SEC reports of ownership and reports of changes in ownership of common stock and our other equity securities. Executive officers, directors and greater than ten percent shareholders are required by SEC regulations to furnish us with copies of all Section 16(a) forms they file. Based solely on review of this information or written representations from reporting persons that no other reports were required, we believe that, during the 2012 fiscal year, all Section 16(a) filing requirements applicable to our executive officers, directors and greater than ten percent beneficial owners complied with Section 16(a).

Code of Ethics

We have adopted a code of ethics for our senior executive and financial officers (including our principal executive officer and principal financial officer), as well as a code of ethics applicable to all employees and directors. Both codes of ethics are available on our website athttp://www.celltherapeutics.com/officers_and_directors. Shareholders may request a free copy of the codes of ethics from:

Cell Therapeutics, Inc.

Attention: Investor Relations

3101 Western Avenue, Suite 600

Seattle, WA 98121

(206) 282-7100

Any waivers of or amendments to our code of ethics will be posted on its website, athttp://www.celltherapeutics.com.

Corporate Governance Guidelines

We have adopted Corporate Governance Guidelines, which are available on our website athttp://www.celltherapeutics.com/officers_and_directors. Shareholders may request a free copy of the Corporate Governance Guidelines at the address and phone numbers set forth above.Act.”

 

Item 11.Executive Compensation

Compensation Discussion and Analysis

Executive Summary

The Compensation Committee oversees the Board’s responsibilities relating to the compensation ofinformation required by this Item is incorporated herein by reference from the Company’s chief executive officer and all other executive officers of the Company with a title of executive vice president and above or who otherwise report directly to the chief executive officer. (The individuals who served as executive officers of the Company during fiscal 2012 are listed in the Summary Compensation Table below and referred to herein as the Company’s “named executive officers”). In discharging this responsibility, the Compensation Committee evaluates and approves the Company’s compensation plans, policies and programs as they affect the named executive officers.

The Company’s executive compensation program is guided by the principle that the compensation of the executive officers should encourage creation of shareholder value and achievement of strategic corporate objectives. In furtherance of this principle, the Company’s executive compensation program includes a number of features intended to reflect best practices in the market and help ensure that the program reinforces shareholder interests. These features are described in more detail below in this Compensation Discussion and Analysis and include the following:

The Company has not increased base salaries for its executive officers since 2005 (or, in the case of executives who joined the Company after 2005, has not increased their base salaries since they joined the Company).

Executives’ bonuses2014 Proxy Statement under the Company’s annual incentive program are principally based on the achievement of specific performance objectives established early in the fiscal year by the Compensation Committee.

Vesting of a substantial percentage of executives’ equity awards is contingent on the achievement of specific performance goals established by the Compensation Committee. In 2009, the Company approved long-term incentive awards for each of the named executive officers that would vest if the Company achieved certain performance goals by December 31, 2011. The 2009 awards with goals that were not achieved by December 31, 2011 expired on December 31, 2011. In connection with the expiration of these awards, the Company approved new long-term incentive grants, effective January 3, 2012, to each of the named executive officers (other than Dr. Bennercaptions “Executive Compensation” and Dr. Plunkett who were not employed at that time) that will vest based on the Company’s achievement of specific operational and financial performance goals by December 31, 2014, or the 2012-2014 Performance Awards. These awards and the related performance goals are discussed in detail below in this Compensation Discussion and Analysis.

Effective for 2012, the Compensation Committee approved arrangements for each of the named executive officers that eliminated any tax gross-up payment for parachute payment taxes under Section 280G of the U.S. Internal Revenue Code.

Compensation Objectives and Philosophy

The Company believes that compensation of its executive officers should encourage creation of shareholder value and achievement of strategic corporate objectives. The Company attempts to align the interests of its shareholders and management by integrating compensation with the Company’s short-term and long-term corporate strategic and financial objectives. In order to attract and retain the most qualified personnel, the Company intends to offer a total compensation package competitive with companies in the pharmaceutical industries, taking into account relative company size, performance and geographic location as well as individual responsibilities and performance. However, the Company believes that it is important to provide executives with performance-based incentives that are tied to key corporate goals critical to the Company’s long-term success and viability.

The elements of compensation for the named executive officers include base salaries, annual cash incentives, long-term equity incentives, and perquisites, as well as severance benefits in connection with certain terminations of employment and additional benefits which are available to most other employees, including a 401(k) plan, employee stock purchase plan, health and welfare programs, and life insurance. In general, base salaries, perquisites and other benefit programs, and severance and other termination benefits are primarily intended to attract and retain highly qualified executives as they provide predictable compensation levels that reward executives for their continued service. Annual cash incentives are primarily intended to motivate executives to achieve specific strategies and operating objectives, while long-term equity incentives are primarily intended to align executives’ long-term interests with those of the Company’s shareholders. Executives have substantial portions of their compensation at risk for annual and long-term performance, with the largest portion at risk for the most senior executives. The “at risk” nature of the Company’s long-term compensation program is evidenced by the substantial forfeiture of long-term compensation opportunities on December 31, 2011 that were

previously granted by the Company for the 2009-2011 performance period, as noted in more detail belowand following the “Outstanding Equity Awards at Fiscal 2012 Year-End” table on page 122.

In light of the general current economic climate, the Company’s compensation philosophy and objectives for fiscal year 2012 continued to focus heavily on retention of the Company’s senior management team through this challenging time.

Compensation Process

As part of its process for determining the compensation for the named executive officers, the Compensation Committee considers competitive market data. As authorized by its charter, the Compensation Committee has engaged Milliman, Inc., or Milliman, an independent executive compensation consultant, to review the Company’s compensation plans, policies and programs that affect executive officers and to provide advice and recommendations on competitive market practices and specific compensation decisions. Milliman has worked directly with the Compensation Committee to assist the Compensation Committee in satisfying its responsibilities and will undertake no projects for management except at the request of the Compensation Committee chair and in the capacity of the Compensation Committee’s agent. To date, Milliman has not undertaken any projects for management or provided any services to the Company other than its services to the Compensation Committee.

In order to assess competitive market data for executive compensation, the Compensation Committee works with its compensation consultant to develop a peer group of companies with which the Company competes for executive talent (which may or may not be the same organizations that the Company competes with directly on a business level). Milliman assisted the Compensation Committee in reviewing the peer group identified for 2012, focusing most closely on industry type and organization size/complexity, with the best indicators of organization size in the Company’s industry being number of employees and enterprise value, although each company’s revenue and net income were also considered. Following this process, the Compensation Committee selected the following peer group for fiscal 2012 compensation decisions, all of which are biotechnology organizations with an oncology focus and at a stage of company development that is comparable to the Company in the current or near-term stage: Arena Pharmaceuticals, Inc., Ariad Pharmaceuticals, Inc., Array BioPharma, Inc., Cougar Biotechnology, Inc., Dendreon Corp., IDM Pharma, Inc., Intermune, Inc., Medviation, Inc., Progenics Pharmaceuticals Inc., Rigel Pharmaceutical, Inc., Seattle Genetics, Inc. and Spectrum Pharmaceuticals, Inc. The peer group was the same as the group identified for fiscal 2011 compensation decisions.

Once the peer group is established, the Compensation Committee then reviews the base salaries, annual cash-incentive compensation, long-term equity incentive compensation and total compensation for the Company’s executive officers as compared to the compensation paid by the companies within the Company’s peer group, comparing each executive officer to their counterparts in similar positions with the peer group companies. However, the Compensation Committee does not base its decisions on targeting compensation levels to specific benchmarks against the peer group. Instead, the Compensation Committee refers to the peer group compensation data as background information regarding competitive pay levels and also considers the other factors identified below in making its decisions.

In addition to consideration of the peer group data, the Compensation Committee also considers the value of each item of compensation, both separately and in the aggregate, in light of Company performance, each executive officer’s position within the Company, the executive officer’s performance history and potential for future advancement, and, with respect to long-term equity incentive compensation, the value of existing vested and unvested outstanding equity awards. The Compensation Committee also considers the recommendations of the Company’s chief executive officer with respect to the compensation for each executive other than himself. In setting compensation, the Compensation Committee also considers, among other factors, the possible tax consequences to the Company and its executive officers, the accounting consequences and the impact on shareholder dilution. The Compensation Committee does not assign a specific weight to these factors and none of

these factors by itself will compel a particular compensation decision. Instead, this information is used generally by the Compensation Committee to help inform its decision-making process. Except as noted below, decisions by the Compensation Committee are subjective, made in the exercise of the Compensation Committee’s judgment.

Principal Elements of Compensation

The principal elements of compensation for the Company’s executive officers are composed of base salary, annual cash incentive compensation, and long-term equity incentive compensation. The Company also provides other forms of compensation, including certain perquisites and other benefits. The Compensation Committee reviews, considers and approves each element of compensation, as well as all combined elements of compensation, for the named executive officers.

Base Salaries.    Base salaries, including merit-based salary increases, for the named executive officers are established based on the scope of their respective responsibilities, competitive market salaries and general levels of market increases in salaries, individual performance, achievement of the Company’s corporate and strategic goals and changes in job duties and responsibilities.

The Compensation Committee reviewed the base salaries of the named executive officers for 2012 and determined that they are generally competitive with the market when compared to the Company’s peer group despite the fact that the Company has not raised the base salaries of most of its executive officers in recent years. Given this continued competitiveness of the Company’s base salaries combined with its current business situation and the current economic climate, and consistent with the Company’s philosophy of providing relatively flat target levels of cash compensation while increasing equity awards during this challenging time, the Compensation Committee again determined that base salaries should not be raised in 2012. As a result, the named executive officers’ base salaries for fiscal 2012 were as follows: Dr. Bianco $650,000 (unchanged since established in 2005), Mr. Bianco $330,000 (unchanged since established in 2005), and Dr. Singer $340,000 (unchanged since established in 2005). The base salaries for fiscal 2012 for Mr. Philips and Mr. Eramian, each of whom terminated employment with the Company during 2012, were also unchanged from the levels in effect for fiscal 2011 and prior years.

As noted above, Dr. Benner and Dr. Plunkett each joined the Company during fiscal 2012. Their annual base salaries were set at $380,000 and $325,000, respectively, by the Compensation Committee based on competitive considerations and negotiations with each executive.

Annual Cash Incentive Compensation.    Annual cash incentives for the Company’s executive officers are designed to reward performance for achieving key corporate goals, which the Company believes in turn should increase shareholder value. In general, the annual incentive awards for executive officers are determined based on achievement of performance objectives established by the Compensation Committee for the fiscal year and an evaluation by the Compensation Committee of the contributions made by individual executives to the Company during the course of the year, including both realization of performance goals and other notable achievements which may not have been contemplated at the time the original performance goals were established.

In April 2012, the Compensation Committee established the 2012 cash incentive program for the Company’s named executive officers employed with the Company at that time, including target and maximum bonus opportunities for each executive as well as performance goals that would need to be achieved in order for the executive to receive such bonuses. Both target and maximum bonus opportunities under the program were determined by reference to a percentage of the executive officer’s base salary. For fiscal 2012 performance, the target bonus opportunities were 50% for Dr. Bianco, 40% for Mr. Philips, and 30% for each of Mr. Bianco, Dr. Singer and Mr. Eramian, and the maximum bonus opportunities were 125% for Dr. Bianco, 100% for Mr. Philips, and 75% for each of Mr. Bianco, Dr. Singer and Mr. Eramian. These target and maximum bonus levels were consistent with the levels established for the 2011 cash incentive program and were determined by the Compensation Committee, after consulting with Milliman, to be appropriate based on its subjective

assessment of the executive’s position and ability to directly impact the Company’s performance, and its subjective assessment of general compensation practices in place at companies in the Company peer group identified above. Bonuses under the 2012 cash incentive program were generally subject to a requirement that the executive officer be employed by the Company on the payment date.

There were three core elements to the 2012 cash incentive program, which together comprised each executive’s cash incentive opportunity: financial performance, drug development and individual performance. As indicated in the table below, a portion of each executive’s bonus opportunity was allocated to each of these elements, with the percentage of the total bonus opportunity allocated to a particular element based on the executive’s position and ability to affect the outcome for that particular goal. With the exception of the individual performance element, each element was composed of sub-elements as identified below. The individual performance element constituted only a small percentage of each executive’s target bonus, with each executive being eligible to receive up to 10% (or 15% in the case of Dr. Bianco and Dr. Singer) of his base salary under this element. Any bonus awarded under this element would be determined in the sole discretion of the Compensation Committee based on its subjective assessment of the executive’s performance during the fiscal year and any other factors it deemed appropriate.

For the financial performance element, performance for fiscal 2012 was measured based on the Company’s operating capital raised. In addition, financial performance would be measured based on the Company’s obtaining an agreement with its auditors to remove certain language in its SEC reports about its ability to continue as a going concern and a determination by the Commissione Nazionale per le Società e la Borsa to remove the Company from its black list. The executive would generally be entitled to receive the target bonus for the operating capital sub-element if the Company’s operating capital raised for fiscal 2012 equals or exceeds $75 million. The executive would be entitled to receive the maximum bonus if the Company’s operating capital for fiscal 2012 equals or exceeds $100 million. For the status change sub-element, the executive would be entitled to an additional bonus as noted in the table below.

For the drug development element, three of the performance goals established by the Compensation Committee for fiscal 2012 related to PIXUVRI. The executive would receive the portion of his bonus opportunity allocated to that particular performance goal as reflected in the table below if, during fiscal 2012, (1) the Company received approval from the European Commission of its marketing authorization application submission for PIXUVRI (“Pix EC Approval”), or (2) the Company enrolled at least 100 patients in PIXUVRI 306 trials (“Pix306 Goal”), or (3) the Company achieved 125 PIXUVRI “commercial patient starts” (“Pix Patient Starts”). In the case of Dr. Singer, however, a portion of his bonus opportunity was allocated to the initiation of a Phase III trial for Tosedostat (as opposed to the Pix Patient Starts goal established for the other executives). In addition, if, during fiscal 2012, the Company acquired one or more new products targeted for acquisition by the Company’s board of directors, the executive would receive the applicable portion of his bonus opportunity noted below.

The following table presents the approximate relative weightings between the sub-elements of the financial and drug development components of the program described above (with the incentive opportunity for each sub-element being expressed as a percentage of the executive’s base salary). The relative weightings are intended as guidelines, with the Compensation Committee having final authority to determine weightings and the appropriate final bonus amounts.

  Financial  Drug Development 
  Operating Capital  Status Changes  Pix
306 Goal
  Pix EC
Approval
  Pix Patient
Starts(1)
  New Product
Acquisition
 

Name

 Target  Maximum  Black List
Removal
  Going
Concern
Removal
     

James A. Bianco, M.D.

  20  40  10  10  5  15  10  20

Louis A. Bianco

  15  25  5  20  0  1.5  3.5  10

Jack W. Singer, M.D.

  2.5  10  2.5  2.5  10  15  10  10

Craig Philips

  5  10  5  10  10  15  30  10

Dan Eramian

  10  30  5  10  8  2  0  10

(1)As noted above, this goal for Dr. Singer related to the initiation of a new trial for tosedostat (as opposed to the Pix Patient Starts goal for the other executives).

In June 2012, the Compensation Committee determined that the Company had earlier in 2012 achieved the Pix EC Approval goal and the New Product Acquisition goal (with the acquisition of pacritinib). Accordingly, the Compensation Committee approved mid-year bonuses for each executive in the following amounts (expressed as a percentage of such executive’s base salary): Dr. Bianco, 35%; Mr. Bianco, 11.5%; Dr. Singer, 25%; Mr. Philips, 25%; and Mr. Eramian, 12%.

In December 2012, the Compensation Committee determined that the Company had raised $95 million in operating capital in 2012 and, accordingly, awarded each executive a bonus between the target and maximum amounts allocated to the operating capital raised sub-element of the program. In addition, the Compensation Committee determined that each executive employed with the Company through the end of 2012 should, based upon the Compensation Committee’s subjective assessment of each executive’s individual contributions during the year, receive his maximum amount under the individual performance element as identified above. While the Compensation Committee’s determination of these amounts was inherently subjective, the key factors in the Compensation Committee’s determination were the executives’ successes in 2012 in making PIXUVRI available for commercial sale in eight countries in the European Union, continuing the development of tosedostat, Opaxio and other pipeline products through clinical trials, and reducing costs and expenses below the levels approved by the Board in the annual budget, as well as the Compensation Committee’s subjective assessment that these bonuses were appropriate to help continue to retain the executive team.

Based on the Company’s performance against the pre-established financial goals discussed above, the bonus opportunities related to the regulatory procedures and development involving PIXUVRI, the acquisition of pacritinib, and the Compensation Committee’s general assessment of each executive’s individual performance during fiscal 2012, the Compensation Committee determined to award cash incentives for fiscal 2012 to each of the named executive officers in the following amounts (expressed as a percentage of such executive’s base salary and including the mid-year bonuses awarded in June 2012 identified above): Dr. Bianco, 85%; Mr. Bianco, 45%; and Dr. Singer, 45%. Mr. Philips and Mr. Eramian did not receive any bonus under the program beyond the mid-year bonuses awarded to them in June 2012 as they were not employed with the Company at the time the final bonus amounts were paid.

In connection with their joining the Company during 2012, the Company provided offer letters to Dr. Benner and Dr. Plunkett that included eligibility to receive a prorated bonus for 2012 as determined by the Compensation Committee in its discretion, with the target bonus for each executive being 30% of his base salary, and the maximum bonus being 75% of his base salary. In December 2012, the Compensation Committee awarded a 2012 bonus to Dr. Benner for $57,000 and to Dr. Plunkett for $32,500, each such bonus representing 30% of the executive’s base salary, as pro-rated based on the portion of 2012 the executive was employed with the Company. The Compensation Committee determined, in its judgment, that these awards were appropriate based on its subjective assessment of the executive’s performance during 2012.

Service Recognition Bonuses.    In January 2012, the Compensation Committee approved a special bonus of $50,000 to each of Mr. Bianco and Dr. Singer in recognition of each executive’s 20 years of service with the Company. The Compensation Committee determined that these awards were appropriate in light of each executive’s role as co-founder of the Company with Dr. Bianco and continuous service with the Company since its inception.

New-Hire Bonuses.    The Compensation Committee approved a bonus of $85,000 to Dr. Benner in connection with his joining the Company in June 2012 and relocating to the Seattle, Washington area. The Compensation Committee approved a new-hire bonus of $30,000 to Dr. Plunkett in connection with his joining the Company in September 2012. These bonuses were negotiated with the executive and determined by the Compensation Committee in its judgment based on competitive considerations. The bonuses are subject to repayment to the Company if the executive terminates his employment within one year after his hire date.

Long-Term Equity Incentive Compensation.    The Compensation Committee awards long-term equity incentive compensation to the Company’s executive officers to align their interests with those of the Company’s shareholders, to provide additional incentives to the Company’s executive officers to improve the long-term performance of the Company’s common stock and achieve the Company’s corporate goals and strategic objectives and to retain the Company’s executive officers. While stock options have been granted in the past, the Company’s current practice is primarily to grant long-term incentive awards to the named executive officers in the form of shares of restricted stock or units payable in stock. In general, the restricted stock vests over a period of years following the date of grant and may be subject to the achievement within a specified period of critical corporate goals and strategic objectives established by the Compensation Committee. Thus, restricted shares are designed both to link executives’ interests with those of the Company’s shareholders as the shares’ value is based on the value of the Company’s common stock, to provide a long-term retention incentive for the vesting period as they generally have value regardless of stock price volatility and, in the case of awards subject to performance-based vesting requirements, to provide further incentives for executives to achieve goals considered critical to the Company’s success.

In determining the size of the Company’s long-term equity incentive awards, the Compensation Committee reviews competitive market data for similar positions in the Company’s peer companies, the executive officer’s performance history and/or potential for future responsibility and promotion, the chief executive officer’s recommendations (with respect to executives other than himself) and the value of existing vested and unvested outstanding equity awards. The relative weight given to each of these factors will vary from individual to individual at the Compensation Committee’s discretion and adjustments may be made as the Compensation Committee deems reasonable to attract candidates in the competitive environment for highly qualified employees in which the Company operates.

2012-2014 Performance Awards.    The Compensation Committee had previously granted equity awards to each of the named executive officers that would vest upon the Company’s achievement of certain performance goals, subject to the goal’s achievement by December 31, 2011. These 2009 awards expired on December 31, 2011 as the goals were not achieved. In connection with the expiration of these awards, the Compensation Committee granted new equity awards, effective January 3, 2012, with similar performance-based vesting requirements as outlined in detail below. (The Company refers to these awards as the “2012-2014 Performance Awards”). The Compensation Committee believed these awards at the grant levels identified below would provide executives an appropriate level of incentives to help achieve the performance goals noted below so as to maximize and restore shareholder value and to remain with the Company over a multi-year period.

Theperformance goals under the 2012-2014 Performance Awards are as follows:

(a)approval of marketing authorization application for PIXUVRI (“Pix MAA Approval”);

(b)approval of new drug application (“NDA”) for PIXUVRI (“Pix NDA Approval”);

(c)approval of NDA for OPAXIO (“Opaxio NDA Approval”);

(d)achievement of a market capitalization of $1.2 billion or greater based on the average of the closing prices of the Company’s common stock over a period of five consecutive days (the “Market Cap Goal”);

(e)achievement by the Company of fiscal year sales equal to or greater than $50,000,000 (the “$50M Sales Goal”);

(f)achievement by the Company of fiscal year sales equal to or greater than $100,000,000 (the “$100M Sales Goal”);

(g)achievement by the Company of break-even cash flow in any fiscal quarter (the “Cash Flow Break Even”); and

(h)achievement by the Company of earnings per share results in any fiscal year equal to or greater than $0.30 per share of Company common stock (the “EPS Goal”).

If one or more of the performance goals are timely achieved, an award recipient will be entitled to receive a number of shares of Company common stock (subject to the applicable share limits of the Company’s equity incentive plan) determined by multiplying (1) the award percentage corresponding to that particular performance goal by (2) the total number of outstanding shares of Company common stock, determined on a non-fully diluted basis, as of the date the Compensation Committee certifies that the particular performance goal has been achieved (subject to reduction for any restricted shares that vest upon attainment of that performance goal as described below). The award percentages corresponding to the various performance goals for each of the named executive officers are set forth in the following table:

   Performance Goals and Applicable Award Percentages 

Name

  Pix
MAA
Approval
  Pix
NDA
Approval
  Opaxio
NDA
Approval
  Market
Cap
Approval
  $50M
Sales
Goal
  $100M
Sales
Goal
  Cash Flow
Break Even
  EPS
Goal
 

James A. Bianco, M.D.

   0.15  0.45  0.085  0.75  0.3  0.6  0.3  0.124

Louis A. Bianco

   0.061  0.182  0.034  0.305  0.122  0.243  0.122  0.061

Daniel G. Eramian

   0.045  0.135  0.025  0.225  0.09  0.18  0.09  0.037

Craig W. Philips

   0.09  0.27  0.051  0.45  0.18  0.36  0.18  0.074

Jack W. Singer, M.D.

   0.061  0.182  0.034  0.305  0.122  0.243  0.122  0.061

A performance goal will not be considered achieved unless and until the date on which the Compensation Committee certifies that is has been achieved, and in each case the goal must be achieved on or before December 31, 2014. If a change in control of the Company occurs, and if the award recipient is then still employed by or is providing services to the Company or one of its subsidiaries, the award recipient will generally be entitled to receive the full award percentage with respect to any performance goal which was not otherwise achieved before the date of the change in control (as though that performance goal had been fully achieved as of the time of the change in control). With respect to the Market Cap Goal, however (to the extent the goal was not otherwise achieved before the date of the change in control), the recipient will receive the full number of shares allocated to the Market Cap Goal only if the Company’s market capitalization based on the price per share of Company common stock in the change in control transaction (or, if there is no such price in the transaction, the closing price of a share of Company common stock on the last trading day preceding the date of the change in control) equals or exceeds $1.2 billion. If the Company’s market capitalization is less than $1.2 billion on the date of the change in control, the recipient will not be entitled to receive or retain any of the shares allocated to the Market Cap Goal.

In approving the 2012-2014 Performance Awards for the named executive officers, the Compensation Committee determined that it would be appropriate to grant a portion of each award in the form of restricted shares issued on the effective date of grant. The Compensation Committee believed, particularly in light of the current economic environment, that the link between executives’ interests and shareholders’ interests would be further enhanced if the executives held restricted shares (as opposed to a right to receive shares only upon the vesting of the awards). These restricted shares will be forfeited back to the Company should the performance-based vesting requirements described above not be satisfied. In order to ensure that the restricted shares do not provide the executive the right to receive any shares beyond the payout levels described above, any restricted shares that vest in connection with the achievement of a performance goal on or before December 31, 2014 will reduce on a share-for-share basis the number of shares that would otherwise have been delivered under the award percentages indicated in the table above upon achievement of that performance goal. In furtherance of that intent, if the number of shares that would have been delivered under the applicable award percentage on achievement of a performance goal is less than the number of restricted shares that vest on achievement of that performance goal, a number of such restricted shares equal to the difference will be forfeited to the Company so that the executive retains no more shares related to that particular performance goal than the number of shares that would have otherwise been deliverable with respect to that goal under the applicable award percentage.

The grant levels for the 2012-2014 Performance Awards granted to each named executive officer were inherently subjective, determined by the Compensation Committee in its discretion taking into account its

general assessment of each executive’s overall responsibilities and contributions and the other factors noted under Long-Term Equity Incentive Compensation above.

On June 27, 2012, the Compensation Committee certified that the Company had received in May 2012 conditional marketing authorization from the European Commission for PIXUVRI as monotherapy for the treatment of adult patients with multiply relapsed or refractory aggressive non-Hodgkin B-cell lymphomas, that such approval constituted achievement of the “Pix MAA Approval” performance goal for purposes of the 2012-2014 Performance Awards described above and that, accordingly, the portions of those awards subject to achievement of the Pix MAA Approval performance goal vested as of the date of the Compensation Committee’s certification.

New-Hire Grants.    The Compensation Committee approved a grant of 100,000 shares of restricted stock to Dr. Benner in connection with his joining the Company in June 2012 and a grant of 100,000 shares of restricted stock to Dr. Plunkett in connection with his joining the Company in September 2012. The size of each grant was negotiated with the executive and determined by the Compensation Committee in its judgment based on competitive considerations.

Perquisites and Other Benefits.    The named executive officers receive certain perquisites and other benefits provided by or paid for by the Company, as identified in the footnotes to the “Summary Compensation Table” below. In addition, the Company maintains executive health programs for the benefit of the named executive officers, and these executives are also entitled to participate in the Company’s benefit programs which are available to all Company employees, including the Company’s 401(k) and employee stock purchase plans. Certain of the Company’s named executive officers occasionally use a chartered aircraft for business related travel (such business purpose is approved in advance by the Chair of the Board). When space was available, certain spouses or other family members accompanied the named executive officers on such trips. In those cases, there was no additional cost to the Company of having additional passengers on such flights.

The perquisites provided to a particular named executive officer are determined by the Compensation Committee in its judgment and are considered by the Compensation Committee when it makes its subjective assessment of the appropriateness of the executive’s overall compensation arrangements. The Company provides these perquisites and other benefits as a means of providing additional compensation to its named executive officers to help retain them and, in some cases, to make certain benefits available in a convenient and efficient manner in light of the demands and time constraints imposed on its executives.

Post-Termination Protection and Payments

The Company has entered into severance agreements with each of the named executive officers (other than Dr. Plunkett, who joined the Company in September 2012). The Compensation Committee believes these agreements are important in attracting and retaining key executive officers. Under these agreements, the executive would be entitled to severance benefits in the event of a termination of the executive’s employment by the Company without cause or by the executive for good reason. The Company has determined that it is appropriate to provide each named executive officer with severance benefits under these circumstances in light of his position with the Company and as part of his overall compensation package. The severance benefits for each named executive officer are generally determined as if he continued to remain employed by the Company for 18 months following his actual termination date (or two years in the case of Dr. Bianco). Because the Company believes that a termination by an executive for good reason (or constructive termination) is conceptually the same as an actual termination by the Company without cause, the Company believes it is appropriate to provide severance benefits following such a constructive termination of the executive’s employment. If a change in control of the Company occurs, outstanding equity awards, including awards held by the Company’s named executive officers, will generally become fully vested if they are not assumed by the successor entity.

During the past two years, the Compensation Committee has approved arrangements with each of the named executive officers that eliminate the executive’s right to be reimbursed for any excise taxes imposed on his

severance payments and any other payments under Sections 280G and 4999 of the Internal Revenue Code (generally referred to as “parachute payments”). In March 2011, the Company entered into a new employment agreement with Dr. Bianco that eliminated the right he had under his prior employment agreement to be reimbursed for any parachute payment excise taxes. In January 2012, the Company entered into award agreements with each of Mr. Bianco and Dr. Singer to evidence the 2012-2014 Performance Awards described above. Each of these agreements provides that the executive will not be entitled to reimbursement for any excise taxes imposed on parachute payments received from the Company, whether the payment is made pursuant to the executive’s 2012-2014 Performance Award or another Company plan or agreement.

For more information regarding these severance arrangements, please see “Potential Payments upon Termination or Change in Control” below.

Tax Deductibility of Pay

Section 162(m) of the Internal Revenue Code places a limit of $1,000,000 on the amount of compensation that the Company may deduct in any one year with respect to the Company’s chief executive officer and certain other executive officers. There is an exception to the $1,000,000 limitation for performance-based compensation meeting certain requirements. The Compensation Committee generally considers the limitations imposed by Section 162(m) among other factors in making its compensation decisions. However, the Compensation Committee reserves the right to design programs that recognize a full range of performance criteria important to the Company’s success, even where the compensation paid under such programs may not be deductible. The Compensation Committee will continue to monitor the tax and other consequences of the Company’s executive compensation program as part of its primary objective of ensuring that compensation paid to the Company’s executive officers is reasonable, performance-based and consistent with the Company’s goals and the goals of the Company’s shareholders.

Risk Considerations

The Compensation Committee has reviewed the Company’s compensation programs to determine whether they encourage unnecessary or excessive risk taking and has concluded that they do not. The Compensation Committee believes that the design of the Company’s annual cash and long-term equity incentives provides an effective and appropriate mix of incentives to help ensure the Company’s performance is focused on long-term stockholder value creation and does not encourage the taking of short-term risks at the expense of long-term results. While the Company’s performance-based cash bonuses are based on annual results, the amount of such bonuses are generally capped and represent only a portion of each individual’s overall total compensation opportunities. The Company also generally has discretion to reduce bonus payments (or pay no bonus) based on individual performance and any other factors it may determine to be appropriate in the circumstances.

As to the Company’s compensation arrangements for executive officers, the Compensation Committee takes risk into account in establishing and reviewing these arrangements and believes that the executive compensation arrangements do not encourage unnecessary or excessive risk-taking. Base salaries are fixed in amount and thus do not encourage risk-taking. While the Compensation Committee considers the achievement of specific financial and operating performance goals in determining the cash bonuses to be awarded to executives under the Company’s cash incentive program, the Compensation Committee determines the actual amount of each executive’s bonus based on multiple Company and individual performance criteria as described above. The Compensation Committee believes that the annual incentive program appropriately balances risk and the desire to focus executives on specific annual goals important to the Company’s success, and that it does not encourage unnecessary or excessive risk taking. Finally, a significant portion of the compensation provided to the Company’s executive officers is in the form of equity awards that further align executives’ interests with those of shareholders. The Compensation Committee believes that these awards do not encourage unnecessary or excessive risk-taking since the ultimate value of the awards is tied to the Company’s stock price, and since grants are generally subject to long-term vesting schedules to help ensure that executives always have significant value tied to long-term stock price performance.

Say-on-Pay Vote

At the Annual Meeting held in November 2011, shareholders had the opportunity to cast an advisory vote on the compensation paid to the Company’s named executive officers as disclosed in the proxy statement. The proposal to approve the executives’ compensation was approved by approximately 77% of the total number of votes actually cast (disregarding abstentions and broker non-votes). The Compensation Committee, which is responsible for designing and administering the Company’s executive compensation program, believes this result affirms shareholders’ support of the Company’s approach to executive compensation. Accordingly, the Company continued its approach to executive compensation in 2011 and 2012, and its emphasis on performance-based compensation in particular, by implementing a long-term equity incentive program for 2012-2014 that is similar in structure to the 2009-2011 program. In order to help conform the program to best practices, the Compensation Committee also determined to eliminate the executives’ rights to be reimbursed for parachute payment excise taxes as noted above.

Summary

The Compensation Committee believes that the Company’s compensation philosophy and programs are designed to foster a performance-oriented culture that aligns employees’ interests with those of the Company’s shareholders. The Compensation Committee believes that the compensation of the Company’s executives is both appropriate and responsive to the goal of improving shareholder value.

The following “Compensation Committee Report” and related disclosure shall not be deemed incorporated by reference by any general statement incorporating this Annual Report on Form 10-K into any filing under the Securities Act of 1933, as amended, or the Securities Act, or under the Exchange Act, except to the extent that the Company specifically incorporates this information by reference, and shall not otherwise be deemed filed under the Securities Act or the Exchange Act.

Compensation Committee Report

The Compensation Committee reviewed this Compensation Discussion and Analysis and discussed its contents with Company management. Based on this review and discussions, the Compensation Committee has recommended to the Board that this Compensation Discussion and Analysis be included in this Annual Report on Form 10-K.

Respectfully submitted by the Compensation Committee:

Frederick W. Telling, Ph.D., Chair

Richard L. Love

Mary O. Mundinger, DrPH

Phillip M. Nudelman, Ph.D.

Compensation Committee Interlocks and Insider Participation

The directors listed at the end of the Compensation Committee Report above were each members of the Compensation Committee during all of fiscal year 2012. No director who served on the Compensation Committee during fiscal year 2012 is or has been an executive officer of the Company or had any relationships requiring disclosure by the Company under the SEC’s rules requiring disclosure of certain relationships and related-party transactions. None of the Company’s executive officers served as a director or a member of a compensation committee (or other committee serving an equivalent function) of any other entity, any executive officer of which served as a member of the Board or the Compensation Committee during fiscal year 2012.

EXECUTIVE COMPENSATION

Summary Compensation Table—Fiscal Years 2010-2012

The following table sets forth information concerning compensation for fiscal years 2010, 2011 and 2012 for services rendered to the Company by the Chief Executive Officer, or the CEO, the Executive Vice President, Finance and Administration, and the Company’s next three most highly compensated executive officers in office as of December 31, 2012, as well as two other individuals who served as executive officers of the Company during fiscal year 2012. Collectively, these are the “named executive officers.”

Name and Principal Position

 Year  Salary
($)
  Bonus
($)(1)
  Stock
Awards
($)(2)(3)
  Option
Awards
($)
  Non-Equity
Incentive Plan
Compensation
($)
  All Other
Compensation
($)(4)
  Total($) 

James A. Bianco, M.D.

  2012    650,000    552,500    1,318,393            292,643    2,813,536  

Chief Executive Officer and

  2011    650,000    767,500    2,891,120            287,018    4,595,638  

President(5)

  2010    650,000    585,000    —              125,967    1,360,967  

Louis A. Bianco

  2012    330,000    198,500(6)   536,147            34,293    1,098,940  

Executive Vice President

  2011    330,000    242,550    675,836            32,928    1,281,314  

Finance and Administration

  2010    330,000    247,500    —              10,009    587,509  

Jack W. Singer, M.D.

  2012    340,000    203,000(6)   536,147            42,579    1,121,726  

Executive Vice President

  2011    340,000    204,000    649,836            44,107    1,237,943  

Global Medical Affairs and Translational Medicine

  2010    340,000    212,500    —              30,475    582,975  

Steven E. Benner, M.D.

  2012    210,218    142,000(7)   345,000            3,153    700,371  

Executive Vice President

        

Chief Medical Officer

        

Matthew Plunkett, Ph.D.

  2012    106,041    62,500(7)   153,000            —      321,541  

Executive Vice President

        

Corporate Development

        

Craig W. Philips(8)

  2012    219,296    100,500    791,036            216,892    1,327,724  

Former President

  2011    402,000    341,700    1,216,922            39,634    2,000,256  
  2010    402,000    281,400    —              16,125    699,525  

Daniel G. Eramian(9)

  2012    275,625    37,800    395,518            36,424    745,367  

Former Executive Vice President

  2011    315,000    226,800    649,836            11,768    1,203,404  

Corporate Communications

  2010    315,000    220,500    —              250    535,750  

(1)Please see the Compensation Discussion and Analysis above for a description of the cash incentive program for the named executive officers for fiscal 2012.
(2)The amounts reported in the “Stock Awards” column of the table above for each fiscal year reflect the grant date fair value of the stock awards granted to the named executive officers during the fiscal year. These values have been determined under generally accepted accounting principles used to calculate the value of equity awards for purposes of the Company’s financial statements. For a discussion of the assumptions and methodologies used to calculate the amounts reported above, please see the discussion of equity awards contained in Note 13 (Share-Based Compensation) to the Company’s Consolidated Financial Statements, included as part of this Form 10-K.

(3)The amounts reported in the “Stock Awards” column of the table above for fiscal 2012 for each of the named executive officers (other than Dr. Benner and Dr. Plunkett) include the grant-date fair value of the long-term performance awards granted to these executives in January 2012 based on the probable outcome (as of the grant date) of the performance-based conditions applicable to the awards, as determined under generally accepted accounting principles. The following table presents the aggregate grant-date fair value of these awards included in the “Stock Awards” column for fiscal 2012 for these executives and the aggregate grant-date fair value of these awards assuming that the highest level of performance conditions will be achieved.

   2012 Performance Awards 

Name

  Aggregate Grant
Date Fair Value
(Based on
Probable
Outcome)
($)
   Aggregate Grant
Date Fair Value
(Based on
Maximum
Performance)
($)
 

James A. Bianco, M.D.

   1,318,393     7,472,740  

Louis A. Bianco

   536,147     3,061,916  

Jack W. Singer, M.D.

   536,147     3,061,916  

Craig W. Philips

   791,036     4,482,488  

Daniel G. Eramian

   395,518     2,239,669  

(4)The following table provides detail on the amounts reported in the “All Other Compensation” column of the table above for each named executive officer:

Name

  Executive Health
Benefits ($)
   Life
Insurance
Premiums($)
   401(k)
Match
($)
   Other
Personal
Benefits($)(a)
  Severance($)   Total ($) 

James A. Bianco, M.D.

   143,688     30,785     —       118,170(b)   —       292,643  

Louis A. Bianco

   17,378     9,532     3,750     3,633(c)   —       34,293  

Jack W. Singer, M.D.

   30,699     —       3,750     8,130(d)   —       42,579  

Steven E. Benner, M.D.

   —       —       3,153     —      —       3,153  

Matthew Plunkett, Ph.D.

   —       —       —       —      —       —    

Craig W. Philips

   9,745     —       3,289     5,224(e)   198,634     216,892  

Daniel G. Eramian

   2,426     —       —       1,912(f)   32,086     36,424  

(a)Certain named executive officers were accompanied by spouses or other family members on trips using chartered aircraft where the use of the chartered aircraft was primarily for business purposes. In those cases, there was no incremental cost to the Company of having additional passengers on the chartered aircraft, and as a result, no amount is reflected in this table with respect to this benefit.
(b)This amount includes $62,161 for family members’ travel on commercial aircraft, $25,500 for personal travel expenses, $3,245 for tax preparation fees, $4,901 for health club dues, $20,087 for security expenses, $1,122 for residential services and $1,154 for miscellaneous expenses.
(c)This amount includes $1,860 for tax preparation fees, $1,323 for security expenses, and $450 for miscellaneous expenses.
(d)This amount includes $4,125 for tax preparation fees, $3,235 for security expenses, and $770 for telecommunications expenses.
(e)This amount includes $4,906 for automobile allowance and $318 for security expenses.
(f)This amount includes $765 for tax preparation fees and $1,147 for security expenses.

(5)Dr. Bianco was appointed President of the Company on July 25, 2012.
(6)These amounts include a special bonus of $50,000 to each of Mr. Bianco and Dr. Singer in January 2012 to recognize their 20 years of continuous service with the Company since its inception.
(7)These amounts include signing and relocation bonuses for Dr. Benner for a total of $85,000 and a signing bonus for Dr. Plunkett of $30,000.

(8)Mr. Philips resigned as President of the Company on June 16, 2012, effective as of July 16, 2012. Please see “Potential Payments Upon Termination or Change in Control” below for a description of the separation agreement entered into by Mr. Philips and the Company in connection with his termination.
(9)Mr. Eramian’s employment with the Company terminated effective November 15, 2012. Please see “Potential Payments Upon Termination or Change in Control” below for a description of the separation agreement entered into by Mr. Eramian and the Company in connection with his termination.

Compensation of Named Executive Officers

The Summary Compensation Table above quantifies the value of the different forms of compensation earned by or awarded to the Company’s named executive officers for the fiscal years indicated above. The primary elements of each named executive officer’s total compensation reported in the table are base salary, an annual bonus, and long-term equity incentives consisting of awards of restricted stock and restricted stock units. Named executive officers also received the other benefits listed in the “All Other Compensation” column of the Summary Compensation Table, as further described in the footnotes to the table.

The Summary Compensation Table should be read in conjunction with the tables and narrative descriptions that follow. The Grants of Plan-Based Awards table provides information regarding the incentives awarded to the named executive officers in fiscal 2012. The Outstanding Equity Awards at Fiscal Year-End and Option Exercises and Stock Vested tables provide further information on the named executive officers’ potential realizable value and actual value realized with respect to their equity awards. The “Potential Payments upon Termination or Change in Control” section provides information on the benefits the named executive officers may be entitled to receive in connection with certain terminations of their employment and/or a change in control of the Company.

Description of Employment Agreements—Cash Compensation

In March 2011, the Company entered into an employment agreement with Dr. Bianco that replaced his original employment agreement entered into in 2008. The employment agreement has a two-year term, with automatic one-year renewals unless either party gives notice that the term will not be extended. The agreement provides that Dr. Bianco will receive an initial annualized base salary of $650,000, subject to review by the Compensation Committee. Based on its review, the Compensation Committee may increase (but not reduce) the base salary level. The agreement also provides for annual bonuses for Dr. Bianco with a target annual bonus of at least 50% of his base salary and that his annual bonus may be up to 125% of his base salary if certain “stretch” performance goals established by the Compensation Committee for the applicable year are achieved. The agreement also provides for Dr. Bianco to participate in the Company’s usual benefit programs for senior executives, payment by the Company of disability insurance premiums and premiums for universal life insurance with a coverage amount of not less than $5,000,000 (up to an aggregate annual limit for such premiums of $50,000, subject to adjustment) and certain other personal benefits set forth in the agreement.

In June 2012, the Company entered into an offer letter with Dr. Benner. The letter does not have a specified term and provides for Dr. Benner to receive an initial annualized base salary of $380,000. Dr. Benner is eligible to receive an annual discretionary bonus, with a target bonus of 30% of base salary and a maximum bonus of 75% of base salary, and to participate in the benefit programs offered by the Company. The letter also provides for Dr. Benner to receive a signing bonus of $50,000 and a relocation allowance of $35,000, each of which must be repaid to the Company if Dr. Benner voluntarily terminates his employment within one year after his hire date. In addition, the letter provides for Dr. Benner to receive a grant of restricted shares as described below under “Grants of Plan-Based Awards—Fiscal 2012” and to be eligible for a 2012-2014 Performance Award grant.

In July 2012, the Company entered into an offer letter with Dr. Plunkett. The letter does not have a specified term and provides for Dr. Plunkett to receive an initial annualized base salary of $325,000. Dr. Plunkett is eligible to receive an annual discretionary bonus, with a target bonus of 30% of base salary and a maximum

bonus of 75% of base salary, and to participate in the benefit programs offered by the Company. The letter also provides for Dr. Plunkett to receive a signing bonus of $30,000, which must be repaid to the Company if Dr. Plunkett voluntarily terminates his employment within one year after his hire date. In addition, the letter provides for Dr. Plunkett to receive a grant of restricted shares as described below under “Grants of Plan-Based Awards—Fiscal 2012.”

Provisions of each of the foregoing agreements relating to outstanding equity incentive awards and post-termination of employment benefits are discussed below under the applicable sections of this Annual Report on Form 10-K.

Grants of Plan-Based Awards—Fiscal 2012

The following table presents information regarding the equity awards granted to the named executive officers in fiscal 2012.

Name/Award Type

 Approval
Date
  Grant
Date
  Estimated Future
Payouts
Under Equity

Incentive Plan Awards(1)
  All
Other
Stock
Awards:
Number
of

Shares
of
Stock
or
Units
(#)
  All
Other
Option
Awards:
Number

of
Securities
Underlying
Options
(#)
  Exercise
or Base
Price

of
Option
Awards
($/Sh)
  Grant
Date
Fair
Value

of
Stock
and
Option
Awards
($)(2)
 
   Threshold
(#)
  Target
(#)
  Maximum
(#)
     

James A. Bianco, M.D.

         

Performance Award(3)

  11/22/11    1/3/12    —      60,920    —      —      —      —      —    

Performance Award(4)

  11/22/11    1/3/12    —      182,761    —      —      —      —      —    

Performance Award(5)

  11/22/11    1/3/12    —      34,521    —      —      —      —      —    

Performance Award(6)

  11/22/11    1/3/12    —      304,601    —      —      —      —      1,318,393  

Performance Award(7)

  11/22/11    1/3/12    —      121,841    —      —      —      —      —    

Performance Award(8)

  11/22/11    1/3/12    —      243,681    —      —      —      —      —    

Performance Award(9)

  11/22/11    1/3/12    —      121,841    —      —      —      —      —    

Performance Award(10)

  11/22/11    1/3/12    —      50,361    —      —      —      —      —    

Louis A. Bianco

         

Performance Award(3)

  11/22/11    1/3/12    —      24,774    —      —      —      —      —    

Performance Award(4)

  11/22/11    1/3/12    —      73,917    —      —      —      —      —    

Performance Award(5)

  11/22/11    1/3/12    —      13,809    —      —      —      —      —    

Performance Award(6)

  11/22/11    1/3/12    —      123,871    —      —      —      —      536,147  

Performance Award(7)

  11/22/11    1/3/12    —      49,548    —      —      —      —      —    

Performance Award(8)

  11/22/11    1/3/12    —      98,691    —      —      —      —      —    

Performance Award(9)

  11/22/11    1/3/12    —      49,548    —      —      —      —      —    

Performance Award(10)

  11/22/11    1/3/12    —      24,774    —      —      —      —      —    

Jack W. Singer

         

Performance Award(3)

  11/22/11    1/3/12    —      24,774    —      —      —      —      —    

Performance Award(4)

  11/22/11    1/3/12    —      73,917    —      —      —      —      —    

Performance Award(5)

  11/22/11    1/3/12    —      13,809    —      —      —      —      —    

Performance Award(6)

  11/22/11    1/3/12    —      123,871    —      —      —      —      536,147  

Performance Award(7)

  11/22/11    1/3/12    —      49,548    —      —      —      —      —    

Performance Award(8)

  11/22/11    1/3/12    —      98,691    —      —      —      —      —    

Performance Award(9)

  11/22/11    1/3/12    —      49,548    —      —      —      —      —    

Performance Award(10)

  11/22/11    1/3/12    —      24,774    —      —      —      —      —    

Steven E. Benner, M.D.

         

Restricted Stock

  6/13/12    6/13/12    —      —      —      100,000    —      —      345,000  

Matthew Plunkett, Ph.D.

         

Restricted Stock

  10/16/12    10/16/12    —      —      —      100,000    —      —      153,000  

Name/Award Type

 Approval
Date
  Grant
Date
  Estimated Future
Payouts
Under Equity

Incentive Plan Awards(1)
  All
Other
Stock
Awards:
Number
of

Shares of
Stock or
Units
(#)
  All Other
Option
Awards:
Number

of
Securities
Underlying
Options
(#)
  Exercise
or Base
Price

of
Option
Awards
($/Sh)
  Grant
Date
Fair
Value

of
Stock
and
Option
Awards
($)(2)
 
   Threshold
(#)
  Target
(#)
  Maximum
(#)
     

Craig W. Philips

         

Performance Award(3)

  11/22/11    1/3/12    —      36,552    —      —      —      —      —    

Performance Award(4)

  11/22/11    1/3/12    —      109,656    —      —      —      —      —    

Performance Award(5)

  11/22/11    1/3/12    —      20,713    —      —      —      —      —    

Performance Award(6)

  11/22/11    1/3/12    —      182,761    —      —      —      —      791,036  

Performance Award(7)

  11/22/11    1/3/12    —      73,104    —      —      —      —      —    

Performance Award(8)

  11/22/11    1/3/12    —      146,209    —      —      —      —      —    

Performance Award(9)

  11/22/11    1/3/12    —      73,104    —      —      —      —      —    

Performance Award(10)

  11/22/11    1/3/12    —      30,054    —      —      —      —      —    

Daniel G. Eramian

         

Performance Award(3)

  11/22/11    1/3/12    —      18,276    —      —      —      —      —    

Performance Award(4)

  11/22/11    1/3/12    —      54,828    —      —      —      —      —    

Performance Award(5)

  11/22/11    1/3/12    —      10,153    —      —      —      —      —    

Performance Award(6)

  11/22/11    1/3/12    —      91,380    —      —      —      —      395,518  

Performance Award(7)

  11/22/11    1/3/12    —      36,552    —      —      —      —      —    

Performance Award(8)

  11/22/11    1/3/12    —      73,104    —      —      —      —      —    

Performance Award(9)

  11/22/11    1/3/12    —      36,552    —      —      —      —      —    

Performance Award(10)

  11/22/11    1/3/12    —      15,027    —      —      —      —      —    

(1)This column reflects the 2012-2014 Performance Awards that are subject to achievement by the Company of certain performance goals (identified in the footnotes below) on or before December 31, 2014. As described in the Compensation Discussion and Analysis above, each of these awards consists of a restricted stock component and a restricted stock unit component, with the number of shares that will vest or be payable in shares of the Company’s common stock, as applicable, upon achievement of the related performance goal to be determined by multiplying the payout percentage that has been assigned by the Compensation Committee to that goal for purposes of the named executive officer’s award by the number of shares of the Company’s common stock issued and outstanding at the time the Compensation Committee certifies that that particular goal has been achieved. For each award, the “Target” column reflects the number of shares that would vest or be issued under each award upon timely achievement of each performance goal based on the applicable payout percentages and the number of shares of the Company’s common stock issued and outstanding on January 3, 2012. The actual number of shares, if any, that will vest or be issued for each award upon timely achievement of the related performance goal may be different from the number reported in the table above depending on the number of shares of the Company’s common stock issued and outstanding at the time the Compensation Committee certifies that the goal has been achieved.
(2)The amounts reported in this column reflect the grant date fair value of these awards as determined under the generally accepted accounting principles used to calculate the value of equity awards for purposes of the Company’s financial statements. For a discussion of the assumptions and methodologies used to value the awards reported in this column, please see footnote (2) to the Summary Compensation Table. With respect to equity incentive plan awards, this column reflects the grant date fair value of such awards based on the probable outcome (as of the grant date) of the performance-based conditions applicable to the awards, as determined under generally accepted accounting principles.
(3)The vesting of these awards was subject to the Company’s obtaining MAA approval of PIXUVRI on or before December 31, 2014. As noted in the Compensation Discussion and Analysis above, the Compensation Committee certified on June 27, 2012 that this performance goal had been achieved and that, accordingly, these awards vested as of the date of the Compensation Committee’s certification. The number of shares that vested in connection with the achievement of this goal is included in the “Option Exercises and Stock Vested—Fiscal Year 2012” table below.
(4)The vesting of these awards is subject to the Company’s obtaining NDA approval of PIXUVRI on or before December 31, 2014.
(5)The vesting of these awards is subject to the Company’s obtaining NDA approval of OPAXIO on or before December 31, 2014.
(6)The vesting of these awards is subject to the Company’s achievement on or before December 31, 2014 of a market capitalization of $1.2 billion or greater (based on the average of the closing prices of the Company’s common stock over a period of five consecutive days).
(7)The vesting of these awards is subject to achievement by the Company of fiscal year sales equal to or greater than $50 million on or before December 31, 2014.

(8)The vesting of these awards is subject to achievement by the Company of fiscal year sales equal to or greater than $100 million on or before December 31, 2014.
(9)The vesting of these awards is subject to achievement by the Company of break-even cash flow in any fiscal quarter before December 31, 2014.
(10)The vesting of these awards is subject to achievement by the Company of earnings per share results in any fiscal year equal to or greater than $0.30 per share of Company common stock on or before December 31, 2014.

Each of the awards reported in the above table was granted under, and is subject to, the terms of the Company’s 2007 Equity Incentive Plan, or the 2007 Plan. The 2007 Plan is administered by the Compensation Committee. The Compensation Committee has authority to interpret the plan provisions and make all required determinations under the plan. Awards granted under the plan are generally only transferable to a beneficiary of a named executive officer upon his death or, in certain cases, to family members for tax or estate planning purposes.

Under the terms of the 2007 Plan, if there is a change in control of the Company, each named executive officer’s outstanding awards granted under the plan will generally become fully vested and, in the case of options, exercisable, unless the Compensation Committee provides for the substitution, assumption, exchange or other continuation of the outstanding awards. Any options that become vested in connection with a change in control generally must be exercised prior to the change in control, or they will be cancelled in exchange for the right to receive a cash payment in connection with the change in control transaction. If the Compensation Committee provides for awards to be assumed or otherwise continue following the change in control, the award will become fully vested if the holder’s employment is terminated by the successor corporation or one of its affiliates within 12 months following the change in control for any reason other than misconduct.

In addition, each named executive officer may be entitled to accelerated vesting of his outstanding equity-based awards upon certain terminations of his employment with the Company and/or a change in control of the Company. The terms of this accelerated vesting are described in this section and in the “Potential Payments Upon a Termination or Change in Control” section below.

Restricted Stock.    The awards granted to Dr. Benner and Dr. Plunkett reported in the table above represent grants of restricted stock to each of these executive officers. The vesting schedules for these awards is described in the footnotes to the Outstanding Equity Awards at Fiscal 2012 Year-End Table below. Prior to the time the shares become vested, the named executive officer generally does not have the right to dispose of the restricted shares, but does have the right to vote and receive dividends (if any) paid by the Company in respect of the restricted shares.

Performance Awards.    The awards granted in January 2012 reported in the table above represent the 2012-2014 Performance Awards. These awards will be payable in fully vested shares of Company common stock if the Company achieves certain financial and operational performance goals by December 31, 2014. See the Compensation Discussion and Analysis above for a description of the performance and other vesting conditions applicable to the awards and the footnotes to the table above for the number of shares that would be payable upon achievement of the related performance goal. The named executive officer does not have the right to vote or dispose of the awards or any other shareholder rights with respect to the awards (except the portions of the awards granted in restricted stock have voting and dividend rights).

Outstanding Equity Awards at Fiscal 2012 Year-End

The following table presents information regarding the outstanding equity awards held by each of the Company’s named executive officers as of December 31, 2012, including the vesting dates for the portions of these awards that had not vested as of that date.

     Option Awards  Stock Awards 

Name/Award Type

 Grant
Date
  Number of
Shares
Underlying
Unexercised
Options (#)
Exercisable
  Number of
Securities
Underlying
Unexercised
Options (#)
Unexercisable
  Option
Exercise
Price
($)
  Option
Expiration
Date
  Number
of
Shares
or
Units
of
Stock
That
Have
Not
Vested
(#)
  Market
Value
of
Shares
or
Units
of
Stock
That
Have
Not
Vested
($)(1)
  Equity
Incentive
Plan
Awards;
Number
of
Unearned
Shares,
Units or
Other
Rights
That
Have Not
Vested
(#)(2)
  Equity
Incentive
Plan
Awards;
Market
or Payout
Value of
Unearned
Shares,
Units or
Rights
That
Have Not
Vested
($)(1)
 

James A. Bianco, M.D.

         

CTI Option

  12/11/03    103    —      9,720.00    12/11/13    —      —      —      —    

CTI Option

  12/14/05    208    —      2,832.00    12/14/15    —      —      —      —    

CTI Option

  1/18/07    200    —      2,040.00    1/18/17    —      —      —      —    

CTI Option

  12/27/07    333    —      567.00    12/27/17    —      —      —      —    

CTI Restricted Stock

  11/29/11    —      —      —      —      224,750(3)   292,175    —      —    

CTI Performance Award(4)

  1/3/12    —      —      —  ��   —      —      —      494,207    642,469  

CTI Performance Award(5)

  1/3/12    —      —      —      —      —      —      93,350    121,355  

CTI Performance Award(6)

  1/3/12    —      —      —      —      —      —      823,678    1,070,782  

CTI Performance Award(7)

  1/3/12    —      —      —      —      —      —      329,471    428,313  

CTI Performance Award(8)

  1/3/12    —      —      —      —      —      —      658,942    856,625  

CTI Performance Award(9)

  1/3/12    —      —      —      —      —      —      329,471    428,313  

CTI Performance Award(10)

  1/3/12    —      —      —      —      —      —      136,181    177,036  

Louis A. Bianco

         

CTI Option

  12/11/03    49    —      9,720.00    12/11/13    —      —      —      —    

CTI Option

  7/14/05    125    —      3,336.00    7/14/15    —      —      —      —    

CTI Option

  12/14/05    100    —      2,832.00    12/14/15    —      —      —      —    

CTI Option

  6/22/06    25    —      1,704.00    6/22/16    —      —      —      —    

CTI Option

  1/18/07    58    —      2,040.00    1/18/17    —      —      —      —    

CTI Option

  12/27/07    120    —      567.00    12/27/17    —      —      —      —    

CTI Restricted Stock

  11/29/11    —      —      —      —      67,424(3)   87,651    —      —    

CTI Performance Award(4)

  1/3/12    —      —      —      —      —      —      199,879    259,843  

CTI Performance Award(5)

  1/3/12    —      —      —      —      —      —      37,340    48,542  

CTI Performance Award(6)

  1/3/12    —      —      —      —      —      —      334,962    435,451  

CTI Performance Award(7)

  1/3/12    —      —      —      —      —      —      133,985    174,180  

CTI Performance Award(8)

  1/3/12    —      —      —      —      —      —      266,872    346,933  

CTI Performance Award(9)

  1/3/12    —      —      —      —      —      —      133,985    174,180  

CTI Performance Award(10)

  1/3/12    —      —      —      —      —      —      66,992    87,090  

Aequus Restricted Stock

  2/11/11    —      —      —       150,000(11)   19,500    —      —    

Jack W. Singer

         

CTI Option

  12/11/03    62    —      9,720.00    12/11/13    —      —      —      —    

CTI Option

  7/14/05    125    —      3,336.00    7/14/15    —      —      —      —    

CTI Option

  12/14/05    100    —      2,832.00    12/14/15    —      —      —      —    

CTI Option

  6/22/06    25    —      1,704.00    6/22/16    —      —      —      —    

CTI Option

  1/18/07    58    —      2,040.00    1/18/17    —      —      —      —    

CTI Option

  12/27/07    120    —      567.00    12/27/17    —      —      —      —    

CTI Restricted Stock

  11/29/11    —      —      —      —      67,424(3)   87,651    —      —    

CTI Performance Award(4)

  1/3/12    —      —      —      —      —      —      199,879    259,843  

CTI Performance Award(5)

  1/3/12    —      —      —      —      —      —      37,340    48,542  

CTI Performance Award(6)

  1/3/12    —      —      —      —      —      —      334,962    435,451  

CTI Performance Award(7)

  1/3/12    —      —      —      —      —      —      133,985    174,180  

CTI Performance Award(8)

  1/3/12    —      —      —      —      —      —      266,872    346,933  

CTI Performance Award(9)

  1/3/12    —      —      —      —      —      —      133,985    174,180  

CTI Performance Award(10)

  1/3/12    —      —      —      —      —      —      66,992    87,090  

Steven E. Benner, M.D.

         

CTI Restricted Stock

  6/13/12    —      —      —       100,000(12)   130,000    —      —    

     Option Awards  Stock Awards 

Name/Award Type

 Grant
Date
  Number of
Shares
Underlying
Unexercised
Options (#)
Exercisable
  Number of
Securities
Underlying
Unexercised
Options (#)
Unexercisable
  Option
Exercise
Price
($)
  Option
Expiration
Date
  Number
of
Shares
or
Units
of
Stock
That
Have
Not
Vested
(#)
  Market
Value
of
Shares
or
Units
of
Stock
That
Have
Not
Vested
($)(1)
  Equity
Incentive
Plan
Awards;
Number
of
Unearned
Shares,
Units or
Other
Rights
That
Have Not
Vested
(#)(2)
  Equity
Incentive
Plan
Awards;
Market
or Payout
Value of
Unearned
Shares,
Units or
Rights
That
Have Not
Vested
($)(1)
 

Matthew Plunkett, Ph.D.

         

CTI Restricted Stock

  10/16/12    —      —      —       100,000(13)   130,000    —      —    

Craig W. Philips

  —      —      —      —       —      —      —      —    

Daniel G. Eramian

         

CTI Option

  3/31/06    79    —      2,292.00    2/15/13    —      —      —      —    

CTI Option

  6/22/06    25    —      1,704.00    2/15/13    —      —      —      —    

CTI Option

  1/18/07    50    —      2,040.00    2/15/13    —      —      —      —    

CTI Option

  12/27/07    120    —      567.00    2/15/13    —      —      —      —    

CTI Restricted Stock

  11/29/11    —      —      —      —      33,712(14)   43,826    —      —    

(1)The dollar amounts shown in these columns for awards granted by the Company are determined by multiplying the applicable number of shares or units by $1.30 (the closing price of the Company’s common stock on the last trading day of fiscal 2012) or, in the case of the shares granted by Aequus, by multiplying the applicable number of shares by $0.13 (the fair market value of Aequus’ common stock as of December 31, 2012).
(2)The entries in this column reflect the 2012-2014 Performance Awards that are subject to achievement by the Company of certain performance goals (identified in the footnotes below) on or before December 31, 2014. As described in the Compensation Discussion and Analysis above, each of these awards consists of a restricted stock component and a restricted stock unit component, with the number of shares that will vest or be payable in shares of the Company’s common stock, as applicable, upon achievement of the related performance goal to be determined by multiplying the payout percentage that has been assigned by the Compensation Committee to that goal for purposes of the named executive officer’s award by the number of shares of the Company’s common stock issued and outstanding at the time the Compensation Committee certifies that that particular goal has been achieved. The table above reports the aggregate number of shares that would be vest or be issued under each award upon timely achievement of each performance goal based on the applicable payout percentages and the number of shares of the Company’s common stock issued and outstanding on December 31, 2012. The actual number of shares, if any, that will vest or be issued for each award upon timely achievement of the related performance goal may be different from the number reported in the table above depending on the number of shares of the Company’s common stock issued and outstanding at the time the Compensation Committee certifies that the goal has been achieved.
(3)These awards were amended during 2012 to provide that one-half of these shares, which were originally scheduled to vest on November 29, 2012, will vest on the earlier of March 31, 2013 or two days after the filing of this Annual Report on Form 10-K. The remaining one-half of these shares are scheduled to vest on May 29, 2013, with vesting in each case being subject to continued service through the applicable vesting date.
(4)The vesting of these awards is subject to the Company’s obtaining NDA approval of PIXUVRI on or before December 31, 2014.
(5)The vesting of these awards is subject to the Company’s obtaining NDA approval of OPAXIO on or before December 31, 2014.
(6)The vesting of these awards is subject to the Company’s achievement on or before December 31, 2014 of a market capitalization of $1.2 billion or greater (based on the average of the closing prices of the Company’s common stock over a period of five consecutive days).
(7)The vesting of these awards is subject to achievement by the Company of fiscal year sales equal to or greater than $50 million on or before December 31, 2014.
(8)The vesting of these awards is subject to achievement by the Company of fiscal year sales equal to or greater than $100 million on or before December 31, 2014.
(9)The vesting of these awards is subject to achievement by the Company of break-even cash flow in any fiscal quarter before December 31, 2014.
(10)The vesting of these awards is subject to achievement by the Company of earnings per share results in any fiscal year equal to or greater than $0.30 per share of Company common stock on or before December 31, 2014.
(11)These shares were granted to Mr. Bianco by Aequus and vest as to one-third of these shares on each of February 11, 2013, February 11, 2014 and February 11, 2015, subject to continued service with Aequus.
(12)This award was amended during 2012 to provide that one-third of these shares, which were originally scheduled to vest on December 13, 2012, will vest on the earlier of March 31, 2013 or two days after the filing of this Annual Report on Form 10-K. The remaining two-thirds of these shares are scheduled to vest on December 13, 2013, with vesting in each case being subject to continued service through the applicable vesting date.
(13)One-third of these shares will vest on each of September 4, 2013, September 4, 2014 and September 4, 2015, subject to continued service through the applicable vesting date.
(14)Pursuant to the separation agreement entered into by Mr. Eramian and the Company in January 2013, these shares became vested on January 12, 2013.

Option Exercises and Stock Vested—Fiscal Year 2012

The following table presents information regarding the vesting during fiscal year 2012 of stock awards granted by the Company to the named executive officers. No executive officer exercised any stock options granted by the Company during fiscal 2012.

Name

  Option Awards   Stock Awards 
  Number of Shares
Acquired on
Exercise (#)
   Value Realized
on Exercise
($)
   Number of Shares
Acquired on
Vesting (#)
   Value Realized
on Vesting
($)(1)
 

James A. Bianco, M.D.

             228,504     742,430  

Louis A. Bianco

             68,160     191,493  

Jack W. Singer, M.D.

             68,160     191,493  

Steven E. Benner, M.D.

             —       —    

Matthew Plunkett, Ph.D.

             —       —    

Craig W. Philips

             116,268     308,995  

Daniel G. Eramian

             60,218     168,144  

(1)The dollar amounts shown in this column for stock awards are determined by multiplying the number of shares or units, as applicable, that vested by the per-share closing price of the Company’s common stock on the vesting date.

Potential Payments upon Termination or Change in Control

The following section describes the benefits that may become payable to the named executive officers in connection with a termination of their employment and/or a change in control of the Company. In addition, as noted in the “Compensation Discussion and Analysis” above, the 2012-2014 Performance Awards granted to the named executive officers, which were effective as of January 3, 2012, would generally vest if a change in control of the Company occurs (subject to certain limitations with respect to the Market Cap Goal as described above).

James A. Bianco, M.D.    As described above, Dr. Bianco entered into a new employment agreement with the Company in March 2011. Pursuant to his employment agreement, if Dr. Bianco’s employment is terminated by the Company without cause or if he resigns for good reason (as the terms “cause” and “good reason” are defined in the agreement), he will receive the following severance benefits: (i) cash severance equal to two years of his base salary, (ii) reimbursement for up to two years by the Company for COBRA premiums to continue his medical coverage and that of his eligible dependents and (iii) continued payment for up to two years by the Company of premiums to maintain life insurance paid for by the Company at the time of his termination. In addition, Dr. Bianco would be entitled to accelerated vesting of all of his then-outstanding and unvested stock-based compensation, and his outstanding stock options would remain exercisable for a period of two years following the severance date. In the event of a change of control of the Company, if Dr. Bianco is terminated without cause or resigns for good reason, he will receive cash severance in the form of a lump sum payment equal to two years of his base salary, plus an amount equal to the greater of the average of his three prior years’ bonuses or thirty percent of his base salary, as well as the benefits described in clauses (ii) and (iii) above. Dr. Bianco’s right to receive these severance benefits is conditioned upon his executing a release of claims in favor of the Company and complying with certain restrictive covenants set forth in the agreement. Further, if the Company is required to restate financials due to its material noncompliance with any financial reporting requirement under the U.S. securities laws during any period for which Dr. Bianco was chief executive officer of the Company or Dr. Bianco acts in a manner that would have constituted cause for his termination had he been employed at the time of such act, Dr. Bianco will not be entitled to any severance benefits that have not been paid, and will be required to repay any portion of the severance to the Company that has already been paid. The agreement further provides that if there is a change of control of the Company during Dr. Bianco’s employment with the Company, all of his then-outstanding and unvested stock-based compensation will fully vest and all outstanding stock options will remain exercisable for a period of two years following Dr. Bianco’s severance

date. As noted above, Dr. Bianco is not entitled to any tax gross-up payments from the Company under his new employment agreement.

Other Named Executive Officers.    The Company has entered into severance agreements with each of the named executive officers currently employed with the Company (other than Dr. Bianco and Dr. Plunkett). These agreements provide that in the event the executive is discharged from employment by the Company without cause (as defined in the agreement) or resigns for good reason (as defined in the agreement, which definition includes a change in control of the Company), he will receive the following severance benefits: (i) cash severance equal to 18 months of his base salary, plus an amount equal to the greater of the average of his three prior years’ bonuses or thirty percent of his base salary, (ii) reimbursement for up to 18 months by the Company for COBRA premiums to continue his medical coverage and that of his eligible dependents, and (iii) continued payment for up to 18 months by the Company of premiums to maintain life insurance paid for by the Company at the time of his termination. In addition, the executive would be entitled to accelerated vesting of all of his then-outstanding and unvested stock-based compensation, and, in the case of Mr. Bianco and Dr. Singer, his outstanding stock options would remain exercisable for a period of 21 months following the severance date. The executive’s right to receive these severance benefits is conditioned upon his executing a release of claims in favor of the Company and not breaching his inventions and proprietary information agreement with the Company. Although the severance agreements for Mr. Bianco and Dr. Singer provide for the executive to be reimbursed for any excise tax imposed under Section 280G of the Internal Revenue Code on these benefits, each of these executives has entered into an agreement with the Company, effective January 3, 2012, that provides he will not be entitled to any such tax reimbursement. These executives’ agreements are included in the award agreement evidencing the executive’s 2012-2014 Performance Award and applies to taxes imposed under Section 280G on any payments or benefits received from the Company, whether the payment is made pursuant to the executive’s 2012-2014 Performance Award or another Company plan or agreement. The severance agreement for Dr. Benner does not provide for any tax reimbursements.

Quantification of Severance and Change in Control Benefits.

The tables below quantify the benefits that would have been payable to each of the named executive officers if the executive’s employment had terminated under the circumstances described above and/or a change in control of the Company had occurred on December 31, 2012. The first table presents the benefits the executive would have received if such a termination had occurred outside of the context of a change in control. The second table presents the benefits the executive would have received if such a termination occurred in connection with a change in control.

Severance Benefits (Outside of Change of Control)

Name

  Cash
Severance
($)(1)
   Continuation of
Health/Life
Benefits ($)(2)
   Equity
Acceleration
($)(3)
   Totals
($)
 

James A. Bianco, M.D.

   1,300,000     164,220     4,017,067     5,481,287  

Louis A. Bianco

   724,517     66,588     1,613,872     2,404,977  

Jack W. Singer, M.D.

   716,500     86,819     1,613,872     2,417,191  

Steven E. Benner, M.D.

   712,000     38,628     130,000     880,628  

Matthew Plunkett, Ph.D.(4)

   585,000     34,020     130,000     749,020  

(1)For Dr. Bianco, this amount represents two years of his base salary. For each of the other named executive officers, this amount represents the sum of (i) 18 months of the executive’s base salary, and (ii) the greater of the executive’s average annual bonus for the preceding three years or 30% of the executive’s base salary.
(2)

This amount represents the aggregate estimated cost of the premiums that would be charged to continue health coverage for the applicable period pursuant to COBRA for the executive and his eligible dependents (to the extent that such dependents were receiving health benefits as of December 31, 2012). For Dr. Bianco,

this amount also includes the cost of continued payment by the Company of his life insurance premiums for two years. For each of the other named executive officers, this amount also includes the cost of continued payment by the Company of their life insurance premiums for 18 months.
(3)This amount represents the intrinsic value of the unvested portions of the executive’s awards that would have accelerated on a termination of the executive’s employment as described above. For options, this value is calculated by multiplying the amount (if any) by which $1.30 (the closing price of the Company’s common stock on the last trading day of fiscal 2012) exceeds the exercise price of the option by the number of shares subject to the accelerated portion of the option. For restricted stock awards, this value is calculated by multiplying $1.30 (or, in the case of awards granted by Aequus, $0.13, which Aequus determined to be the fair market value of Aequus common stock as of December 31, 2012) by the number of shares subject to the accelerated portion of the award. As noted above, each executive would have been entitled to full acceleration of his then-outstanding equity awards on such a termination. Dr. Bianco’s stock options would also remain exercisable for two years following his termination, subject to earlier termination at the end of the maximum term of the option or in connection with a change in control of the Company.
(4)As noted above, the Company has not entered into a severance agreement with Dr. Plunkett. This line reflects the level of severance benefits provided to the other executives under the agreements described above in light of the provision in Dr. Plunkett’s offer letter that he will generally be entitled to severance benefits on the same terms provided to the other senior executives.

Change of Control Severance Benefits

Name

  Cash
Severance
($)(1)
   Continuation of
Health
Benefits ($)(2)
   Equity
Acceleration
($)(3)
   Total ($) 

James A. Bianco, M.D.

   1,935,000     164,220     2,946.286     5,045,506  

Louis A. Bianco

   724,517     66,588     1,178,421     1,969,526  

Jack W. Singer, M.D.

   716,500     86,819     1,178,421     1,981,740  

Steven E. Benner, M.D.

   712,000     38,628     130,000     880,628  

Matthew Plunkett, Ph.D.(4)

   585,000     34.020     130,000     749,020  

(1)For each of the named executive officers, this amount represents the sum of (i) 18 months of the executive’s base salary (or, in the case of Dr. Bianco, two years of his base salary), and (ii) the greater of the executive’s average annual bonus for the preceding three years or 30% of the executive’s base salary.
(2)See footnote (2) to the table above.
(3)See footnote (3) to the table above. Except as expressly provided under the terms of the award, Dr. Bianco would generally be entitled to full acceleration of his outstanding equity awards on a change in control without regard to whether his employment terminates, and each of the other executives would generally be entitled to full acceleration of his outstanding equity awards on a termination of his employment in the circumstances described above. As described in the Compensation Discussion and Analysis above, the long-term incentive awards granted to the named executive officers in January 2012 would generally vest on a change in control, except that the vesting of a portion of these awards was contingent on the Company’s market capitalization and, if a change in control of the Company occurred, would be determined based on the Company’s market capitalization at the time of the change in control (notwithstanding any acceleration provisions of the executive’s employment or severance agreement). If a change in control had occurred on December 31, 2012, the market capitalization goal under the awards would not have been met, and the portion of the award related to market capitalization would have been cancelled on that date. Accordingly, the values reported in this column are lower than the values reported in the corresponding column of the Severance Benefits (Outside of Change of Control) table above.
(4)See footnote (4) to the table above.

Former Executives.    In October 2012, the Company entered into a separation agreement with Mr. Philips in connection with the termination of his employment with the Company effective July 16, 2012. Under the agreement, Mr. Philips is entitled to receive a severance payment of $435,500, with 25% of such amount to be

paid within 30 days after the effective date of the agreement and the balance of such amount to be paid in twelve monthly installments thereafter. The Company will also pay Mr. Philips’ premiums to continue his health coverage for 13 months following his termination. Mr. Philips’ equity awards granted by the Company and Aequus Biopharma, Inc., a subsidiary of the Company, to the extent then outstanding and unvested, terminated as of July 16, 2012. Pursuant to the agreement, Mr. Philips has agreed to vote the existing shares of the Company that he owns in a manner consistent with the recommendation of the Company’s board of directors through October 13, 2013. The separation agreement also includes a mutual release of claims by the parties and certain restrictive covenants by Mr. Philips in favor of the Company.

In January 2013, the Company entered into a separation agreement with Mr. Eramian in connection with the termination of his employment with the Company effective November 15, 2012. Under the agreement, Mr. Eramian is entitled to receive total cash severance payments of approximately $567,238. Of the total payments, approximately $252,238 will be paid in May 2013, and the balance will be paid in twelve monthly installments following May 2013. The Company will also pay the premiums to continue Mr. Eramian’s health coverage and life insurance provided by the Company for up to 18 months following his termination. In addition, the agreement provides for accelerated vesting of certain equity awards granted to Mr. Eramian by the Company that were otherwise unvested such that he became vested in 33,712 shares of Company common stock. Any rights of Mr. Eramian to other equity awards granted by the Company, to the extent otherwise unvested, terminated. The agreement also includes a mutual release of claims by the parties and certain restrictive covenants by Mr. Eramian in favor of the Company.

DIRECTOR COMPENSATION

Non-Employee Director Compensation Table—Fiscal 2012

The following table presents information regarding the compensation paid for fiscal year 2012 to members of the Company’s board of directors who are not also employees of the Company, or the non-employee directors. The compensation paid to Dr. Bianco and Dr. Singer, who are also employed by the Company, for fiscal year 2012 is presented above in the Summary Compensation Table and the related explanatory tables. Dr. Bianco and Dr. Singer are generally not entitled to receive additional compensation for their services as directors.

Name

 Fees
Earned or
Paid in
Cash
($)(1)
  Stock
Awards
($)(2)(3)(4)
  Option
Awards
($)(3)
  Non-Equity
Incentive Plan
Compensation
($)
  Change in
Pension Value
and
Nonqualified
Deferred
Compensation
Earnings ($)
  All Other
Compensation
($)
  Total ($) 

John H. Bauer

  137,500    243,323                    380,823  

Vartan Gregorian, Ph.D.

  132,000    243,323                    375,323  

Richard L. Love

  122,500    243,323                    365,823  

Mary O. Mundinger, DrPH

  122,500    243,323                    365,823  

Phillip M. Nudelman, Ph.D.

  178,750    339,984                    518,734  

Frederick W. Telling, Ph.D.(5)

  152,500    243,323                    395,823  

Reed V. Tuckson, M.D.

  95,750    243,323                    339,073  

(1)The amounts reported in the “Fees Earned or Paid in Cash” column of the table above reflect the payment during 2012 of the director’s retainer and meeting fees for 2012 and retainer fees for the first six months of 2013. The director is not entitled to any additional retainer fee for the first six months of 2013.
(2)The amounts reported in the “Stock Awards” and “Option Awards” columns of the table above reflect the grant date fair value of the stock awards and option awards, respectively, granted to the Company’s non-employee directors during fiscal year 2012 as determined under generally accepted accounting principles used to calculate the value of equity awards for purposes of the Company’s financial statements. For a discussion of the assumptions and methodologies used to calculate the amounts reported above, please see the discussion of equity awards contained in Note 13 (Share-Based Compensation) to the Company’s Consolidated Financial Statements, included as part of this Form 10-K.
(3)The table below presents the number of outstanding and unexercised option awards and the number of shares subject to unvested stock awards held by each of the Company’s non-employee directors as of December 31, 2012. This table includes the 2012-2014 Performance Awards granted to each of the non-employee directors under the Company’s equity grant program and described in more detail under “Non-Employee Director Compensation” below. The table below reflects the aggregate number of shares that would be issued upon timely achievement of all of the performance goals based on the applicable payout percentages for these awards and the number of shares of the Company’s common stock issued and outstanding on December 31, 2012. The actual number of shares issued for each award upon timely achievement of the related performance goal may be different from the number reported in the table above depending on the number of shares of the Company’s common stock issued and outstanding at the time the goal is achieved.

Director

  Number of  Shares
Subject to Outstanding
Options as of
12/31/2012
   Number of Unvested
Restricted Shares/

Units as of
12/31/2012
 

John H. Bauer

   3,179     319,587  

Vartan Gregorian, Ph.D.

   3,200     319,587  

Richard L. Love

   3,180     319,587  

Mary O. Mundinger, DrPH

   3,207     319,587  

Phillip M. Nudelman, Ph.D.

   3,214     479,381  

Frederick W. Telling, Ph.D.

   3,169     319,587  

Reed V. Tuckson, M.D.

   2,200     321,987  

(4)On December 3, 2012, each of the non-employee directors (other than Dr. Nudelman) was granted 71,429 fully-vested shares with a grant-date fair value of $100,000, and Dr. Nudelman was granted 89,286 fully-vested shares with a grant-date fair value of $125,000.

Effective January 3, 2012, each of the non-employee directors was granted a 2012-2014 Performance Award under the Company’s equity grant program as described below under “Non-Employee Director Compensation.” The amounts reported in the “Stock Awards” column of the table above for each of the non-employee directors include a grant-date fair value of these performance awards of $143,323 (or $214,984 in the case of Dr. Nudelman’s award) based on the probable outcome (as of the grant date) of the performance-based conditions applicable to the awards, as determined under generally accepted accounting principles. The aggregate grant-date fair value of these awards for each director assuming that the highest level of performance conditions will be achieved is $971,020 (or $1,459,290 in the case of Dr. Nudelman’s award).

See footnote (2) above for the assumptions used to value each of these awards granted to the non-employee directors in 2012.

(5)For Dr. Telling, the “Fees Earned or Paid in Cash” column of the table above includes $7,500 fees for his service on the board of directors of Aequus. Dr. Telling did not receive any other compensation in 2012 for his services to Aequus. Dr. Telling holds 8,333 shares of Aequus common stock that were unvested as of December 31, 2012.

Non-Employee Director Compensation

Equity Grants.    Under the Company’s Director Compensation Policy, the Company’s non-employee directors receive an equity award each year. Effective June 27, 2012, the Company’s board of directors amended the policy to provide that the level of these grants would be a fixed dollar amount (as opposed to a fixed number of shares). Under the amended policy, non-employee directors will receive stock awards as follows: (i) each new non-employee director will be granted an award of fully vested shares of the Company’s common stock in connection with joining the Board, with the number of shares to equal $100,000 divided by the closing price of a share of the Company’s common stock on the date of grant of the award; and (ii) in connection with each annual meeting of shareholders commencing with the 2012 Annual Meeting, each continuing non-employee director will be granted an award of fully vested shares of the Company’s common stock, with the number of shares to equal $100,000 ($125,000 in the case of a non-employee director who is serving, after such annual meeting of shareholders, as the Chair of the Board) divided by the closing price of a share of the Company’s common stock on the date of grant of the award. Each grant will be rounded to the nearest whole share. In accordance with this policy, each non-employee director received a stock grant in December 2012 as described in note (4) to the table above. The Company’s non-employee directors are also eligible to receive discretionary grants of equity awards under the 2007 Equity Plan from time to time.

As described in the “2012-2014 Performance Awards” section of the Compensation Discussion and Analysis above, the Compensation Committee had previously granted equity awards in 2009 to each of the named executive officers that would vest if the Company achieved certain performance goals by December 31, 2011. At the same time, our board of directors approved grants of similar awards to each of the non-employee directors (other than Dr. Tuckson who was not on our board of directors at that time). The 2009 awards granted to the executives and directors expired on December 31, 2011 as the goals were not achieved. As described above, the Compensation Committee approved the grants of the 2012-2014 Performance Awards to the named executive officers that will be payable in fully vested shares of Company common stock if the Company achieves certain financial and operational performance goals by December 31, 2014. In connection with the expiration of the 2009 awards, our board of directors also approved the grant, effective January 3, 2012, to each non-employee director of a 2012-2014 Performance Award that will be payable in fully vested shares of the Company’s common stock upon the achievement of the performance goals identified for the named executive officers’ awards in the Compensation Discussion and Analysis above, subject to the goal’s achievement before December 31, 2014 and the director’s continued service with the Company. As with the awards granted to the executives, a portion of each non-employee director’s 2012-2014 Performance Award was granted in the form of

restricted stock. The number of shares that will be payable in respect of each award will be determined based on the applicable payout percentage assigned to that particular goal and the number of the Company’s issued and outstanding shares at the time the goal is achieved, subject to reduction on a share-for-share basis for any shares of restricted stock that vest in connection with the achievement of that particular goal and subject also to the applicable share limits of the Company’s equity incentive plan.

The award percentages corresponding to the various performance goals for each of the non-employee directors are set forth in the following table:

 

  Performance Goals and Applicable Award Percentages 

Name

 Pix
MAA
Approval(1)
  Pix
NDA
Approval
  Opaxio
NDA
Approval
  Market
Cap
Goal
  $50M
Sales
Goal
  $100M
Sales
Goal
  Cash Flow
Break Even
  EPS
Goal
 

Phillip M. Nudelman, Ph.D.

  0.068  0.113  0.013  0.1125  0.045  0.09  0.045  0.018

All Other Non-Employee Directors

  0.045  0.075  0.008  0.075  0.03  0.06  0.03  0.013

(1)As noted in the Compensation Discussion and Analysis above with respect to the 2012-2014 Performance Awards granted to named executive officers, the Board of Directors certified on June 27, 2012 that the Pix MAA Approval performance goal had been achieved and that, accordingly, the portion of these awards allocated to this goal vested as of the date of the Board of Directors’ certification.

Retainers and Meeting Fees.    In addition, non-employee directors are entitled under the Director Compensation Policy to annual retainers and fees for attending Board and committee meetings as set forth in the following table:

   Annual Cash
Retainer ($)
   Meeting Fees ($) 
    Board   Committee 

Board Member, other than Chairman of the Board

   40,000     2,750     —    

Chairman of the Board

   75,000     2,750     —    

Audit Committee Member

   —       —       1,250  

Audit Committee Chair

   12,500     —       1,250  

Compensation Committee Member

   —       —       1,250  

Compensation Committee Chair

   12,500     —       1,250  

Nominating and Governance Committee Member

   —       —       1,250  

Nominating and Governance Committee Chair

   12,500     —       1,250  

All non-employee directors are also reimbursed for their expenses incurred in attending Board meetings and committee meetings, as well as other Board-related travel expenses.

Item 12.Security Ownership of Certain Beneficial Owners and Management and Related Shareholder Matters

The following table provides certain information regarding beneficial ownershiprequired by this Item is incorporated herein by reference from the Company’s 2014 Proxy Statement under the captions “Other Information – Security Ownership of common stock as of February 15, 2013 by (1) each shareholder known by us to be the beneficial owner of more than 5% of the outstanding shares of our common stock, (2) each of our directors, (3) each of the principal executive officer, or the PEO, principal financial officer, or the PFO,Certain Beneficial Owners and our three most highly compensated executive officers other than the PEOManagement” and PFO who served as executive officers during the fiscal year ended December 31, 2012, and (4) all directors and executive officers as a group:

   Common Stock 

Name and Address of Beneficial Owner

  Number of
Shares
Beneficially
Owned(1)
   Shares
Subject to
Convertible
Securities(2)
   Percentage
Ownership(1)
 

5% or More Shareholders:

      

Entities affiliated with FMR LLC(3)

   7,331,357     176,400    6.7

Directors and named executive officers:(4)

      

John H. Bauer**(5)

   252,591     3,179     *  

Steven E. Benner, M.D.(6)

   100,000          *  

James A. Bianco, M.D.**(7)

   1,057,403     844     *  

Louis A. Bianco(8)

   443,105     477     *  

Daniel G. Eramian(9)

   82,818          *  

Vartan Gregorian, Ph.D.**(10)

   239,382     3,200     *  

Richard L. Love**(11)

   266,690     3,180     *  

Mary O. Mundinger, DrPH**(12)

   254,787     3,207     *  

Phillip M. Nudelman, Ph.D.**(13)

   301,629     3,214     *  

Craig W. Philips(14)

   414          *  

Matthew J. Plunkett, Ph.D.(15)

   100,000          *  

Jack W. Singer, M.D.**(16)

   495,994     490     *  

Frederick W. Telling, Ph.D.**(17)

   226,477     3,169     *  

Reed V. Tuckson, M.D.**(18)

   223,307     1,400     *  

All directors and executive officers as a group (14 persons)(19)

   4,044,597     22,360     3.68

*Less than 1%.
**Denotes director of the Company.
(1)Beneficial ownership generally includes voting or investment power with respect to securities and is calculated based on 109,810,743 shares of our common stock outstanding as of February 15, 2013. This table is based upon information supplied by officers, directors and other investors including information from Schedules 13D, 13G and 13F and Forms 3 and 4 filed with the SEC. Shares of common stock subject to options, warrants or other securities convertible into common stock that are currently exercisable or convertible, or exercisable or convertible within sixty (60) days of February 15, 2013, are deemed outstanding for computing the percentage of the person holding the option, warrant or convertible security but are not deemed outstanding for computing the percentage of any other person. Except as indicated in the footnotes to this table and pursuant to applicable community property laws, the persons named in the table have sole voting and investment power with respect to all shares of stock beneficially owned.
(2)Shares subject to convertible securities included in this column reflects all options, warrants and convertible debt held by the holder exercisable within sixty (60) days after February 15, 2013. These shares are also included in the column titled “Number of Shares Beneficially Owned.”
(3)

As reflected in the Schedule 13G/A filed on February 14, 2013 by FMR LLC (“FMR”) and Edward C. Johnson. Fidelity Management & Research Company (“Fidelity Management”), a wholly-owned subsidiary of FMR LLC and an investment advisor registered under Section 203 of the Investment Advisers Act of 1940, is the beneficial owner of 7,331,357 shares and this amount beneficially owned includes

176,400 shares, as adjusted to reflect our one-for-five reverse stock split that was effective on September 2, 2012, of our common stock issuable upon exercise of warrants. The ownership of one investment company, Fidelity Select Biotechnology Portfolio (“Fidelity Select”) amounted to 6,843,029 of the shares. Mr. Johnson and FMR, through its control of Fidelity Management, and the funds each has sole power to dispose of the shares. Neither FMR nor Mr. Johnson has the sole power to vote or direct the voting of the shares, which power resides with the funds’ Board of Trustees. Fidelity Management carries out the voting of the shares under written guidelines established by the funds’ Board of Trustees. The address of Fidelity Management and Fidelity Select is 82 Devonshire Street, Boston MA 02109.
(4)The address of our current directors and executive officers listed is 3101 Western Avenue, Suite 600, Seattle, Washington 98121.
(5)Number of shares beneficially owned includes 86,413 shares of unvested restricted stock, all of which have contingent vesting terms and will vest based on the achievement of certain performance goals as described in footnote (19) below.
(6)Number of shares beneficially owned includes 100,000 shares of unvested restricted stock.
(7)Number of shares beneficially owned includes 976,529 shares of unvested restricted stock, 751,779 of which have contingent vesting terms and will vest based on the achievement of certain performance goals as described in footnote (19) below.
(8)Number of shares beneficially owned includes 372,456 shares of unvested restricted stock, 305,032 of which have contingent vesting terms and will vest based on the achievement of certain performance goals as described in footnote (19) below. Includes 37 shares held by Mr. Bianco in trust for his children.
(9)Mr. Eramian, our former Executive Vice President, Corporate Communications, separated from the Company effective as of November 15, 2012.
(10)Number of shares beneficially owned includes 86,413 shares of unvested restricted stock, all of which have contingent vesting terms and will vest based on the achievement of certain performance goals as described in footnote (19) below.
(11)Number of shares beneficially owned includes 86,413 shares of unvested restricted stock, all of which have contingent vesting terms and will vest based on the achievement of certain performance goals as described in footnote (19) below.
(12)Number of shares beneficially owned includes 86,413 shares of unvested restricted stock, all of which have contingent vesting terms and will vest based on the achievement of certain performance goals as described in footnote (19) below.
(13)Number of shares beneficially owned includes 129,809 shares of unvested restricted stock, all of which have contingent vesting terms and will vest based on the achievement of certain performance goals as described in footnote (19) below.
(14)Mr. Philips resigned as President on June 16, 2012, effective as of July 16, 2012.
(15)Number of shares beneficially owned includes 100,000 shares of unvested restricted stock.
(16)Number of shares beneficially owned includes 372,456 shares of unvested restricted stock, 305,032 of which have contingent vesting terms and will vest based on the achievement of certain performance goals as described in footnote (19) below.
(17)Number of shares beneficially owned includes 86,413 shares of unvested restricted stock, all of which have contingent vesting terms and will vest based on the achievement of certain performance goals as described in footnote (19) below.
(18)Number of shares beneficially owned includes 88,813 shares of unvested restricted stock, 86,413 of which have contingent vesting terms and will vest based on the achievement of certain performance goals as described in footnote (19) below.
(19)

Number of shares beneficially owned includes 2,572,128 shares of unvested restricted stock for all directors and executive officers as a group, of which 2,010,130 shares are contingent and would vest as described in the above footnotes. Shares beneficially owned include unvested restricted stock which, as described in the Compensation Discussion and Analysis in Item 11 above, have contingent vesting terms based on the achievement of the following five performance goals, subject to the goal’s achievement before December 31, 2014 and the individual’s continued employment or service with us: Pix NDA Approval,

Opaxio NDA Approval, Market Cap Goal, $50M Sales Goal and $100M Sales Goal. In the event that a particular performance goal is achieved prior to December 31, 2014, the following shares of restricted stock would vest as of the date of certification by the Compensation Committee of the achievement of such goal:

Name

  Number of Shares of Restricted Stock Granted 
  PIX
NDA
Approval
   Opaxio
NDA
Approval
   Market Cap
Goal
   $50M
Sales
Goal
   $100M
Sales
Goal
 

James A. Bianco, M.D.

   168,562     31,741     280,937     112,375     158,164  

John H. Bauer

   28,093     3,174     28,093     11,237     15,816  

Louis A. Bianco

   68,174     12,855     114,248     45,699     64,056  

Vartan Gregorian, Ph.D.

   28,093     3,174     28,093     11,237     15,816  

Richard L. Love

   28,093     3,174     28,093     11,237     15,816  

Mary O. Mundinger, DrPH.

   28,093     3,174     28,093     11,237     15,816  

Phillip M. Nudelman, Ph.D.

   42,328     4,761     42,140     16,856     23,724  

Jack W. Singer, M.D.

   68,174     12,855     114,248     45,699     64,056  

Frederick W. Telling, Ph.D.

   28,093     3,174     28,093     11,237     15,816  

Reed V. Tuckson

   28,093     3,174     28,093     11,237     15,816  

“Other Information – Equity Compensation Plan InformationInformation.”

The following table gives information about our common stock that may be issued upon the exercise of options, warrants and rights under all of our existing compensation plans as of December 31, 2012, including the 2007 Equity Plan, 1994 Equity Incentive Plan and the 2007 Employee Stock Purchase Plan, as amended, or the ESPP.

Plan Category

  (a) Number  of
Securities to be Issued
Upon Exercise of
Outstanding Options,
Warrants and Rights
  (b) Weighted  Average
Exercise Price of
Outstanding Options,
Warrants, and Rights
   (c) Number of
Securities Remaining
Available for Future
Issuance Under Equity
Compensation Plans
(Excluding Securities
Reflected in Column
(a))
 

Plans Approved by Shareholders

   307,329(1) $33.72     41,951(2)

Plan Not Approved by Shareholders

   —      —      —    

Totals

   307,329   $33.72     41,951  

(1)Of these shares, 307,316 were subject to options then outstanding under the 2007 Equity Plan, and 13 were subject to options then outstanding under the 1994 Equity Incentive Plan. As described in the Compensation Discussion and Analysis above, the Compensation Committee approved the 2012-2014 Performance Awards under the 2007 Equity Plan that would be payable in fully-vested shares of our common stock upon satisfaction of the performance and other requirements imposed on the award, with a portion of each such award being granted in the form of restricted shares that would vest upon achievement of the related performance goal and the balance of each such award being granted as a contingent right to receive additional shares upon achievement of the performance goal based on our total outstanding shares at the time such goal is achieved. Columns (a) and (b) of this table are presented without giving effect to the 2012-2014 Performance Awards as (1) the restricted shares subject to these awards were issued and outstanding as of December 31, 2012, and (2) the remaining number of shares that would be issuable in payment of these awards depends on our total issued and outstanding shares at the time of payment and was therefore not determinable as of December 31, 2012.
(2)

Of these shares, no shares were available for issuance under the 2007 Equity Plan, and 41,951 were available for issuance under the ESPP. Our authority to grant new awards under the 1994 Equity Incentive Plan has terminated. This number of shares is presented after giving effect to the 2012-2014 Performance Awards (based on the number of shares of our common stock issued and outstanding as of December 31, 2012 and assuming the performance goals applicable to these awards were achieved). As of December 31,

2012, 2,993,930 shares of our common stock were available for award grant purposes under the 2007 Equity Plan (giving effect only to the portion of the 2012-2014 Performance Awards granted in the form of restricted shares as described in footnote (1) above), and all of these shares would have been used to pay the 2012-2014 Performance Awards if the performance goals applicable to these awards had been achieved. If the 2012-2014 Performance Awards become payable and sufficient shares are not available under the 2007 Equity Plan (after reserving sufficient shares to cover the other awards then outstanding under the 2007 Equity Plan), the number of shares payable with respect to the 2012-2014 Performance Awards will be proportionately reduced such that the share limits of the 2007 Equity Plan will not be exceeded.

 

Item 13.Certain Relationships and Related Transactions, and Director Independence

The information required by this Item is incorporated herein by reference from the Company’s 2014 Proxy Statement under the captions “Other Information – Related Party Transactions

Pursuant to our Code of Business Conduct and Ethics and our Amended and Restated Charter for the Audit Committee of our board of directors, any potential related party transaction must be fully disclosed to our Chief Financial Officer. Upon review, if our Chief Financial Officer determines that the transaction is material to us, then our Audit Committee must review and approve in writing in advance such related party transaction. Item 404(a) of Regulation S-K requires us to disclose in its Annual Report on Form 10-K any transaction involving more than $120,000 in which we are a participant and in which any related person has or will have a direct or indirect material interest. A related person is any executive officer, director, nominee for director, or holder of 5% or more of our common stock, or an immediate family member of any of those persons.

Overview,” “Other Information – Certain Transactions with Related Persons

In May 2007, we formed Aequus Biopharma, Inc., or Aequus, a majority-owned subsidiaryPersons” and Proposal 2 - Election of which our ownership was approximately 61% as of December 31, 2012. We entered into a license agreement with Aequus whereby Aequus gained rights to our Genetic Polymer™ technology which Aequus will continue to develop. The Genetic Polymer technology may speed the manufacture, development, and commercialization of follow-on and novel protein-based therapeutics.

In May 2007, we also entered into an agreement to fund Aequus in exchange for a convertible promissory note that becomes due and payable in five years and earns interest at a rate of 6% per annum. The note can be converted into equity at any time prior to its maturity upon our demand, or upon other triggering events. The number of shares of Aequus equity securities to be issued upon conversion of this note is equal to the quotient obtained by dividing (i) the outstanding balance of the note by (ii) 100% of the price per share of the equity securities. We funded Aequus $0.5 million, $0.6 million and $0.5 million during the years ended December 31, 2012, 2011 and 2010, respectively. In addition, we entered into a services agreement to provide certain administrative and research and development services to Aequus. The amounts charged for these services, if unpaid by Aequus within 30 days, will be considered additional principal advanced under the promissory note. The convertible promissory note balance including accrued interest was approximately $4.0 million and $3.3 million as of December 31, 2012 and 2011, respectively.

Our President and Chief Executive Officer, James A. Bianco, M.D. and our Executive Vice President, Global Medical Affairs and Translational Medicine, Jack W. Singer, M.D. are both minority shareholders of Aequus, each owning approximately 4.3% of the equity in Aequus as of December 31, 2012, and are members of the board of directors of Aequus. Additionally, Frederick W. Telling, Ph.D., a member of our board of directors, owns approximately 1.3% of Aequus as of December 31, 2012, which includes the restricted shares described in the next sentence, and is also a member of the board of directors of Aequus. In 2011, Dr. Telling was granted an award of 100,000 restricted shares of Aequus common stock with a grant-date fair value (as determined under generally accepted accounting principles) of $13,000 and payment of $2,500 was made by Aequus as partial reimbursement of Dr. Telling’s tax obligations in connection with this award. Of the 100,000 restricted shares of Aequus granted to Dr. Telling, 8,333 shares were unvested as of December 31, 2012. In addition, in 2012, Dr. Telling earned $7,500 in fees for his service on the board of directors of Aequus (of which $5,000 was paid

in 2012). Dr. Telling did not receive any other compensation in 2012 for his services to Aequus. Our Executive Vice President, Finance and Administration, Louis A. Bianco provides certain consulting services to Aequus, including financial guidance business development services, for which he received a grant of restricted shares of Aequus common stock during 2011 with a grant date fair value of $26,000 and a cash payment of $5,000 as partial reimbursement for taxes associated with such restricted shares. Prior to his resignation as our President in July 2012, Craig W. Philips provided certain consulting services to Aequus, including strategic planning services, for which he received a grant of restricted shares of Aequus common stock during 2011 with a grant date fair value of $26,000. The size of the grants to each of Mr. Bianco and Mr. Philips was determined by the board of directors of Aequus in its discretion, and each of these grants is subject to a four-year vesting schedule. Upon Mr. Philips resignation, 75% of his grant was forfeited.

We formerly owned a minority interest in DiaKine Therapeutics, Inc., or DiaKine. Louis A. Bianco and Jack W. Singer, M.D. resigned from the board of directors of DiaKine in August 2010 and December 2009, respectively. In 2005, we entered into a license agreement with DiaKine for the exclusive license of Lisofylline material to DiaKine. In connection with the license agreement, we also entered into a joint representation letter with DiaKine and a law firm for legal services provided by the law firm with respect to the Lisofylline material. Pursuant to the license agreement, DiaKine agreed to pay all fees of legal services provided by the law firm with respect to the Lisofylline material. Pursuant to the joint representation letter, we agreed to be jointly responsible to the law firm with DiaKine for the payment of such fees to the law firm. In 2009, DiaKine failed to pay certain amounts payable to the law firm pursuant to the joint representation letter. In February 2010, we severed the joint representation letter with DiaKine and paid the outstanding third-party payables owed to the law firm in the amount of $206,000. In exchange, DiaKine issued to us an unregistered convertible subordinated note due February 2013 in the amount of $206,000. The note was convertible into equity of DiaKine upon the occurrence of certain events, including certain financings of DiaKine and a sale of DiaKine.

On June 17, 2010, we terminated the license agreement due to the insolvency of DiaKine, and requested that DiaKine arrange for the return of all confidential material, intellectual property, materials and other records and reports. On August 17, 2010, we delivered an additional notice to DiaKine reiterating the termination of the license agreement due to material breach of the provisions of the license agreement by DiaKine. In addition, Mr. Bianco resigned from the board of directors of DiaKine on August 17, 2010.

On August 24, 2010, we received a letter from Brian C. Purcell, Esq., counsel to DiaKine, alleging that the termination of the license agreement pursuant to the June 17, 2010 and August 17, 2010 letters was invalid and that DiaKine remains in full compliance with the license agreement. On December 20, 2010, we delivered a letter to DiaKine confirming the termination but offering to enter into a new license agreement, on substantially the same terms and conditions as the terminated license agreement, for the exclusive license of Lisofylline material to DiaKine in the event that DiaKine were able to either obtain financing or sell the company within 180 days on terms and conditions acceptable to us. On January 10, 2011, we received an additional letter from Mr. Purcell reiterating DiaKine’s contention that the termination of the license agreement pursuant to our June 17, 2010 and August 17, 2010 letters was invalid.

On February 29, 2012, DiaKine and its shareholders, including us, entered into a Share Exchange Agreement pursuant to which DiaKine was acquired by Islet Sciences, Inc., or Islet, on March 14, 2012. In connection with the closing of the acquisition, we (i) converted the note into equity of DiaKine, which was exchanged (along with the our other equity interests in DiaKine) at the closing of the acquisition for Series C Preferred Shares of Islet and (ii) rescinded the termination of the license agreement. Our Series C Preferred Shares of Islet automatically converted into common shares of Islet on April 26, 2012.

Corey Masten-Legge, a stepson of James A. Bianco, M.D., is employed as a corporate attorney in our legal department. In 2012, Mr. Masten-Legge received $219,503 in base salary and bonus, approximately $3,293 in 401k Plan matching funds, a grant of 6,000 shares of restricted stock and a grant of stock options for 1,600 shares, with grant-date fair values (based on the assumptions used to value equity awards in our financial reporting) of $36,300 and $6,457, respectively.

Director Independence

Our board of directors has adopted standards concerning director independence which meet the NASDAQ independence standards and, with respect to the Audit Committee, the rules of the SEC.

We, our Nominating and Governance Committee and our board of directors are involved in the process for determining the independence of acting directors and director nominees. We solicit relevant information from directors and director nominees via a questionnaire, which covers material relationships, compensatory arrangements, employment and any affiliation with us. In addition to reviewing information provided in the questionnaire, we ask our executive officers on an annual basis regarding their awareness of any existing or currently proposed transactions, arrangements or understandings involving us in which any director or director nominee has or will have a direct or indirect material interest. We share our findings with our Nominating and Governance Committee and our board of directors regarding the NASDAQ and SEC independence requirements and any information regarding the director or director nominee that suggest that such individual is not independent. Our board of directors discusses all relevant issues, including consideration of any transactions, relationships or arrangements which are not required to be disclosed under Item 404(a) of Regulation S-K, prior to making a determination with respect to the independence of each director.

In making independence determinations, the following relationship was considered:

Dr. Nudelman’s son, Mark Nudelman, serves as the President and Chief Executive Officer of the Hope Heart Institute. We made charitable donations to the Hope Heart Institute in 2012; however, the amount falls within NASDAQ prescribed limits.

Based on the review described above, our board of directors affirmatively determined that:

A majority of the directors are independent, and all members of the Audit, Compensation and Nominating and Governance Committees are independent, under the NASDAQ standard and, in the case of the Audit Committee, the SEC standard.

All of the non-management directors of our board of directors are independent under the NASDAQ standard. The independent directors are: John H. Bauer, Vartan Gregorian, Ph.D., Richard L. Love, Mary O. Mundinger, DrPH, Phillip M. Nudelman, Ph.D., Frederick W. Telling, Ph.D. and Reed V. Tuckson, M.D.

James A. Bianco, M.D. and Jack W. Singer, M.D. are not independent by virtue of their positions as our President and Chief Executive Officer, and Executive Vice President, Global Medical Affairs and Translational Medicine, respectively.

Other than as described above, in 2012, there were no transactions, relationships or arrangements not disclosed as related person transactions that were considered by our board of directors in determining that the applicable independence standards were met by each of the directors.Directors.”

 

Item 14.Principal Accounting Fees and Services

The following table providesinformation required by this Item is incorporated herein by reference from the aggregate fees billed for professional services rendered by our principal accountants during eachCompany’s 2014 Proxy Statement under the caption “Proposal 4 – Ratification of the past two fiscal years ended December 31:

Services Rendered

  2012   2011 

Audit Fees (1)

  $588,000    $590,000  

Audit-Related Fees (2)

   —      —   

Tax Fees (3)

   —      —   

All Other Fees (4)

   —      —   

(1)

Audit Fees.    This category includes fees for professional services provided in conjunction with the audit of our financial statements and with the audit of management’s assessment of internal control over financial

reporting and the effectiveness of internal control over financial reporting, review of our quarterly financial statements, assistance and review of documents filed with the SEC, consents, and comfort letters and attestation services provided in connection with statutory and other regulatory filings and engagements.
(2)Audit Related Fees.    This category includes fees for assurance and related professional services associated with due diligence related to mergers and acquisitions, consultation on accounting standards or transactions, internal control reviews and assistance with internal control reporting requirements, services related to the audit of employee benefit plans, and other attestation services not required by statute or regulation.
(3)Tax Fees.    This category includes fees for professional services provided related to tax compliance, tax planning and tax advice.
(4)Other Fees. There were no other fees for services not included above.

Pre-Approval Policy

Pursuant to the amended and restated charter for our Audit Committee, our Audit Committee pre-approves all auditing services and non-audit services to be performed by our independent auditors. Our Audit Committee also pre-approves all associated fees, except for de minimus amounts for non-audit services, which are approved by the Audit Committee prior to the completionSelection of the audit.Independent Auditors.”

PART IV

 

Item 15.Exhibits, Financial Statement Schedules

 

(a)Financial Statements and Financial Statement Schedules

 

 (i)Financial Statements

Reports of Marcum LLP, Independent Registered Public Accounting Firm

Consolidated Balance Sheets

Consolidated Statements of Operations

Consolidated Statements of Comprehensive Loss

Consolidated Statements of Shareholders’ Equity (Deficit)

Consolidated Statements of Cash Flows

Notes to Consolidated Financial Statements

 

 (ii)Financial Statement Schedules

All schedules have been omitted since they are either not required, are not applicable, or the required information is shown in the financial statements or related notes.

 

 (iii)Exhibits

 

Exhibit
Number

  

Exhibit Description

  

Location

2.1  

Agreement and Plan of Merger by and between

Cell Therapeutics, Inc. and Novuspharma, S.p.A., dated as of June 16, 2003.

  Incorporated by reference to Exhibit 2.1 to the Registrant’s Current Report on Form 8-K, filed on June 17, 2003.
2.2  

Acquisition Agreement by and among Cell

Therapeutics, Inc., Cell Technologies, Inc. and

Cephalon, Inc., dated June 10, 2005.

  Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on June 14, 2005.
2.3  Acquisition Agreement among Cell Therapeutics, Inc., Cactus Acquisition Corp., Saguaro Acquisition Company LLC, Systems Medicine, Inc. and Tom Hornaday and Lon Smith dated July 24, 2007.  Incorporated by reference to Exhibit 2.1 to the Registrant’s Current Report on Form 8-K, filed on July 27, 2007.
    2.4†2.4  Purchase and FormationSecond Amendment to the Acquisition Agreement, dated as of August 6, 2009, by and among Cell Therapeutics, Inc., Spectrum Pharmaceuticals, Inc. and RIT Oncology, LLC, datedeach of Tom Hornaday and Lon Smith, in their capacities as of November 26, 2008.Stockholder Representatives.  

Incorporated by reference to Exhibit 2.110.1 to the Registrant’s Current Report on Form 8-K, filed on December 19, 2008.

The schedules to this exhibit have been omitted pursuant to Item 601(b)(2) of Regulation S-K. A description of the omitted schedules appears in the Table of Exhibits of Exhibit 2.1. The Registrant hereby agrees to furnish a copy of any omitted schedule to the Commission upon request.

August 7, 2009.
3.1  Amended and Restated Articles of Incorporation.  Incorporated by reference to Exhibit 4.1 to the Registrant’s Registration Statement onForm S-3 (File No. 333-153358), filed on September 5, 2008.
3.2  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series F Preferred Stock.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on February 9, 2009.

Exhibit
Number

Exhibit Description

Location

3.3  Amendment to Amended and Restated Articles of Incorporation.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on March 27, 2009.

Exhibit
Number

Exhibit Description

Location

3.4  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 1 Preferred Stock.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on April 13, 2009.
3.5  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 2 Preferred Stock.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on August 21, 2009.
3.6  Articles of Amendment to Amended and Restated Articles of Incorporation; Certificate of Designation, Preferences and Rights of Series ZZ Junior Participating Cumulative Preferred Stock.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current ReportRegistration Statement on Form 8-A, filed on December 28, 2009.
3.7  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 3 Preferred Stock.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on January 19, 2010.
3.8  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 4 Preferred Stock.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on April 5, 2010.
3.9  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 5 Preferred Stock.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on May 27, 2010.
3.10  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 6 Preferred Stock.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on July 27, 2010.
3.11  Amendment to Amended and Restated Articles of Incorporation.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on September 17, 2010.
3.12  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 7 Preferred Stock.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on October 22, 2010.
3.13  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 8 Preferred Stock.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on January 18, 2011.
3.14  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 9 Preferred Stock.  Incorporated by reference to Exhibit 3.2 to the Registrant’s Current Report on Form 8-K, filed on January 18, 2011.

Exhibit
Number

  

Exhibit Description

  

Location

3.15  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 10 Preferred Stock.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on February 24, 2011.
3.16  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 11 Preferred Stock.  Incorporated by reference to Exhibit 3.2 to the Registrant’s Current Report on Form 8-K, filed on February 24, 2011.
3.17  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 12 Preferred Stock.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on May 2, 2011.
3.18  Articles of Amendment to Amended and Restated Articles of Incorporation.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on May 18, 2011.
3.19  Amendment to Amended and Restated Articles of Incorporation.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on June 17, 2011.
3.20  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 13 Preferred Stock.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on July 6, 2011.
3.21  Amendment to Amended and Restated Articles of Incorporation.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on November 15, 2011.
3.22  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 14 Preferred Stock.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on December 14, 2011.
3.23  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 15-1 Preferred Stock.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on May 31, 2012.
3.24  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 16 Preferred Stock.  Incorporated by reference to Exhibit 10.2 to the Registrant’s Current Report on Form 8-K, filed on June 5, 2012.
3.25  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 15-2 Preferred Stock.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on August 1, 2012.
3.26  Amendment to Amended and Restated Articles of Incorporation.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on August 31, 2012.

Exhibit
Number

  

Exhibit Description

  

Location

3.27  Amendment to Amended and Restated Articles of Incorporation.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on September 4, 2012.
3.28  Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 17 Preferred Stock.  Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on October 11, 2012.
3.29Amendment to Amended and Restated Articles of Incorporation of Cell Therapeutics, Inc.Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on June 26, 2013.
3.30Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 18 Preferred Stock.Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on September 18, 2013.
3.31Articles of Amendment to Amended and Restated Articles of Incorporation; Designation of Preferences, Rights and Limitations of Series 19 Preferred Stock.Incorporated by reference to Exhibit 3.1 to the Registrant’s Current Report on Form 8-K, filed on November 15, 2013.
3.32  Second Amended and Restated Bylaws.  Incorporated by reference to Exhibit 3.2 to the Registrant’s Current Report on Form 8-K, filed on February 22, 2010.
4.1  Shareholder Rights Agreement, dated December 28, 2009, between Cell Therapeutics, Inc. and Computershare Trust Company, N.A.  Incorporated by reference to Exhibit 4.1 to the Registrant’s Registration Statement on Form 8-A, filed on December 28, 2009.
4.2  First Amendment to Shareholder Rights Agreement, dated as of August 31, 2012, between Cell Therapeutics, Inc. and Computershare Trust Company, N.A., as Rights Agent.  Incorporated by reference to Exhibit 4.1 to the Registrant’s Current Report on Form 8-K, filed on September 4, 2012.
4.3  Second Amendment to Shareholder Rights Agreement, dated as of December 6, 2012, between Cell Therapeutics, Inc. and Computershare Trust Company, N.A., as Rights Agent.  Incorporated by reference to Exhibit 4.1 to the Company’s Current Report on Form 8-K, filed on December 7, 2012.
4.4  Class B Common Stock Purchase Warrant, dated April 13, 2009.  Incorporated by reference to Exhibit 4.1 to the Registrant’s Current Report on Form 8-K, filed on April 13, 2009.
4.5  Common Stock Purchase Warrant, dated April 13, 2009.  Incorporated by reference to Exhibit 4.2 to the Registrant’s Quarterly Report on Form 10-Q, filed on August 6, 2009.
4.6  Common Stock Purchase Warrant, dated May 11, 2009.  Incorporated by reference to Exhibit 4.3 to the Registrant’s Quarterly Report on Form 10-Q, filed on August 6, 2009.

Exhibit
Number

Exhibit Description

Location

4.7  Form of Common Stock Purchase Warrant, dated April 6, 2010.  Incorporated by reference to Exhibit 4.2 to the Registrant’s Current Report on Form 8-K, filed on April 5, 2010.
4.8  Form of Common Stock Purchase Warrant, dated May 27, 2010.  Incorporated by reference to Exhibit 4.2 to the Registrant’s Current Report on Form 8-K, filed on May 27, 2010.
4.9  Form of Common Stock Purchase Warrant, dated July 27, 2010.  Incorporated by reference to Exhibit 4.6 to the Registrant’s Quarterly Report on Form 10-Q, filed on August 6, 2010.
4.10  Form of Common Stock Purchase Warrant, dated October 22, 2010.  Incorporated by reference to Exhibit 4.2 to the Registrant’s Current Report on Form 8-K, filed on October 22, 2010.

Exhibit
Number

Exhibit Description

Location

4.11  Form of Common Stock Purchase Warrant, dated May 3, 2011.  Incorporated by reference to Exhibit 4.2 to the Registrant’s Current Report on Form 8-K, filed on May 2, 2011.
4.12  Form of Common Stock Purchase Warrant, dated July 5, 2011.  Incorporated by reference to Exhibit 4.2 to the Registrant’s Current Report on Form 8-K, filed on July 6, 2011.
4.13  Form of Common Stock Purchase Warrant, dated December 13, 2011.  Incorporated by reference to Exhibit 4.2 to the Registrant’s Current Report on Form 8-K, filed on December 14, 2011.
4.14  Form of Warrant to Purchase Common Stock, dated May 29, 2012.  Incorporated by reference to Exhibit 4.3 to the Registrant’s Current Report on Form 8-K, filed on May 31, 2012.
4.15  Form of Warrant to Purchase Common Stock, dated July 30, 2012.  Incorporated by reference to Exhibit 4.1 to the Registrant’s Current Report on Form 8-K, filed on August 1, 2012.
  10.14.16  SubleaseWarrant Agreement, dated March 26, 2013, by and between F5 Networks,Cell Therapeutics, Inc. and Cell Therapeutics,Hercules Technology Growth Capital, Inc., dated March 30, 2001, as amended April 13, 2001.  Incorporated by reference to Exhibit 10.214.1 to the Registrant’s amended AnnualCurrent Report on Form 10-K/A for the year ended December 31, 2001,8-K, filed on April 30, 2002.March 28, 2013.
  10.2Third Amendment to Sublease Agreement between F5 Networks, Inc. and Cell Therapeutics, Inc., dated December 22, 2005.Incorporated by reference to Exhibit 10.6 to the Registrant’s Annual Report on Form 10-K for the year ended December 31, 2006, filed on March 16, 2007.
  10.3Lease agreement between Elliott Park LLC and Cell Therapeutics, Inc., dated August 20, 2002.Incorporated by reference to Exhibit 10.7 to the Registrant’s Annual Report on Form 10-K for the year ended December 31, 2002, filed on March 27, 2003.
  10.410.1  Office Lease, dated as of January 27, 2012, by and between Cell Therapeutics, Inc. and Selig Holdings Company LLC.  Incorporated by reference to Exhibit 10.4 to the Registrant’s Annual Report on Form 10-K for the year ended December 31, 2011, filed on March 8, 2012.
  10.5*10.2*  Employment Agreement between Cell Therapeutics, Inc. and James A. Bianco, dated as of March 10, 2011.  Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on March 15, 2011.
10.3*Amendment to Employment Agreement between the Registrant and James A. Bianco, dated as of March 21, 2013Incorporated by reference to Exhibit 10.4 to the Registrant’s Quarterly Report on Form 10-Q, filed on May 2, 2013.
10.4*Offer Letter, by and between Cell Therapeutics, Inc. and Matthew Plunkett, dated July 31, 2012.Incorporated by reference to Exhibit 10.24 to the Registrant’s Annual Report on Form 10-K for the year ended December 31, 2012, filed on February 28, 2013.

Exhibit
Number

Exhibit Description

Location

10.5*Offer Letter, by and between Cell Therapeutics, Inc. and Steven Benner, M.D., dated June 12, 2012.Incorporated by reference to Exhibit 10.22 to the Registrant’s Annual Report on Form 10-K for the year ended December 31, 2012, filed on February 28, 2013.
10.6*  Form of Strategic Management Team Severance Agreement.  Incorporated by reference to Exhibit 10.5 to the Registrant’s Annual Report on Form 10-K for the year ended December 31, 2008, filed on March 16, 2009.
10.7*  Form of Amendment to Strategic Management Team Severance Agreement.  Incorporated by reference to Exhibit 10.6 to the Registrant’s Annual Report on Form 10-K for the year ended December 31, 2008, filed on March 16, 2009.
10.8*Severance Agreement, dated as of March 21, 2013, between the Company and Matthew Plunkett.Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on March 22, 2013.
10.9*Severance Agreement, dated as of July 19, 2012, between the Company and Steven Benner, M.D.Incorporated by reference to Exhibit 10.23 to the Registrant’s Annual Report on Form 10-K for the year ended December 31, 2012, filed on February 28, 2013.
10.10*Director Compensation Policy.Incorporated by reference to Exhibit 10.5 to the Registrant’s Quarterly Report on Form 10-Q, filed on August 2, 2012.
10.11*  Form of Indemnification Agreement.  Incorporated by reference to Exhibit 10.19 to the Registrant’s Annual Report on Form 10-K for the year ended December 31, 2001, filed on March 29, 2002.

Exhibit
Number

Exhibit Description

Location

  10.9*10.12*  Form of Italian Indemnity Agreement  Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on December 17, 2009.
  10.10*1994 Equity Incentive Plan, as amended.Incorporated by reference to Exhibit 99.1 to the Registrant’s Registration Statement on Form S-8, filed on July 24, 2002 (File No. 333-97015).
  10.11*10.13*  2007 Equity Incentive Plan, as amended and restated.  Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on September 4, 2012.June 26, 2013.
  10.12*10.14*  2007 Employee Stock Purchase Plan, as amended and restated.  Incorporated by reference to Exhibit 10.2 to the Registrant’s Current Report on Form 8-K, filed on October 23, 2009.
  10.13*Form of Notice of Grant of Stock Options and Option Agreement for option grants under the Registrant’s 2007 Equity Incentive Plan, as amended.Incorporated by reference to Exhibit 10.19 to the Registrant’s Annual Report on Form 10-K for the year ended December 31, 2004, filed on March 4, 2005.
  10.14*Form of Notice of Grant of Award and Award Agreement for grants of restricted stock under the Registrant’s 2007 Equity Incentive Plan, as amended.Incorporated by reference to Exhibit 10.18 to the Registrant’s Annual Report on Form 10-K for the year ended December 31, 2004, filed on March 4, 2005.
10.15*Form of 2007 Equity Incentive Plan Restricted Stock Award Agreement for Employees.Incorporated by reference to Exhibit 10.6 to the Registrant’s Quarterly Report on Form 10-Q, filed on April 26, 2011.
  10.16*  Form of 2007 Equity Incentive Plan Restricted Stock Award Agreement for Directors.  Incorporated by reference to Exhibit 10.7 to the Registrant’s Quarterly Report on Form 10-Q, filed on April 26, 2011.
  10.17*10.16*  2007 Equity Incentive Plan Restricted Stock Award Agreement, dated April 8, 2011, by and between Cell Therapeutics, Inc. and James Bianco.  Incorporated by reference to Exhibit 10.4 to the Registrant’s Quarterly Report on Form 10-Q, filed on July 28, 2011.

Exhibit
Number

Exhibit Description

Location

  10.18*10.17*  Amendment to Restricted Stock Award Agreement, dated September 20, 2011, by and between Cell Therapeutics, Inc. and James Bianco.  Incorporated by reference to Exhibit 10.4 to the Registrant’s Quarterly Report on Form 10-Q, filed on October 25, 2011.
10.18*Form of 2007 Equity Incentive Plan Restricted Stock Award Agreement for Employees.Incorporated by reference to Exhibit 10.6 to the Registrant’s Quarterly Report on Form 10-Q, filed on April 26, 2011.
10.19*  Form of Restricted Stock Award Agreement for grants of restricted shares under the Registrant’s 2007 Equity Incentive Plan, as amended.Incorporated by reference to Exhibit 10.3 to the Registrant’s Quarterly Report on Form 10-Q, filed on October 30, 2013.
10.20*Form of Stock Option Agreement for option grants under the Registrant’s 2007 Equity Incentive Plan, as amended.Incorporated by reference to Exhibit 10.1 to the Registrant’s Quarterly Report on Form 10-Q, filed on October 30, 2013.
10.21*Form of Stock Award Agreement for grants of fully vested shares under the Registrant’s 2007 Equity Incentive Plan, as amended.Incorporated by reference to Exhibit 10.2 to the Registrant’s Quarterly Report on Form 10-Q, filed on October 30, 2013.
10.22*

Form of Equity/Long-Term Incentive Award

Agreement for the Registrant’s Directors.

  Incorporated by reference to Exhibit 10.3 to the Registrant’s Quarterly Report on Form 10-Q, filed on April 20, 2012.
  10.20*10.23*  

Form of Equity/Long-Term Incentive Award

Agreement for the Registrant’s Executive Officers.James A. Bianco, Louis A. Bianco and Jack W. Singer.

  Incorporated by reference to Exhibit 10.4 to the Registrant’s Quarterly Report on Form 10-Q, filed on April 20, 2012.
  10.21*10.24*  Director Compensation Policy.

Form of Equity/Long-Term Incentive Award

Agreement for Stephen E. Benner and Matthew J. Plunkett

Incorporated by reference to Exhibit 10.6 to the Registrant’s Quarterly Report on Form 10-Q, filed on May 2, 2013.
10.25*Amendment to Form of Equity/Long-Term Incentive Award Agreement, dated as of March 21, 2013, for James A. Bianco, Louis A. Bianco, Jack W. Singer and the Registrant’s Directors.  Incorporated by reference to Exhibit 10.5 to the Registrant’s Quarterly Report on Form 10-Q, filed on AugustMay 2, 2012.

Exhibit
Number

Exhibit Description

Location

2013.
  10.22*10.26*  Offer Letter, byAmendment to Form of Equity/Long-Term Incentive Award Agreement, dated as of January 30, 2014, for the Registrant’s Executive Officers and between Cell Therapeutics, Inc. and Steven Benner, M.D., dated June 12, 2012.Directors.  Filed herewith.
  10.23*Severance Agreement and General Release, by and between Cell Therapeutics, Inc. and Steven Benner, M.D., dated July 19, 2012.Filed herewith.
  10.24*Offer Letter, by and between Cell Therapeutics, Inc. and Matthew Plunkett, dated July 31, 2012.Filed herewith.
  10.25†10.27†  License Agreement between Cell Therapeutics, Inc. and PG-TXL Company, dated as of November 13, 1998.  Incorporated by reference to Exhibit 10.27 to the Registrant’s Annual Report on Form 10-K for the year ended December 31, 1998, filed on March 31, 1999.
  10.26†10.28†  Amendment No. 1 to the License Agreement between Cell Therapeutics, Inc. and PG-TXL Company, L.P., dated as of February 1, 2006.  Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on February 7, 2006.

Exhibit
Number

Exhibit Description

Location

  10.27†10.29†  License and Co-Development, dated September 15, 2006, by and among Cell Therapeutics, Inc., Cell Therapeutics Europe S.r.l. and Novartis International Pharmaceutical Ltd.  Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on September 18, 2006.
  10.2810.30†  Second Amendment

Co-Development and License Agreement, dated

March 11, 2011, by and between Chroma Therapeutics Ltd. and Cell Therapeutics, Inc.

Incorporated by reference to Exhibit 10.5 to the AcquisitionRegistrant’s Quarterly Report on Form 10-Q, filed on April 26, 2011.
10.31†Asset Purchase Agreement, dated as of August 6, 2009, byApril 18, 2012, between S*BIO Pte Ltd. and among Cell Therapeutics, Inc. and each of Tom Hornaday and Lon Smith, in their capacities as Stockholder Representatives.  Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on August 7, 2009.April 24, 2012.
  10.29†10.32†Development, Commercialization and License Agreement dated as of November 14, 2013 between Cell Therapeutics, Inc., Baxter International Inc., Baxter Healthcare Corporation and Baxter Healthcare SA.Filed herewith.
10.33†  Drug Product Manufacturing Supply Agreement, dated July 13, 2010, by and between NerPharMa, S.r.l. and Cell Therapeutics, Inc.  Incorporated by reference to Exhibit 10.6 to the Registrant’s Quarterly Report on Form 10-Q, filed on August 6, 2010.
  10.30†Co-Development and License Agreement, dated March 11, 2011, by and between Chroma Therapeutics Ltd. and Cell Therapeutics, Inc.Incorporated by reference to Exhibit 10.5 to the Registrant’s Quarterly Report on Form 10-Q, filed on April 26, 2011.
  10.31Form of Exchange Agreement between Cell Therapeutics, Inc. and certain other parties thereto, dated December 12, 2007.Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on December 13, 2007.
  10.32Letter Agreement with Midsummer Investment, Ltd., SCO Capital Partners, LLC, Context Opportunistic Master Fund, LP, Context Capital Management, LLC, ALTMA Fund SICAV PLC in Respect of the Grafton Sub Fund, Rockmore Investment Mater Fund Ltd., TRUK Opportunity Fund, LLC, TRUK International Fund, LP, McMahan Securities Co., L.P., Tewksbury Investment Fund Ltd., Whitebox Hedged High Yield Partners, LP and Whitebox Combined Partners, LP, dated January 29, 2009.Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on February 9, 2009.

Exhibit
Number

10.34†
  

Exhibit Description

Location

  10.33Letter Agreement with RHP Master Fund Ltd., dated February 4, 2009.Incorporated by reference to Exhibit 10.2 to the Registrant’s Current Report on Form 8-K, filed on February 9, 2009.
  10.34Form of Securities Purchase Agreement, dated January 12, 2011.Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on January 18, 2011.
  10.35Form of Securities Purchase Agreement, dated February 17, 2011.Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on February 24, 2011.
  10.36Form of Securities Purchase Agreement, dated April 27, 2011.Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on May 2, 2011.
  10.37

Form of Securities Purchase Agreement, dated

June 29, 2011.

Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on July 6, 2011.
  10.38Form of Securities Purchase Agreement, dated December 8, 2011.Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on December 14, 2011.
  10.39Stipulation of Settlement, dated February 13, 2012.Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on February 15, 2012.
  10.40†Asset Purchase Agreement, dated April 18, 2012, between S*BIO Pte Ltd. and Cell Therapeutics, Inc.Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on April 24, 2012.
  10.41†Form of Registration Rights Agreement, by and between Cell Therapeutics, Inc., S*BIO Pte Ltd. and each Holder Permitted Transferee.Incorporated by reference to Exhibit 10.2 to the Registrant’s Current Report on Form 8-K, filed on April 24, 2012.
  10.42Form of Securities Purchase Agreement, dated May 28, 2012.Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on May 31, 2012.
  10.43Registration Rights Agreement, by and between Cell Therapeutics, Inc., S*BIO Pte Ltd. and each Holder Permitted Transferee, dated May 31, 2012.Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on June 5, 2012.
  10.44†Master Services Agreement, dated July 9, 2012,

between Quintiles Commercial Europe Limited

CTI Life Sciences Ltd.

  Incorporated by reference to Exhibit 10.6 to the Registrant’s CurrentQuarterly Report on Form 10-Q, filed on August 2, 2012.
  10.4510.35  Letter of Guarantee, dated July 1, 2012, between Cell Therapeutics, Inc. and Quintiles Commercial Europe Limited.  Incorporated by reference to Exhibit 10.7 to the Registrant’s CurrentQuarterly Report on Form 10-Q, filed on August 2, 2012.
  10.46†10.36†  

Logistics Agreement, dated September 1, 2012,

between Movianto Nederland BV and CTI Life

Sciences Limited.

  Incorporated by reference to Exhibit 10.4 to the Registrant’s CurrentQuarterly Report on Form 10-Q, filed on November 1, 2012.

Exhibit
Number

Exhibit Description

Location

  10.4710.37  Settlement Agreement and Full and Final Release of Claims, dated as of October 25, 2012, by and between Cell Therapeutics, Inc. and Craig W. Philips.  Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on October 31, 2012.
  10.4810.38  Stipulation

Settlement Agreement and Full and Final Release of Settlement,Claims dated November 6,as of January 4, 2013, by and between

Cell Therapeutics, Inc. and Daniel Eramian.

Incorporated by reference to Exhibit 10.49 to the Registrant’s Annual Report on Form 10-K for the year ended December 31, 2012, filed on February 28, 2013.
10.39†

Form of Registration Rights Agreement, by and

between Cell Therapeutics, Inc., S*BIO Pte Ltd.

and each Holder Permitted Transferee.

Incorporated by reference to Exhibit 10.2 to the Registrant’s Current Report on Form 8-K, filed on April 24, 2012.
10.40Registration Rights Agreement, by and between Cell Therapeutics, Inc., S*BIO Pte Ltd. and each Holder Permitted Transferee, dated May 31, 2012.  Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on DecemberJune 5, 2012.

Exhibit
Number

Exhibit Description

Location

10.41Registration Rights Agreement, among Cell Therapeutics, Inc. and Baxter Healthcare SA, dated November 14, 2013.Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on November 15, 2013.
10.42Form of Securities Purchase Agreement, dated May 28, 2012.Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on May 31, 2012.
  10.4910.43  SettlementForm of Securities Purchase Agreement, and Full and Final Release of Claims dated as of January 4, 2013, by and between Cell Therapeutics, Inc. and Daniel Eramian.September 12, 2013.  Filed herewith.Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on September 18, 2013.
10.44Loan and Security Agreement, dated March 26, 2013, by and among Cell Therapeutics, Inc., Systems Medicine LLC and Hercules Technology Growth Capital, Inc.Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on March 28, 2013.
10.45Stipulation of Settlement, dated February 13, 2012.Incorporated by reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K, filed on February 15, 2012.
10.46Stipulation of Settlement, dated November 6, 2012.Incorporated by reference to Exhibit 99.2 to the Registrant’s Current Report on Form 8-K, filed on March 27, 2013.
10.47†Wholesale Distribution Agreement, dated as of March 26, 2013, by and between CTI Life Sciences Limited and Max Pharma GmbH.Incorporated by reference to Exhibit 10.7 to the Registrant’s Quarterly Report on Form 10-Q, filed on May 2, 2013.
10.48†

Amendment No. 1 to Wholesale Distribution

Agreement, effective June 10, 2013, by and between CTI Life Sciences Limited and Max Pharma GmbH.

Incorporated by reference to Exhibit 10.1 to the Registrant’s Quarterly Report on Form 10-Q, filed on July 31, 2013.
10.49†

Amendment No. 2 to Wholesale Distribution

Agreement, effective June 25, 2013, by and between CTI Life Sciences Limited and Max Pharma GmbH.

Incorporated by reference to Exhibit 10.2 to the Registrant’s Quarterly Report on Form 10-Q, filed on July 31, 2013.
10.50†

Amendment No. 3 to Wholesale Distribution

Agreement, effective July 9, 2013, by and between CTI Life Sciences Limited and Max Pharma GmbH.

Incorporated by reference to Exhibit 10.4 to the Registrant’s Quarterly Report on Form 10-Q, filed on October 30, 2013.
12.1  Statement Re: Computation of Ratio of Earnings to Fixed Charges.  Filed herewith.
21.1  Subsidiaries of the Registrant.  Filed herewith.
23.1  Consent of Marcum LLP, Independent Registered Public Accounting FirmFirm.  Filed herewith.
24.1  Power of Attorney. Contained in the signature page of this Annual Report on Form 10-K and incorporated herein by reference.  Filed herewith.

Exhibit
Number

Exhibit Description

Location

31.1  Certification of Chief Executive Officer pursuant to Section 302 of the Sarbanes-Oxley Act of 2002.  Filed herewith.
31.2  Certification of Chief Financial Officer pursuant to Section 302 of the Sarbanes-Oxley Act of 2002.  Filed herewith.
32  Certification of Chief Executive Officer and Chief Financial Officer pursuant to Section 906 of the Sarbanes-Oxley Act of 2002.  Filed herewith.
99.1

Notice of Pendency and Proposed Settlement of

Action.

Incorporated by reference to Exhibit 99.1 to the Registrant’s Current Report on Form 8-K, filed on March 27, 2013.
101.INS  XBRL Instance  Filed herewith.
101.SCH  XBRL Taxonomy Extension Schema  Filed herewith.
101.CAL  XBRL Taxonomy Extension Calculation  Filed herewith.
101.DEF  XBRL Taxonomy Extension Definition  Filed herewith.
101.LAB  XBRL Taxonomy Extension Labels  Filed herewith.
101.PRE  XBRL Taxonomy Extension Presentation  Filed herewith.

 

*Indicates management contract or compensatory plan or arrangement.

Portions of these exhibits have been omitted pursuant to a request for confidential treatment.

SIGNATURES

Pursuant to the requirements of Section 13 or 15(d) of the Securities Exchange Act of 1934, the Registrant has duly caused this Report to be signed on its behalf by the undersigned, thereunto duly authorized, in the City of Seattle, State of Washington, on February 28, 2013.March 4, 2014.

 

Cell Therapeutics, Inc.
By: 

/s/    James A. Bianco

 James A. Bianco, M.D.
 President and Chief Executive Officer

POWER OF ATTORNEY

KNOW BY ALL PERSONS BY THESE PRESENTS, that each person whose signature appears below constitutes and appoints James A. Bianco and Louis A. Bianco, and each of them his attorney-in-fact, with the power of substitution, for him in any and all capacities, to sign any amendment of post-effective amendment to this Report on Form 10-K and to file the same, with exhibits thereto and other documents in connection therewith, with the SEC, hereby ratifying and confirming all that said attorney-in-fact, or his substitute or substitutes, may do or cause to be done by virtue hereof.

Pursuant to the requirements of the Securities Exchange Act of 1934, this Report has been signed below by the following persons on behalf of the registrant and in the capacities and on the dates indicated.

 

Signature

  

Title

 

Date

/s/    Phillip M. Nudelman        

Phillip M. Nudelman, Ph.D.

  

Chairman of the Board and Director

 February 28, 2013March 4, 2014

/s/    James A. Bianco        

James A. Bianco, M.D.

  

President, Chief Executive Officer and Director (Principal Executive Officer)

 February 28, 2013March 4, 2014

/s/    Louis A. Bianco

Louis A. Bianco

  

Executive Vice President, Finance and Administration (Principal Financial Officer and Principal Accounting Officer)

 February 28, 2013March 4, 2014

/s/    John H. Bauer

John H. Bauer

  

Director

 February 28, 2013March 4, 2014

/s/    Vartan Gregorian

Vartan Gregorian, Ph.D.

  

Director

 February 28, 2013March 4, 2014

/s/    Karen Ignagni        

Karen Ignagni

Director

March 4, 2014

/s/    Richard L. Love

Richard Love

  

Director

 February 28, 2013March 4, 2014

/s/    Mary O. Mundinger

Mary O. Mundinger, DrPH

  

Director

 February 28, 2013March 4, 2014

/s/    Jack W. Singer

Jack W. Singer, M.D.

  

Director

 February 28, 2013March 4, 2014

/s/    Frederick W. Telling

Frederick Telling, Ph.D.

  

Director

 February 28, 2013March 4, 2014

/s/    Reed V. Tuckson.

Reed V. Tuckson, M.D.

  

Director

 February 28, 2013March 4, 2014

 

147116