UNITED STATES
 
SECURITIES AND EXCHANGE COMMISSION

Washington,, D.C. 20549


FORM 10-Q 10-Q

(mark one)
x
Quarterly Report Pursuant to Section 13 or 15(d) of the Securities Exchange Act of 1934 for the Quarter Ended JuneMarch 28, 2008
2009

oTransition Report Pursuant to Section 13 or 15(d) of the Securities Exchange Act of 1934

Commission File Number 1-8002

THERMO FISHER SCIENTIFIC INC.
(Exact name of Registrant as specified in its charter)

Delaware04-2209186
(State of incorporation or organization)
(I.R.S. Employer Identification No.)
  
81 Wyman Street 
Waltham, Massachusetts02451
(Address of principal executive offices)(Zip Code)

Registrant’s telephone number, including area code: (781) 622-1000

Indicate by check mark whether the Registrant (1) has filed all reports required to be filed by Section 13 or 15(d) of the Securities Exchange Act of 1934 during the preceding 12 months and (2) has been subject to such filing requirements for the past 90 days.  Yes x  No o

Indicate by check mark whether the Registrant has submitted electronically and posted on its corporate Web site, if any, every Interactive Data File required to be submitted and posted pursuant to Rule 405 of Regulation S-T during the preceding 12 months (or for such shorter period that the Registrant was required to submit and post such files).
Yes o  No o

Indicate by check mark whether the Registrant is a large accelerated filer, an accelerated filer, a non-accelerated filer or a smaller reporting company. See the definitions of “large accelerated filer,” “accelerated filer” and “smaller reporting company” in Rule 12b-2 of the Exchange Act.
Large accelerated filer x  Accelerated filer o  Non-accelerated filer o  Smaller reporting company o

Indicate by check mark whether the Registrant is a shell company (as defined in Rule 12b-2 of the Exchange Act).   Yes o  No x

Indicate the number of shares outstanding of each of the issuer’s classes of Common Stock, as of the latest practicable date.
 


Class Outstanding at JuneMarch 28, 20082009
Common Stock, $1.00 par value 419,013,598418,312,802

 
 



 
 

 
PART I — FINANCIAL INFORMATION

Item 1 .       Financial Statements

THERMO FISHER SCIENTIFIC INC.

Consolidated Balance Sheet
(Unaudited)

  June 28, December 31, 
(In millions) 2008 2007 
      
Assets     
Current Assets:     
Cash and cash equivalents
 $1,006.9 $625.1 
    Short-term investments, at quoted market value (amortized cost of $13.4 and $13.6)
  13.5  14.1 
Accounts receivable, less allowances of $48.3 and $49.5
  1,599.1  1,450.0 
Inventories:
       
  Raw materials
  348.4  316.5 
  Work in process
  117.8  118.4 
  Finished goods
  797.9  735.0 
Deferred tax assets
  167.9  195.8 
Other current assets
  248.0  210.4 
        
   4,299.5  3,665.3 
        
Property, Plant and Equipment, at Cost  1,851.6  1,716.5 
Less: Accumulated depreciation and amortization
  547.1  449.1 
        
   1,304.5  1,267.4 
        
Acquisition-related Intangible Assets, net of Accumulated Amortization of $1,187.5 and $877.8  6,950.2  7,157.8 
        
Other Assets  408.5  403.7 
        
Goodwill  8,718.3  8,713.2 
        
  $21,681.0 $21,207.4 
  March 28, December 31, 
(In millions) 2009 2008 
      
Assets     
Current Assets:     
      Cash and cash equivalents $1,561.1 $1,280.5 
          Short-term investments, at quoted market value (amortized cost of $9.4 and $8.5)  9.0  7.5 
Accounts receivable, less allowances of $43.7 and $43.1
  1,423.2  1,478.1 
Inventories:
       
            Raw materials  305.0  310.6 
            Work in process  126.3  120.3 
            Finished goods  730.4  740.5 
Deferred tax assets
  152.4  161.7 
Other current assets
  212.0  246.7 
        
   4,519.4  4,345.9 
        
Property, Plant and Equipment, at Cost  1,852.9  1,854.8 
Less: Accumulated depreciation and amortization
  (603.6) (579.5)
        
   1,249.3  1,275.3 
        
Acquisition-related Intangible Assets, net of Accumulated Amortization of $1,566.7 and $1,433.2  6,230.6  6,423.2 
        
Other Assets  370.6  367.9 
        
Goodwill  8,663.2  8,677.7 
        
  $21,033.1 $21,090.0 

 
2

 
THERMO FISHER SCIENTIFIC INC.

Consolidated Balance Sheet (continued)
(Unaudited)

  June 28, December 31, 
(In millions except share amounts) 2008 2007 
      
Liabilities and Shareholders’ Equity     
Current Liabilities:     
Short-term obligations and current maturities of long-term obligations
 $145.3 $149.3 
Accounts payable
  653.0  676.9 
Accrued payroll and employee benefits
  265.3  295.1 
Accrued income taxes
  82.5  64.2 
Deferred revenue
  156.4  128.5 
Other accrued expenses
  577.6  587.6 
        
   1,880.1  1,901.6 
        
Deferred Income Taxes  2,200.0  2,279.9 
        
Other Long-term Liabilities  486.4  491.7 
        
Long-term Obligations  2,044.5  2,045.9 
        
Shareholders’ Equity:       
    Preferred stock, $100 par value, 50,000 shares authorized; none issued
       
      Common stock, $1 par value, 1,200,000,000 shares authorized; 445,326,568 and 439,340,851 shares issued  445.3  439.3 
      Capital in excess of par value  12,386.5  12,283.4   
      Retained earnings  3,017.0  2,534.5 
      Treasury stock at cost, 26,312,970 and 24,102,880 shares  (1,282.1) (1,157.3)
      Accumulated other comprehensive items  503.3  388.4 
        
   15,070.0  14,488.3 
        
  $21,681.0 $21,207.4 



  March 28, December 31, 
(In millions except share amounts) 2009 2008 
      
Liabilities and Shareholders’ Equity     
Current Liabilities:     
Short-term obligations and current maturities of long-term obligations
 $15.6 $14.8 
Accounts payable
  607.3  539.5 
Accrued payroll and employee benefits
  211.3  296.2 
Accrued income taxes
  54.2  32.9 
Deferred revenue
  145.6  135.3 
Other accrued expenses
  465.6  521.5 
        
   1,499.6  1,540.2 
        
Deferred Income Taxes  1,928.3  1,994.2 
        
Other Long-term Liabilities  588.2  601.7 
        
Long-term Obligations  2,011.1  2,003.2 
        
Incremental Convertible Debt Obligation  13.4  24.2 
        
Shareholders’ Equity:       
          Preferred stock, $100 par value, 50,000 shares authorized; none issued       
Common stock, $1 par value, 1,200,000,000 shares authorized; 422,256,541 and 421,791,009 shares issued
  422.3  421.8 
Capital in excess of par value
  11,334.3  11,301.3 
Retained earnings
  3,649.4  3,500.5 
Treasury stock at cost, 3,943,739 and 3,825,245 shares
  (155.6) (151.3)
Accumulated other comprehensive items
  (257.9) (145.8)
        
   14,992.5  14,926.5 
        
  $21,033.1 $21,090.0 











The accompanying notes are an integral part of these consolidated financial statements.

 
3

 
THERMO FISHER SCIENTIFIC INC.

Consolidated Statement of Income
(Unaudited)
  Three Months Ended 
  June 28, June 30, 
(In millions except per share amounts) 2008 2007 
      
Revenues $2,709.6 $2,385.9 
        
Costs and Operating Expenses:       
Cost of revenues
  1,621.5  1,449.3 
Selling, general and administrative expenses
  698.9  626.6 
Research and development expenses
  64.4  58.7 
Restructuring and other costs (income), net
  (5.4) 8.3 
        
   2,379.4  2,142.9 
        
Operating Income  330.2  243.0 
Other Expense, Net  (22.7) (20.7)
        
Income from Continuing Operations Before Provision for Income Taxes  307.5  222.3 
Provision for Income Taxes  (61.2) (34.4)
        
Income from Continuing Operations  246.3  187.9 
    Gain (Loss) on Disposal of Discontinued Operations (includes income tax provision of $1.9 and $1.8)  3.2  (24.0)
        
Net Income $249.5 $163.9 
        
Earnings per Share from Continuing Operations       
Basic
 $.59 $.44 
        
Diluted
 $.56 $.42 
        
Earnings per Share       
Basic
 $.60 $.39 
        
Diluted
 $.57 $.37 
        
Weighted Average Shares       
Basic
  418.0  424.0 
        
Diluted
  437.2  446.5 




  Three Months Ended 
  March 28, March 29, 
(In millions except per share amounts) 2009 2008 
      
Revenues     
Product revenues
 $1,898.6 $2,160.2 
Service revenues
  356.5  393.8 
        
   2,255.1  2,554.0 
        
Costs and Operating Expenses:       
Cost of product revenues
  1,159.7  1,292.2 
Cost of service revenues
  208.5  243.4 
Selling, general and administrative expenses
  625.0  661.1 
Research and development expenses
  58.2  62.0 
Restructuring and other costs, net
  13.6  4.9 
        
   2,065.0  2,263.6 
        
Operating Income  190.1  290.4 
Other Expense, Net  (22.9) (18.2)
        
Income from Continuing Operations Before Provision for Income Taxes  167.2  272.2 
Provision for Income Taxes  (18.3) (42.1)
        
Income from Continuing Operations  148.9  230.1 
    Loss on Disposal of Discontinued Operations    (0.4)
        
Net Income $148.9 $229.7 
        
Earnings per Share from Continuing Operations       
Basic
 $.36 $.55 
        
Diluted
 $.35 $.53 
        
Earnings per Share       
Basic
 $.36 $.55 
        
Diluted
 $.35 $.53 
        
Weighted Average Shares       
Basic
  417.7  417.5 
        
Diluted
  425.3  436.1 




The accompanying notes are an integral part of these consolidated financial statements.

 
4

 
THERMO FISHER SCIENTIFIC INC.

Consolidated Statement of IncomeCash Flows
(Unaudited)
  Six Months Ended 
  June 28, June 30, 
(In millions except per share amounts) 2008 2007 
      
Revenues $5,263.6 $4,724.1 
        
Costs and Operating Expenses:       
Cost of revenues
  3,157.1  2,907.6 
Selling, general and administrative expenses
  1,360.0  1,246.9 
Research and development expenses
  126.4  118.5 
Restructuring and other costs (income), net
  (0.5) 15.7 
        
   4,643.0  4,288.7 
        
Operating Income  620.6  435.4 
Other Expense, Net  (35.5) (47.4)
        
Income from Continuing Operations Before Provision for Income Taxes  585.1  388.0 
Provision for Income Taxes  (105.4) (61.3)
        
Income from Continuing Operations  479.7  326.7 
    Income from Discontinued Operations (net of income tax provision of $0.1 in 2007)    0.1 
    Gain (Loss) on Disposal of Discontinued Operations (includes income tax provision of $1.9 and $1.8)  2.8  (24.0)
        
Net Income $482.5 $302.8 
        
Earnings per Share from Continuing Operations       
Basic
 $1.15 $.77 
        
Diluted
 $1.10 $.74 
        
Earnings per Share       
Basic
 $1.15 $.72 
        
Diluted
 $1.10 $.68 
        
Weighted Average Shares       
Basic
  417.8  422.0 
        
Diluted
  436.7  443.8 


  Three Months Ended 
  March 28, March 29, 
(In millions) 2009 2008 
      
Operating Activities     
Net income
 $148.9 $229.7 
Loss on disposal of discontinued operations
    0.4 
        
Income from continuing operations
  148.9  230.1 
        
          Adjustments to reconcile income from continuing operations to net cash provided by operating activities:       
            Depreciation and amortization  190.3  198.8 
            Change in deferred income taxes  (56.7) (10.4)
            Non-cash stock-based compensation  15.2  11.0 
            Non-cash interest expense on convertible debt  5.6  5.4 
                Non-cash charges for sale of inventories revalued at the date of acquisition    0.4 
            Tax benefits from stock-based compensation awards  (0.6) (7.1)
            Other non-cash expenses, net  11.1  11.8 
               Changes in assets and liabilities, excluding the effects of acquisitions and dispositions:       
                 Accounts receivable  29.0  (96.2)
                 Inventories  (11.8) (44.6)
                 Other assets  28.9  (29.6)
                 Accounts payable  81.5  45.5 
                 Other liabilities  (76.9) (67.9)
                 Contributions to retirement plans  (5.6) (4.0)
        
                        Net cash provided by continuing operations  358.9  243.2 
                        Net cash used in discontinued operations  (0.2) (0.2)
        
                        Net cash provided by operating activities  358.7  243.0 
        
Investing Activities       
Acquisitions, net of cash acquired
  (18.3) (3.8)
Purchases of property, plant and equipment
  (51.2) (54.1)
Proceeds from sale of property, plant and equipment
  3.4  0.8 
Proceeds from sale of available-for-sale investments
    0.6 
Purchases of available-for-sale investments
    (0.1)
         Proceeds from sale of business, net of cash divested  2.3   
Increase in other assets
  (1.9) (0.2)
        
                        Net cash used in continuing operations  (65.7) (56.8)
                        Net cash provided by discontinued operations    0.2 
        
                        Net cash used in investing activities $(65.7)$(56.6)




The accompanying notes are an integral part of these consolidated financial statements.

 
5

 
THERMO FISHER SCIENTIFIC INC.

Consolidated Statement of Cash Flows
(Unaudited)
  Six Months Ended 
  June 28, June 30, 
(In millions) 2008 2007 
      
Operating Activities     
Net income
 $482.5 $302.8 
Income from discontinued operations
    (0.1)
(Gain) Loss on disposal of discontinued operations
  (2.8) 24.0 
        
Income from continuing operations
  479.7  326.7 
        
    Adjustments to reconcile income from continuing operations to net cash provided by operating activities:
       
            Depreciation and amortization  398.6  372.4 
            Change in deferred income taxes  (60.1) (10.3)
            Noncash equity compensation  27.7  26.1 
  Noncash charges for sale of inventories revalued at the date of acquisition
  0.4  47.6 
            Tax benefits from exercised stock options  (12.2) (17.0)
            Other noncash expenses, net  6.4  18.8 
  Changes in assets and liabilities, excluding the effects of acquisitions and dispositions:
       
                  Accounts receivable  (101.3) (41.7)
                  Inventories  (64.1) (57.8)
                  Other assets  (20.3) (25.6)
                  Accounts payable  (36.9) (17.2)
                  Other liabilities  (19.1) (60.7)
                  Contributions to retirement plans  (8.5) (4.9)
        
                        Net cash provided by continuing operations  590.3  556.4 
                        Net cash used in discontinued operations  (0.8) (2.3)
        
                        Net cash provided by operating activities  589.5  554.1 
        
Investing Activities       
Acquisitions, net of cash acquired
  (43.0) (39.1)
Refund of acquisition purchase price
    4.6 
Proceeds from sale of business
  3.5   
Proceeds from sale of available-for-sale investments
  0.6  1.7 
Purchases of available-for-sale investments
  (0.1) (1.8)
Purchases of property, plant and equipment
  (109.3) (71.8)
Proceeds from sale of property, plant and equipment
  5.5  14.1 
Collection of notes receivable
    48.2 
Increase in other assets
  (5.2) (18.3)
        
                        Net cash used in continuing operations  (148.0) (62.4)
                        Net cash provided by discontinued operations  0.4  28.8 
        
                        Net cash used in investing activities $(147.6)$(33.6)

6

THERMO FISHER SCIENTIFIC INC.

Consolidated Statement of Cash Flows (continued)
(Unaudited)

  Six Months Ended 
  June 28, June 30, 
(In millions) 2008 2007 
      
Financing Activities     
Decrease in short-term notes payable
 $(13.4)$(452.5)
Purchases of company common stock
  (102.0)  
Net proceeds from issuance of company common stock
  49.1  223.6 
Tax benefits from exercised stock options
  12.2  17.0 
Redemption and repayment of long-term obligations
  (2.2) (8.7)
        
                        Net cash used in financing activities  (56.3) (220.6)
        
Exchange Rate Effect on Cash of Continuing Operations  (3.8) (16.1)
        
Increase in Cash and Cash Equivalents  381.8  283.8 
Cash and Cash Equivalents at Beginning of Period  625.1  667.4 
        
Cash and Cash Equivalents at End of Period $1,006.9 $951.2 
        
Supplemental Cash Flow Information       
Fair value of assets of acquired businesses
 $53.7 $39.8 
Cash paid for acquired businesses
  (31.5) (30.8)
        
  Liabilities assumed of acquired businesses
 $22.2 $9.0 
        
Conversion of subordinated convertible debentures
 $ $0.4 
        
Issuance of restricted stock
 $21.3 $0.2 
        
Issuance of stock upon vesting of restricted stock units
 $19.3 $16.1 
  Three Months Ended 
  March 28, March 29, 
(In millions) 2009 2008 
      
Financing Activities     
Increase (decrease) in short-term notes payable
 $0.6 $(0.9)
Purchases of company common stock
    (102.0)
Net proceeds from issuance of company common stock
  5.2  28.5 
Tax benefits from stock-based compensation awards
  0.6  7.1 
Borrowings (redemption and repayment) of long-term obligations
  3.4  (0.4)
        
                        Net cash provided by (used in) financing activities`  9.8  (67.7)
        
Exchange Rate Effect on Cash of Continuing Operations  (22.2) (9.8)
        
Increase in Cash and Cash Equivalents  280.6  108.9 
Cash and Cash Equivalents at Beginning of Period  1,280.5  625.1 
        
Cash and Cash Equivalents at End of Period $1,561.1 $734.0 
        
Supplemental Cash Flow Information       
Fair value of assets of acquired businesses
 $10.4 $3.0 
Cash paid for acquired businesses
  7.7  (3.0)
        
            Liabilities assumed of acquired businesses $2.7 $ 
        
Issuance of restricted stock
 $ $19.1 
        
Issuance of stock upon vesting of restricted stock units
 $6.6 $17.8 



















The accompanying notes are an integral part of these consolidated financial statements.

 
76

 
THERMO FISHER SCIENTIFIC INC.

Notes to Consolidated Financial Statements
(Unaudited)

1.General

The interim consolidated financial statements presented herein have been prepared by Thermo Fisher Scientific Inc. (the company or Thermo Fisher), are unaudited and, in the opinion of management, reflect all adjustments of a normal recurring nature necessary for a fair statement of the financial position at JuneMarch 28, 2008,2009, the results of operations for the three- and six-monththree-month periods ended JuneMarch 28, 2008,2009, and June 30, 2007,March 29, 2008, and the cash flows for the three- and six-monththree-month periods ended JuneMarch 28, 2008,2009, and June 30, 2007.March 29, 2008. Interim results are not necessarily indicative of results for a full year.

The consolidated balance sheet presented as of December 31, 2007,2008, has been derived from the audited consolidated financial statements as of that date.date, as adjusted for adoption of a new accounting pronouncement, discussed below. The consolidated financial statements and notes are presented as permitted by Form 10-Q and do not contain all of the information that is included in the annual financial statements and notes of the company. The consolidated financial statements and notes included in this report should be read in conjunction with the financial statements and notes included in the company’s Annual Report on Form 10-K for the fiscal year ended December 31, 2007,2008, filed with the Securities and Exchange Commission (SEC).

In May 2008, the FASB issued FSP APB No. 14-1, “Accounting for Convertible Debt Instruments That May Be Settled in Cash Upon Conversion (Including Partial Cash Settlement).” FSP APB No. 14-1 requires the issuers of certain convertible debt instruments that may be settled in cash (or other assets) on conversion to separately account for the liability (debt) and equity (conversion option) components in a manner that reflects the issuer’s nonconvertible debt borrowing rate when interest cost is recognized in subsequent periods. FSP ABP No. 14-1 was effective for the company beginning January 1, 2009. The rule required restatement of prior periods to conform to current accounting.

The incremental effect of applying FSP APB No. 14-1 on individual line items in the consolidated balance sheet at December 31, 2008, was as follows:

(Dollars in millions) 
Before
Adoption
of FSP APB No. 14-1
 
Cumulative
Effect of
Adopting
FSP APB
No. 14-1
 As Adjusted 
        
Deferred Income Taxes $1,978.0 $16.2 $1,994.2 
Long-term Obligations  2,043.5  (40.3) 2,003.2 
Incremental Convertible Debt Obligation    24.2  24.2 
Capital in Excess of Par Value  11,273.2  28.1  11,301.3 
Retained Earnings  3,528.7  (28.2) 3,500.5 

7

THERMO FISHER SCIENTIFIC INC.

1.General (continued)

The incremental effect of applying FSP APB No. 14-1 on individual line items in the consolidated statement of income for the three months ended March 29, 2008, was as follows:

(Dollars in millions) 
Before
Adoption
of FSP APB
 No. 14-1
 
Effect of
Adopting
FSP APB
No. 14-1
 As Adjusted 
        
Other Expense, Net $12.8 $5.4 $18.2 
Provision for Income Taxes  44.2  (2.1) 42.1 
Income from Continuing Operations  233.4  (3.3) 230.1 
Net Income  233.0  (3.3) 229.7 
Earnings per Share from Continuing Operations          
Basic
 $.56 $(.01)$.55 
Diluted
 $.54 $(.01)$.53 
Earnings per Share          
Basic
 $.56 $(.01)$.55 
Diluted
 $.53 $ $.53 

2.Acquisitions

In December 2007, the FASB issued SFAS No. 141R, “Business Combinations.” SFAS No. 141R does the following: requires the acquiring entity in a business combination to recognize all (and only) the assets acquired and liabilities assumed in the transaction; establishes the acquisition-date fair value as the measurement objective for all assets acquired and liabilities assumed; and requires the acquirer to disclose certain information to enable users to understand the nature and financial effect of the business combination. The statement requires that cash outflows such as transaction costs and post-acquisition restructuring be charged to expense instead of capitalized as a cost of the acquisition. Contingent purchase price will be recorded at its initial fair value and then re-measured as time passes through adjustments to net income. SFAS No. 141R was effective for the company, on a prospective basis, beginning January 1, 2009. The company applied this standard to the acquisition discussed below. There was no material impact upon adoption of the standard; however, this statement may materially affect the accounting for any future business combinations.

In the first sixthree months of 2008,2009, the Analytical Technologies segment acquired the intellectual property of an immunohistochemistry control slide business and an India-based manufacturer and distributor of analytical instruments serving the life sciences and environmental industries. The Laboratory Products and Services segment acquired a European-basedSpain-based distributor of laboratory instrumentation and equipment, and consumables. Aggregate consideration was $32 million cash plusfor $8 million of assumed debt, and up to $4 million of additional future payments based on the achievement of specified milestones and operating results.million. The company also paid purchase price obligations transaction costs and post-closing purchase price adjustments aggregating $11of $10 million in the first sixthree months of 2008,2009, for several acquisitions completed prior to 2008.2009.

The company’s acquisitions have historically been made at prices above the fair value of the acquired assets, resulting in goodwill, due to expectations of synergies of combining the businesses. These synergies include elimination of duplicativeredundant facilities, functions and staffing; use of the company’s existing commercial infrastructure such as sales force, distribution channels and customer relations to expand sales of the acquired businesses’ products; and use of the commercial infrastructure of the acquired businesses to cost effectively expand sales of company products.

Acquisitions have been accounted for using the purchase method of accounting, and the acquired companies’ results have been included in the accompanying financial statements from their respective dates of acquisition. Allocation of the purchase price for acquisitions was based on estimates of the fair value of the net assets acquired and, for acquisitions recently completed, within the past year, is subject to adjustment upon finalization of the purchase price allocation. The company is not aware of any information that indicates the final purchase price allocations will differ materially from the preliminary estimates.

The company’s results for 2008 or 2009 would not have been materially different from its reported results had the company’s 2008 and 2009 acquisitions occurred at the beginning of 2008.

 
8

 
THERMO FISHER SCIENTIFIC INC.

2.Acquisitions (continued)

The components of the preliminary purchase price allocation for 2008 acquisitions are as follows:

(In millions) Total 
    
Purchase Price:   
Cash Paid Including Transaction Costs
 $32.4 
Debt Assumed
  7.7 
Cash Acquired
  (0.9)
         
  $39.2 
     
Allocation:    
Current assets
 $19.1 
Property, plant and equipment
  6.1 
Customer relationships
  8.1 
Product technology
  3.3 
Tradenames and other
  6.3 
Goodwill
  10.6 
Other assets
  0.2 
Liabilities assumed
  (14.5)
     
  $39.2 

The company’s results for 2007 or 2008 would not have been materially different from its reported results had the company’s 2007 and 2008 acquisitions occurred at the beginning of 2007.Disposition

The company has undertaken restructuring activities at acquired businesses. These activities, which were accounted forsold a small business unit in accordance with Emerging Issues Task Force (EITF) Issue No. 95-3, “Recognitionthe first quarter of Liabilities in Connection with2009 and recorded a Purchase Business Combination,” have primarily included reductions in staffing levels and the abandonmentgain of excess facilities. In connection with these restructuring activities, as part of the cost of acquisitions, the company established reserves, primarily for severance and excess facilities. In accordance with EITF Issue No. 95-3, the company finalizes its restructuring plans no later than one year from the respective dates of the acquisitions. Upon finalization of restructuring plans or settlement of obligations for less than the expected amount, any excess reserves are reversed with a corresponding decrease in goodwill or other intangible assets when no goodwill exists. Accrued acquisition expenses are$0.9 million, included in restructuring and other accrued expensescosts, net, in the accompanying balance sheet. No accrued acquisition expenses have been established for 2008 acquisitions.

statement of income. The changes in accrued acquisition expenses for acquisitions completed prior to 2008 are as follows:
(In millions) 
 Severance
  
 Abandonment
of Excess
Facilities
  Other   Total 
            
Balance at December 31, 2007 $3.6  $5.5 $0.4  $9.5 
Reserves established  0.1   0.4     0.5 
Payments  (0.4)  (1.4) (0.1)  (1.9)
Decrease recorded as a reduction in goodwill  (1.4)  (0.6) (0.2)  (2.2)
Currency translation     (0.1)    (0.1)
                
Balance at June 28, 2008 $1.9  $3.8 $0.1  $5.8 

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THERMO FISHER SCIENTIFIC INC.

2.Acquisitions (continued)

The remaining amounts accrued for pre-2008 acquisitions include severance and facility obligations for various facility consolidations, primarily related to the company’s merger with Fisher Scientific International Inc. in November 2006. The amounts captioned as “other” primarily represent employee relocation, contract termination and other exit costs. The severance and other costs are expected to be paid through 2009. The abandoned facilities costs are expected to be paid over the remaining termsnet cash proceeds were $2.3 million. Operating results of the leases through 2010.business were not material.

3.Business Segment Information

The company’s continuing operations fall into two business segments: Analytical Technologies and Laboratory Products and Services. During the first quarter of 2008,2009, the company transferred management responsibility and the related financial reporting and monitoring for severala small product linesline between segments. The company has historically moved a product line between segments when a shift in strategic focus of either the product line or a segment more closely aligns the product line with a segment different than that in which it had previously been reported. Prior period segment information has been reclassified to reflect these transfers.

  Three Months Ended  Six Months Ended 
  June 28, June 30, June 28, June 30, 
(In millions) 2008 2007 2008 2007 
          
Revenues         
Analytical Technologies
 $1,160.6 $1,020.4 $2,248.0 $2,008.7 
Laboratory Products and Services
  1,656.4  1,449.7  3,224.8  2,883.2 
      Eliminations  (107.4) (84.2) (209.2) (167.8)
              
            Consolidated revenues $2,709.6 $2,385.9 $5,263.6 $4,724.1 
              
Operating Income             
Analytical Technologies (a)
 $245.1 $201.9 $473.8 $387.3 
Laboratory Products and Services (a)
  231.5  202.7  449.9  392.8 
              
  Subtotal reportable segments (a)
  476.6  404.6  923.7  780.1 
              
Cost of revenues charges
  (0.2) (11.2) (0.8) (47.6)
Restructuring and other income (costs), net
  5.4  (8.3) 0.5  (15.7)
  Amortization of acquisition-related intangible assets
  (151.6) (142.1) (302.8) (281.4)
              
  Consolidated operating income
  330.2  243.0  620.6  435.4 
Other expense, net (b)
  (22.7) (20.7) (35.5) (47.4)
              
  Income from continuing operations before provision for income taxes
 $307.5 $222.3 $585.1 $388.0 
              
Depreciation             
Analytical Technologies
 $22.5 $20.2 $44.3 $40.5 
Laboratory Products and Services
  25.7  24.8  51.5  50.5 
              
  Consolidated depreciation
 $48.2 $45.0 $95.8 $91.0 
  Three Months Ended 
  March 28, March 29, 
(In millions) 2009 2008 
      
Revenues     
Analytical Technologies
 $938.8 $1,086.8 
Laboratory Products and Services
  1,423.0  1,568.8 
      Eliminations  (106.7) (101.6)
        
            Consolidated revenues $2,255.1 $2,554.0 
        
Operating Income       
Analytical Technologies (a)
 $173.5 $228.3 
Laboratory Products and Services (a)
  175.5  218.8 
        
            Subtotal reportable segments (a)  349.0  447.1 
        
Cost of revenues charges
    (0.6)
      Restructuring and other costs, net  (13.6) (4.9)
      Amortization of acquisition-related intangible assets  (145.3) (151.2)
        
            Consolidated operating income  190.1  290.4 
Other expense, net (b)
  (22.9) (18.2)
        
      Income from continuing operations before provision for income taxes $167.2 $272.2 
        
Depreciation       
Analytical Technologies
 $20.3 $21.8 
Laboratory Products and Services
  24.7  25.8 
        
            Consolidated depreciation $45.0 $47.6 

(a)Represents operating income before certain charges to cost of revenues; restructuring and other costs, net and amortization of acquisition-related intangibles.
(b)The company does not allocate other income and expenses to its segments.

 
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THERMO FISHER SCIENTIFIC INC.

4.Other Expense, Net

As discussed in Note 1, although the company’s cash interest payments have not been affected, the adoption of FSP APB No. 14-1 has increased the company’s reported interest expense in a manner that reflects interest rates of similar non-convertible debt. The rule required restatement of prior periods to conform to current accounting.

The components of other expense, net, in the accompanying statement of income are as follows:

  Three Months Ended Six Months Ended  
  June 28, June 30, June 28, June 30, 
(In millions) 2008 2007 2008 2007 
          
Interest Income $15.1 $10.6 $25.2 $19.5 
Interest Expense  (36.6) (33.2) (67.0) (70.4)
Other Items, Net  (1.2) 1.9  6.3  3.5 
              
  $(22.7)$(20.7)$(35.5)$(47.4)
  Three Months Ended 
  March 28, March 29, 
(In millions) 2009 2008 
      
Interest Income $5.3 $10.1 
Interest Expense  (30.2) (35.8)
Other Items, Net  2.0  7.5 
        
  $(22.9)$(18.2)

5.Earnings per Share

In June 2008, the FASB issued FSP EITF 03-6-1, “Determining Whether Instruments Granted in Share-Based Payment Transactions Are Participating Securities.” FSP EITF 03-6-1 clarifies that share-based payment awards that entitle their holders to receive nonforfeitable dividends before vesting should be considered participating securities. FSP EITF 03-6-1 was effective for the company beginning January 1, 2009. The rule required restatement of prior periods to conform to current accounting. Adoption had a nominal effect on the numerator and denominator in the calculation of 2008 earnings per share.

Basic and diluted earnings per share were calculated as follows:

  Three Months Ended  Six Months Ended 
  June 28, June 30, June 28, June 30, 
(In millions except per share amounts) 2008 2007 2008 2007 
          
Income from Continuing Operations $246.3 $187.9 $479.7 $326.7 
Income from Discontinued Operations        0.1 
    Gain (Loss) on Disposal of Discontinued Operations  3.2  (24.0) 2.8  (24.0)
              
Income Available to Common Shareholders $249.5 $163.9 $482.5 $302.8 
              
Basic Weighted Average Shares  418.0  424.0  417.8  422.0 
Effect of:             
Convertible debentures
  15.5  13.7  15.1  12.7 
Stock options, restricted stock awards and warrants
  3.7  8.8  3.8  9.1 
              
Diluted Weighted Average Shares  437.2  446.5  436.7  443.8 
              
Basic Earnings per Share             
Continuing operations
 $.59 $.44 $1.15 $.77 
Discontinued operations
  .01  (.06) .01  (.06)
              
  $.60 $.39 $1.15 $.72 
              
Diluted Earnings per Share             
Continuing operations
 $.56 $.42 $1.10 $.74 
  Discontinued operations
  .01  (.05) .01  (.05)
              
  $.57 $.37 $1.10 $.68 
  Three Months Ended 
  March 28, March 29, 
(In millions except per share amounts) 2009 2008 
      
Income from Continuing Operations $148.9 $230.1 
    Loss on Disposal of Discontinued Operations    (0.4)
        
    Net Income  148.9  229.7 
        
Income Allocable to Participating Securities  (0.2) (0.4)
        
Net Income for Earnings per Share $148.7 $229.3 
        
Basic Weighted Average Shares  417.7  417.5 
Effect of:       
Convertible debentures
  6.4  14.6 
Stock options, restricted stock awards and warrants
  1.2  4.0 
        
Diluted Weighted Average Shares  425.3  436.1 

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THERMO FISHER SCIENTIFIC INC.

5.Earnings per Share (continued)

  Three Months Ended 
  March 28, March 29, 
(In millions except per share amounts) 2009 2008 
      
Basic Earnings per Share     
Continuing operations
 $.36 $.55 
Discontinued operations
     
        
  $.36 $.55 
        
Diluted Earnings per Share       
Continuing operations
 $.35 $.53 
Discontinued operations
     
        
  $.35 $.53 

Options to purchase 0.8 million, 5.8 million, 2.316.7 million and 5.83.9 million shares of common stock were not included in the computation of diluted earnings per share for the secondfirst quarter of 20082009 and 2007 and the first six months of 2008, and 2007, respectively, because their effect would have been antidilutive.

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THERMO FISHER SCIENTIFIC INC.

6.Comprehensive Income and Shareholders’ Equity

Comprehensive income combines net income and other comprehensive items. Other comprehensive items represent certain amounts that are reported as components of shareholders’ equity in the accompanying balance sheet, including currency translation adjustments; unrealized gains and losses, net of tax, on available-for-sale investments and hedging instruments; and pension and other postretirement benefit liability adjustments. During the secondfirst quarter of 20082009 and 2007,2008, the company had comprehensive income of $242$37 million and $168$352 million, respectively. DuringThe first quarter of 2009 was unfavorably affected by a reduction in the cumulative translation adjustment of $113 million due to movements in currency exchange rates, the effects of which are recorded in shareholders’ equity. The first six monthsquarter of 2008 and 2007,was favorably affected by an increase in the company had comprehensive incomecumulative translation adjustment of $597 million and $372 million, respectively.$122 million.

7.Stock-based Compensation Expense

The components of pre-tax stock-based compensation are as follows:

  Three Months Ended  Six Months Ended  
  June 28, June 30, June 28, June 30, 
(In millions) 2008 2007 2008 2007 
          
Stock Option Awards $9.3 $8.3 $16.0 $17.6 
Restricted Share/Unit Awards  7.4  4.0  11.7  8.5 
              
Total Stock-based Compensation Expense $16.7 $12.3 $27.7 $26.1 
  Three Months Ended 
  March 28, March 29, 
(In millions) 2009 2008 
      
Stock Option Awards $10.1 $6.7 
Restricted Share/Unit Awards  5.1  4.3 
        
Total Stock-based Compensation Expense $15.2 $11.0 

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THERMO FISHER SCIENTIFIC INC.

7.Stock-based Compensation Expense (continued)

Stock-based compensation expense is included in the accompanying statement of income as follows:

  Three Months Ended  Six Months Ended  
  June 28, June 30, June 28, June 30, 
(In millions) 2008 2007 2008 2007 
          
Cost of Revenues $0.9 $0.8 $2.0 $2.1 
Selling, General and Administrative Expenses  15.3  10.9  24.9  22.9 
Research and Development Expenses  0.5  0.6  0.8  1.1 
              
Total Stock-based Compensation Expense $16.7 $12.3 $27.7 $26.1 
  Three Months Ended 
  March 28, March 29, 
(In millions) 2009 2008 
      
Cost of Revenues $1.5 $1.1 
Selling, General and Administrative Expenses  13.2  9.6 
Research and Development Expenses  0.5  0.3 
        
Total Stock-based Compensation Expense $15.2 $11.0 

No stock-based compensation expense has been capitalized in inventories due to immateriality.

Unrecognized compensation cost related to unvested stock options and restricted stock totaled approximately $89$116.1 million and $32$47.6 million, respectively, as of JuneMarch 28, 2008,2009, and is expected to be recognized over weighted average periods of 2.92.6 years and 2.22.5 years, respectively.

During the first six monthsquarter of 2008,2009, the company made equity compensation grants to employees consisting of 387,0001.0 million restricted sharesunits and options to purchase 4,156,0006.2 million shares.

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THERMO FISHER SCIENTIFIC INC.

8.Defined Benefit Pension Plans

Employees of a number of the company’s non-U.S. and certain U.S. subsidiaries participate in defined benefit pension plans covering substantially all full-time employees at those subsidiaries. Some of the plans are unfunded, as permitted under the plans and applicable laws. The company also has a postretirement healthcare program in which certain employees are eligible to participate. The costs of the healthcare program are funded on a self-insured and insured-premium basis. Net periodic benefit costs for the company’s pension plans include the following components:
  Three Months Ended  Six Months Ended  
  June 28, June 30, June 28, June 30, 
(In millions) 2008 2007 2008 2007 
          
Service Cost $3.4 $4.1 $7.7 $8.2 
Interest Cost on Benefit Obligation  14.3  14.0  28.8  27.9 
Expected Return on Plan Assets  (15.9) (14.7) (31.7) (29.3)
Amortization of Net Loss  0.4  0.9  0.8  1.8 
Curtailment Gain  (18.5)   (18.5)  
Special Termination Benefits  0.2    0.2   
              
Net Periodic Benefit Cost (Income) $(16.1)$4.3 $(12.7)$8.6 

In April 2008, the company curtailed a defined benefit plan and, as a result, recorded a gain of $18.5 million.
  Three Months Ended 
  March 28, March 29, 
(In millions) 2009 2008 
      
Service Cost $2.5 $4.3 
Interest Cost on Benefit Obligation  12.0  14.5 
Expected Return on Plan Assets  (12.3) (15.8)
Amortization of Net Loss  0.3  0.4 
Amortization of Prior Service Benefit  0.1   
Special Termination Benefits  0.2   
        
Net Periodic Benefit Cost (Income) $2.8 $3.4 

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THERMO FISHER SCIENTIFIC INC.

8.Defined Benefit Pension Plans (continued)

Net periodic benefit costs for the company’s other postretirement benefit plans include the following components:

  Three Months Ended Six Months Ended 
  June 28, June 30, June 28, June 30, 
(In millions) 2008 2007 2008 2007 
          
Service Cost $0.2 $0.2 $0.4 $0.4 
Interest Cost on Benefit Obligation  0.5  0.4  1.0  0.8 
              
Net Periodic Benefit Cost $0.7 $0.6 $1.4 $1.2 
  Three Months Ended 
  March 28, March 29, 
(In millions) 2009 2008 
      
Service Cost $0.1 $0.2 
Interest Cost on Benefit Obligation  0.4  0.5 
        
Net Periodic Benefit Cost $0.5 $0.7 

9.Fair Value Measurements

In September 2006, the FASB issued SFAS No. 157, “Fair Value Measurements.” SFAS No. 157 defines fair value, establishes a framework for measuring fair value and expands disclosures about fair value measurements. This statement applies to other accounting pronouncements that require or permit fair value measurements. This statement does not require any new fair value measurements.

On January 1, 2008, the company adopted SFAS No. 157 as it pertains to financial assets and liabilities. In accordance with the provisions of FASB Staff Position 157-2, the company elected to defer the adoption of SFAS No. 157 relating to the fair value of non-financial assets and liabilities. The company is currently evaluating the impact, if any, of applying SFAS No. 157 to its non-financial assets and liabilities.

The company uses the market approach technique to value its financial instruments and there were no changes in valuation techniques during the six monthsquarter ended JuneMarch 28, 2008.2009. The company’s financial assets and liabilities carried at fair value are primarily comprised of investments in money market funds, mutual funds holding publicly traded securities, derivative contracts used to hedge the company’s currency risk an interest rate swap, and other investments in unit trusts and insurance contracts held as assets to satisfy outstanding retirement liabilities.

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THERMO FISHER SCIENTIFIC INC.

9.Fair Value Measurements (continued)

SFAS No. 157 requires that assets and liabilities carried at fair value be classified and disclosed in one of the following three categories:

Level 1: Quoted market prices in active markets for identical assets or liabilities that the company has the ability to access.

Level 2: Observable market based inputs or unobservable inputs that are corroborated by market data such as quoted prices, interest rates and yield curves.

Level 3: Inputs are unobservable data points that are not corroborated by market data.

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THERMO FISHER SCIENTIFIC INC.

9.Fair Value Measurements (continued)

The following table presents information about the company’s financial assets and liabilities measured at fair value on a recurring basis as of JuneMarch 28, 2008:2009:

Description June 28, 2008 
Quoted Prices in
Active Markets
(Level 1)
 
Significant Other
Observable
Inputs
(Level 2)
 
Significant
Unobservable
Inputs
(Level 3)
 
          
Assets         
  Cash equivalents
 $529.8 $529.8 $ $ 
  Investments in mutual funds, unit trusts and other similar instruments
  33.7  33.7     
  Cash surrender value of life insurance
  18.2    18.2   
  Auction rate securities
  7.9    7.9   
  Interest rate swap
  1.0    1.0   
  Marketable equity securities
  2.7  2.7     
  Derivatives
  0.9   —  0.9   
              
  Total Assets
 $594.2 $566.2 $28.0 $ 
              
Liabilities             
  Derivatives
 $0.7 $ $0.7 $ 
              
  Total Liabilities
 $0.7 $ $0.7 $ 
(In millions) March 28, 2009 
Quoted Prices in
Active Markets
(Level 1)
 
Significant Other
Observable
Inputs
(Level 2)
 
Significant
Unobservable
Inputs
(Level 3)
 
          
Assets         
      Cash equivalents $895.1 $895.1 $ $ 
      Investments in mutual funds, unit trusts and other similar instruments  24.5  24.5     
      Cash surrender value of life insurance  20.0    20.0   
      Auction rate securities  6.3      6.3 
      Marketable equity securities  0.5  0.5     
      Forward currency-exchange contracts  1.6    1.6   
              
            Total Assets $948.0 $920.1 $21.6 $6.3 
              
Liabilities             
      Forward currency-exchange contracts $1.1 $ $1.1 $ 
              
            Total Liabilities $1.1 $ $1.1 $ 


 
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THERMO FISHER SCIENTIFIC INC.

9.Fair Value Measurements (continued)

The following table presents information about the company’s financial assets and liabilities measured at fair value on a recurring basis as of December 31, 2008:
(In millions) 
 December 31,
2008
 
Quoted Prices in
Active Markets
(Level 1)
 
 Significant
Other
Observable
Inputs
(Level 2)
 
 Significant
Unobservable
Inputs
(Level 3)
 
          
Assets         
      Cash equivalents $560.8 $560.8 $ $ 
      Investments in mutual funds, unit trusts and other similar instruments  24.0  24.0     
      Cash surrender value of life insurance  21.3    21.3   
Auction rate securities
  5.7      5.7 
Marketable equity securities
  1.0  1.0     
      Forward currency-exchange contracts  3.3    3.3   
              
Total Assets
 $616.1 $585.8 $24.6 $5.7 
              
Liabilities             
      Forward currency-exchange contracts $4.0 $ $4.0 $ 
              
Total Liabilities
 $4.0 $ $4.0 $ 

The following table is a rollforward of the fair value, as determined by Level 3 inputs, of our auction rate securities, which are included in short-term investments on the consolidated balance sheet.

(In millions) Total 
    
Balance at December 31, 2008 $5.7 
Total unrealized gains included in other comprehensive income  0.6 
     
Balance at March 28, 2009 $6.3 

The company determines the fair value of the auction rate securities by obtaining indications of value from broker/dealers.

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THERMO FISHER SCIENTIFIC INC.

10.Warranty Obligations

Product warranties are included in other accrued expenses in the accompanying balance sheet. The changes in the carrying amount of warranty obligations are as follows:

  Six Months Ended 
  June 28, June 30, 
(In millions) 2008 2007 
      
Beginning Balance $50.6 $45.5 
Provision charged to income  19.2  21.8 
Usage  (19.5) (18.8)
Acquisitions/divestitures    0.6 
Adjustments to previously provided warranties, net  (0.9)  
Other, net (a)  1.8  1.1 
        
Ending Balance $51.2 $50.2 
  Three Months Ended 
  March 28, March 29, 
(In millions) 2009 2008 
      
Beginning Balance $44.1 $50.6 
Provision charged to income  7.5  10.7 
Usage  (10.4) (9.9)
Acquisitions/divestitures    (0.3)
Adjustments to previously provided warranties, net  0.5  (1.1)
Other, net (a)  (1.0) 2.3 
        
Ending Balance $40.7 $52.3 

(a)Primarily represents the effects of currency translation.

11.Restructuring and Other Costs, Net

Restructuring costs in the first sixthree months of 20082009 in both segments primarily included charges for actions in response to the downturn in the economy and reduced revenues in several businesses, as well as abandoned facility costs at businesses that have been or are being consolidated. As of May 1, 2009, the company has identified restructuring plans to consolidate facilities and streamline operations, offset by a gain from curtailing a pension plan.actions that will result in additional charges of approximately $22 million, primarily in the remainder of 2009.

During the secondfirst quarter of 2008,2009, the company recorded net restructuring and other costs (income) by segment as follows:

(In millions) 
Analytical
Technologies
 
Laboratory
Products and
Services
 Corporate Total 
          
Cost of Revenues $0.2 $ $ $0.2 
Restructuring and Other Costs, Net  11.8  0.6  (17.8) (5.4)
              
  $12.0 $0.6 $(17.8)$(5.2)

During the first six months of 2008, the company recorded net restructuring and other costs (income) by segment as follows:

(In millions) 
Analytical
Technologies
 
Laboratory
Products and
Services
 Corporate Total 
          
Cost of Revenues $0.5 $0.3 $ $0.8 
Restructuring and Other Costs, Net  14.1  1.4  (16.0) (0.5)
              
  $14.6 $1.7 $(16.0)$0.3 

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THERMO FISHER SCIENTIFIC INC.

11.Restructuring and Other Costs, Net (continued)
(In millions) 
Analytical
Technologies
 
Laboratory
Products and
Services
 Corporate Total 
          
Restructuring and Other Costs, Net $8.3 $4.4 $0.9 $13.6 

The components of net restructuring and other costs by segment are as follows:

Analytical Technologies

The Analytical Technologies segment recorded $12.0$8.3 million of net restructuring and other charges in the secondfirst quarter of 2008. The segment recorded charges to cost of revenues of $0.2 million, primarily for accelerated depreciation at facilities closing due to real estate consolidation, and $11.8 million of other costs, net.2009. These other costs consisted of $3.6$8.4 million of cash costs, principally associated with headcount reductions and facility consolidations and streamliningin an effort to streamline operations, including $1.8$6.3 million of severance for 93approximately 230 employees primarily in manufacturing research and development functions; $0.4 million of abandoned-facility costs, primarily for charges associated with facilities vacated in prior periods for costs that could not be recorded until incurred; and $1.4 million of other cash costs, primarily retention, relocation and moving expenses associated with facility consolidations. The segment also recorded a loss of $5.0 million associated with a litigation-related matter assumed as part of the merger with Fisher in 2006 and a loss of $3.0 million on the sale of a business, as well as non-cash costs of $0.2 million for asset write downs at abandoned facilities.

In the first quarter of 2008, this segment recorded $2.6 million of net restructuring and other charges. The segment recorded charges to cost of revenues of $0.3 million, primarily for accelerated depreciation at facilities closing due to real estate consolidation, and $2.3 million of other costs, net. These other costs consisted of $3.1 million of cash costs, principally associated with facility consolidations and streamlining our operations, including $1.2 million of severance for 51 employees primarily in manufacturing, sales and service functions; $1.2 million of abandoned-facility costs, primarily for charges associated with facilities vacated in prior periods for costs that could not be recorded until incurred;costs; and $0.7$0.9 million of other cash costs, primarily contract termination costsrelocation and relocationmoving expenses associated with facility consolidations. These costs were partially offset by $0.7 million of gains associated with the sale of businesses prior to 2008.

The principal restructuring actions in 2008 in the Analytical Technologies segment include consolidating bioprocess production operations into a new facility being built at a current site in Utah,consolidations as well as continuing the actions initiated prior to 2008 to cease manufacturing activities at plants in New Mexico, California and Denmark and transfer their operations to other sites.costs associated with restructuring actions. The segment also recorded non-cash income of $0.1 million, including a gain on sale of a small business unit of $0.9 million, largely offset by other restructuring-related charges.

Laboratory Products and Services

The Laboratory Products and Services segment recorded $0.6$4.4 million of net restructuring and other charges in the secondfirst quarter of 2008.2009. The segment recorded $2.4$4.5 million of cash costs, which consisted of $2.0$3.6 million of severance for 176approximately 330 employees primarily in manufacturing; $0.2manufacturing and administrative functions; $0.3 million of abandoned-facility costs; and $0.2 million of other cash costs. These cash costs were partially offset by a $1.8 million gain on the sale of real estate in Holland.

In the first quarter of 2008, this segment recorded $1.1 million of net restructuring and other charges. The segment recorded charges to cost of revenues of $0.3 million for the sale of inventories revalued at the date of acquisition; and $0.8 million of other costs, net, all of which were cash costs. These other costs consisted of $0.3 million of severance for 11 employees across all functions; $0.2 million of abandoned-facility costs; and $0.3$0.6 million of other cash costs, primarily for moving and relocation expenses.

The principal restructuring actions in 2008 in the Laboratory Products and Services segment include moving the manufacture of certain laboratory consumables products from existingexpenses associated with abandoned facilities in California and New York to a new facility in Mexico, as well as continuing the move of a manufacturing site in France to Germany, which is a phased plan through mid-2009.other costs associated with restructuring actions.

 
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THERMO FISHER SCIENTIFIC INC.

11.Restructuring and Other Costs, Net (continued)

Corporate

In April 2008, the company curtailed a defined benefit plan and, as a result, recorded a gain of $18.5 million.

The company recorded $0.7$0.9 million ofin restructuring and other chargesincome at its corporate office in the second quarter of 2008, most of which were cash costs, primarily for severance.

In the first quarter of 2008, the company recorded $1.8 million of restructuring and other charges at its corporate office,2009, all of which were cash costs,charges, primarily for abandoned facility costs and, to a lesser extent, severance.

General

The following table summarizes the cash components of the company’s restructuring plans. The noncash components and other amounts reported as restructuring and other costs, (income), net, in the accompanying 2008 statement of income for the first quarter of 2009 have been summarized in the notes to the table. Accrued restructuring costs are included in other accrued expenses in the accompanying balance sheet.

 
 
(In millions)
 Severance 
Employee
Retention (a)
 
Abandonment
of Excess
Facilities
 Other Total 
            
Pre-2007 Restructuring Plans           
 Balance at December 31, 2007
 $1.8 $ $3.6 $0.6 $6.0 
 Costs incurred in 2008 (b)
  0.6    0.7  0.1  1.4 
 Reserves reversed
  (0.1)       (0.1)
 Payments
  (1.1)   (1.4) (0.1) (2.6)
 Currency translation
  0.1    0.2    0.3 
                 
 Balance at June 28, 2008
 $1.3 $ $3.1 $0.6 $5.0 
                 
2007 Restructuring Plans                
 Balance at December 31, 2007
 $9.2 $1.5 $1.1 $1.6 $13.4 
 Costs incurred in 2008 (b)
  2.4  0.9  1.3  0.9  5.5 
 Reserves reversed
  (0.4) (0.4) (0.1)   (0.9)
 Payments
  (4.8) (1.3) (1.0) (1.5) (8.6)
 Currency translation
  0.5  0.1  0.1  0.1  0.8 
                 
 Balance at June 28, 2008
 $6.9 $0.8 $1.4 $1.1 $10.2 
                 
2008 Restructuring Plans                
 Costs incurred in 2008 (b)
 $4.8 $0.1 $0.2 $1.1 $6.2 
 Payments
  (2.0)   (0.2) (1.0) (3.2)
                 
 Balance at June 28, 2008
 $2.8 $0.1 $ $0.1 $3.0 
 
 
(In millions)
 Severance 
Employee
Retention (a)
 
Abandonment
of Excess
Facilities
 Other Total 
            
Pre-2008 Restructuring Plans           
 Balance at December 31, 2008
 $5.4 $0.8 $4.4 $0.7 $11.3 
 Costs incurred in 2009 (b)
    0.1  1.0  0.3  1.4 
 Reserves reversed
    (0.1)     (0.1)
 Payments
  (0.7)   (1.1) (0.4) (2.2)
 Currency translation
  (0.3)   (0.1)   (0.4)
                 
 Balance at March 28, 2009
 $4.4 $0.8 $4.2 $0.6 $10.0 
                 
2008 Restructuring Plans                
 Balance at December 31, 2008
 $7.0 $0.4 $1.8 $0.3 $9.5 
 Costs incurred in 2009 (b)
  1.8    0.3  0.3  2.4 
 Payments
  (3.0)   (0.3) (0.6) (3.9)
 Currency translation
  (0.2)       (0.2)
                 
 Balance at March 28, 2009
 $5.6 $0.4 $1.8 $ $7.8 
                 
2009 Restructuring Plans                
 Costs incurred in 2009 (b)
 $8.4 $ $0.8 $0.8 $10.0 
 Payments
  (2.8)   (0.2) (0.8) (3.8)
                 
 Balance at March 28, 2009
 $5.6 $ $0.6 $ $6.2 

(a)Employee-retention costs are accrued ratably over the period through which employees must work to qualify for a payment.
(b)Excludes non-cash items, including an $18.5a $0.9 million gain on the curtailment of a pension plan in the U.S., a $5.0 million loss associated with a litigation-related matter assumed as part of the merger with Fisher in 2006, a $3.0 million loss related to the sale of a small business, a $1.8 million gain on the sale of real estate and $0.3 million oflargely offset by other non-cash income, net.restructuring-related charges.

The company expects to pay accrued restructuring costs as follows: severance, employee-retention obligations and other costs, primarily through 2009; and abandoned-facility payments, over lease terms expiring through 2013.2015.

 
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THERMO FISHER SCIENTIFIC INC.

12.Litigation and Related Contingencies

On September 3, 2004, Applera Corporation, MDS Inc. and Applied Biosystems/MDS Scientific Instruments filed a lawsuit against the company in U.S. federal court. These plaintiffs allege that the company’s mass spectrometer systems, including its triple quadrupole and certain of its ion trap systems, infringe a patent of the plaintiffs. The plaintiffs seek damages, including treble damages for alleged willful infringement, attorneys’ fees, prejudgment interest and injunctive relief. In the opinion of management, an unfavorable outcome of this matter could have a material adverse effect on the company’s financial position as well as its results of operations and cash flows.

On December 8, 2004 and February 23, 2005, the company asserted in two lawsuits against a combination of Applera Corporation, MDS Inc. and Applied Biosystems/MDS Scientific Instruments that one or more of these parties infringe two patents of the company.

There are various other lawsuits and claims pending against the company involving product liability, contract, commercial and other issues. In view of the company’s financial condition and the accruals established for related matters, management does not believe that the ultimate liability, if any, related to these matters will have a material adverse effect on the company’s financial condition, results of operations or cash flows.

The company establishes a liability that is an estimate of amounts needed to pay damages in the future for events that have already occurred. The accrued liabilities are based on management’s judgment as to the probability of losses and, where applicable, actuarially determined estimates. The reserve estimates are adjusted as additional information becomes known or payments are made.

For product liability, workers compensation and other personal injury matters, the company accrues the most likely amount or at least the minimum of the range of probable loss when a range of probable loss can be estimated, including estimated defense costs. The company records estimated amounts due from insurers as an asset. Although the company believes that the amounts reserved and estimated recoveries are probable and appropriate based on available information, including actuarial studies of loss estimates, the process of estimating losses and insurance recoveries involves a considerable degree of judgment by management and the ultimate amounts could vary materially. For example, there are pending lawsuits with certain of Fisher’sthe company’s insurers concerning which state’s laws should apply to the insurance policies and how such laws affect the policies. Should these actions resolve unfavorably, the estimated amount due from insurers of $69$82 million would require an adjustment that could be material to the company’s results of operations. Insurance contracts do not relieve the company of its primary obligation with respect to any losses incurred. The collectibility of amounts due from its insurers is subject to the solvency and willingness of the insurer to pay, as well as the legal sufficiency of the insurance claims. Management monitors the financial condition and ratings of its insurers on an ongoing basis.

The company is currently involved in various stages of investigation and remediation related to environmental matters, principally at businesses acquired in the merger with Fisher. The company cannot predict all potential costs related to environmental remediation matters and the possible impact on future operations given the uncertainties regarding the extent of the required cleanup, the complexity and interpretation of applicable laws and regulations, the varying costs of alternative cleanup methods and the extent of the company’s responsibility. Expenses for environmental remediation matters related to the costs of permit requirements and installing, operating and maintaining groundwater-treatment systems and other remedial activities related to historical environmental contamination at the company’s domestic and international facilities were not material in any period presented. The company’s liability for environmental matters associated with businesses acquired in the merger with Fisher was recorded at its fair value and as such, was discounted to its present value. The company records accruals for environmental remediation liabilities, based on current interpretations of environmental laws and regulations, when it is probable that a liability has been incurred and the amount of such liability can be reasonably estimated. The company calculates estimates based upon several factors, including reports prepared by environmental specialists and management’s knowledge of and experience with these environmental matters. The company includes in these estimates potential costs for investigation, remediation and operation and maintenance of cleanup sites.

 
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THERMO FISHER SCIENTIFIC INC.

12.Litigation and Related Contingencies (continued)

Management believes that its reserves for environmental matters are adequate for the remediation costs the company expects to incur. As a result, the company believes that the ultimate liability with respect to environmental remediation matters will not have a material adverse effect on the company’s financial position, results of operations or cash flows. However, the company may be subject to additional remedial or compliance costs due to future events, such as changes in existing laws and regulations, changes in agency direction or enforcement policies, developments in remediation technologies or changes in the conduct of the company’s operations, which could have a material adverse effect on the company’s financial position, results of operations or cash flows. Although these environmental remediation liabilities do not include third-party recoveries, the company may be able to bring indemnification claims against third parties for liabilities relating to certain sites.

13.Recent Accounting Pronouncements

In February 2007,September 2006, the FASB issued SFAS No. 159, “The Fair157, “Fair Value Option for Financial Assets and Financial Liabilities - including an Amendment of FASB Statement No. 115.Measurements.” SFAS No. 159 permits entities157 defines fair value, establishes a framework for measuring fair value and expands disclosures about fair value measurements. This statement applies to measure eligible financial assets, financial liabilities and certain other accounting pronouncements that require or permit fair value measurements. This statement does not require any new fair value measurements. SFAS No. 157 was effective for the company’s monetary assets and liabilities at fair value on an instrument-by-instrument basis. The company adopted SFAS No. 159in the first quarter of 2008 and for non-financial assets and liabilities beginning January 1, 2008. Adoption2009. There was no material effect from adoption of the standard did not result in any change in the valuation of the company’s assets and liabilities.

In December 2007, the FASB issued SFAS No. 141R, “Business Combinations.” SFAS No. 141R does the following: requires the acquiring entity in a business combination to recognize all (and only) the assets acquired and liabilities assumed in the transaction; establishes the acquisition-date fair value as the measurement objective for all assets acquired and liabilities assumed; and requires the acquirer to disclose certain information to enable users to understand the nature and financial effect of the business combination. The statement requires that cash outflows such as transaction costs and post-acquisition restructuring be charged to expense instead of capitalized as a cost of the acquisition. Contingent purchase price will be recorded at its initial fair value and then re-measured as time passes through adjustments to net income. SFAS No. 141R is effective for the company in 2009. The company is currently evaluating the impact of adoption.this standard.

In December 2007, the FASB issued SFAS No. 160, “Noncontrolling Interests in Consolidated Financial Statements.” SFAS No. 160 will changechanged the accounting for minority interests, which will beare reclassified as noncontrolling interests and classified as a component of equity. SFAS No. 160 iswas effective for the company in 2009. The company does not expect a materialbeginning January 1, 2009, and there was no effect from adoption of this standard.

In March 2008, the FASB issued SFAS No. 161, “Disclosures about Derivative Instruments and Hedging Activities.” SFAS No. 161 requires disclosures of how and why an entity uses derivative instruments; how derivative instruments and related hedged items are accounted for; and how derivative instruments and related hedged items affect an entity’s financial position, financial performance and cash flows. SFAS No. 161 iswas effective for the company in 2009. The company does not expect abeginning January 1, 2009, and there was no material effect from adoption of this standard.

In May 2008,April 2009, the FASB issued FSP APB No. 14-1, “AccountingFAS 115-2 and FAS 124-2, “Recognition and Presentation of Other-Than-Temporary Impairments.” This FSP amends the other-than-temporary impairment guidance for Convertible Debt Instruments That May Be Settled in Cash upon Conversion (Including Partial Cash Settlement).” FSP APB No. 14-1 requirescertain debt securities and will require the issuersinvestor to assess the likelihood of certain convertibleselling the debt instrumentssecurity prior to recovery of its cost basis. If an investor is able to meet the criteria to assert that may be settled in cash (or other assets) on conversionit does not intend to separately account forsell the liability (debt)debt security and equity (conversion option) components in a manner that reflects the issuer's nonconvertible debt borrowing rate when interest cost is recognized in subsequent periods. FSP ABP No. 14-1 is effective for the company beginning in 2009. Prior periods will be restated as if the new rule had been in effect in prior periods. Early adoption ismore likely than not permitted. While the company’s cash payments for interest will not be affected,required to sell the debt security before its anticipated recovery, impairment charges related to credit losses would be recognized in earnings whereas impairment charges related to non-credit losses would be reflected in other comprehensive income. The company elected early adoption of FSP APB No. 14-1 will increasethis pronouncement in the company’s reported interest expense in a manner that reflects interest ratesfirst quarter of similar non-convertible debt. The company expects that annual interest expense will increase by approximately $23 million, which will unfavorably2009 although the rule did not materially affect earnings per share by approximately $.03 per year following adoption of the rule.its financial statements.

In June 2008,April 2009, the FASB issued FSP EITF 03-6-1, “Determining Whether Instruments Granted in Share-Based Payment Transactions Are Participating Securities.No. FAS 107-1 and APB 28-1, “Interim Disclosures about Fair Value of Financial Instruments.This FSP EITF 03-6-1 clarifies that share-based payment awards that entitle their holdersrequires the fair value disclosures required by FAS 107 regarding the fair value of financial instruments to receive nonforfeitable dividends before vesting should be considered participating securities. As participating securities, these instruments should be included in the calculation of basic earnings per share.interim financial statements. This FSP EITF 03-6-1 is effective for the company in 2009. The company does not expect a material effectinterim periods ending after June 15, 2009, and requires additional disclosure from adoption of this rule.that required currently.

 
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THERMO FISHER SCIENTIFIC INC.


Item 2.Management’s Discussion and Analysis of Financial Condition and Results of Operations

Forward-looking statements, within the meaning of Section 21E of the Securities Exchange Act of 1934, are made throughout this Management’s Discussion and Analysis of Financial Condition and Results of Operations. Any statements contained herein that are not statements of historical fact may be deemed to be forward-looking statements. Without limiting the foregoing, the words “believes,” “anticipates,” “plans,” “expects,” “seeks,” “estimates” and similar expressions are intended to identify forward-looking statements. While the company may elect to update forward-looking statements in the future, it specifically disclaims any obligation to do so, even if the company’s estimates change, and readers should not rely on those forward-looking statements as representing the company’s views as of any date subsequent to the date of the filing of this Quarterly Report.

A number of important factors could cause the results of the company to differ materially from those indicated by such forward-looking statements, including those detailed under the heading “Risk Factors” in Part II, Item 1A of this report on Form 10-Q.

Overview of Results of Operations and Liquidity

The company develops, manufactures and sells a broad range of products that are sold worldwide. The company expands the product lines and services it offers by developing and commercializing its own technologies and by making strategic acquisitions of complementary businesses. The company’s continuing operations fall into two business segments: Analytical Technologies and Laboratory Products and Services. During the first quarter of 2008,2009, the company transferred management responsibility and related financial reporting and monitoring for severala small product linesline between segments. The company has historically moved a product line between segments when a shift in strategic focus of either the product line or a segment more closely aligns the product line with a segment different than that in which it had previously been reported. Prior period segment information has been reclassified to reflect these transfers.this transfer.

Revenues
 Three Months Ended Six Months Ended  Three Months Ended 
(Dollars in millions)  June 28, 2008 June 30, 2007   June 28, 2008  June 30, 2007  March 28, 2009 March 29, 2008 
                          
Revenues         
Analytical Technologies $1,160.6 42.8% $1,020.4 42.8% $2,248.0 42.7% $2,008.7 42.5%  $938.8 41.6% $1,086.8 42.6% 
Laboratory Products and Services  1,656.4 61.1%  1,449.7 60.8%  3,224.8 61.3%  2,883.2 61.0%   1,423.0 63.1%  1,568.8 61.4% 
Eliminations  (107.4)(3.9)%  (84.2)(3.6)%  (209.2)(4.0)%  (167.8)(3.5)%   (106.7)(4.7)%  (101.6)(4.0)% 
                                
 $2,709.6 100% $2,385.9 100% $5,263.6 100% $4,724.1 100%  $2,255.1 100% $2,554.0 100% 

Sales in the secondfirst quarter of 20082009 were $2.71$2.26 billion, an increasea decrease of $324$299 million from the secondfirst quarter of 2007.2008. Aside from the effects of acquisitions, divestitures and currency translation and acquisitions, net of divestitures (discussed in total and by segment below), revenues increased over 2007decreased from 2008 revenues by $183$182 million (7%) due to higherlower revenues at existing businesses as a result of increaseddecreased demand, discussed below, and,offset in part by price increases. Sales of equipment were particularly affected as the company believes customers reduced purchases due to a lesser extent, price increases.the global market downturn. Sales of consumables, while lower, were not as significantly affected by the severe economic conditions.

In the first quarter of 2009, the company’s operating income and operating income margin were $190 million and 8.4%, respectively, compared with $290 million and 11.4%, respectively, in 2008. (Operating income margin is operating income divided by revenues.) The company’s strategy isdecrease in operating income was due to augment internal growthlower profitability at existing businesses with complementary acquisitions such as those completedresulting from decreased revenues offset in 2008part by price increases and 2007. The principal acquisitions included La-Pha-Pack,productivity improvements including global sourcing and lower operating costs following restructuring actions. In addition, restructuring and other costs increased $8 million in 2009. These decreases in operating income were offset in part by a manufacturer and provider of chromatography consumables and related accessories$6 million decrease in December 2007; Priority Solutions International, a third-party provider to the pharmaceutical and healthcare industriesamortization expense in October 2007; NanoDrop Technologies, Inc., a supplier of UV-Vis spectrophotometry and fluorescence scientific instruments in October 2007 and Qualigens Fine Chemicals, a chemical manufacturer and supplier in September 2007.2009.

 
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THERMO FISHER SCIENTIFIC INC.

Overview of Results of Operations and Liquidity (continued)

InThe company’s effective tax rates were 10.9% and 15.5% in the secondfirst quarter of 2009 and 2008, respectively. The decrease in the company’s operating income and operating income margin were $330 million and 12.2%, respectively, compared with $243 million and 10.2%, respectively, in 2007. (Operating income margin is operating income divided by revenues.) The increase in operating incomeeffective tax rate was primarily due to reduced earnings in higher profitability at existing businesses resulting from incremental revenues including price increases, merger integration savings and productivity improvements including material sourcing and lower operating costs following restructuring actions. The increase also resulted from $14 million of lower restructuring and other costs in 2008, principally due to a gain in 2008 from the curtailment of a pension plan in the U.S. and $11 million of lower merger-related cost of revenues charges. These increases weretax jurisdictions, offset in part by a $10 million increaserate increases in amortization expense as a result of acquisition-related intangible assets from 2007 and 2008 acquisitions.

The company’s effective tax rate was 19.9% and 15.5% in the second quarter of 2008 and 2007, respectively.certain regions. The tax provision in the secondfirst quarter of 20082009 was unfavorably affected by an increase$0.7 million or 0.4 percentage points resulting from the impact on deferred tax balances of newly enacted tax rates in income in higher taxseveral jurisdictions. The company currently expects its tax rate for the full year to be approximately 19%10% - 20%12%. The tax provision in the first quarter of 2008 was favorably affected by $9.6 million or 3.5 percentage points resulting from the impact on deferred tax balances of enacted reductions in tax rates in Switzerland.

Income from continuing operations increaseddecreased to $246$149 million in the secondfirst quarter of 2008,2009, from $188$230 million in the secondfirst quarter of 2007,2008, primarily due to the items discussed above that increaseddecreased operating income, in 2008, offset in part by the highera lower tax rate in 2008.rate.

During the first sixthree months of 2008,2009, the company’s cash flow from operations totaled $590$359 million, compared with $554$243 million for the first sixthree months of 2007.2008. The increase resulted primarily from improved cash flow at existing businesses offset in part by higher payments for income taxes and an increasedecreased investment in working capital items.items, particularly accounts receivable and, to a lesser extent, other current assets, primarily due to the cash receipt of a tax refund.

As of JuneMarch 28, 2008,2009, the company’s outstanding debt totaled $2.19$2.03 billion, of which approximately 93%$0.9 billion is dueconvertible debt, at conversion prices ranging from $23.73 to $40.20 per share. As of May 1, 2009, $295 million of the convertible debt was currently convertible. Although the company’s experience is that convertible debentures are not normally converted by investors until close to their maturity date, it is possible, particularly in 2010the current uncertain financial climate, that debentures could be converted prior to their maturity date if, for example, a holder perceives the market for the debentures to be weaker than the market for the common stock. Upon an investor’s election to convert, the company is required to pay the original principal portion of these debentures in cash, and thereafter. the balance of the conversion value in either cash or stock, at the company's election. Should holders elect to convert, the company intends to draw on its revolving credit facility to fund substantially all of these principal payments. The facility is an unsecured revolving credit agreement expiring in 2012 with available capacity of $951 million at March 28, 2009.
The company expectsbelieves that its existing cash and short-term investments of $1.02$1.57 billion as of JuneMarch 28, 2008,2009, and the company’s future cash flow from operations together with available unsecured borrowing capacity of up to $942 million under its existing 5-year revolving credit agreement, are sufficient to meet the working capitalcash requirements of its existing businesses for the foreseeable future, including at least the next 24 months.

Critical Accounting Policies

Preparation of financial statements requires management to make estimates and assumptions that affect the reported amounts of assets, liabilities, revenues and expenses. Management believes the most complex and sensitive judgments, because of their significance to the consolidated financial statements, result primarily from the need to make estimates about the effects of matters that are inherently uncertain. Management’s Discussion and Analysis and Note 1 to the Consolidated Financial Statements in the company’s Form 10-K for 2007,2008, describe the significant accounting estimates and policies used in preparation of the consolidated financial statements. Actual results in these areas could differ from management’s estimates. There have been no significant changes in the company’s critical accounting policies during the first sixthree months of 2008.2009.

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THERMO FISHER SCIENTIFIC INC.

Results of Operations

SecondFirst Quarter 20082009 Compared With SecondFirst Quarter 20072008

Continuing Operations

Sales in the secondfirst quarter of 20082009 were $2.71$2.26 billion, an increasea decrease of $324$299 million from the secondfirst quarter of 2007.2008. The favorableunfavorable effects of currency translation resulted in an increasea decrease in revenues of $90$133 million in 2008.2009. Sales increased $51$16 million due to acquisitions, net of divestitures. Aside from the effect of currency translation and acquisitions, net of divestitures, revenues increased $183decreased $182 million (7%) primarily due to increaseddecreased demand and,due to a lesser extent,economic uncertainty offset in part by price increases, as described by segment below. Growth was very strong in Asia, strongSales were down in North America and, modestto a lesser extent, in Europe.

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THERMO FISHER SCIENTIFIC INC.

Second Quarter 2008 Compared With Second Quarter 2007 (continued) Sales were modestly higher in Asia.

In the secondfirst quarter of 2008,2009, operating income and operating income margin were $330$190 million and 12.2%8.4%, respectively, compared with $243$290 million and 10.2%11.4%, respectively, in the secondfirst quarter of 2007.2008. The increasedecrease in operating income was due to higherlower profitability at existing businesses resulting from incrementaldecreased revenues includingoffset in part by price increases merger integration savings and productivity improvements including materialglobal sourcing and lower operating costs following restructuring actions. The increase also resulted from $14 million of lowerIn addition, restructuring and other costs increased $8 million in 2008, principally due to a gain2009. These decreases in 2008 from the curtailment of a pension plan in the U.S. and $11 million of lower merger-related cost of revenues charges. These increasesoperating income were offset in part by a $10$6 million increasedecrease in amortization expense as a result of acquisition-related intangible assets from 2007 and 2008 acquisitions.in 2009.

In the secondfirst quarter of 2008,2009, the company recorded restructuring and other income,costs, net, of $5$14 million. The company incurred $7$14 million of cash costs primarily for actions in response to the downturn in the economy and reduced revenues including severance to reduce headcount at several businesses and abandoned facility expenses at businesses that have been or are being consolidated and recorded a loss of $5 million associated with a litigation-related matter assumed as part of the merger with Fisher Scientific in 2006 and a loss of $3 million from the sale of a business. These losses were more than offset by an $18 million gain on the curtailment of a pension plan in the U.S. and a $2 million gain on the sale of real estate (Note 11).consolidated. In the secondfirst quarter of 2007,2008, the company recorded restructuring and other costs, net, of $19$6 million, including $11$0.6 million of charges to costcosts of revenues substantially all related to the sale of inventories revalued at the date of acquisition (principally Fisher).and accelerated depreciation on manufacturing assets to be abandoned due to facility consolidations. The company incurred $8$6 million of cash costs, primarily for severance and abandoned facilities and relocation expenses at businesses that have been consolidated, as well as merger-related costs.and recorded $0.7 million of gains associated with the sale of businesses prior to 2008.

As of May 1, 2009, the company has identified restructuring actions that will result in additional charges of approximately $22 million, primarily in the remainder of 2009. Annual cost savings associated with actions initiated in late 2008 and in the first quarter of 2009 are expected to total approximately $50 million, beginning primarily in the first and second quarters of 2009.

The company's revenues and profitability decreased in the first quarter of 2009 compared to the first quarter of 2008. The company believes the decreases are primarily due to the global economic downturn. Should the downturn continue indefinitely or worsen such that the company's projections of profitability for 2009 and future years decrease materially, impairment of goodwill and acquisition-related intangible assets could occur. These assets totaled $8.7 billion and $6.2 billion, respectively, at March 28, 2009.

Segment Results

The company’s management evaluates segment operating performance using operating income before certain charges to cost of revenues, principally associated with acquisition accounting; restructuring and other costs/income including costs arising from facility consolidations such as severance and abandoned lease expense and gains and losses from the sale of real estate and product lines; and amortization of acquisition-related intangible assets. The company uses these measures because they help management understand and evaluate the segments’ core operating results and facilitate comparison of performance for determining compensation (Note 3). Accordingly, the following segment data is reported on this basis.
  Three Months Ended 
   June 28,  June 30,   
(Dollars in millions)  2008  2007  Change 
        
Revenues       
 Analytical Technologies
 $1,160.6 $1,020.4 14% 
 Laboratory Products and Services
  1,656.4  1,449.7 14% 
 Eliminations
  (107.4) (84.2)  
          
 Consolidated Revenues
 $2,709.6 $2,385.9 14% 
          
Operating Income         
  Analytical Technologies
 $245.1 $201.9 21% 
      Laboratory Products and Services  231.5  202.7 14% 
          
 Subtotal Reportable Segments
  476.6  404.6 18% 
          
 Cost of Revenues Charges
  (0.2) (11.2)  
 Restructuring and Other Income (Costs), Net
  5.4  (8.3)  
 Amortization of Acquisition-related Intangible Assets
  (151.6) (142.1)  
          
 Consolidated Operating Income
 $330.2 $243.0 36% 

 
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THERMO FISHER SCIENTIFIC INC.

First Quarter 2009 Compared With First Quarter 2008 (continued)

  Three Months Ended 
  March 28, March 29,   
(Dollars in millions) 2009 2008 Change 
        
Revenues       
 Analytical Technologies
 $938.8 $1,086.8 (14)% 
 Laboratory Products and Services
  1,423.0  1,568.8 (9)% 
 Eliminations
  (106.7) (101.6)5% 
          
 Consolidated Revenues
 $2,255.1 $2,554.0 (12)% 
          
Operating Income         
   Analytical Technologies
 $173.5 $228.3 (24)% 
   Laboratory Products and Services
  175.5  218.8 (20)% 
          
 Subtotal Reportable Segments
  349.0  447.1 (22)% 
          
 Cost of Revenues Charges
    (0.6)  
 Restructuring and Other Costs, Net
  (13.6) (4.9)  
 Amortization of Acquisition-related Intangible Assets
  (145.3) (151.2)  
          
 Consolidated Operating Income
 $190.1 $290.4 (35)% 

Second Quarter 2008 Compared With Second Quarter 2007 (continued)Income from the company’s reportable segments decreased 22% to $349 million in the first quarter of 2009 due primarily to lower profitability at existing businesses, resulting from decreased revenues offset in part by price increases and productivity improvements including global sourcing and lower operating costs following restructuring actions.

   Analytical Technologies
  Three Months Ended 
   June 28,  June 30,   
(Dollars in millions)  2008  2007  Change 
        
Revenues $1,160.6 $1,020.4 14% 
          
Operating Income Margin  21.1%  19.8% 1.3 pts. 
  Three Months Ended 
  March 28, March 29,   
(Dollars in millions) 2009 2008 Change 
        
Revenues $938.8 $1,086.8    (14)% 
           
Operating Income Margin  18.5%  21.0% (2.5) pts. 

Sales in the Analytical Technologies segment increased $140decreased $148 million to $1.16 billion$939 million in the secondfirst quarter of 2008.2009. The favorableunfavorable effects of currency translation resulted in an increasea decrease of $50$62 million in 2008.2009. Sales increased $10$4 million due to 2008 acquisitions, net of divestitures. In addition to the changes in revenue resulting from currency translation and acquisitions, net of divestitures, revenues increased $80decreased $90 million (8%) primarily due to higherlower demand and, to a lesser extent,offset in part by increased prices. The higher demandDemand in industrial markets for environmental and process control instruments was particularly soft primarily due in part, to the introduction of new products. Growth was particularly strong in sales of scientific instruments and specialty diagnostics.global economic downturn.

Operating income margin was 21.1%18.5% in the secondfirst quarter of 20082009 and 19.8%21.0% in the secondfirst quarter of 2007.2008. The increasedecrease resulted from profit on incrementallower profitability from decreased revenues and, to a lesser extent,offset in part by price increases and productivity improvements, including materialglobal sourcing and lower operating costs following restructuring actions.

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THERMO FISHER SCIENTIFIC INC.

First Quarter 2009 Compared With First Quarter 2008 (continued)

   Laboratory Products and Services
  Three Months Ended 
   June 28,  June 30,   
(Dollars in millions)  2008  2007  Change 
        
Revenues $1,656.4 $1,449.7 14% 
          
Operating Income Margin  14.0%  14.0% — pts. 
  Three Months Ended 
   March 28,  March 29,   
(Dollars in millions)   2009  2008  Change 
        
Revenues $1,423.0 $1,568.8 (9)% 
          
Operating Income Margin  12.3%  13.9% (1.6) pts. 

Sales in the Laboratory Products and Services segment increased $207decreased $146 million to $1.66$1.42 billion in the secondfirst quarter of 2008.2009. Sales increased $47$13 million due to acquisitions, net of divestitures.2008 and 2009 acquisitions. The favorableunfavorable effects of currency translation resulted in an increasea decrease of $40$75 million in 2008.2009. In addition to the changes in revenue resulting from acquisitions divestitures and currency translation, revenues increased $120decreased $83 million (5%) primarily due to higherlower demand and to a lesser extent,decrease in sales of products purchased from a supplier discussed below, offset in part by increased prices. Sales made throughDemand for laboratory equipment was particularly weak as the segment’s research market and healthcare market channels and revenues fromcompany believes customers reduced purchases due to the company’s biopharma services were particularly strong.global economic downturn.

In July 2008, the company and a customersupplier of its healthcare market channel extended an existing agreement for two years through 2010. Under the revised agreement, the company’s revenues from the sale of products purchased from the supplier decreased $20 million in the first quarter of 2009 and the company expects its sales volume toof products purchased from the customersupplier to decrease from prior comparative periods by approximately $20$43 million over the remainder of 2008 and by approximately $60 million in 2009 for a total annualized decrease in revenues of approximately $80$63 million from present levels.2008.

Operating income margin was 14.0%12.3% in the second quartersfirst quarter of both 20082009 and 2007. Improvements driven13.9% in the first quarter of 2008. The decrease primarily resulted from lower profitability from decreased revenues, offset by profit on incremental revenue and, to a lesser extent,in part by price increases and productivity improvements, including materialglobal sourcing and lower operating costs following restructuring actions, were offset by material cost inflation, particularly affecting commodities such as raw resin, steel and plastics as well as higher fuel and freight costs.

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THERMO FISHER SCIENTIFIC INC.

Second Quarter 2008 Compared With Second Quarter 2007 (continued)actions.

Other Expense, Net

The company reported other expense, net, of $23 million and $21$18 million in the secondfirst quarter of 20082009 and 2007,2008, respectively (Note 4). Other expense, net, includes interest income, interest expense, equity in earnings of unconsolidated subsidiaries and other items, net. See discussion below concerningInterest income decreased to $5 million in the first quarter of 2009 from $10 million in the same period last year primarily due to lower interest rates on invested cash offset in part by higher cash balances. Interest expense decreased to $30 million in the first quarter of 2009 from $36 million in the first quarter of 2008 primarily as a recent accounting pronouncement that will increase non-cashresult of a reduction in debt and lower interest expenserates on variable rate debt. The company had $2 million in 2009.other income compared with $8 million in the first quarter of 2008. The higher income in 2008 resulted primarily from currency transaction net gains.

Provision for Income Taxes

The company’s effective tax rate was 19.9%rates were 10.9% and 15.5% in the secondfirst quarter of 2009 and 2008, and 2007, respectively. The decrease in the effective tax rate was primarily due to reduced earnings in higher tax jurisdictions, offset in part by rate increases in certain regions. The tax provision in the secondfirst quarter of 20082009 was unfavorably affected by an increase$0.7 million or 0.4 percentage points resulting from the impact on deferred tax balances of newly enacted tax rates in income in higher taxseveral jurisdictions. The company currently expects its tax rate for the full year to be approximately 19%10% - 20%12%. The tax provision in the first quarter of 2008 was favorably affected by $9.6 million or 3.5 percentage points resulting from the impact on deferred tax balances of enacted reductions in tax rates in Switzerland.

Contingent Liabilities

At the secondfirst quarter end 2008,2009, the company was contingently liable with respect to certain legal proceedings and related matters. As described under “Litigation and Related Contingencies” in Note 12, an unfavorable outcome in one or more of the matters described therein could materially affect the company’s financial position as well as its results of operations and cash flows.

24

THERMO FISHER SCIENTIFIC INC.

First Quarter 2009 Compared With First Quarter 2008 (continued)

Recent Accounting Pronouncements

In September 2006, the FASB issued SFAS No. 157, “Fair Value Measurements.” SFAS No. 157 defines fair value, establishes a framework for measuring fair value and expands disclosures about fair value measurements. This statement applies to other accounting pronouncements that require or permit fair value measurements. This statement does not require any new fair value measurements. SFAS No. 157 was effective for the company’s monetary assets and liabilities in the first quarter of 2008 and for non-financial assets and liabilities in 2009 (Note 9). The company is currently evaluating the potential impact on its methodologies for determining fair value and on its disclosures concerning nonmonetary assets and liabilities of adopting SFAS No. 157.

In February 2007, the FASB issued SFAS No. 159, “The Fair Value Option for Financial Assets and Financial Liabilities - including an Amendment of FASB Statement No. 115.” SFAS No. 159 permits entities to measure eligible financial assets, financial liabilities and certain other assets and liabilities at fair value on an instrument-by-instrument basis. The company adopted SFAS No. 159 beginning January 1, 2008. Adoption2009. There was no material effect from adoption of the standard did not result in any change in the valuation of the company’s assets and liabilities.this standard.

In December 2007, the FASB issued SFAS No. 141R, “Business Combinations.” SFAS No. 141R does the following: requires the acquiring entity in a business combination to recognize all (and only) the assets acquired and liabilities assumed in the transaction; establishes the acquisition-date fair value as the measurement objective for all assets acquired and liabilities assumed; and requires the acquirer to disclose certain information to enable users to understand the nature and financial effect of the business combination. The statement requires that cash outflows such as transaction costs and post-acquisition restructuring be charged to expense instead of capitalized as a cost of the acquisition. Contingent purchase price will be recorded at its initial fair value and then re-measured as time passes through adjustments to net income. SFAS No. 141R iswas effective for the company, inon a prospective basis, beginning January 1, 2009. The company is currently evaluatingThere was no impact upon adoption of the impact of adoption.standard; however, this statement may materially affect the accounting for any future business combinations.

In December 2007, the FASB issued SFAS No. 160, “Noncontrolling Interests in Consolidated Financial Statements.” SFAS No. 160 will changechanged the accounting for minority interests, which will beare reclassified as noncontrolling interests and classified as a component of equity. SFAS No. 160 iswas effective for the company in 2009. The company does not expect a materialbeginning January 1, 2009, and there was no effect from adoption of this standard.

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THERMO FISHER SCIENTIFIC INC.

Second Quarter 2008 Compared With Second Quarter 2007 (continued)

In March 2008, the FASB issued SFAS No. 161, “Disclosures about Derivative Instruments and Hedging Activities.” SFAS No. 161 requires disclosures of how and why an entity uses derivative instruments; how derivative instruments and related hedged items are accounted for; and how derivative instruments and related hedged items affect an entity’s financial position, financial performance and cash flows. SFAS No. 161 iswas effective for the company in 2009. The company does not expect abeginning January 1, 2009, and there was no material effect from adoption of this standard.

In May 2008, the FASB issued FSP APB No. 14-1, “Accounting for Convertible Debt Instruments That May Be Settled in Cash upon Conversion (Including Partial Cash Settlement).” FSP APB No. 14-1 requires the issuers of certain convertible debt instruments that may be settled in cash (or other assets) on conversion to separately account for the liability (debt) and equity (conversion option) components in a manner that reflects the issuer's nonconvertible debt borrowing rate when interest cost is recognized in subsequent periods. FSP ABP No. 14-1 iswas effective for the company beginning inJanuary 1, 2009. PriorThe rule required restatement of prior periods will be restated as if the new rule had been in effect in prior periods. Early adoption is not permitted. While theto conform to current accounting. The company’s cash payments for interest willhave not bebeen affected, but the adoption of FSP APB No. 14-1 will increasehas increased the company’s reported interest expense in a manner that reflects interest rates of similar non-convertible debt. The company expects that annual interestInterest expense will increase by approximately $23 million, which will unfavorably affect earnings per share by approximately $.03 per year followingin the first quarter of 2008, as restated for adoption of this rule, increased $5 million over the rule.previously reported amount.

In June 2008, the FASB issued FSP EITF 03-6-1, “Determining Whether Instruments Granted in Share-Based Payment Transactions Are Participating Securities.” FSP EITF 03-6-1 clarifies that share-based payment awards that entitle their holders to receive nonforfeitable dividends before vesting should be considered participating securities. As participating securities, these instruments should be includedFSP EITF 03-6-1 was effective for the company beginning January 1, 2009. The rule required restatement of prior periods to conform to current accounting. Adoption had a nominal effect on the numerator and denominator in the calculation of basic2008 earnings per share. FSP EITF 03-6-1 is effective for the company in 2009. The company does not expect a material effect from adoption of this rule.

Discontinued Operations

During the second quarter of 2008, the company recorded the reversal of a reserve on a note receivable related to a business divested in 2003, resulting in an after-tax gain of $3 million. The note was collected in July 2008.

In April 2009, the second quarterFASB issued FSP No. FAS 115-2 and FAS 124-2, “Recognition and Presentation of 2007,Other-Than-Temporary Impairments.” This FSP amends the company recorded a non-cashother-than-temporary impairment chargeguidance for certain debt securities and will require the investor to assess the likelihood of $27 million on a business held for sale. The loss primarily representedselling the carrying valuedebt security prior to recovery of the business in excess of the estimated disposal value. During the second quarter of 2007, the company received additional proceeds relating to a sale of a business divested in 2000 and recorded an after-tax gain of $3 million.its cost

First Six Months 2008 Compared With First Six Months 2007

Continuing Operations

Sales in the first six months of 2008 were $5.26 billion, an increase of $540 million from the first six months of 2007. The favorable effects of currency translation resulted in an increase in revenues of $176 million in 2008. Sales increased $92 million due to acquisitions, net of divestitures. Aside from the effect of currency translation and acquisitions, net of divestitures, revenues increased $272 million primarily due to increased demand and, to a lesser extent, price increases, as described by segment below. Growth was very strong in Asia, strong in North America and modest in Europe.

In the first six months of 2008, operating income and operating income margin were $621 million and 11.8%, respectively, compared with $435 million and 9.2%, respectively, in the first six months of 2007. The increase in operating income was due to higher profitability at existing businesses resulting from incremental revenues including price increases, merger integration savings and productivity improvements including material sourcing and lower operating costs following restructuring actions. The increase also resulted from $16 million of lower restructuring and other costs in 2008, principally due to a curtailment gain in 2008 associated with a pension plan in the U.S. and from $47 million of lower merger-related cost of revenues charges. These increases were offset in part by a $21 million increase in amortization expense as a result of acquisition-related intangible assets from 2007 and 2008 acquisitions.

 
25

 
THERMO FISHER SCIENTIFIC INC.

First Six Months 2008Quarter 2009 Compared With First Six Months 2007 (continued)
In the first six months ofQuarter 2008 the company recorded restructuring and other costs, net, of $0.3 million, including $0.8 million of charges to cost of revenues, related to the sale of inventories revalued at the date of acquisition and accelerated depreciation on manufacturing assets to be abandoned due to facility consolidations. The company incurred $12 million of cash costs primarily for severance and abandoned facility expenses at businesses that have been or are being consolidated and recorded a $5 million loss from a litigation-related matter assumed as part of the merger with Fisher in 2006 and a $3 million loss on the sale of a business. These charges were offset by an $18 million gain on the curtailment of a pension plan in the U.S. and a $2 million gain on the sale of real estate (Note 11). In the first six months of 2007, the company recorded restructuring and other costs, net, of $63 million, including $48 million of charges to cost of revenues, substantially all related to the sale of inventories revalued at the date of acquisition (principally Fisher). The company incurred $15 million of cash costs, primarily for severance, abandoned facilities and relocation expenses at businesses that have been consolidated as well as merger-related costs.

Segment Results
  Six Months Ended 
   June 28,  June 30,   
(Dollars in millions)  2008  2007  Change 
        
Revenues       
 Analytical Technologies
 $2,248.0 $2,008.7 12% 
 Laboratory Products and Services
  3,224.8  2,883.2 12% 
 Eliminations
  (209.2) (167.8)  
          
 Consolidated Revenues
 $5,263.6 $4,724.1 11% 
          
Operating Income         
  Analytical Technologies
 $473.8 $387.3 22% 
  Laboratory Products and Services
  449.9  392.8 15% 
          
 Subtotal Reportable Segments
  923.7  780.1 18% 
          
 Cost of Revenues Charges
  (0.8) (47.6)  
 Restructuring and Other Costs, Net
  0.5  (15.7)  
 Amortization of Acquisition-related Intangible Assets
  (302.8) (281.4)  
          
 Consolidated Operating Income
 $620.6 $435.4 43% 

   Analytical Technologies
  Six Months Ended 
   June 28,  June 30,   
(Dollars in millions)  2008  2007  Change 
        
Revenues $2,248.0 $2,008.7 12% 
          
Operating Income Margin  21.1%  19.3% 1.8 pts. 

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THERMO FISHER SCIENTIFIC INC.

First Six Months 2008 Compared With First Six Months 2007 (continued)

Salesbasis. If an investor is able to meet the criteria to assert that it does not intend to sell the debt security and more likely than not will not be required to sell the debt security before its anticipated recovery, impairment charges related to credit losses would be recognized in the Analytical Technologies segment increased $239 millionearnings whereas impairment charges related to $2.25 billionnon-credit losses would be reflected in other comprehensive income. The company elected early adoption of this pronouncement in the first six months of 2008. The favorable effects of currency translation resulted in an increase of $95 million in 2008. Sales increased $25 million due to acquisitions, net of divestitures. In addition to the changes in revenue resulting from currency translation and acquisitions, net of divestitures, revenues increased $119 million primarily due to higher demand and, to a lesser extent, increased prices. The higher demand was due, in part, to the introduction of new products. Growth was particularly strong in sales of scientific instruments, specialty diagnostics and environmental monitoring instruments.

Operating income margin was 21.1% in the first six months of 2008 and 19.3% in the first six months of 2007. The increase resulted from profit on incremental revenues and, to a lesser extent, price increases and productivity improvements, including material sourcing and lower operating costs following restructuring actions.

   Laboratory Products and Services
  Six Months Ended 
   June 28,  June 30,   
(Dollars in millions)  2008  2007 Change  
        
Revenues $3,224.8 $2,883.2 12% 
          
Operating Income Margin  14.0%  13.6% 0.4 pts. 

Sales in the Laboratory Products and Services segment increased $342 million to $3.22 billion in the first six months of 2008. The favorable effects of currency translation resulted in an increase of $80 million in 2008. Sales increased $78 million due to acquisitions, net of divestitures. In addition to the changes in revenue resulting from currency translation and acquisitions, net of divestitures, revenues increased $184 million primarily due to higher demand and, to a lesser extent, increased prices. Sales made through the segment’s research market and healthcare market channels and revenues from the company’s biopharma services were particularly strong. These increases in revenue were offset in part by lower sales made through the segment’s safety market channel although comparative sales were approximately flat in the second quarter of 2008. The safety market channel sales are in part dependent on expenditures for homeland security that vary based on government spending priorities.

Operating income margin increased to 14.0% in2009 although the first six months of 2008 from 13.6% in the first six months of 2007, primarily due to profit on incremental revenue and, to a lesser extent, price increases and productivity improvements, including material sourcing and lower operating costs following restructuring actions, offset in part by the impact of inflation on commodities such as raw resin, steel and plastics as well as higher fuel and freight costs.

Other Expense, Net

The company reported other expense, net, of $36 million and $47 million in the first six months of 2008 and 2007, respectively (Note 4). The decrease was primarily due to a $6 million increase in interest income as a result of higher invested cash balances from operating cash flow, offset in part by cash used to fund acquisitions and to repurchase the company’s common stock. The increase also resulted from higher net currency transaction gains in 2008.

Provision for Income Taxes

The company’s effective tax rate was 18.0% and 15.8% in the first six months of 2008 and 2007, respectively. The tax provision in the first six months of 2008 was favorably affected by $9.6 million or 1.6 percentage points resulting from the impact on deferred tax balances of enacted reductions in tax rates in Switzerland. Aside from the impact of this item, the tax rate was unfavorably affected by an increase in income in higher tax jurisdictions.

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THERMO FISHER SCIENTIFIC INC.

First Six Months 2008 Compared With First Six Months 2007 (continued)

Discontinued Operations

During the second quarter of 2008, the company recorded the reversal of a reserve on a note receivable related to a business divested in 2003, resulting in an after-tax gain of $3 million. The note was collected in July 2008.rule did not materially affect its financial statements.

In April 2009, the second quarterFASB issued FSP No. FAS 107-1 and APB 28-1, “Interim Disclosures about Fair Value of 2007,Financial Instruments.” This FSP requires the company recorded a non-cash impairment charge of $27 million on a business held for sale. The loss primarily representedfair value disclosures required by FAS 107 regarding the carryingfair value of the businessfinancial instruments to be included in excess of the estimated disposal value. During the second quarter of 2007, the company receivedinterim financial statements. This FSP is effective for interim periods ending after June 15, 2009, and requires additional proceeds relating to a sale of a business divested in 2000 and recorded an after-tax gain of $3 million.disclosure from that required currently.

Liquidity and Capital Resources

Consolidated working capital was $2.42$3.02 billion at JuneMarch 28, 2008,2009, compared with $1.76$2.81 billion at December 31, 2007.2008. The increase was primarily due to increasesan increase in accounts receivable, cash and, to a lesser extent, inventories.cash. Included in working capital were cash, cash equivalents and short-term available-for-sale investments of $1.02$1.57 billion at JuneMarch 28, 20082009 and $639 million$1.29 billion at December 31, 2007.2008.

First SixThree Months 20082009

Cash provided by operating activities was $590$359 million during the first six monthsquarter of 2008. Increases2009. A decrease in accounts receivable and inventoriesan increase in accounts payable provided cash of $29 million and $81 million, respectively. The decrease in accounts receivable was primarily a result of lower sales in the first quarter of 2009 than in the fourth quarter of 2008. The increase in accounts payable partially reversed a decrease that occurred in 2008 and was due primarily to the timing of payments. A decrease in other liabilities used cash of $101$77 million, primarily as a result of annual incentive compensation, interest and $64restructuring payments. Payments for restructuring actions, principally severance costs and lease and other expenses of real estate consolidation, used cash of $10 million respectively, representing working capital increases associated withduring the growth in revenues.first quarter of 2009. Cash payments for income taxes totaled $136$21 million in the first six monthsquarter of 2008 compared with $59 million in the 2007 period, primarily as a result2009. The company expects that for all of no longer having tax loss carryforwards in the U.S.2009, cash payments for income taxes will approximate $275 - $300 million.

During the first six monthsquarter of 2008,2009, the company’s primary investing activities included acquisitions and the purchase of property, plant and equipment. The company expended $43 million for acquisitions and $109$51 million for purchases of property, plant and equipment.

The company’s financing activities used $56provided $10 million of cash during the first six monthsquarter of 2009, including $5 million for proceeds from the exercise of employee stock options. On September 11, 2008, principally forthe Board of Directors authorized the repurchase of $102up to $500 million of the company’s common stock and repaymentthrough September 10, 2009. No stock was repurchased in the first quarter of $162009. At March 28, 2009, $415 million of debt, offset in part by proceeds of stock option exercises. The company had proceeds of $49 million from the exercise of employee stock options and $12 million of tax benefits from the exercise of stock options. As of June 28, 2008, no remaining Board of Directors’ authorization existswas available for future repurchases.repurchases of the company’s common stock under this authorization.

In the third quarter of 2008, through July 31, 2008,            On April 30, 2009, the company acquired businessescompleted the acquisition of Biolab, an Australia-based provider of analytical instruments, life science consumables and laboratory equipment for aggregate cash consideration of approximately $79 million.AUD $175 million (approximately USD $120 million).

The company has no material commitments for purchases of property, plant and equipment and expects that for all of 2008,2009, such expenditures will approximate $230 - $250 million. The company’s contractual obligations and other commercial commitments did not change materially between December 31, 20072008 and JuneMarch 28, 2008.2009.

As of March 28, 2009, the company’s outstanding debt totaled $2.03 billion, of which approximately $0.9 billion is convertible debt, at conversion prices ranging from $23.73 to $40.20 per share. As of May 1, 2009, $295 million of the convertible debt was currently convertible. Although the company’s experience is that convertible debentures are not normally converted by investors until close to their maturity date, it is possible, particularly in the current uncertain financial climate, that debentures could be converted prior to their maturity date if, for example, a holder perceives the market for the debentures to be weaker than the market for the common stock. Upon an investor’s election to convert, the company is required to pay the original principal portion of these debentures in cash, and the balance of the conversion value in either cash or stock, at the company's election. Should holders elect to convert, the company intends to draw on its revolving credit facility to fund substantially all of these principal payments. The facility is an unsecured revolving credit agreement expiring in 2012 with available capacity of $951 million at March 28, 2009.

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THERMO FISHER SCIENTIFIC INC.

First Three Months 2009 (continued)

The company believes that its existing resources, including cash and short-term investments of $1.57 billion as of March 28, 2009, and the company’s future cash flow from operations andtogether with available borrowingsborrowing capacity under its existing revolving credit facilities,agreement, are sufficient to meet the working capitalcash requirements of its existing businesses for the foreseeable future, including at least the next 24 months.

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THERMO FISHER SCIENTIFIC INC.

First SixThree Months 20072008

Cash provided by operating activities was $554$243 million during the first six monthsquarter of 2007.2008. An increase in accounts receivable used cash of $96 million due to strong shipments in the last month of the first quarter of 2008. A reduction in other current liabilities used cash of $61$68 million, primarily as a result of payment of annual incentive compensation as well as $51 million of merger-related payments. Cash payments for income taxes, net of refunds, totaled $59 million in the first six months of 2007.compensation. Cash of $58$45 million was used to replenish inventory levels following strong fourth quarter shipments. Payments for restructuring actions of the company’s continuing operations, principally severance, lease costs and other expenses of real estate consolidation, used cash of $23 million during the first six months of 2007.

During the first six monthsquarter of 2007,2008, the primary investing activities of the company’s continuing operations excluding available-for-sale investment activities, included acquisitions and the purchase of property, plant and equipment. The company expended $39 million on acquisitions and $72$54 million for purchases of property, plant and equipment. The company collected a note receivable from Newport Corporation totaling $48 million and had proceeds from the sale of property, plant and equipment of $14 million, principally real estate. The company’s discontinued operations had cash flows of $29 million from investing activities, principally the sale of Genevac, Ltd.

The company’s financing activities used $221$68 million of cash during the first six monthsquarter of 2007,2008, principally for the repaymentrepurchase of $453$102 million of short-term debt,the company’s common stock, offset in part by proceeds of stock option exercises. The company had proceeds of $224$29 million from the exercise of employee stock options and $17$7 million of tax benefits from the exercise of stock options.

Item 3.Quantitative and Qualitative Disclosures About Market Risk

The company’s exposure to market risk from changes in interest rates, currency exchange rates and equity prices has not changed materially from its exposure at year-end 2007.2008.

Item 4.Controls and Procedures

The company’s management, with the participation of the company’s chief executive officer and chief financial officer, evaluated the effectiveness of the company’s disclosure controls and procedures as of JuneMarch 28, 2008.2009. The term “disclosure controls and procedures,” as defined in Rules 13a-15(e) and 15d-15(e) under the Exchange Act, means controls and other procedures of a company that are designed to ensure that information required to be disclosed by a company in the reports that it files or submits under the Exchange Act is recorded, processed, summarized and reported, within the time periods specified in the SEC’s rules and forms. Disclosure controls and procedures include, without limitation, controls and procedures designed to ensure that information required to be disclosed by a company in the reports that it files or submits under the Exchange Act is accumulated and communicated to the company’s management, including its principal executive and principal financial officers, as appropriate to allow timely decisions regarding required disclosure. Management recognizes that any controls and procedures, no matter how well designed and operated, can provide only reasonable assurance of achieving their objectives and management necessarily applies its judgment in evaluating the cost-benefit relationship of possible controls and procedures. Based on the evaluation of the company’s disclosure controls and procedures as of JuneMarch 28, 2008,2009, the company’s chief executive officer and chief financial officer concluded that, as of such date, the company’s disclosure controls and procedures were effective at the reasonable assurance level.

There have been no changes in the company’s internal control over financial reporting (as defined in Exchange Act Rules 13a-15(f) and 15d-15(f)) during the fiscal quarter ended JuneMarch 28, 2008,2009, that have materially affected or are reasonably likely to materially affect the company’s internal control over financial reporting.

 
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PART II — OTHER INFORMATION

Item 1A.Risk Factors

Set forth below are the risks that we believe are material to our investors. This section contains forward-looking statements. You should refer to the explanation of the qualifications and limitations on forward-looking statements beginning on page 20.

We must develop new products, adapt to rapid and significant technological change and respond to introductions of new products in order to remain competitive. Our growth strategy includes significant investment in and expenditures for product development. We sell our products in several industries that are characterized by rapid and significant technological changes, frequent new product and service introductions and enhancements and evolving industry standards. Without the timely introduction of new products, services and enhancements, our products and services will likely become technologically obsolete over time, in which case our revenue and operating results would suffer.

It may be difficult for us to implement our strategies for improving internal growth. Some of the markets in which we compete have been flat or declining over the past several years. To address this issue, we are pursuing a number of strategies to improve our internal growth, including:

finding new markets for our products;

developing new applications for our technologies;

combining sales and marketing operations in appropriate markets to compete more effectively;

allocating research and development funding to products with higher growth prospects;

continuing key customer initiatives;

expanding our service offerings;

strengthening our presence in selected geographic markets; and

continuing the development of commercial tools and infrastructure to increase and support cross-selling opportunities of products and services to take advantage of our breadth in product offerings.

We may not be able to successfully implement these strategies, and these strategies may not result in the growth of our business.

Our business is impacted by general economic conditions and related uncertainties affecting markets in which we operate. The current economic conditions including the credit crisis affecting the financial markets and the global recession could adversely impact our business in the remainder of 2009 and beyond, resulting in:

reduced demand for some of our products;

increased rate of order cancellations or delays;

increased risk of excess and obsolete inventories;

increased pressure on the prices for our products and services; and

greater difficulty in collecting accounts receivable.

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Item 1A.Risk Factors (continued)

Development of our products requires significant investment; our products and technologies could become uncompetitive or obsolete. Our customers use many of our products to develop, test and manufacture their own products. As a result, we must anticipate industry trends and develop products in advance of the commercialization of our customers’ products. If we fail to adequately predict our customers’ needs and future activities, we may invest heavily in research and development of products and services that do not lead to significant revenue.

Many of our existing products and those under development are technologically innovative and require significant planning, design, development and testing at the technological, product and manufacturing-process levels. These activities require us to make significant investments.

Products in our markets undergo rapid and significant technological change because of quickly changing industry standards and the introduction of new products and technologies that make existing products and technologies uncompetitive or obsolete. Our competitors may adapt more quickly to new technologies and changes in customers’ requirements than we can. The products that we are currently developing, or those we will develop in the future, may not be technologically feasible or accepted by the marketplace, and our products or technologies could become uncompetitive or obsolete.

It may be difficultDemand for us to implementmost of our strategiesproducts depends on capital spending policies of our customers and on government funding policies. Our customers include pharmaceutical and chemical companies, laboratories, universities, healthcare providers, government agencies and public and private research institutions. Many factors, including public policy spending priorities, available resources and product and economic cycles, have a significant effect on the capital spending policies of these entities. These policies in turn can have a significant effect on the demand for improving internal growth. Some of the markets in which we compete have been flat or declining over the past several years. To address this issue, we are pursuing a number of strategies to improve our internal growth, including:products.

finding new marketsAs a multinational corporation, we are exposed to fluctuations in currency exchange rates, which could adversely affect our cash flows and results of operations. International revenues account for a substantial portion of our products;

developing new applications for our technologies;

combining salesrevenues, and marketing operations in appropriate marketswe intend to compete more effectively;

allocating research and development funding to products with higher growth prospects;

continuing key customer initiatives;

continue expanding our service offerings;

strengthening our presence in selected geographic markets;international markets. In 2008, our international revenues from continuing operations, including export revenues from the United States, accounted for a significant percentage of our total revenues. The exposure to fluctuations in currency exchange rates takes on different forms. International revenues are subject to the risk that fluctuations in exchange rates could adversely affect product demand and

continuing the development of commercial tools and infrastructure to increase and support cross-selling opportunitiesprofitability in U.S. dollars of products and services provided by us in international markets, where payment for our products and services is made in the local currency. As a multinational corporation, our businesses occasionally invoice third-party customers in currencies other than the one in which they primarily do business (the “functional currency”). Movements in the invoiced currency relative to take advantagethe functional currency could adversely impact our cash flows and our results of operations. In addition, reported sales made in non-U.S. currencies by our international businesses, when translated into U.S. dollars for financial reporting purposes, fluctuate due to exchange rate movement. Should our international sales grow, exposure to fluctuations in currency exchange rates could have a larger effect on our financial results. In 2008, currency translation had a favorable effect on revenues of our breadthcontinuing operations of $113 million due to a weakening of the U.S. dollar relative to other currencies in product offerings.

We may not be able to successfully implement these strategies,which the company sells products and these strategies may not resultservices, but in the growthfirst quarter of 2009 currency translation had an unfavorable effect on revenues of our business.continuing operations of $133 million due to the strengthening of the U.S. dollar relative to other currencies in which the company sells products and services.

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Item 1A.Risk Factors (continued)

Our inability to protect our intellectual property could have a material adverse effect on our business. In addition, third parties may claim that we infringe their intellectual property, and we could suffer significant litigation or licensing expense as a result. We place considerable emphasis on obtaining patent and trade secret protection for significant new technologies, products and processes because of the length of time and expense associated with bringing new products through the development process and into the marketplace. Our success depends in part on our ability to develop patentable products and obtain and enforce patent protection for our products both in the United States and in other countries. We own numerous U.S. and foreign patents, and we intend to file additional applications, as appropriate, for patents

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Item 1A.Risk Factors (continued)

covering our products. Patents may not be issued for any pending or future patent applications owned by or licensed to us, and the claims allowed under any issued patents may not be sufficiently broad to protect our technology. Any issued patents owned by or licensed to us may be challenged, invalidated or circumvented, and the rights under these patents may not provide us with competitive advantages. In addition, competitors may design around our technology or develop competing technologies. Intellectual property rights may also be unavailable or limited in some foreign countries, which could make it easier for competitors to capture increased market position. We could incur substantial costs to defend ourselves in suits brought against us or in suits in which we may assert our patent rights against others. An unfavorable outcome of any such litigation could materially adversely affect our business and results of operations.

We also rely on trade secrets and proprietary know-how with which we seek to protect our products, in part, by confidentiality agreements with our collaborators, employees and consultants. These agreements may be breached and we may not have adequate remedies for any breach. In addition, our trade secrets may otherwise become known or be independently developed by our competitors.

Third parties may assert claims against us to the effect that we are infringing on their intellectual property rights. For example, in September 2004 Applied Biosystems/MDS Scientific Instruments and related parties brought a lawsuit against us alleging our mass spectrometer systems infringe a patent held by the plaintiffs. We could incur substantial costs and diversion of management resources in defending these claims, which could have a material adverse effect on our business, financial condition and results of operations. In addition, parties making these claims could secure a judgment awarding substantial damages, as well as injunctive or other equitable relief, which could effectively block our ability to make, use, sell, distribute, or market our products and services in the United States or abroad. In the event that a claim relating to intellectual property is asserted against us, or third parties not affiliated with us hold pending or issued patents that relate to our products or technology, we may seek licenses to such intellectual property or challenge those patents. However, we may be unable to obtain these licenses on commercially reasonable terms, if at all, and our challenge of the patents may be unsuccessful. Our failure to obtain the necessary licenses or other rights could prevent the sale, manufacture, or distribution of our products and, therefore, could have a material adverse effect on our business, financial condition and results of operations.

Demand for most of our products depends on capital spending policies of our customers and on government funding policies. Our customers include pharmaceutical and chemical companies, laboratories, universities, healthcare providers, government agencies and public and private research institutions. Many factors, including public policy spending priorities, available resources and product and economic cycles, have a significant effect on the capital spending policies of these entities. These policies in turn can have a significant effect on the demand for our products.

Our results could be impacted if we are unable to realize potential future benefits from new productivity initiatives. We continue to pursue practical process improvement (PPI) programs and other cost saving initiatives at our locations which are designed to further enhance our productivity, efficiency and customer satisfaction. While we anticipate continued benefits from these initiatives, future benefits are expected to be fewer and smaller in size and may be more difficult to achieve.

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Item 1A.Risk Factors (continued)

Our business is impacted by general economic conditions and related uncertainties affecting markets in which we operate. Adverse economic conditions could adversely impact our business in 2008 and beyond, resulting in:

reduced demand for some of our products;

increased rate of order cancellations or delays;

increased risk of excess and obsolete inventories;

increased pressure on the prices for our products and services; and

greater difficulty in collecting accounts receivable.

Changes in governmental regulations may reduce demand for our products or increase our expenses. We compete in many markets in which we and our customers must comply with federal, state, local and international regulations, such as environmental, health and safety and food and drug regulations. We develop, configure and market our products to meet customer needs created by those regulations. Any significant change in regulations could reduce demand for our products or increase our expenses. For example, many of our instruments are marketed to the pharmaceutical industry for use in discovering and developing drugs. Changes in the U.S. Food and Drug Administration’s regulation of the drug discovery and development process could have an adverse effect on the demand for these products.

If any of our security products fail to detect explosives or radiation, we could be exposed to product liability and related claims for which we may not have adequate insurance coverage. The products sold by our environmental instruments business include a comprehensive range of fixed and portable instruments used for chemical, radiation and trace explosives detection. These products are used in airports, embassies, cargo facilities, border crossings and other high-threat facilities for the detection and prevention of terrorist acts. If any of these products were to malfunction, it is possible that explosive or radioactive material could pass through the product undetected, which could lead to product liability claims. There are also many other factors beyond our control that could lead to liability claims, such as the reliability and competence of the customers’ operators and the training of such operators. Any such product liability claims brought against us could be significant and any adverse determination may result in liabilities in excess of our insurance coverage. Although we carry product liability insurance, we cannot be certain that our current insurance will be sufficient to cover these claims or that it can be maintained on acceptable terms, if at all.

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Item 1A.Risk Factors (continued)

Our inability to successfully identify and complete acquisitions or successfully integrate any new or previous acquisitions could have a material adverse effect on our business. Our business strategy includes the acquisition of technologies and businesses that complement or augment our existing products and services. Promising acquisitions are difficult to identify and complete for a number of reasons, including competition among prospective buyers and the need for regulatory, including antitrust, approvals. We may not be able to identify and successfully complete transactions. Any acquisition we may complete may be made at a substantial premium over the fair value of the net assets of the acquired company. Further, we may not be able to integrate any acquired businesses successfully into our existing businesses, make such businesses profitable, or realize anticipated cost savings or synergies, if any, from these acquisitions, which could adversely affect our business.

Moreover, we have acquired many companies and businesses. As a result of these acquisitions, we recorded significant goodwill and indefinite-lived intangible assets on our balance sheet, which amount to approximately $8.72$8.66 billion and $1.33 billion, respectively, as of JuneMarch 28, 2008.2009. We assess the realizability of the goodwill and indefinite-lived intangible assets annually as well as whenever events or changes in circumstances indicate that these assets may be impaired. These events or circumstances generally include operating losses or a significant decline in earnings associated with the acquired business or asset. Our ability to realize the value of the goodwill and indefinite-lived intangible assets will depend on the future cash flows of these businesses. These cash flows in turn depend in part on how well we have integrated these businesses. If we are not able to realize the value of the goodwill and indefinite-lived intangible assets, we may be required to incur material charges relating to the impairment of those assets.

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Item 1A.Risk Factors (continued)
Our growth strategy to acquire new businesses may not be successful and the integration of future acquisitions may be difficult and disruptive to our ongoing operations.

We have retained contingent liabilities from businesses that we have sold. From 1997 through 2004, we divested over 60 businesses with aggregate annual revenues in excess of $2 billion. As part of these transactions, we retained responsibility for some of the contingent liabilities related to these businesses, such as lawsuits, product liability and environmental claims and potential claims by buyers that representations and warranties we made about the businesses were inaccurate. The resolution of these contingencies has not had a material adverse effect on our results of operations or financial condition; however, we can not be certain that this favorable pattern will continue.

As a multinational corporation, we are exposed to fluctuations in currency exchange rates, which could adversely affect our cash flows and results of operations. International revenues account for a substantial portion of our revenues, and we intend to continue expanding our presence in international markets. In 2007, our international revenues from continuing operations, including export revenues from the United States, accounted for approximately 35% of our total revenues. The exposure to fluctuations in currency exchange rates takes on different forms. International revenues are subject to the risk that fluctuations in exchange rates could adversely affect product demand and the profitability in U.S. dollars of products and services provided by us in international markets, where payment for our products and services is made in the local currency. As a multinational corporation, our businesses occasionally invoice third-party customers in currencies other than the one in which they primarily do business (the “functional currency”). Movements in the invoiced currency relative to the functional currency could adversely impact our cash flows and our results of operations. In addition, reported sales made in non-U.S. currencies by our international businesses, when translated into U.S. dollars for financial reporting purposes, fluctuate due to exchange rate movement. Should our international sales grow, exposure to fluctuations in currency exchange rates could have a larger effect on our financial results. In 2007, currency translation had a favorable effect on revenues of our continuing operations of $241 million due to a weakening of the U.S. dollar relative to other currencies in which the company sells products and services.

We are subject to laws and regulations governing government contracts, and failure to address these laws and regulations or comply with government contracts could harm our business by leading to a reduction in revenue associated with these customers. We have agreements relating to the sale of our products to government entities and, as a result, we are subject to various statutes and regulations that apply to companies doing business with the government. The laws governing government contracts differ from the laws governing private contracts and government contracts may contain pricing terms and conditions that are not applicable to private contracts. We are also subject to investigation for compliance with the regulations governing government contracts. A failure to comply with these regulations could result in suspension of these contracts, criminal, civil and administrative penalties or debarment.

Because we compete directly with certain of our largest customers and product suppliers, our results of operations could be adversely affected in the short term if these customers or suppliers abruptly discontinue or significantly modify their relationship with us.

Our largest customer in the laboratory consumables business and our largest customer in the diagnostics business are also significant competitors. Our business may be harmed in the short term if our competitive relationship in the marketplace with these customers results in a discontinuation of their purchases from us. In addition, we manufacture products that compete directly with products that we source from third-party suppliers. We also source competitive products from multiple suppliers. Our business could be adversely affected in the short term if any of our large third-party suppliers abruptly discontinues selling products to us.

 
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Item 1A.Risk Factors (continued)

Because we rely heavily on third-party package-delivery services, a significant disruption in these services or significant increases in prices may disrupt our ability to ship products, increase our costs and lower our profitability.

We ship a significant portion of our products to our customers through independent package delivery companies, such as UPS and Federal Express in the U.S. and DHL in Europe. We also maintain a small fleet of vehicles dedicated to the delivery of our products and ship our products through other carriers, including national and regional trucking firms, overnight carrier services and the U.S. Postal Service. If UPS or another third-party package-delivery provider experiences a major work stoppage, preventing our products from being delivered in a timely fashion or causing us to incur additional shipping costs we could not pass on to our customers, our costs could increase and our relationships with certain of our customers could be adversely affected. In addition, if UPS or our other third-party package-delivery providers increase prices, and we are not able to find comparable alternatives or make adjustments in our delivery network, our profitability could be adversely affected.

We are subject to regulation by various federal, state and foreign agencies that require us to comply with a wide variety of regulations, including those regarding the manufacture of products, the shipping of our products and environmental matters.

Some of our operations are subject to regulation by the U.S. Food and Drug Administration and similar international agencies. These regulations govern a wide variety of product activities, from design and development to labeling, manufacturing, promotion, sales and distribution. If we fail to comply with the U.S. Food and Drug Administration’s regulations or those of similar international agencies, we may have to recall products and cease their manufacture and distribution, which would increase our costs and reduce our revenues.

We are subject to federal, state, local and international laws and regulations that govern the handling, transportation, manufacture, use or sale of substances that are or could be classified as toxic or hazardous substances. Some risk of environmental damage is inherent in our operations and the products we manufacture, sell or distribute. This requires us to devote significant resources to maintain compliance with applicable environmental laws and regulations, including the establishment of reserves to address potential environmental costs, and manage environmental risks.

We rely heavily on manufacturing operations to produce the products we sell, and our business could be adversely affected by disruptions of our manufacturing operations.

We rely upon our manufacturing operations to produce many of the products we sell. Any significant disruption of those operations for any reason, such as strikes or other labor unrest, power interruptions, fire, earthquakes, or other events beyond our control could adversely affect our sales and customer relationships and therefore adversely affect our business. Although most of our raw materials are available from a number of potential suppliers, our operations also depend upon our ability to obtain raw materials at reasonable prices. If we are unable to obtain the materials we need at a reasonable price, we may not be able to produce certain of our products or we may not be able to produce certain of these products at a marketable price, which could have an adverse effect on our results of operations.

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Item 1A.Risk Factors (continued)
We may be unable to adjust to rapid changes in the healthcare industry, some of which could adversely affect our business.

The healthcare industry has undergone significant changes in an effort to reduce costs. These changes include:

development of large and sophisticated groups purchasing medical and surgical supplies;

wider implementation of managed care;

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Item 1A.Risk Factors (continued)

legislative healthcare reform;

consolidation of pharmaceutical companies;

increased outsourcing of certain activities, including to low-cost offshore locations; and

consolidation of distributors of pharmaceutical, medical and surgical supplies.

We expect the healthcare industry to continue to change significantly in the future. Some of these potential changes, such as a reduction in governmental support of healthcare services or adverse changes in legislation or regulations governing the delivery or pricing of healthcare services or mandated benefits, may cause healthcare-industry participants to purchase fewer of our products and services or to reduce the prices they are willing to pay for our products or services.

Fluctuations in our effective tax rate may adversely affect our business, results of operations and cash flows.
As a global company, we are subject to taxation in numerous countries, states and other jurisdictions. In preparing our financial statements, we record the amount of tax that is payable in each of the countries, states and other jurisdictions in which we operate. Our future effective tax rate, however, may be lower or higher than experienced in the past due to numerous factors, including a change in the mix of our profitability from country to country, changes in accounting for income taxes and recently enacted and future changes in tax laws in jurisdictions in which we operate. Any of these factors could cause us to experience an effective tax rate significantly different from previous periods or our current expectations, which could have an adverse effect on our business, results of operations and cash flows.

We may incur unexpected costs from increases in fuel and raw material prices, which could reduce our earnings and cash flow.

Our primary commodity exposures are for fuel, petroleum-based resins, steel and serum. While we may seek to minimize the impact of price increases through higher prices to customers and various cost-saving measures, our earnings and cash flows could be adversely affected in the event these measures are insufficient to cover our costs.

Unforeseen problems with the implementation and maintenance of our information systems at certain of our sites could interfere with our operations. As a part of the effort to upgrade our current information systems, we are implementing new enterprise resource planning software and other software applications to manage certain of our business operations. As we implement and add functionality, problems could arise that we have not foreseen. Such problems could adversely impact our ability to do the following in a timely manner: provide quotes, take customer orders, ship products, provide services and support to our customers, bill and track our customers, fulfill contractual obligations and otherwise run our business. In addition, if our new systems fail to provide accurate and increased visibility into pricing and cost structures, it may be difficult to improve or maximize our profit margins. As a result, our results of operations and cash flows could be adversely affected.

Our debt may adversely affect our cash flow and may restrict our investment opportunities or limit our activities.

As of JuneMarch 28, 2008,2009, we had approximately $2.19$2.03 billion in outstanding indebtedness. In addition, we had the ability to incur an additional $942$951 million of indebtedness under our revolving credit facility. We may also obtain additional long-term debt and lines of credit to meet future financing needs, which would have the effect of increasing our total leverage.

 
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Item 1A.Risk Factors (continued)

Our leverage could have negative consequences, including increasing our vulnerability to adverse economic and industry conditions, limiting our ability to obtain additional financing and limiting our ability to acquire new products and technologies through strategic acquisitions.

Our ability to satisfy our obligations depends on our future operating performance and on economic, financial, competitive and other factors beyond our control. Our business may not generate sufficient cash flow to meet these obligations. If we are unable to service our debt or obtain additional financing, we may be forced to delay strategic acquisitions, capital expenditures or research and development expenditures. We may not be able to obtain additional financing on terms acceptable to us or at all.

Additionally, the agreements governing our debt require that we maintain certain financial ratios, and contain affirmative and negative covenants that restrict our activities by, among other limitations, limiting our ability to incur additional indebtedness, make investments, create liens, sell assets and enter into transactions with affiliates. The covenants in our revolving credit facility include a debt-to-EBITDA ratio. Specifically, the company has agreed that, so long as any lender has any commitment under the facility, or any loan or other obligation is outstanding under the facility, or any letter of credit is outstanding under the facility, it will not permit (as the following terms are defined in the facility) the Consolidated Leverage Ratio (the ratio of consolidated Indebtedness to Consolidated EBITDA) as at the last day of any fiscal quarter to be greater than 3.0 to 1.0.

Our ability to comply with these financial restrictions and covenants is dependent on our future performance, which is subject to prevailing economic conditions and other factors, including factors that are beyond our control such as foreign exchange rates and interest rates. Our failure to comply with any of these restrictions or covenants may result in an event of default under the applicable debt instrument, which could permit acceleration of the debt under that instrument and require us to prepay that debt before its scheduled due date. Also, an acceleration of the debt under one of our debt instruments would trigger an event of default under other of our debt instruments.

Item 4.Submission of Matters to a Vote of Security Holders

At the company’s Annual Meeting of Stockholders held on May 20, 2008, the stockholders elected a class of three incumbent directors, Scott M. Sperling, Bruce L. Koepfgen and Michael E. Porter, to a three-year term expiring at the 2011 Annual Meeting of Stockholders. In addition, the stockholders approved the adoption of the Thermo Fisher Scientific Inc. 2008 Stock Incentive Plan and the Thermo Fisher Scientific Inc. 2008 Annual Incentive Award Plan and ratified the selection by the Audit Committee of the company’s Board of Directors of PricewaterhouseCoopers LLP as the company’s independent auditors for the fiscal year ending December 31, 2008. The results of the votes for each of these proposals were as follows:

Proposal 1 — Election of three directors, constituting the class of directors to be elected for a three-year term expiring in 2011:

  For Against Abstained 
Broker
 Non-Votes
 
          
Scott M. Sperling 348,859,804 18,092,169 4,286,046 4,578 
Bruce L. Koepfgen 350,902,727 16,012,559 4,322,732 4,579 
Michael E. Porter 345,100,824 21,849,307 4,287,891 4,575 

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Item 4.Submission of Matters to a Vote of Security Holders (continued)

Proposal 2 — Approval and adoption of the Thermo Fisher Scientific Inc. 2008 Stock Incentive Plan:

                 For          Against      Abstained 
Broker
   Non-Votes
        
 282,222,575 56,685,728 4,441,288 27,893,006

Proposal 3 — Approval and adoption of the Thermo Fisher Scientific Inc. 2008 Annual Incentive Award Plan:

                 For          Against      Abstained 
Broker
   Non-Votes
        
 351,990,116 13,413,730 4,636,101 1,202,650

Proposal 4 — Ratification of selection by the Audit Committee of the company’s Board of Directors of PricewaterhouseCoopers LLP as the company’s independent auditors for the fiscal year ending December 31, 2008:

                 For          Against      Abstained 
Broker
   Non-Votes
        
 362,322,452 3,325,104 4,392,398 1,202,643

Item 6.Exhibits

See Exhibit Index on page 39.36.

 
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SIGNATURES

Pursuant to the requirements of the Securities Exchange Act of 1934, the Registrant has duly caused this report to be signed on its behalf by the undersigned thereunto duly authorized as of the 31st1st day of July 2008.May 2009.

 THERMO FISHER SCIENTIFIC INC.
  
  
  
 /s/ Peter M. Wilver
 Peter M. Wilver
 Senior Vice President and Chief Financial Officer
  
  
  
 /s/ Peter E. Hornstra
 Peter E. Hornstra
 Vice President and Chief Accounting Officer

 
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EXHIBIT INDEX

Exhibit
Number
 Description of Exhibit

3.1Bylaws of the company, as amended and effective as of May 15, 2008.
10.1 Form of Thermo Fisher Scientific Stock Option Agreement for use in connection with the grant of stock options under the Registrant’s equity plans to directors of the Registrant.
10.2Thermo Fisher Scientific Inc. 2008 Stock Incentive Plan (filed as Exhibit 10.1 to the Registrant’s Current Report on Form 8-K filed May 22, 2008 [File No. 1-8002] and incorporated in this document by reference).
10.3Thermo Fisher Scientific Inc. 2008 Annual Incentive Award Plan (filed as Exhibit 10.2 to the Registrant’s Current Report on Form 8-K filed May 22, 2008 [File No. 1-8002] and incorporated in this document by reference).
10.4Form of Executive Change in Control Retention Agreement for Officers dated May 15, 2008 (filed as Exhibit 10.1 to the Registrant’s Current Report on Form 8-K filed May 19, 2008 [File No. 1-8002] and incorporated in this document by reference).
10.5Thermo Fisher Scientific Inc. Executive Severance Policy (filed as Exhibit 10.2 to the Registrant’s Current Report on Form 8-K filed May 19, 2008 [File No. 1-8002] and incorporated in this document by reference).
10.6Stock OptionLetter Agreement dated May 15, 2008March 3, 2009, between the Registrant and Marc Casper (filed as Exhibit 10.3 to the Registrant’s Current Report on Form 8-K filed May 19, 2008 [File No. 1-8002] and incorporated in this document by reference).Stephen Sheehan.
   
31.1 Certification of Chief Executive Officer required by Exchange Act Rules 13a-14(a) and 15d-14(a), as adopted pursuant to Section 302 of the Sarbanes-Oxley Act of 2002.
   
31.2 Certification of Chief Financial Officer required by Exchange Act Rules 13a-14(a) and 15d-14(a), as adopted pursuant to Section 302 of the Sarbanes-Oxley Act of 2002.
   
32.1 Certification of Chief Executive Officer required by Exchange Act Rules 13a-14(b) and 15d-14(b), as adopted pursuant to Section 906 of the Sarbanes-Oxley Act of 2002.*
   
32.2 
Certification of Chief Financial Officer required by Exchange Act Rules 13a-14(b) and 15d-14(b), as adopted pursuant to Section 906 of the Sarbanes-Oxley Act of 2002.*
_________________
*
Certification is not deemed “filed” for purposes of Section 18 of the Exchange Act, or otherwise subject to the liability of that section. Such certification is not deemed to be
   incorporated by reference into any filing under the Securities Act or the Exchange Act, except to the extent that the registrant specifically incorporates it by reference.

 
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