UNITED STATES
SECURITIES AND EXCHANGE COMMISSION
Washington, D.C. 20549
FORM 10-Q

ý     QUARTERLY REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934.
For the quarterly period ended June 30, 20192020

OR

o        TRANSITION REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934

For the transition period from                to                
Commission file number 001-33133
YIELD10 BIOSCIENCE, INC.
Delaware 04-3158289
(State or other jurisdiction of
incorporation or organization)
 
(I.R.S. Employer
Identification No.)
   
19 Presidential Way
Woburn, MA
 01801
(Address of principal executive offices) (Zip Code)
(617) 583-1700
(Registrant’s telephone number, including area code)
(Former name, former address and former fiscal year, if changed since last report.)
Securities registered pursuant to Section 12(b) of the Act:
Title of each classTrading Symbol(s)Name of each exchange on which registered
Common StockYTENThe Nasdaq Capital Market
Indicate by check mark whether the registrant (1) has filed all reports required to be filed by Section 13 or 15(d) of the Securities Exchange Act of 1934 during the preceding 12 months (or for such shorter period that the registrant was required to file such reports), and (2) has been subject to such filing requirements for the past 90 days.  Yes ý  No o
Indicate by check mark whether the registrant has submitted electronically every Interactive Data File required to be submitted pursuant to Rule 405 of Regulation S-T (§232.405 of this chapter) during the preceding 12 months (or for such shorter period that the registrant was required to submit such files). Yes ý  No o
Indicate by check mark whether the registrant is a large accelerated filer, an accelerated filer, a non-accelerated filer, a smaller reporting company, or an emerging growth company. See the definitions of “large accelerated filer,” “acceleratedaccelerated filer, “smaller reporting company”company,” and "emerging growth company" in Rule 12b-2 of the Exchange Act.
Large accelerated fileroAccelerated filero
Non-accelerated filerýSmaller reporting companyý
Emerging growth companyo  
If an emerging growth company, indicate by check mark if the registrant has elected not to use the extended transition period for complying with any new or revised financial accounting standards provided pursuant to Section 13(a) of the Exchange Act. o
Indicate by check mark whether the registrant is a shell company (as defined in Rule 12b-2 of the Exchange Act).  Yes o  No ý

The number of shares outstanding of the registrant’s common stock as of August 7, 20192020 was 12,519,017.1,976,487.
 


Yield10 Bioscience, Inc.
Form 10-Q
For the Quarter Ended June 30, 20192020

Table of Contents

 Page Page
  
Item  
  
  
Item  
  


PART I.  FINANCIAL INFORMATION
ITEM 1.  CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
YIELD10 BIOSCIENCE, INC.
CONDENSED CONSOLIDATED BALANCE SHEETS
UNAUDITED
(in thousands, except share and per share data)

June 30,
2019

December 31,
2018
June 30,
2020

December 31,
2019
Assets      
Current Assets:      
Cash and cash equivalents$3,252
 $3,023
$3,290
 $5,417
Short-term investments998
 2,746
5,211
 5,700
Accounts receivable148
 94
13
 72
Unbilled receivables103
 66
59
 20
Prepaid expenses and other current assets516
 448
417
 475
Total current assets5,017
 6,377
8,990
 11,684
Restricted cash332
 332
254
 332
Property and equipment, net1,298
 1,385
978
 1,243
Right-of-use assets4,467
 4,766
2,879
 3,141
Other assets42
 100
265
 318
Total assets$11,156
 $12,960
$13,366
 $16,718
      
Liabilities and Stockholders’ Equity   
Liabilities, Convertible Preferred Stock and Stockholders’ Equity (Deficit)   
Current Liabilities:      
Accounts payable$55
 $117
$150
 $279
Accrued expenses586
 680
882
 1,326
Lease liabilities865
 844
430
 602
Total current liabilities1,506
 1,641
1,462
 2,207
Lease liabilities, net of current portion5,196
 5,621
3,400
 3,619
Warrant liability
 14,977
Other long-term liabilities17
 
Total liabilities6,702
 7,262
4,879
 20,803
   
Commitments and contingencies (Note 9)
 
   
Stockholders’ Equity:   
Preferred Stock ($0.01 par value per share); 5,000,000 shares authorized; no shares issued or outstanding
 
Common stock ($0.01 par value per share); 60,000,000 shares authorized at June 30, 2019 and December 31, 2018; 12,494,731 and 10,025,811 shares issued and outstanding at June 30, 2019 and December 31, 2018, respectively125
 100
Commitments and contingencies (Note 10)
 
Series B Convertible Preferred Stock ($0.01 par value per share); 0 and 5,750 shares issued and outstanding at June 30, 2020 and December 31, 2019, respectively
 
Stockholders’ Equity (Deficit):   
Series A Convertible Preferred Stock ($0.01 par value per share); 0 shares and 796 shares issued and outstanding at June 30, 2020 and December 31, 2019, respectively
 
Common stock ($0.01 par value per share); 60,000,000 shares authorized at June 30, 2020 and December 31, 2019; 1,972,798 and 933,423 shares issued and outstanding at June 30, 2020 and December 31, 2019, respectively20
 9
Additional paid-in capital360,516
 357,646
378,924
 360,926
Accumulated other comprehensive loss(118) (110)(167) (126)
Accumulated deficit(356,069) (351,938)(370,290) (364,894)
Total stockholders’ equity4,454
 5,698
Total liabilities and stockholders’ equity$11,156
 $12,960
Total stockholders’ equity (deficit)8,487
 (4,085)
Total liabilities, convertible preferred stock and stockholders’ equity (deficit)$13,366
 $16,718

The accompanying notes are an integral part of these interim unaudited condensed consolidated financial statements


YIELD10 BIOSCIENCE, INC.
CONDENSED CONSOLIDATED STATEMENTS OF OPERATIONS
UNAUDITED
(in thousands, except share and per share data)
 
Three Months Ended
June 30,
 Six Months Ended
June 30,
Three Months Ended
June 30,
 
Six Months Ended
June 30,
2019 2018 2019 20182020 2019 2020 2019
Revenue:              
Grant revenue$318
 $285
 $442
 $345
$221
 $318
 $400
 $442
Total revenue318
 285
 442
 345
221
 318
 400
 442
              
Expenses:              
Research and development1,191
 1,260
 2,414
 2,361
1,179
 1,191
 2,639
 2,414
General and administrative1,025
 1,456
 2,211
 2,732
1,179
 1,025
 2,566
 2,211
Total expenses2,216
 2,716
 4,625
 5,093
2,358
 2,216
 5,205
 4,625
Loss from operations(1,898) (2,431) (4,183) (4,748)(2,137) (1,898) (4,805) (4,183)
              
Other income (expense):       
Change in fair value of warrants
 
 (957) 
Loan forgiveness income (Note 9)333
 
 333
 
Other income (expense), net27
 38
 52
 63
15
 27
 48
 52
Total other income (expense)348
 27
 (576) 52
Net loss before income tax expense(1,789) (1,871) (5,381) (4,131)
Income tax expense(7) 
 (15) 
Net loss$(1,871) $(2,393) $(4,131) $(4,685)$(1,796) $(1,871) $(5,396) $(4,131)
              
Basic and diluted net loss per share$(0.15) $(0.24) $(0.36) $(0.48)$(0.92) $(5.99) $(2.95) $(14.36)
              
Number of shares used in per share calculations:              
Basic and diluted12,494,337
 9,991,460
 11,504,314
 9,845,902
1,957,927
 312,342
 1,827,526
 287,592

The accompanying notes are an integral part of these interim unaudited condensed consolidated financial statements


YIELD10 BIOSCIENCE, INC.
CONDENSED CONSOLIDATED STATEMENTS OF COMPREHENSIVE LOSS
UNAUDITED
(in thousands)

Three Months Ended
June 30,
 Six Months Ended
   June 30,
Three Months Ended
June 30,
Six Months Ended
   June 30,
2019 2018 2019 20182020 20192020 2019
Net loss:$(1,871) $(2,393) $(4,131) $(4,685)$(1,796) $(1,871)$(5,396) $(4,131)
Other comprehensive loss            
Change in unrealized gain (loss) on investments
 (1) 
 
(15) 
7
 
Change in foreign currency translation adjustment(3) (9) (8) (14)7
 (3)(48) (8)
Total other comprehensive loss(3) (10) (8) (14)(8) (3)(41) (8)
Comprehensive loss$(1,874) $(2,403) $(4,139) $(4,699)$(1,804) $(1,874)$(5,437) $(4,139)

The accompanying notes are an integral part of these interim unaudited condensed consolidated financial statements


YIELD10 BIOSCIENCE, INC.
CONDENSED CONSOLIDATED STATEMENTS OF CASH FLOWS
UNAUDITED
(in thousands)


Six Months Ended
   June 30,
Six Months Ended
   June 30,
2019 20182020 2019
Cash flows from operating activities      
Net loss$(4,131) $(4,685)$(5,396) $(4,131)
Adjustments to reconcile net loss to cash used in operating activities:      
Depreciation100
 96
91
 100
Change in fair value of warrants957
 
Loss on disposal of fixed assets206
 
Charge for 401(k) company common stock match49
 70
66
 49
Stock-based compensation275
 596
297
 275
Non-cash lease expense299
 145
262
 299
Deferred tax provision27
 
Changes in operating assets and liabilities:      
Accounts receivables(54) 54
Accounts receivable59
 (54)
Unbilled receivables(37) 22
(39) (37)
Prepaid expenses and other assets(10) (56)84
 (10)
Accounts payable(62) (42)(129) (62)
Accrued expenses(102) (926)(390) (102)
Lease liabilities(404) (162)(391) (404)
Other liabilities17
 
Net cash used for operating activities(4,077) (4,888)(4,279) (4,077)


 

 
Cash flows from investing activities      
Purchase of property and equipment(13) (34)(42) (13)
Proceeds from sale of property and equipment10
 
Purchase of short-term investments(998) (7,986)(503) (998)
Proceeds from the sale and maturity of short-term investments2,746
 1,500
999
 2,746
Net cash provided by (used for) investing activities1,735
 (6,520)
Net cash provided by investing activities464
 1,735


 

 
Cash flows from financing activities      
Proceeds from warrants exercised
 124
Proceeds from warrants exercised (Note 12)1,658
 
Proceeds from registered direct offering, net of issuance costs
 2,583
Taxes paid on employees' behalf related to vesting of stock awards(4) (6)
 (4)
Proceeds from registered direct offering, net of issuance costs2,583
 
Net cash provided by financing activities2,579
 118
1,658
 2,579


 

 
Effect of exchange rate changes on cash, cash equivalents and restricted cash(8) (14)(48) (8)


 

 
Net increase (decrease) in cash, cash equivalents and restricted cash229
 (11,304)
Net (decrease) increase in cash, cash equivalents and restricted cash(2,205) 229
Cash, cash equivalents and restricted cash at beginning of period3,355
 14,804
5,749
 3,355
Cash, cash equivalents and restricted cash at end of period$3,584
 $3,500
$3,544
 $3,584
   
Supplemental disclosure of non-cash information:
 
Right-of-use assets acquired in exchange for lease liabilities$
 $74

The accompanying notes are an integral part of these interim unaudited condensed consolidated financial statements


YIELD10 BIOSCIENCE, INC.
CONDENSED CONSOLIDATED STATEMENTS OF SERIES B CONVERTIBLE STOCK AND STOCKHOLDERS' (DEFICIT) EQUITY
(UNAUDITED)UNAUDITED
(In thousands, except share amounts)
 Three Months Ended June 30, 2019
 Series A Convertible            
 Preferred Stock Common Stock        
 Shares Par Value Shares Par Value Additional Paid-In Capital Accumulated other Comprehensive Loss Accumulated Deficit Total Stockholders' Equity
Balance, March 31, 2019
 $
 12,468,219
 $125
 $360,383
 $(115) $(354,198) $6,195
Non-cash stock-based compensation expense
 
 
 
 113
 
 
 113
Issuance of common stock for 401k match
 
 21,860
 
 24
 
 
 24
Issuance of stock for restricted stock unit vesting, net of 2,449 shares withheld for employee taxes
 
 4,652
 
 (4) 
 
 (4)
Effect of foreign currency translation
 
 
 
 
 (3) 
 (3)
Net loss
 
 
 
 
 
 (1,871) (1,871)
Balance, June 30, 2019
 $
 12,494,731
 $125
 $360,516
 $(118) $(356,069) $4,454
 Three Months Ended June 30, 2020
 Series B Convertible Preferred StockSeries A Convertible Preferred Stock Common Stock        
 Shares Par ValueShares Par Value Shares Par Value Additional Paid-In Capital Accumulated Other Comprehensive Income (Loss) Accumulated Deficit Total Stockholders' Equity
Balance, March 31, 2020
 $
296
 $
 1,923,184
 $19
 $377,963
 $(159) $(368,494) $9,329
Non-cash stock-based compensation expense
 

 
 
 
 194
 
 
 194
Issuance of common stock for 401(k) match
 

 
 10,114
 
 38
 
 
 38
Issuance of common stock for warrant exercise (Note 12)
 

 
 2,500
 
 730
     730
Issuance of common stock upon conversion of Series A Convertible Preferred Stock
 
(296) 
 37,000
 1
 (1) 
 
 
Effect of foreign currency translation and unrealized loss on investments
 

 
 
 
 
 (8) 
 (8)
Net loss
 

 
 
 
 
 
 (1,796) (1,796)
Balance, June 30, 2020
 $

 $
 1,972,798
 $20
 $378,924
 $(167) $(370,290) $8,487

 Three Months Ended June 30, 2018
 Series A Convertible            
 Preferred Stock Common Stock        
 Shares Par Value Shares Par Value Additional Paid-In Capital Accumulated other Comprehensive Loss Accumulated Deficit Total Stockholders' Equity
Balance, March 31, 2018
 $
 9,968,455
 $100
 $356,667
 $(89) $(345,045) $11,633
Non-cash stock-based compensation expense
 
 
 
 315
 
 
 315
Issuance of common stock for 401k match
 
 19,121
 
 37
 
 
 37
Issuance of stock for restricted stock unit vesting, net of 2,703 shares withheld for employee taxes
 
 4,401
 
 (6) 
 
 (6)
Effect of foreign currency translation and unrealized gain on investments
 
 
 
 
 (10) 
 (10)
Net loss
 
 
 
 
 
 (2,393) (2,393)
Balance, June 30, 2018
 $
 9,991,977
 $100
 $357,013
 $(99) $(347,438) $9,576
The accompanying notes are an integral part of these interim unaudited condensed consolidated financial statements
 Three Months Ended June 30, 2019
 Series B Convertible Preferred StockSeries A Convertible Preferred Stock Common Stock        
 Shares Par ValueShares Par Value Shares Par Value Additional Paid-In Capital Accumulated other Comprehensive Loss Accumulated Deficit Total Stockholders' Equity
Balance, March 31, 2019
 $

 $
 311,690
 $3
 $360,505
 $(115) $(354,198) $6,195
Non-cash stock-based compensation expense
 

 
 
 
 113
 
 
 113
Issuance of common stock for 401(k) match
 

 
 546
 
 24
 
 
 24
Issuance of common stock for restricted unit release, net of 2,449 shares withheld for employee taxes
 

 
 116
 
 (4) 
 
 (4)
Effect of foreign currency translation and unrealized loss on investments
 

 
 
 
 
 (3) 
 (3)
Net loss
 

 
 
 
 
 
 (1,871) (1,871)
Balance, June 30, 2019
 $

 $
 312,352
 $3
 $360,638
 $(118) $(356,069) $4,454



 Six Months Ended June 30, 2020
 Series B Convertible Preferred StockSeries A Convertible Preferred Stock Common Stock        
 Shares Par ValueShares Par Value Shares Par Value Additional Paid-In Capital Accumulated Other Comprehensive Income (Loss) Accumulated Deficit Total Stockholders' (Deficit) Equity
Balance, December 31, 20195,750
 $
796
 $
 933,423
 $9
 $360,926
 $(126) $(364,894) $(4,085)
Non-cash stock-based compensation expense
 

 
 
 
 354
 
 
 354
Issuance of common stock for 401(k) match
 

 
 13,829
 
 63
 
 
 63
Issuance of common stock for warrant exercise
 

 
 207,296
 2
 1,656
 
 
 1,658
Issuance of common stock upon conversion of Series A Convertible Preferred Stock
 
(796) 
 99,500
 2
 (2) 
 
 
Issuance of common stock upon conversion of Series B Convertible Preferred Stock(5,750) 

 
 718,750
 7
 (7) 
 
 
Reclassification of warrant liability to equity
 

 
 
 
 15,934
 
 
 15,934
Effect of foreign currency translation and unrealized loss on investments
 

 
 
 
 
 (41) 
 (41)
Net loss
 

 
 
 
 
 
 (5,396) (5,396)
Balance, June 30, 2020
 $

 $
 1,972,798
 $20
 $378,924
 $(167) $(370,290) $8,487


YIELD10 BIOSCIENCE, INC.
CONSOLIDATED STATEMENTS OF STOCKHOLDERS' EQUITY
(UNAUDITED)
(In thousands, except share amounts)
 Six Months Ended June 30, 2019
 Series A Convertible            
 Preferred Stock Common Stock        
 Shares Par Value Shares Par Value Additional Paid-In Capital Accumulated other Comprehensive Loss Accumulated Deficit Total Stockholders' Equity
Balance, December 31, 2018
 $
 10,025,811
 $100
 $357,646
 $(110) $(351,938) $5,698
Non-cash stock-based compensation expense
 
 
 
 275
 
 
 275
Issuance of common stock for 401k match
 
 42,606
 
 41
 
 
 41
Issuance of stock for restricted stock unit vesting, net of 2,449 shares withheld for employee taxes
 
 4,652
 
 (4) 
 
 (4)
Issuance of common stock for registered direct offering, net of $349 offering costs
 
 2,421,662
 25
 2,558
 
 
 2,583
Effect of foreign currency translation
 
 
 
 
 (8) 
 (8)
Net loss
 
 
 
 
 
 (4,131) (4,131)
Balance, June 30, 2019
 $
 12,494,731
 $125
 $360,516
 $(118) $(356,069) $4,454
 Six Months Ended June 30, 2018
 Series A Convertible            
 Preferred Stock Common Stock        
 Shares Par Value Shares Par Value Additional Paid-In Capital Accumulated other Comprehensive Loss Accumulated Deficit Total Stockholders' Equity
Balance, December 31, 20171,826
 $818
 9,089,159
 $91
 $355,431
 $(85) $(342,753) $13,502
Non-cash stock-based compensation expense
 
 
 
 596
 
 
 596
Issuance of common stock for 401k match
 
 31,760
 
 59
 
 
 59
Issuance of stock for restricted stock unit vesting, net of 2,703 shares withheld for employee taxes
 
 4,401
 
 (6) 
 
 (6)
Issuance of common stock upon conversion of Series A Convertible Preferred Stock(1,826) (818) 811,557
 8
 810
 
 
 
Issuance of common stock upon exercise of Class B warrants
 
 55,100
 1
 123
 
 
 124
Effect of foreign currency translation and unrealized gain on investments
 
 
 
 
 (14) 
 (14)
Net loss
 
 
 
 
 
 (4,685) (4,685)
Balance, June 30, 2018
 $
 9,991,977
 $100
 $357,013
 $(99) $(347,438) $9,576
 Six Months Ended June 30, 2019
 Series B Convertible Preferred StockSeries A Convertible Preferred Stock Common Stock        
 Shares Par ValueShares Par Value Shares Par Value Additional Paid-In Capital Accumulated other Comprehensive Loss Accumulated Deficit Total Stockholders' Equity
Balance, December 31, 2018
 $

 $
 250,631
 $3
 $357,743
 $(110) $(351,938) $5,698
Non-cash stock-based compensation expense
 

 
 
 
 275
 
 
 275
Issuance of common stock for 401(k) match
 

 
 1,064
 
 41
 
 
 41
Issuance of stock for restricted stock unit vesting, net of 2,449 shares withheld for employee taxes
 

 
 116
 
 (4) 
 
 (4)
Issuance of common stock for registered direct offering , net of $349 offering costs
 

 
 60,541
 
 2,583
 
 
 2,583
Effect of foreign currency translation and unrealized loss on investments
 

 
 
 
 
 (8) 
 (8)
Net loss
 

 
 
 
 
 
 (4,131) (4,131)
Balance, June 30, 2019
 $

 $
 312,352
 $3
 $360,638
 $(118) $(356,069) $4,454
The accompanying notes are an integral part of these interim unaudited condensed consolidated financial statements


YIELD10 BIOSCIENCE, INC.
NOTES TO THE CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
UNAUDITED

(All dollar amounts, except share and per share amounts, are stated in thousands)
1. NATURE OF BUSINESS AND BASIS OF PRESENTATION
Yield10 Bioscience, Inc. is an agricultural bioscience company whichthat uses its "Trait Factory" and the Camelina oilseed “Fast Field Testing” system to develop high value seed traits for the agriculture and food industries. Specifically, Yield10 plansThe Company's goal is to efficiently develop superior gene traits for the major grain crops including corn, soybean, canola, wheat and rice that willother crops to enable step-change increases in crop yield of at least 10-20 percent. While maintaining its focus on the developmentThe “Trait Factory” encompasses discovery of novel yield traits for key crops based on a licensing model, the Company has recently begun to execute the second part of its strategy which is to develop independent business opportunities for Yield10 in the specialty oils and niche crop spacegene targets using the oilseed Camelina. The target of this effort is sustainable business solutions to support agriculture, global food production and other specialty applications. Yield10 brings a unique history, skill set, and tools captured in its GRAIN (“Gene Ranking Artificial Intelligence Network ("GRAIN"etwork”) big data mining platform, deployment of trait gene targets in the oilseed Camelina and generation of field performance data. The “Trait Factory” enables two complementary commercial opportunities with different paths to market. The first is trait licensing to the major seed companies for developing advanced cropcorn, soybean, canola and other crops. Data from the Company's trait field testing in Camelina has enabled Yield10 to establish research license agreements with leading seed companies including Bayer, Forage Genetics and Simplot. These companies are progressing the development of Yield10 traits in soybean, forage sorghum, and increasingpotato, respectively. The second is to improve the concentrationperformance and value of specific biochemicals of commercial interest in crops. The Company's plan isCamelina as a platform to develop a sourcecommercial crop product business producing nutritional oils and PHA biomaterials. Using this approach, Yield10 can leverage the resources of revenue from funded researchthe major seed companies to efficiently develop superior gene traits for the major crops and focus internal resources on trait gene discovery and the commercial development collaborations for traits, products and crops not being directly pursued internally. While there is no guarantee of success, the Company is currently engaged in a range of discussions with third parties on different crops, traits and products in the feed, food and pharmaceutical sectors. Yield10 Bioscience is headquartered in Woburn, Massachusetts and has an oilseed development Center of Excellence in Saskatoon, Saskatchewan, Canada.Camelina products.
The accompanying unaudited condensed consolidated financial statements are presented in U.S. dollars, are unaudited, and have been prepared by Yield10 in accordance with accounting principles generally accepted in the United States of America ("GAAP") and pursuant to the rules and regulations of the U.S. Securities and Exchange Commission ("SEC"). Certain information and footnote disclosures normally included in the Company’s annual consolidated financial statements have been condensed or omitted. The year-end condensed consolidated balance sheet data was derived from audited financial statements but does not include all disclosures required by GAAP. The condensed consolidated financial statements, in the opinion of management, reflect all adjustments (consisting only of normal recurring adjustments) necessary for fair statements of the financial position and results of operations for the interim periods ended June 30, 20192020 and June 30, 2018. The Company adopted Accounting Standards Update ("ASU") No. 2016-02, Leases, ("Topic 842") on January 1, 2019 using a modified retrospective approach. As a result, the Company's unaudited condensed consolidated balance sheet at December 31, 2018 and its unaudited condensed consolidated statements of operations, comprehensive loss, cash flows and stockholders' equity for the three and six months ended June 30, 2018, included herein, have been adjusted to incorporate the guidance of Topic 842. See Note 8.2019.
The results of operations for the interim periods are not necessarily indicative of the results of operations to be expected for any future period or the entire fiscal year. These interim unaudited condensed consolidated financial statements should be read in conjunction with the audited consolidated financial statements for the year ended December 31, 2018,2019, which are contained in the Company’s Annual Report on Form 10-K filed with the SEC on March 28, 2019.25, 2020.
The accompanying condensed consolidated financial statements have been prepared on a basis which assumes that the Company will continue as a going concern and which contemplates the realization of assets and satisfaction of liabilities and commitments in the normal course of business. With the exception ofExcept for a single year, the Company has recorded losses since its initial founding, including the three and six months ended June 30, 2019.2020.
As of June 30, 2019,2020, the Company held unrestricted cash, cash equivalents and short-term investments of $4,250.$8,501. The Company follows the guidance of Accounting Standards Codification ("ASC") Topic 205-40, Presentation of Financial Statements-Going Concern, in order to determine whether there is substantial doubt about its ability to continue as a going concern for one year after the date its financial statements are issued. Based on its current cash forecast, management expects that the Company's present capital resources will be sufficient to fund its planned operations and meet its obligations into the fourthsecond quarter of 2019.2021. This forecast of cash resources is forward-looking information that involves risks and uncertainties, and the actual amount of expenses could vary materially and adversely as a result of a number of factors. The Company's ability to continue operations after its current cash resources are exhausted depends on its ability to obtain additional financing through, among other sources, public or private equity financing, secured or unsecured debt financing, equity or debt bridge financing, warrant holders' ability and willingness to exercise the Company's outstanding warrants, additional government grants or collaborative arrangements with third parties, as to which no assurance can be given. Management does not know whether additional financing will be available on terms favorable or acceptable to the Company when needed, if at all. If adequate additional funds are not available when required, management willmay be forced to curtail the Company's research efforts, explore strategic alternatives and/or wind down its operations and pursue options for liquidating its remaining assets, including


intellectual property. Based on its cash forecast, management has determined that the Company's present capital resources will not be sufficient to fund its planned operations for the twelve months from the date that these interim financial statements are filed, which raises substantial doubt about the Company's ability to continue as a going concern.


If the Company issues equity or debt securities to raise additional funds, (i) the Company may incur fees associated with such issuance, (ii) its existing stockholders may experience dilution from the issuance of new equity securities, (iii) the
Company may incur ongoing interest expense and be required to grant a security interest in Company assets in connection with any debt issuance, and (iv) the new equity or debt securities may have rights, preferences and privileges senior to those of the Company’s existing stockholders. In addition, utilization of the Company’s net operating loss and research and development credit carryforwards may be subject to significant annual limitations under Section 382 of the Internal Revenue Code of 1986, as amended (the "Internal Revenue Code") due to ownership changes resulting from equity financing transactions. If the Company raises additional funds through collaboration, licensing or other similar arrangements, it may be necessary to relinquish valuable rights to its potential products or proprietary technologies or grant licenses on terms that are not favorable to the Company.
2. ACCOUNTING POLICIES
From time to time, new accounting pronouncements are issued by the Financial Accounting Standards Board ("FASB") or other standard setting bodies that the Company adopts as of the specified effective date. During the six months ended June 30, 2019, the Company adopted the following new accounting guidance.
In February 2016, the FASB issued ASU No. 2016-02, which requires lessees to recognize most leases on their balance sheet as right-of-use assets and lease liabilities. In July 2018, the FASB issued ASU No. 2018-10, "Codification Improvements to Topic 842, Leases" ("ASU 2018-10"), which provided narrow amendments to clarify how to apply certain aspects of the new lease standard, and ASU No. 2018-11, "Leases (Topic 842 - Targeted Improvements)" ("ASU 2018-11"), which addressed implementation issues related to the new lease standard. The new guidance was effective for annual reporting periods beginning after December 15, 2018 and interim periods within those fiscal years. Under the new standard, disclosures are required to enable users of financial statements to better assess the amount, timing, and uncertainty of cash flows arising from leases. Topic 842 required filers to adopt the new standard using a modified retrospective approach under either of two transition methods; (1) to apply the new lease requirements at the beginning of the earliest period presented, or (2) to apply the new lease requirements at the effective date. The Company adopted the new standard on January 1, 2019 and elected to adjust its 2018 financial statements in order to make them comparable to its 2019 financial statements. Adoption of Topic 842 had a material impact on the Company's previously reported 2018 financial statements. See Note 8.
New pronouncements that are not yet effective but may impact the Company's financial statements in the future are described below.
In June 2016, the FASB issued ASU No. 2016-13, Financial Instruments - Credit Losses (Topic 326): Measurement of Credit Losses on Financial Instruments. The FASB has subsequently issued amendments to ASU 2016-13, which have the same effective date and transition date of January 1, 2020. These standards require that credit losses be reported using an expected losses model rather than the incurred losses model that is currently used, and establishes additional disclosures related to credit risks. For available-for-sale debt securities with unrealized losses, this standard now requires allowances to be recorded instead of reducing the amortized cost of the investment. These standards limit the amount of credit losses to be recognized for available-for-sale debt securities to the amount by which carrying value exceeds fair value and requires the reversal of previously recognized credit losses if fair value increases. The Company is still evaluating the potential impact of the standard on its consolidated financial position, results of operations and related disclosures.
In August 2018, the FASB issued ASU No. 2018-13, Fair Value Measurement (Topic 820): Disclosure Framework - Changes to the Disclosure Requirements for Fair Value Measurement. This standard modifies certain disclosure requirements on fair value measurements and will become effective for the Company on January 1, 2020. The Company is still evaluating the potential impact of the standard on its consolidated financial position and results of operations and related disclosures.
In November 2018, the FASB issued ASU No. 2018-18, Collaborative Arrangements (Topic 808): Clarifying the Interaction between Topic 808 and Topic 606. This standard makes targeted improvements for collaborative arrangements as follows:
Clarifies that certain transactions between collaborative arrangement participants should be accounted for as revenue under ASC 606, Revenue from Contracts with Customers, when the collaborative arrangement participant is a customer in the context of a unit of account. In those situations, the guidance in ASC 606 should be applied, including recognition, measurement, presentation and disclosure requirements;


Adds unit-of-account guidance to ASC 808, Collaborative Arrangements, to align with the guidance in ASC 606 (that is, a distinct good or service) when an entity is assessing whether the collaborative arrangement or a part of the arrangement is within the scope of ASC 606; and
Precludes a company from presenting transactions with collaborative arrangement participants that are not directly related to sales to third parties with revenue recognized under ASC 606 if the collaborative arrangement participant is not a customer.
This standard will become effective for the Company on January 1, 2020; however, early adoption is permitted. A retrospective transition approach is required for either all contracts or only for contracts that are not completed at the date of initial application of ASC 606, with a cumulative adjustment to opening retained earnings, as of January 1, 2019. The Company is currently evaluating the potential impact that this standard may have on its consolidated financial position, results of operations and related disclosures.
Principles of Consolidation
The Company's unaudited condensed consolidated financial statements are prepared in accordance with accounting principles generally accepted in the United States of America. The unaudited condensed consolidated financial statements include the accounts of the Company and its wholly owned subsidiaries. All intercompany transactions were eliminated, including transactions with its Canadian subsidiary, Metabolix Oilseeds, Inc.
Reverse Stock Split
On January 15, 2020, the Company effected a 1-for-40 reverse stock split of its common stock. Unless otherwise indicated, all share amounts, per share data, share prices, and conversion rates set forth in these notes and the accompanying financial statements have, where applicable, been adjusted retroactively to reflect this reverse stock split.
Cash, Cash Equivalents and Restricted Cash
The Company considers all highly liquid investments purchased with an original maturity date of ninety days or less at the date of purchase to be cash equivalents.
The following table provides a reconciliation of cash, cash equivalents and restricted cash reported within the Company's Unaudited Condensed Consolidated Balance Sheets included herein:
June 30,
2019
 December 31,
2018
June 30,
2020
 December 31,
2019
Cash and cash equivalents$3,252
 $3,023
$3,290
 $5,417
Restricted cash332
 332
254
 332
Total cash, cash equivalents and restricted cash$3,584
 $3,355
$3,544
 $5,749
Amounts included in restricted cash represent those required to be set aside by contractual agreement. Restricted cash of $332254 at June 30, 20192020 and $332 at December 31, 20182019 consists primarily of funds held in connection with the Company's lease agreement for its Woburn, Massachusetts facility.
Investments
The Company considers all investments purchased with an original maturity date of more than ninety days at the date of purchase and a maturity date of one year or less at the balance sheet date to be short-term investments. All other investments are classified as long-term. The Company held no long-term investments at June 30, 2019 and December 31, 2018.
Other-than-temporary impairments of equity investments are recognized in the Company's statements of operations if the Company has experienced a credit loss and has the intent to sell the investment or if it is more likely than not that the Company will be required to sell the investment before recovery of the amortized cost basis. Realized gains and losses, dividends, interest income and declines in value judged to be other-than-temporary credit losses are included in other income (expense). Any premium or discount arising at purchase is amortized and/or accreted to interest income.


Use of Estimates
The preparation of financial statements in conformity with GAAP requires management to make estimates and assumptions that affect the reported amounts of assets and liabilities and the disclosure of contingent assets and liabilities at the date of the financial statements and the reported amounts of grant revenue and expenses during the reporting periods. Actual results could differ from those estimates.


Foreign Currency Translation
Foreign denominated assets and liabilities of the Company's wholly owned foreign subsidiaries are translated into U.S. dollars at the prevailing exchange rates in effect on the balance sheet date. Revenues and expenses are translated at average exchange rates prevailing during the period. Any resulting translation gains or losses are recorded in accumulated other comprehensive income (loss) in the consolidated balance sheet. When the Company dissolves, sells or substantially sells all of the assets of a consolidated foreign subsidiary, the cumulative translation gain or loss of that subsidiary is released from comprehensive income (loss) and included within its consolidated statement of operations during the fiscal period when the dissolution or sale occurs.
Comprehensive Income (Loss)
Comprehensive income (loss) is comprised of net income (loss) and certain changes in stockholders' equity that are excluded from net income (loss). The Company includes unrealized gains and losses on debt securities and foreign currency translation adjustments in other comprehensive income (loss).
Income Taxes
The Company accounts for income taxes using the asset and liability method, which requires the recognition of deferred tax assets and liabilities for the expected future tax consequences of events that have been recognized in the consolidated financial statements or in the Company's tax returns. Under this method, deferred tax assets and liabilities are determined based on the difference between the financial statement and tax basis of assets and liabilities using enacted tax rates in effect for the year in which the differences are expected to reverse. A valuation allowance is provided to reduce the deferred tax asset to a level which, more likely than not, will be realized.
Concentration of Credit Risk
Financial instruments that potentially subject the Company to concentrations of credit risk primarily consist of cash, cash equivalents and investments. The Company has historically invested its cash equivalents in highly rated money market funds, corporate debt, federal agency notes and U.S. treasury notes. Investments, when purchased, are acquired in accordance with the Company’s investment policy which establishes a concentration limit per issuer.
At June 30, 2019,2020, 100% of the Company's total accounts and unbilled receivables of $251 are due from U.S. and Canadian government grants.

Fair Value Measurements
The carrying amounts of the Company's financial instruments as of June 30, 2020 and December 31, 2019, which include cash equivalents, accounts receivable, unbilled receivables, accounts payable, and accrued expenses, approximate their fair values due to the short-term nature of these instruments. See Note 5 for further discussion on fair value measurements.
Segment Information
The accounting guidance for segment reporting establishes standards for reporting information on operating segments in financial statements. The Company is an agricultural bioscience company operating in one segment, which is the development of new technologies to enable step-change increases in crop yield to enhance global food security and production of specialty oils and niche crops.  The Company's chief operating decision-maker does not manage any part of the Company separately, and the allocation of resources and assessment of performance are based on the Company's consolidated operating results.


Property and Equipment
Property and equipment are stated at cost less accumulated depreciation. Repairs and maintenance are charged to operating expense as incurred. Depreciation is computed using the straight-line method over the estimated useful lives of the assets once they are placed in service as follows:
Asset DescriptionEstimated Useful Life (years)
Equipment3
Furniture and fixtures5
Software3
Leasehold improvementsShorter of useful life or term of lease
Right-of-Use Assets
The Company’s right-of-use assets consist of leased assets recognized in accordance with ASC 842, Leases, ("ASC 842")which requires lessees to recognize a lease liability and a corresponding lease asset for long-term lease contracts. Right-of-use assets represent the Company’s right to use an underlying asset for the lease term and lease liabilities represent its obligation to make lease payments arising from the lease, both of which are recognized based on the present value of the future minimum lease payments over the lease term at the commencement date. The Company uses its incremental borrowing rate in calculating the present value of future lease payments when interest rates are not implicit in the lease. Leases with terms of 12 months or less at inception are expensed as costs are incurred and not capitalized under ASC 842.
Impairment of Long-Lived Assets
Long-lived assets, such as property and equipment, are reviewed for impairment whenever events or changes in circumstances indicate that the carrying amount of an asset may not be recoverable. Accounting guidance further requires that companies recognize an impairment loss only if the carrying amount of a long-lived asset is not recoverable based on its undiscounted future cash flows and measure an impairment loss as the difference between the carrying amount and fair value of the asset.
Grant Revenue
The Company's source of continuing revenue is from its government research grants, in which it serves as either the primary contractor or as a subcontractor. These grants are considered an ongoing major and central operation of the Company's business. Revenue is earned as research expenses related to the grants are incurred. Revenue earned on government grants, but not yet invoiced as of the balance sheet date, are recorded as unbilled receivables in the accompanying consolidated balance sheets at June 30, 2020 and December 31, 2019. Funds received from government grants in advance of work being performed, if any, are recorded as deferred revenue until earned.
Research and Development
All costs associated with internal research and development are expensed as incurred. Research and development expenses include, among others, direct costs for salaries, employee benefits, subcontractors, product trials, facility related expenses, depreciation, and stock-based compensation. Costs incurred in connection with government research grants are recorded as research and development expenses.
General and Administrative Expenses
The Company's general and administrative expense includes costs for salaries, employee benefits, facilities expenses, consulting and professional service fees, travel expenses, depreciation expenses and office related expenses incurred to support the administrative operations of the Company.
Intellectual Property Costs
The Company includes all costs associated with the prosecution and maintenance of patents within general and administrative expenses in the consolidated statement of operations.


Stock-Based Compensation
All share-based payments to employees, members of the Board of Directors and non-employees are recognized within operating expense based on the straight-line recognition of their grant date fair value over the period during which the recipient is required to provide service in exchange for the award. See Note 7 for a description of the types of stock-based awards granted, the compensation expense related to such awards and detail of equity-based awards outstanding.
Recent Accounting Standards
From time to time, new accounting pronouncements are issued by the Financial Accounting Standards Board ("FASB") or other standard setting bodies that the Company adopts as of the specified effective date. During the six months ended June 30, 2020, the Company adopted the following new accounting guidance.
In August 2018, the FASB issued ASU No. 2018-13, Fair Value Measurement (Topic 820): Disclosure Framework - Changes to the Disclosure Requirements for Fair Value Measurement. This standard modifies certain disclosure requirements on fair value measurements. This standard became effective for the Company on January 1, 2020 and did not have a material impact on its disclosures.
In November 2018, the FASB issued ASU No. 2018-18, Collaborative Arrangements (Topic 808): Clarifying the Interaction between Topic 808 and Topic 606. This standard makes targeted improvements for collaborative arrangements as follows:
Clarifies that certain transactions between collaborative arrangement participants should be accounted for as revenue under ASC 606, Revenue from Contracts with Customers, when the collaborative arrangement participant is a customer in the context of a unit of account. In those situations, the guidance in ASC 606 should be applied, including recognition, measurement, presentation and disclosure requirements;
Adds unit-of-account guidance to ASC 808, Collaborative Arrangements, to align with the guidance in ASC 606 (that is, a distinct good or service) when an entity is assessing whether the collaborative arrangement or a part of the arrangement is within the scope of ASC 606; and
Precludes a company from presenting transactions with collaborative arrangement participants that are not directly related to sales to third parties with revenue recognized under ASC 606 if the collaborative arrangement participant is not a customer.
This standard became effective on January 1, 2020. However, since the Company is not currently participating in any collaborative arrangements, the new standard does not impact its financial statements.
The following new pronouncement is not yet effective but may impact the Company's financial statements in the future.
In June 2016, the FASB issued ASU No. 2016-13, Financial Instruments-Credit Losses (Topic 326): Measurement of Credit Losses on Financial Instruments, which requires the measurement and recognition of expected credit losses for financial assets held at amortized cost.  It also eliminates the concept of other-than-temporary impairment and requires credit losses related to available-for-sale debt securities to be recorded through an allowance for credit losses rather than as a reduction in the amortized cost basis of the securities. These changes will result in more timely recognition of credit losses. The guidance is effective for fiscal years beginning after December 15, 2022 for SEC filers that are eligible to be smaller reporting companies under the SEC’s definition, and interim periods within those fiscal years. The Company is currently evaluating the impact this guidance will have on the Company’s condensed consolidated financial statements.
3. BASIC AND DILUTED NET INCOME (LOSS) PER SHARE
Basic net income (loss) per share is computed by dividing net income (loss) by the weighted-average number of common shares outstanding. Diluted net income (loss) per share is computed by dividing net income (loss) by the weighted-average number of dilutive common shares outstanding during the period. Diluted shares outstanding is calculated by adding to the weighted shares outstanding any potential (unissued) shares of common stock from outstanding stock options and warrants based on the treasury stock method, as well as weighted shares outstanding of any potential (unissued) shares of common stock from restricted stock units. In periods when a net loss is reported, all common stock equivalents are excluded from the calculation because they would have an anti-dilutive effect, meaning the loss per share would be reduced. Therefore, in periods when a loss is reported, basic and dilutive loss per share are the same. Common stock equivalents include stock options, restricted stock awards and warrants.


The number of shares of potentially dilutive common stock presented on a weighted average basis, related to options, restricted stock units and warrants (prior to consideration of the treasury stock method) that were excluded from the calculation of dilutive shares since the inclusion of such shares would be anti-dilutive for the three and six months ended June 30, 20192020 and June 30, 2018,2019, respectively, are shown below. Issued and outstanding warrants shown in the table below are described in greater detail in Note 11,12, contained herein.
Three Months Ended
June 30,
 Six Months Ended
   June 30,
Three Months Ended
June 30,
Six Months Ended
   June 30,
2019 2018 2019 20182020 20192020 2019
Options2,027,870
 1,117,827
 1,874,968
 910,427
162,822
 50,707
115,427
 46,883
Restricted stock units
 7,101
 3,531
 10,660
Restricted Stock Awards17,000
 
13,170
 85
Series A Convertible Preferred Stock12,166
 
25,613
 
Series B Convertible Preferred Stock
 
63,187
 
Warrants7,368,254
 10,597,486
 7,400,490
 10,597,486
2,843,699
 175,995
2,843,699
 175,995
Total9,396,124
 11,722,414
 9,278,989
 11,518,573
3,035,687
 226,702
3,061,096
 222,963
4. INVESTMENTS
Investments consist of the following:


following at June 30, 2020 and December 31, 2019:
Accumulated Cost Unrealized Market ValueAccumulated Cost at June 30, 2020 Unrealized Market Value at June 30, 2020
June 30, 2019 Gain (Loss) 
Accumulated Cost at June 30, 2020 Gain (Loss) Market Value at June 30, 2020
Short-term investments            
Government securities$998
 $
 $
 $998
$5,204
 $7
 $
 $5,211
Total$998
 $
 $
 $998
$5,204
 $7
 $
 $5,211
Accumulated Cost Unrealized Market ValueAccumulated Cost at December 31, 2019 Unrealized Market Value at December 31, 2019
December 31, 2018 Gain (Loss) 
Accumulated Cost at December 31, 2019 Gain (Loss) Market Value at December 31, 2019
Short-term investments            
Government securities$2,746
 $
 $
 $2,746
$5,700
 $
 $
 $5,700
Total$2,746
 $
 $
 $2,746
$5,700
 $
 $
 $5,700
There wereAll short-term investments are classified as available for sale as of June 30, 2020 and December 31, 2019. The Company held no long-term investments at June 30, 2019,2020, and December 31, 2018.2019.
5. FAIR VALUE MEASUREMENTS
The Company has certain financial assets recorded at fair value which have been classified as either Level 1 orand Level 2 within the fair value hierarchy as described in the accounting standards for fair value measurements. In addition, during November 2019, the Company issued Series A Warrants and Series B Warrants in two concurrent securities offerings. At the time of issuance, the Company determined that all of the Series A Warrants and Series B Warrants should be classified as a warrant liability in accordance with ASC 480, Distinguishing Liabilities from Equity, and recognized at fair value due to the insufficiency of common shares available to permit their exercise. At December 31, 2019, the warrant liability met Level 3 classification criteria for classification within the fair value hierarchy. Fair value is the price that would be received from the sale of an asset or the price paid to transfer a liability in an orderly transaction between independent market participants at the measurement date. Fair values determined by Level 1 inputs utilize observable data such as quoted prices in active markets.markets for identical instruments. Fair values determined by Level 2 inputs utilize data points other than quoted prices in active markets that are observable either directly or indirectly. Fair values determined by Level 3 inputs utilize unobservable data points in which there is little or no market data, which require the reporting entity to develop its own assumptions. The fair value hierarchy level is determined by the lowest level of significant input.  At June 30, 2019 and December 31, 2018, the Company did not own any Level 3 financial assets.
The Company’s financial assets classified as Level 2 at June 30, 20192020 and December 31, 2018,2019 were initially valued at the transaction price and subsequently valued utilizing third-party pricing services. Because the Company’s investment


portfolio may include securities that do not always trade on a daily, basis, the pricing services use many observable market inputs to determine value including reportable trades, benchmark yields and benchmarking of like securities. The Company validates the prices provided by the third-party pricing services by reviewing their pricing methods and obtaining market values from other pricing sources. After completing the validation procedures, the Company did not adjust or override any fair value measurements provided by these pricing services as of June 30, 20192020 and December 31, 2018.2019.
The $14,977 fair value of the Series A and Series B Warrant liability at December 31, 2019 was determined using the Black-Scholes valuation model. The expected volatility and the risk free discount rate used in the Black-Scholes model were determined based on the Company's historical market price published on the Nasdaq Capital Market and from published U.S. Treasury yield curves, respectively, for a period matched to the contractual term of each warrant series.
At December 31, 2019Series A Warrants Series B Warrants
Fair market value of common stock (per share)$6.86 $6.86
Expected term (years)2.3 7.3
Risk free rate1.62% 1.83%
Volatility127% 115%
On January 15, 2020, the Company filed an amendment to its Certificate of Incorporation with the State of Delaware to effect a 1-for-40 reverse stock split. As a result of the reverse stock split, the Company's number of authorized but unissued shares of Common Stock increased significantly and the Series A Warrants and Series B Warrants issued under the offerings completed in November 2019 became eligible for exercise. Prior to reclassification as equity, the Company adjusted the warrant liability to its $15,934 fair value using the assumptions below, recording a loss on the adjustment to fair value of $957 during the six months ended June 30, 2020.
At January 15, 2020Series A Warrants Series B Warrants
Fair market value of common stock (per share)$3.77 $3.77
Expected term (years)2.3 7.3
Risk free rate1.62% 1.83%
Volatility127% 115%
The tables below present information about the Company’s assets and liabilities that are measured at fair value on a recurring basis as of June 30, 20192020 and December 31, 20182019 and indicate the fair value hierarchy of the valuation techniques utilized to determine such fair value.
Fair value measurements at reporting date using  Fair value measurements at reporting date using  
Quoted prices in active markets for identical
assets
 
Significant other
observable inputs
 
Significant
unobservable  inputs
 Balance as of
Quoted prices in active markets for  identical
assets
 
Significant other
observable inputs
 
Significant
unobservable  inputs
 Balance as of
Description(Level 1) (Level 2) (Level 3) June 30, 2019(Level 1) (Level 2) (Level 3) June 30, 2020
Assets       
Cash equivalents:              
Money market funds$2,371
 $
 $
 $2,371
$2,438
 $
 $
 $2,438
Short-term investments:              
U.S. government and agency securities
 998
 
 998

 5,211
 
 5,211
Total$2,371
 $998
 $
 $3,369
Total assets$2,438
 $5,211
 $
 $7,649



Fair value measurements at reporting date using  Fair value measurements at reporting date using  
Quoted prices in active markets for  identical
assets
 
Significant other
observable inputs
 
Significant
unobservable  inputs
 Balance as of
Quoted prices in active markets for  identical
assets
 
Significant other
observable inputs
 
Significant
unobservable  inputs
 Balance as of
Description(Level 1) (Level 2) (Level 3) December 31, 2018(Level 1) (Level 2) (Level 3) December 31, 2019
Assets       
Cash equivalents:              
Money market funds$2,663
 $
 $
 $2,663
$2,622
 $
 $
 $2,622
U.S. government and agency securities
 1,750
 
 1,750
Short-term investments:              
U.S. government agency securities
 2,746
 
 2,746
Total$2,663
 $2,746
 $
 $5,409
U.S. government and agency securities
 5,700
 
 5,700
Total assets$2,622
 $7,450
 $
 $10,072
       
Liabilities       
Warrant liability$
 $
 $14,977
 $14,977
Total liabilities$
 $
 $14,977
 $14,977
There were no transfers of financial assets or liabilities between category levels for the three and six months ended June 30, 2020 and the three and six months ended June 30, 2019.
The Company owns 648,149 shares of Series A Redeemable Convertible Preferred Stock of Tepha, Inc. ("Tepha"), a privately held medical device company located in Lexington, Massachusetts, that is engaged in the development of medical device products that restore, maintain, or improve tissue function. The Company received the preferred shares from Tepha during 2002 in connection with a technology sublicense agreement that was later terminated during 2016. The preferred shares owned by the Company represent less than one percent of Tepha's current outstanding common shares on a fully diluted basis and were fully written off through an impairment charge during 2005 prior to Tepha initiating commercial product sales.
6. ACCRUED EXPENSES
Accrued expenses consisted of the following at:
June 30,
2019
 December 31,
2018
June 30,
2020
 December 31,
2019
Employee compensation and benefits$217
 $98
$517
 $669
Leased facilities36
 50
54
 51
Professional services169
 234
151
 327
Other164
 298
160
 279
Total accrued expenses$586
 $680
$882
 $1,326
7. STOCK-BASED COMPENSATION
Expense Information for Employee and Non-Employee Stock Awards
The Company recognized stock-based compensation expense related to stock awards, including awards to non-employees and members of the Board of Directors of $160 and $297 for the three and six months ended June 30, 2020 and $113 and $275 for the three and six months ended June 30, 2019. During the three and six months ended June 30, 2018, the Company recognized $315 and $596 of stock-based compensation expense,2019, respectively. At June 30, 2019,2020, there was approximately $1,461$2,356 of pre-tax stock-based compensation expense related to unvested awards not yet recognized.
The compensation expense related to unvested stock options is expected to be recognized over a remaining weighted average period of 3.353.62 years.


Stock Options
A summary of option activity for the six months ended June 30, 20192020 is as follows:
Number of
Shares
 
Weighted Average
Exercise Price
Number of
Shares
 
Weighted Average
Exercise Price
Outstanding at December 31, 20181,745,037
 $6.38
Outstanding at December 31, 201962,065
 $178.95
Granted710,275
 $0.91
261,992
 $5.91
Exercised
 

 $
Forfeited(7,500) $1.43
(721) $48.40
Expired(1,730) $287.80
(615) $2,318.91
Outstanding at June 30, 20192,446,082
 $4.61
Outstanding at June 30, 2020322,721
 $34.68
      
Options vested and expected to vest at June 30, 20192,446,082
 $4.61
Options exercisable at June 30, 20191,037,393
 $9.12
Vested and expected to vest at June 30, 2020322,721
 $34.68
Options exercisable at June 30, 202046,233
 $183.33
       
Restricted Stock Units
The Company records stock compensation expense for restricted stock units ("RSUs") on a straight-line basis over their requisite service period, which approximates the vesting period, based on each RSU's award date market value. As RSUs vest, the Company withholds a number of shares from its employees with an aggregate fair market value equal to the minimum tax withholding amount (unless the employee makes other arrangements for payment of the tax withholding) from the common stock issuable at the vest date. The Company then pays the minimum required income tax for the employees. During the six months ended June 30, 20192020 and June 30, 2018,2019, the Company paid $4$0 and $6, respectively,$4 for income tax withholdings associated with RSUs during these periods.RSUs.
A summary of RSU activity for the six months ended June 30, 20192020 is as follows:
Number of RSUsWeighted Average Remaining Contractual Life (years)
Outstanding at December 31, 20187,101
Awarded
Common stock issued upon vesting(7,101)
Forfeited
Outstanding at June 30, 2019

As of June 30, 2019, the Company had no remaining unvested RSUs outstanding.
 Number of RSUsWeighted Average Remaining Contractual Life (years)
Outstanding at December 31, 2019
 
Awarded17,000
 
Common stock issued upon vesting
 
Forfeited
 
Outstanding at June 30, 202017,000
0.62
8. LEASES
New Lease Accounting
Topic 842 is effective for annual reporting periods beginning after December 15, 2018 and for interim periods within those fiscal years. The Company adopted Topic 842 on January 1, 2019 and elected to applyfollows the new lease accounting requirementsguidance codified in ASC 842. Under ASC 842, a lease is classified as a finance lease if any of five criteria described in the guidance apply to its financial statements beginningthe lease. Any lease not classified as a finance lease is classified as an operating lease with expense recognition occurring on January 1, 2018 (the earliest period presented in its comparative financial statements), using a modified retrospective approach.straight-line basis over the term of the lease. The new guidance also requires additional financial statement disclosures to enable users of financial statements to better assessCompany's existing lease arrangements meet the amount, timing, and uncertainty of cash flows arising from leases. Topicstandards for operating lease classification.
Under ASC 842, replaced the previous lease accounting and reporting guidance of ASC Topic 840, Leases, ("ASC Topic 840") and requires lessees to reflect a right-of-use asset and a lease liability is recorded on their balance sheet for leases with termsthe commencement date of more than twelve months.


The Company's enactment of Topic 842, effective on January 1, 2019, resulted in it recording right-of-use assets and lease liabilities for real estate and equipment leases of $4,766 and $6,465, respectively, as of that date. The Company also eliminated $1,005 in lease incentive obligations from its balance sheet on January 1, 2019 as a result of the discontinuation of the previous guidance under ASC Topic 840. Application of the new pronouncement to the Company's 2018 comparative year had a material effect on its previously issued 2018 financial statements. The Company's condensed consolidated balance sheet as of December 31, 2018 and its condensed consolidated statements of operations, comprehensive income (loss), cash flows and stockholders' equity for the three and six months ended June 30, 2018, included herein, have been adjusted to incorporate the guidance of Topic 842.
Under Topic 842, leases are classified as either operating or finance leases, with classification based on criteria similar to previous lease accounting guidance, but without the explicit quantitative determining factors used to establish a lease as either a capital or an operating lease. The Company reviewed its 2018 transitional leases and its currently active leases falling within the scope of Topic 842 and determined that all of these leases met the criteria for classification as operating leases.
Lease liabilities are recorded as of their commencement date and areis calculated as the present value of the remaining lease payments, using the interest rate implicit in the lease, or if that rate is not readily determinable, using the lessee's incremental borrowing rate. Right-of-use assets areA right-of-use asset equal to the lease liability is also recorded with adjustments made, as necessary, for lease prepayments, lease accruals, initial direct costs and lessor lease incentives and any lease impairments that may be present. Topic 842 further requires that lease expense for operating leases be calculated on a straight-line basis and reported as a single operating expensepresent within income from operations.
Topic 842 provides a numberthe terms of transitional practical expedients designed to assist lessees with initial implementation.the lease. The Company madehas adopted the following elections in applying Topic 842.
Short-termshort-term lease exception. Activeexception that permits lessees to omit leases as of January 1, 2018, and new leases entered into thereafter with terms of twelve months or less were and will be excluded from the accounting under Topicrequirements of ASC 842.
Package of practical expedients. These expedients, which must be elected in their entirety, permit a company to continue its historical accounting during the transition period for contractual arrangements containing embedded leases in lieu of performing a re-evaluation of the agreements in order to separate lease and non-lease components. The package of expedients also permit a company to maintain its previous accounting classification for transitional leases as either operating or finance leases without reassessment under the new guidance. Lastly, the package of practical expedients does not require reassessment and capitalization of initial direct costs incurred to establish a lease.

In applying the guidance of Topic 842 to the 2018 transition period, the Company did not elect the available hindsight expedient with respect to the determination of lease terms used in the calculation of lease liabilities and right-of-use assets by considering the actual outcome of lease renewals.
Maturity Analysis of Lease Liabilities
At June 30, 2019,2020, the Company's lease liabilities will mature as follows:
Year ended December 31,Undiscounted Cash FlowsUndiscounted Cash Flows
2019 (July to December)$637
20201,080
2020 (July to December)$346
2021939
704
2022969
726
2023998
749
2024771
Thereafter3,082
1,540
Total undiscounted future lease payments7,705
4,836
Discount(1,644)(1,006)
Total lease liabilities$6,061
$3,830
Short-term lease liabilities$865
Long-term lease liabilities$5,196
Short-term lease liability$430
Long-term lease liability$3,400


At June 30, 2019, real estate and equipment leases represent approximately 99% and 1%, of2020, the Woburn, Massachusetts facility is the only remaining lease included in the Company's right-of-use assets and corresponding lease liabilities, respectively.liabilities.
Quantitative Disclosure of Lease Costs (unaudited)
 Three Months Ended
   June 30,
 Six Months Ended
   June 30,
 2019 2018 2019 2018
Lease cost:       
Operating lease cost$257
 $272
 $516
 $538
Short-term lease cost108
 139
 254
 257
Sublease income(134) (113) (258) (232)
Total lease cost, net$231
 $298
 $512
 $563
        
Other information as of:    June 30, 2019 December 31, 2018
Weighted-average remaining lease term (years)    7.1 7.4
Weighted-average discount rate    6.75% 6.75%
Impact of Topic 842 Adoption on Reported Results
Adoption of the new lease standard impacted the Company's 2018 previously reported financial statements as follows (unaudited):
 Three Months Ended June 30, 2018
 As Reported New Lease Standard Adjustment As Adjusted
Condensed Consolidated Statements of Income:     
Revenue$285
 $
 $285
Expenses2,705
 11
 2,716
Other Income (expense)30
 8
 38
Net loss(2,390) (3) (2,393)
Basic and diluted net loss per share(0.24) 
 (0.24)
 Six Months Ended June 30, 2018
 As Reported New Lease Standard Adjustment As Adjusted
Condensed Consolidated Statements of Income:     
Revenue$345
 $
 $345
Expenses5,072
 21
 5,093
Other Income (expense)47
 16
 63
Net loss(4,680) (5) (4,685)
Basic and diluted net loss per share(0.48) 
 (0.48)


 June 30, 2018
 As Reported New Lease Standard Adjustment As Adjusted
Condensed Consolidated Balance Sheet:     
Current assets$10,104
 $
 $10,104
Restricted cash332
 
 332
Property and equipment, net1,477
 
 1,477
Right-of-use assets
 5,209
 5,209
Other assets98
 
 98
Total assets$12,011
 $5,209
 $17,220
      
Liabilities and Stockholders' Equity:     
Accounts payable$34
 $
 $34
Accrued expenses1,455
 (584) 871
Short-term lease liabilities
 739
 739
Lease incentive obligation, net of current portion941
 (941) 
Long-term lease liabilities
 6,000
 6,000
Stockholders' equity9,581
 (5) 9,576
Total liabilities and stockholders' equity$12,011
 $5,209
 $17,220
 December 31, 2018
 As Reported New Lease Standard Adjustment As Adjusted
Condensed Consolidated Balance Sheet:     
Current assets$6,377
 $
 $6,377
Restricted cash332
 
 332
Property and equipment, net1,385
 
 1,385
Right-of-use assets
 4,766
 4,766
Other assets100
 
 100
Total assets$8,194
 $4,766
 $12,960
      
Liabilities and Stockholders' Equity:     
Accounts payable$117
 $
 $117
Accrued expenses1,429
 (749) 680
Short-term lease liabilities
 844
 844
Lease incentive obligation, net of current portion935
 (935) 
Long-term lease liabilities
 5,621
 5,621
Stockholders' equity5,713
 (15) 5,698
Total liabilities and stockholders' equity$8,194
 $4,766
 $12,960


 Three Months Ended
   June 30,
 Six Months Ended
  June 30,
 2020 2019 2020 2019
Lease cost:       
Operating lease cost$183
 $257
 $386
 $516
Short-term lease cost123
 108
 306
 254
Sublease income(142) (134) (279) (258)
Total lease cost, net$164
 $231
 $413
 $512
        
Other information as of:    June 30, 2020 December 31, 2019
Weighted-average remaining lease term (years)    6.4 6.7
Weighted-average discount rate    7.25% 7.24%
Real Estate Leases
During 2016, the Company entered into a lease agreement for its headquarters, pursuant to which the Company leasesleased approximately 29,622 square feet of office and research and development space located at 19 Presidential Way, Woburn, Massachusetts. The lease began on June 1, 2016 and will end on November 30, 2026. The lease agreement does not include any options for thean early termination or thefor an extension of the lease. The Company provided the landlord with a security deposit in the form of a letter of credit in the amount of $307. Pursuant to the lease, the Company will alsois required to pay certain taxes and operating costs associated with the premises throughout the term of the lease. During the buildout of the rented space, the landlord paid $889 for tenant improvements to the facility and an additional $444 for tenant improvements that result in increased rental payments by the Company. Upon the adoption of Topicadopting ASC 842 these improvements were recorded as a reduction in the valulationvaluation of the right-of-use asset.
In November 2019, the Company entered into a modification agreement to the Woburn lease in which Yield10 returned 7,409 square feet of underutilized space to the landlord for the remaining term of the lease. In exchange for returning the space, the landlord agreed to fund modifications and upgrades to the office space retained by the Company. The modifications were completed in February 2020, and after that point the Company has no further financial obligations for the vacated space, including lease rental charges, utilities, maintenance and real estate tax charges. The Company's security deposit was also reduced from $307 to $229. During the six months ending June 30, 2020, the Company wrote off $206 in leasehold improvements and office furniture, net of proceeds, associated with the returned space.


In October 2016, the Company entered into a sublease agreement with a subsidiary of CJ CheilJedang Corporation ("CJ") with respect to CJ's sublease of approximately 9,874 square feet of its leased facility located in Woburn, Massachusetts. The sublease space was determined to be in excess of the Company's needs. The CJ sublease is unaffected by the Company's recent lease modification with the landlord and it remains coterminous with the Company's master lease, andlease. CJ will pay pro rata rent and operating expenses equal to approximately one-third of the amounts payable to the landlord by the Company, as adjusted from time to time in accordance with the terms of the master lease. Future CJ sublease payments have not been presented as an offset to total undiscounted future lease payments of $7,705$4,836 shown in the lease maturity analysis table above. CJ provided the Company with a security deposit of $103 in the form of an irrevocable letter of credit.
TheThrough May 2020, the Company also leasesleased approximately 13,702 square feet of unused office and laboratory space at 650 Suffolk Street,in Lowell, Massachusetts. The lease for this facility, as amended, expiresterminated in May 2020. Theaccordance with the terms of the lease agreement provide the Company with a five-year option to extend the lease provided written notice is given prior to August 31, 2019. The Company does not intend to elect this option. During July 2018, the Company discontinued further use of the Lowell space, and as a result, the Company recorded a non-cash lease exit charge of $255 for the facility in accordance with ASC Topic 420-10, Exit or Disposal Obligations. The exit charge was recorded as an increase in the Company's lease expense and a reductionhas been returned to the associated right-of-use asset. The Company will continue to make monthly rental payments for the Lowell facility through its expiration in May 2020.landlord. No further expenses are anticipated under this lease.
The Company's wholly-owned subsidiary, Metabolix Oilseeds, Inc. ("MOI"), located in Saskatoon, Saskatchewan, Canada, leases approximately 6,2006,900 square feet of office, laboratory and greenhouse space located within Innovation Place at 410 Downey Road and within the research facility of National Research Council Canada located at 110 Gymnasium Place. None of the leases contain renewal or early termination options. MOI's leases for these facilities expire on various dates through May 2020.2021.
9. CARES ACT LOAN
The Coronavirus Aid, Relief, and Economic Security Act (“CARES Act”) was enacted on March 27, 2020 and subsequently amended by the Paycheck Protection Program Flexibility Act (the "Flexibility Act") on June 5, 2020, in order to provide relief from the economic impacts of COVID-19. During April 2020, the Company received $333 in loan proceeds from the Paycheck Protection Program (the “PPP”), established pursuant to the CARES Act and administered by the U.S. Small Business Administration. The unsecured loan (the “PPP Loan”) is evidenced by a promissory note of the Company dated April 19, 2020 in the principal amount of $333, issued to a third-party lender (the "lender"). The PPP Loan was amended as a result of the changes made by the Flexibility Act.
Under the CARES Act and the PPP, the Company may apply for and be granted forgiveness for all or part of the PPP Loan. The amount of loan proceeds eligible for forgiveness is based on a formula that takes into account a number of factors, including the amount of loan proceeds used by the Company during the twenty-four-week period after the loan origination for certain purposes including payroll costs, rent payments on certain leases, and certain qualified utility payments. At least 60% of the loan amount must be used for eligible payroll costs; maintaining or rehiring employees and maintaining salaries at certain levels; and other factors.
Under the terms of the PPP Loan, as amended, interest will accrue on the outstanding principal at the rate of 1.0% per annum. The term of the PPP Loan is two years from the date the loan proceeds were received, though it may be payable sooner in connection with an event of default under the terms of the PPP Loan. To the extent the loan amount is not forgiven under the PPP, the Company is obligated to make equal monthly payments of principal and interest, beginning ten months from the date of the PPP Loan, until the maturity date.
The PPP Loan may be prepaid in part or in full, at any time, without penalty. The PPP Loan provides for certain customary events of default, including, but not limited to, failing to make a payment when due under the loan, failure to take actions required by the loan, the Company defaulting under certain agreements in favor of any third party, making false statements, the Company’s insolvency, and the commencement of creditor or forfeiture proceedings against the Company. Upon the occurrence of an event of default, the lender has customary remedies and may, among other things, require immediate payment of all amounts owed under the PPP Loan, collect all amounts owed from the Company, and file suit and obtain judgment against the Company.
During the three months ended June 30, 2020, Yield10 utilized the entire PPP Loan amount for qualifying expenses and management of the Company considers it reasonably certain that it will meet the conditions for loan forgiveness. As such, the Company has recorded the full amount of the loan, or $333, within other income (expense) in its condensed consolidated statement of operations for the three months ended June 30, 2020.


10. COMMITMENTS AND CONTINGENCIES
Litigation
From time to time, the Company may be subject to legal proceedings and claims in the ordinary course of business. The Company is not currently aware of any such proceedings or claims that it believes will have, individually or in the aggregate, a material adverse effect on its business, financial condition or results of operations.
Guarantees
As of June 30, 20192020, and December 31, 2018,2019, the Company did not have significant liabilities recorded for guarantees.
The Company enters into indemnification provisions under various agreements with other companies in the ordinary course of business, typically with business partners and contractors. Under these provisions, the Company generally indemnifies and holds harmless the indemnified party for losses suffered or incurred by the indemnified party as a result of its activities. These indemnification provisions generally survive termination of the underlying agreement. The maximum potential amount of future payments the Company could be required to make under these indemnification provisions is unlimited. However, to date Yield10 Bioscience has not incurred material costs to defend lawsuits or settle claims related to these indemnification provisions. As a result, the estimated fair value of the indemnifications under these agreements is believed to be minimal. Accordingly, the Company has no liabilities recorded for these agreements as of June 30, 20192020 and December 31, 2018.2019.


10.11. GEOGRAPHIC INFORMATION
The geographic distribution of the Company’s grant revenues and long-lived assets are summarized in the tables below:
U.S. Canada Eliminations Total
Three Months Ended June 30, 2020:       
Grant revenue from external customers$154
 $67
 $
 $221
Inter-geographic revenues
 373
 (373) 
Revenues$154
 $440
 $(373) $221
U.S. Canada Eliminations Total       
Three Months Ended June 30, 2019:              
Grant revenue from external customers$318
 $
 $
 $318
$318
 $
 $
 $318
Inter-geographic revenues
 499
 (499) 

 499
 (499) 
Revenues$318
 $499
 $(499) $318
$318
 $499
 $(499) $318
              
Three Months Ended June 30, 2018:       
Grant revenue from external customers$285
 $
 $
 $285
Six Months Ended June 30, 2020:       
Net revenues from external customers$333
 $67
 $
 $400
Inter-geographic revenues
 372
 (372) 

 777
 (777) 
Revenues$285
 $372
 $(372) $285
Net revenues$333
 $844
 $(777) $400
              
Six Months Ended June 30, 2019:              
Net revenues from external customers$442
 $
 $
 $442
$442
 $
 $
 $442
Inter-geographic revenues
 836
 (836) 

 836
 (836) 
Net revenues$442
 $836
 $(836) $442
$442
 $836
 $(836) $442
       
Six Months Ended June 30, 2018:       
Net revenues from external customers$345
 $
 $
 $345
Inter-geographic revenues
 640
 (640) 
Net revenues$345
 $640
 $(640) $345

Foreign revenue is based on the country in which the Company’s subsidiary that earned the revenue is domiciled. During the three and six months ended June 30, 2019, the Company's grant revenue from the Michigan State University ("MSU") sub-award of $318 and $442 represented 100% of total revenue for both periods. During the three and six months ended June 30, 2018,2020, revenue earned from the MSUCompany's Michigan State University sub-award totaled $236 for both periodsrepresented 69.7% and represented 83% and 68%83.3%, respectively, of total government grant revenue respectively.for each period.
The geographic distribution of the Company’s long-lived assets is summarized as follows:
 U.S. Canada Eliminations Total
June 30, 2019$1,276
 $22
 $
 $1,298
December 31, 2018$1,372
 $13
 $
 $1,385
 U.S. Canada Eliminations Total
June 30, 2020$932
 $46
 $
 $978
December 31, 2019$1,186
 $57
 $
 $1,243


11.12. CAPITAL STOCK AND WARRANTS

Common Stock
Shelf Registration
On April 1, 2020, the Company filed a shelf registration statement on Form S-3 (File No. 333-237539) with the SEC, which was declared effective on April 10, 2020 (the “Shelf Registration Statement”). The Shelf Registration Statement contained a prospectus which covers the offering, issuance and sale by the Company of up to a maximum aggregate offering price of $25.0 million of the Company's common stock, preferred stock, warrants and subscription rights, which securities may be sold either individually or in units.
Reverse Stock Split
On January 15, 2020, the Company completed a 1-for-40 reverse stock split ("Reverse Stock Split") of its common stock by filing a certificate of amendment (the "Charter Amendment") with the State of Delaware to amend its certificate of incorporation. The ratio for the Reverse Stock Split was determined by the Company's board of directors following approval by stockholders at the Company's special meeting held on January 9, 2020. The Reverse Stock Split had the effect of increasing the Company's common shares available for issuance by reducing issued and outstanding common shares by a divisible factor of 40 while its authorized shares remained at the current 60 million shares. Proportional adjustments were made to the Company's outstanding stock options and to the number of shares issued and issuable under the Company's equity compensation plans.
November 2019 Concurrent Securities Offerings
On November 19, 2019, the Company closed on concurrent public and private securities offerings, receiving combined gross cash proceeds of $11,500, before issuance costs of $1,254.
The public portion of the offering included sales of Class A Units and Class B Units as follows:
405,750 Class A Units priced at a public offering price of $8.00 per unit, with each unit consisting of one share of common stock, par value $0.01 per share, Series A Warrants to purchase one share of common stock at an exercise price of $8.00 per share, expiring two and one-half-years from the closing date of the offering, and Series B Warrants to purchase one share of common stock at an exercise price of $8.00 per share, expiring seven and one-half-years from the closing date of the offering. The 405,750 Class A Units sold include the full exercise of the underwriter's over-allotment option of 93,750 Class A Units.
2,504 Class B Units, priced at a public offering price of $1,000 per unit, with each unit consisting of one share of Series A Convertible Preferred Stock, par value $0.01 per share, convertible at any time at the holder's option into 125 shares of common stock, par value $0.01 per share, Series A Warrants to purchase 125 shares of common stock at an exercise price of $8.00 per share, expiring two and one-half-years from the closing date of the offering, and Series B Warrants to purchase 125 shares of common stock at an exercise price of $8.00 per share, expiring seven and one-half-years from the closing date of the offering. The Series A Convertible Preferred Stock was convertible into shares of common stock at any time using a conversion ratio of $8.00 per share. As of June 30, 2020, all of the shares of the Series A Convertible Preferred Stock had converted to 313,000 shares of the Company's common stock.
Gross proceeds from the sale of Class A Units and Class B Units totaled $5,750.
In the concurrent private placement, certain existing shareholders purchased the following securities:
5,750 Units, priced at $1,000 per unit, each unit consisting of one share of the Company's Series B Convertible Preferred Stock, par value $0.01 per share, contingently convertible into 125 shares of common stock at an exercise price of $8.00, Series A Warrants to purchase 125 shares of common stock, par value $0.01 per share, at an exercise price of $8.00 per share, expiring two and one-half-years from the closing date of the offering, and Series B Warrants to purchase 125 shares of common stock at an exercise price of $8.00 per share, expiring seven and one-half-years from the closing date of the offering.
Gross proceeds from the private placement also totaled $5,750.


As of the November 19, 2019 closing date of the two offerings, the Company did not have sufficient authorized and available shares of common stock to permit conversion of the Series B Convertible Preferred Stock sold in the private placement or to permit the exercise of the 2,875,000 combined Series A Warrants and Series B Warrants issued under both the public and the private offerings. The Series B Convertible Preferred Shares and the Series A Warrants and Series B Warrants were not convertible or exercisable until more shares of common stock became available for issuance through the Company's filing of the Charter Amendment for the Reverse Stock Split. Upon the filing of the Charter Amendment on January 15, 2020, all of the Series B Convertible Preferred Stock sold in the private placement automatically converted into 718,750 shares of common stock and the Series A Warrants and Series B Warrants issued under both offerings became eligible for exercise.
Until their conversion to common stock, the Company recorded the Series A Convertible Preferred Stock as permanent equity within the Company's balance sheet. The contingent redemption rights of the Series B Convertible Preferred stockholders were judged to be outside of the Company's control and resulted in their classification as temporary equity within the Company's balance sheet until their automatic conversion to common shares in January 2020.
The Series A and Series B Warrants are free standing financial instruments, legally detachable and separately exercisable from the common and preferred shares issued in the concurrent offerings. At the time of their issuance, the Company determined that all of the warrants should be classified as a warrant liability and recorded at an inception date fair value of $24,518 due to the insufficiency of common shares available to permit their exercise. As the proceeds from the offerings were less than the fair value of their respective warrants, the warrants were recorded at their full fair value and the difference between the fair value and the cash proceeds of $13,018 was recorded to other income (expense) in the Company's consolidated statement of operations during the year ended December 31, 2019. No residual offering proceeds remained to be allocated to the common and preferred shares sold in the offerings.
The Company re-measured the fair value of the warrants on December 31, 2019 and again on January 15, 2020 (the date of filing the Charter Amendment to increase available shares of common stock), resulting in, respectively, the recognition of a gain of $9,541 followed by a loss of $957, due to the change in fair value at each valuation date. By filing the Charter Amendment and enacting the 1-for-40 Reverse Stock Split, the Company's outstanding common shares were reduced by a divisible factor of 40 while authorized common shares remained at the current 60 million shares. As a result of this corporate action, sufficient shares of authorized, but unissued shares of common stock became available for Series A and Series B warrant holders to exercise their warrants resulting in their reclassification from warrant liability to equity in the Company's consolidated balance sheet.
At closing, the proceeds of the combined offerings were allocated solely to the liability classified warrants, and as a consequence, the offering costs of $1,254 were immediately expensed to other income (expense) in the consolidated statement of operations for the year ended December 31, 2019 in accordance with accounting guidance.
March 2019 Registered Direct Offering
On March 18, 2019, the Company completed a registered direct offering of its common stock. Proceeds from the transaction were approximately $2,932 before issuance costs of $349. Investors participating in the transaction purchased a total of 2,421,66260,541 shares of common stock at a price of $1.2101$48.40 per share.
Preferred Stock
The Company's Certificate of Incorporation authorizes it to issue up to 5,000,000 shares of $0.01 par value preferred stock.
In December 2017,Description of Series A Convertible Preferred Stock
The November 2019 concurrent offerings of the Company closed on a public offering of itsCompany's securities that included the issuance of 3,9872,504 shares of Series A Convertible Preferred Stock. Each preferred shareSeries A Convertible Preferred Share was convertible at the holder's option, into 445125 shares of common stock at a conversion price of $2.25$8.00 per share. As of March 19, 2018,June 30, 2020, all 2,504 shares of the 3,987 preferred sharesSeries A Convertible Preferred Stock had been converted to an aggregate of 1,772,000313,000 shares of common stock.
Description of Series B Convertible Preferred Stock
The November 2019 concurrent offerings of the Company's securities included the issuance of 5,750 shares of Series B Convertible Preferred Stock. Each share of Series B Convertible Preferred Stock was convertible into 125 shares of common stock at a conversion price of $8.00 per share. All of the Series B Convertible Preferred Stock automatically converted to 718,750 shares of common stock on January 15, 2020, upon the Company's filing of a Charter Amendment for the reverse stock split described above.


When converted, the shares of converted Series A and B Convertible Preferred Stock were restored to the status of authorized but unissued shares of preferred stock, subject to reissuance by the BoardCompany's board of Directors.


directors.
Warrants
The following table summarizes information with regard toregarding outstanding warrants to purchase common stock as of June 30, 2019:2020:
Issuance Number of Shares Issuable Upon Exercise of Outstanding Warrants Exercise Price Expiration Date Number of Shares Issuable Upon Exercise of Outstanding Warrants Exercise Price Per Share of Common Stock Expiration Date
November 2019 Public Offering - Series A 580,727
 $8.00
 May 19, 2022
November 2019 Public Offering - Series B 649,477
 $8.00
 May 19, 2027
November 2019 Private Placement - Series A 718,750
 $8.00
 May 19, 2022
November 2019 Private Placement - Series B 718,750
 $8.00
 May 19, 2027
December 2017 Public Offering - Series A 160,975
 $90.00
 December 21, 2022
July 2017 Registered Direct Offering 570,784
 $5.04
 January 7, 2024 14,270
 $201.60
 January 7, 2024
December 2017 Public Offering - Series A 6,439,000
 $2.25
 December 21, 2022
Consultant 30,000
 $2.90
 September 11, 2024 750
 $116.00
 September 11, 2024
Total 7,039,784
    2,843,699
   
On June 15, 2019, 393,300 warrants issued inFebruary 2020 Warrant Exercises
In connection with the Company’s public securities offering that closed on November 19, 2019, the Company issued Series A Warrants and Series B Warrants to purchase shares of the Company’s common stock. The warrants were issued, and are held, in book-entry form through The Depository Trust & Clearing Corporation (“DTCC”). During the six months ended June 30, 2020, warrants equal to a total of 207,296 shares of the Company's private placementcommon stock were exercised, generating cash proceeds of $1,658. In May 2020, Yield10 was informed by DTCC and its warrant agent that the exercise price of each warrant issued in the November 2019 public securities on June 15, 2015, expiredoffering had been proportionately adjusted in accordance with the termsCompany's 1-for-40 reverse stock split completed in January 2020, but that the number of shares issuable upon the exercise of each warrant had not been proportionately adjusted following the stock split within the records of DTCC. Based on DTCC's notification, the Company believed that up to 88,762 shares of common stock may have been incorrectly issued and up to $710 in proceeds may have been incorrectly collected for certain warrants exercised during February 2020. Following a thorough review with the warrant agent, DTCC and brokers for certain warrant holders who exercised these warrants, the Company determined that the number of shares of common stock issued and the amount of cash collected from the exercises were in fact correct, but that DTCC’s records did not accurately reflect the number of warrants remaining in the affected warrant holders’ accounts following their exercises. As of June 30, 2020, the issue has been resolved by adjusting the DTCC accounts of the securities purchase agreement.warrant holders. Accordingly, the Company will not be required to return cash proceeds and the warrant holders will not be required to return any of the common shares issued from the exercises.  In its Quarterly Report on Form 10-Q for the quarter ended March 31, 2020, the Company recorded $710 within accrued expenses for the cash proceeds from the February 2020 warrant exercises that the Company previously expected to be returned to warrant holders. That accrual was relieved and reclassified to equity during the quarter ending June 30, 2020.
Reserved Shares
The following shares of common stock were reserved for future issuance upon exercise of stock options, vesting of RSUs and conversion of warrants:
June 30,
2019
 December 31,
2018
June 30,
2020
 December 31,
2019
Stock Options2,446,082
 1,745,037
322,721
 62,065
RSUs
 7,101
17,000
 
Series A Convertible Preferred Stock - November 2019 Public Offering
 99,500
Warrants7,039,784
 7,433,084
2,843,699
 175,995
Total number of common shares reserved for future issuance9,485,866
 9,185,222
3,183,420
 337,560


ITEM 2.  MANAGEMENT’S DISCUSSION AND ANALYSIS OF FINANCIAL CONDITION AND RESULTS OF OPERATIONS.

(All dollar amounts are stated in thousands)
Forward LookingForward-Looking Statements
This Quarterly Report on Form 10-Q contains “forward-looking statements” within the meaning of Section 27A of the Securities Act of 1933, as amended (the "Securities Act"), as amended, and Section 21E of the Securities Exchange Act of 1934, as amended (the "Exchange Act"). These statements relate to our future plans, objectives, expectations and intentions and may be identified by words such as “may,” “will,” “should,” “expects,” “plans,” “anticipate,” “intends,” “target,” “projects,” “contemplates,” “believe,” “estimates,” “predicts,” “potential,” and “continue,” or similar words.
Although we believe that our expectations are based on reasonable assumptions within the limits of our knowledge of our business and operations, these forward-looking statements contained in this document are neither promises nor guarantees. Our business is subject to significant risk and uncertainties and there can be no assurance that our actual results will not differ materially from our expectations. These forward looking statements include, but are not limited to, statements concerning our business plans and strategies; expected future financial results and cash requirements; statements related to the coronavirus pandemic and its potential adverse impacts; plans for obtaining additional funding; plans and expectations that depend on our ability to continue as a going concern; and plans for development and commercialization of our Yield10 technologies. Such forward-looking statements are subject to a number of risks and uncertainties that could cause actual results to differ materially from those anticipated including, without limitation, risks related to our limited cash resources, uncertainty about our ability to secure additional funding, risks related to the execution of our business plans and strategies, risks associated with the protection and enforcement of our intellectual property rights, as well as other risks and uncertainties set forth under the caption "Risk Factors" in Part I, Item 1A, of the Company's Annual Report on Form 10-K for the year ended December 31, 20182019 and in our other filings with the SEC.


SEC, including in Part II, Item 1A of this Report on Form 10-Q.
The forward-looking statements and risk factors presented in this document are made only as of the date hereof and we do not intend to update any of these risk factors or to publicly announce the results of any revisions to any of our forward-looking statements other than as required under the federal securities laws.
Unless the context otherwise requires, all references in this Quarterly Report on Form 10-Q to "Yield10 Bioscience," "Yield10," "we," "our," "us," "our company" or "the company" refer to Yield10 Bioscience, Inc., a Delaware corporation, and its subsidiaries.
Overview
Yield10 Bioscience, Inc. is an agricultural bioscience company whichthat uses its "Trait Factory" and the Camelina oilseed “Fast Field Testing” system to develop high value seed traits for the agriculture and food industries. Specifically, Yield10 plansOur goal is to efficiently develop superior gene traits for the major grain crops including corn, soybean, canola, wheat and rice that willother crops to enable step-change increases in crop yield of at least 10-20 percent. While maintaining our focus on the developmentOur “Trait Factory” encompasses discovery of novel yield traits for key crops based on a licensing model, we have recently begun to execute the second part of our strategy which is to develop independent business opportunities for Yield10 in the specialty oils and niche crop spacegene targets using the oilseed Camelina. The target of this effort is sustainable business solutions to support agriculture, global food production and other specialty applications. Yield10 brings a unique history, skill set, and tools captured in our Gene Ranking Artificial Intelligence Network ("GRAIN") big data mining platform, deployment of trait gene targets in the oilseed Camelina and generation of field performance data. The “Trait Factory” enables two complementary commercial opportunities with different paths to market. The first is trait licensing to the major seed companies for developing advanced cropcorn, soybean, canola and other crops. Data from our trait field testing in Camelina has enabled Yield10 to establish research license agreements with leading seed companies. These companies are progressing the development of Yield10 traits in soybean, forage sorghum, and increasingpotato, respectively. The second commercial opportunity is to improve the concentrationperformance and value of specific biochemicals of commercial interest in crops. Our plan isCamelina as a platform to develop a sourcecommercial crop product business producing nutritional oils and PHA biomaterials. Using this approach, Yield10 can leverage the resources of revenue from funded researchthe major seed companies to efficiently develop superior gene traits for the major crops and focus internal resources on trait gene discovery and the commercial development collaborations for traits, products and crops not being directly pursued internally. While there is no guarantee of success, the Company is currently engaged in a range of discussions with third parties on different crops, traits and products in the feed, food and pharmaceutical sectors.Camelina products. Yield10 Bioscience is headquartered in Woburn, Massachusetts and has an oilseed developmentOilseed Center of Excellence in Saskatoon, Saskatchewan, Canada.
As of June 30, 2019, the Company2020, we held unrestricted cash, cash equivalents and short-term investments of $4,250.$8,501. We follow the guidance of ASU 2014-15,ASC Topic 205-40, Presentation of Financial Statements-Going Concern, (Subtopic 205-40) in order to determine whether there is substantial doubt about the Company'sour ability to continue as a going concern for one year after the date itsour financial statements are filed.issued. Based on our current cash forecast, we expect that our present capital resources will be sufficient to fund our planned operations and meet our obligations into the second quarter of 2021. Our ability to continue operations after our current cash resources are exhausted depends on our ability to obtain additional financing through, among other sources, public or private equity financing, secured or unsecured debt financing, equity or debt bridge financing, additional government research grants or collaborative arrangements with third parties, as to which no assurances can be given. We do not know whether additional


financing will be available on terms favorable or acceptable to us when needed, if at all. If adequate additional funds are not available when required, we may be forced to curtail our research efforts, explore strategic alternatives and/or wind down our operations and pursue options for liquidating our remaining assets, including intellectual property and equipment. We have determined, based on our cash forecast, that our present capital resources will not be sufficient to fund our planned operations for the twelve months from the date that these interim financial statements are filed, which raises substantial doubt about our ability to continue as a going concern.
If we issue equity or debt securities to raise additional funds in the future, (i) we may incur fees associated with such issuance,issuances, (ii) our existing stockholders may experience dilution from the issuance of new equity securities, (iii) we may incur ongoing interest expense and be required to grant a security interest in Companyour assets in connection with any debt issuance, and (iv) the new equity or debt securities may have rights, preferences and privileges senior to those of our existing stockholders. In addition, utilization of the Company’sour net operating loss and research and development credit carryforwards may be subject to significant annual limitations under Section 382 of the Internal Revenue Code due to ownership changes resulting from equity financing transactions. If we raise additional funds through collaboration, licensing or other similar arrangements, it may be necessary to relinquish valuable rights to the Company'sour potential products or proprietary technologies or grant licenses on terms that are not favorable to the Company.us.
Government Grants
On May 20, 2020, Metabolix Oilseeds, Inc. (“MOI”), the Company’s wholly-owned Canadian research subsidiary, received a research grant through the Industrial Research Assistance Program administered by National Research Council Canada ("NRC"). The objective of the grant is to provide financial research assistance to innovative, early-stage small and medium-sized enterprises. Under the terms of the agreement, NRC agreed to contribute up to a maximum of $67 for payroll costs incurred by MOI during the period April 1, 2020 - June 24, 2020. During the three months ended June 30, 2020, MOI submitted claims for eligible payroll costs and recognized revenue for the full amount of the award.
During 2018, we entered into a sub-award with Michigan State University ("MSU") to support a Department of Energy ("DOE") funded grant entitled "A Systems Approach to Increasing Carbon Flux to Seed Oil." Our participation under this projected five-year grant will be awarded on an annual basis with the first year commencing September 15, 2017. Although our funding under this sub-award has been appropriated through September 20192020 for $1,212,$1,698, we anticipate that each additional option year will be awarded annually to Yield10 through September 14, 2022 for total sub-award funding of $2,957, provided the U.S. Congress continues to appropriate funds for the program, we are able to make progress towards meeting grant objectives and we remain in compliance with other terms and conditions of the sub-award.
As of June 30, 2019,2020, proceeds of $351$140 remain to be recognized through the end of the third year under our MSU sub-award as shown in the table below. This includes amounts for reimbursement to our subcontractors, as well as reimbursement for our employees’ time, benefits and other expenses related to future performance.
 Program Title 
Funding
Agency
 Total Government Funded Appropriations Total revenue recognized through June 30, 2019 Remaining amount to be recognized as of June 30, 2019 
Contract/Grant
Expiration
 
 Subcontract from Michigan State University project funded by DOE entitled "A Systems Approach to Increasing Carbon Flux to Seed Oil" Department of Energy $1,212
��$861
 $351
 September 2019
 Program Title 
Funding
Agency
 Total Government Funded Appropriations Total revenue recognized through June 30, 2020 Remaining amount to be recognized as of June 30, 2020 
Contract/Grant
Expiration
 
 Subcontract from Michigan State University project funded by DOE entitled "A Systems Approach to Increasing Carbon Flux to Seed Oil" Department of Energy $1,698
 $1,558
 $140
 September 2020
 Funding from National Research Council Canada through its Industrial Research Assistance Program (NRC-IRAP) entitled "Innovation Assistance Program" National Research Council Canada 67
 67
 
 June 2020
 Total   $1,765
 $1,625
 $140
  


Critical Accounting Estimates and Judgments
The discussion and analysis of our financial condition and results of operations are based upon our consolidated financial statements, which have been prepared in accordance with accounting principles generally accepted in the United States of America GAAP for interim financial information. The preparation of these financial statements requires us to make estimates and judgments that affect the reported amounts of assets, liabilities, revenues and expenses, and related disclosure of contingent assets and liabilities. On an ongoing basis, we evaluate our estimates, including those related to revenue recognition, stock-based and performance-based compensation, measurement of right-of-use assets and lease liabilities, and the recognition of lease expense.expense and income taxes. We base our estimates on historical experience and on various other assumptions that we believe to be reasonable under the circumstances, the results of which form the basis for making judgments about the carrying value of assets and liabilities that are not readily apparent from other sources. Actual results may differ from these estimates. With the exception of our accounting for operating leases under the new guidance of Topic 842, Leases, that became effective for us on January 1, 2019, theThe critical accounting policies and the significant judgments and estimates used in the preparation of our condensed consolidated financial statements for the three and six months ended June 30, 2019,2020, are consistent with those discussed in our Annual Report on Form 10-K for the year ended December 31, 2018,2019, in the section captioned “Management’s Discussion and Analysis of Financial Condition and Results of Operations—Critical Accounting Estimates and Judgments.”
Results of Operations
Comparison of the Three Months Ended June 30, 20192020 and 20182019
Revenue 
 Three Months Ended
June 30,
  
 2019 2018 Change
Grant revenue$318
 $285
 $33
 Three Months Ended
June 30,
  
 2020 2019 Change
Grant revenue$221
 $318
 $(97)
Grant revenue was $318$221 and $285$318 for the three months ended June 30, 20192020 and June 30, 2018,2019, respectively.  Grant revenue for the three months ended June 30, 2019recorded during each of these periods was derived solelyprimarily from the Company's sub-award with MSU. During the three months ended June 30, 2018, $236 was earned from2020, we also recognized the MSU sub-award with the remainder being earned from our Camelina grant with the DOE that completed in 2018.full $67 awarded by NRC to MOI for general research support.
We anticipate that MSU grant revenue recognized duringwill fluctuate over the remaindernext twelve months as a result of 2019varying annual budget appropriations awarded under the MSU sub-award. Our forecast related to grant revenue is subject to change, should we receive new grants or if our ability to earn revenue from our DOE sub-award with MSU will remain consistent withexisting grant is negatively impacted by the level of grant revenue recognized during 2018. COVID-19 pandemic.
Expenses
Three Months Ended
June 30,
  Three Months Ended
June 30,
  
2019 2018 Change2020 2019 Change
Research and development expenses$1,191
 $1,260
 $(69)$1,179
 $1,191
 $(12)
General and administrative expenses1,025
 1,456
 (431)1,179
 1,025
 154
Total expenses$2,216
 $2,716
 $(500)$2,358
 $2,216
 $142
Research and Development Expenses
ResearchTotal research and development expenseexpenses remained consistent at $1,179 and $1,191 during the three months ended June 30, 20192020 and June 30, 2018 were $1,191 and $1,260,2019, respectively. The five-percent decrease of $69 is primarily due to lower facility costs of $62 that resulted from an impairment charge taken on our Lowell, Massachusetts lease in August 2018 that reduced remaining ongoing lease expense for that facility until its conclusion in May 2020. NetHowever, compensation and benefit expense also decreasedbenefits increased by $39$92 from $681 during the three months ended June 30, 2018 to $642 during the three months ended June 30, 2019 and isto $733 during the three months ended June 30, 2020, primarily as a result of reductionsannual merit increases that became effective on January 1, 2020, and the Company's pro rata accrual for 2020 estimated performance bonuses expected to be paid in stock compensation and bonus expense of $73 and $42, respectively, partially offset by an increase in employee payroll of $72 from the addition of headcount.early 2021. We did not accrue for 2019 employee bonuses during the quarterthree months ended June 30, 2019. Facilities related expenses decreased by $82 during the three months ended June 30, 2020 compared to the three months ended June 30, 2019. In November 2019, we amended our Woburn lease and returned 7,409 square feet of underutilized space to the landlord for the remaining term of the lease.
Based on our current financial forecasts,forecast, we expect research and development expenses will continue to remain consistent during 2019 will increase over expenses incurred during 2018 asthe remainder of 2020. Due to the COVID-19 pandemic, we add additionalhave delayed a small number of planned 2020 increases in research staff and shift greater resources towards our research programs, provided that we are able to raise additional funds to support our ongoing operations.personnel. Our forecasts related to research and development expensesexpense are subject to significant change as events and opportunities occur during 2019 that coulddue to the


result in modifications topotential impact of the COVID-19 pandemic, or as new collaborative opportunities arise that alter our business plans.

General and Administrative Expenses
General and administrative expenses for the three months ended June 30, 20192020 and June 30, 2018 decreased2019 increased by $431$154 from $1,456$1,025 to $1,025.$1,179. The change15 percent increase is partiallyprimarily due to a decreasean increase in net compensation and benefits of $194$83 and an increase in professional fees of $70. Compensation and benefits increased as a result of lower stock compensation2020 annual merit increases and the recording of pro rata estimated 2020 bonus expenses. The Companyexpenses and professional fees increased due to legal and accounting work performed in connection with the Company's securities registration filings with the SEC. We did not accrue for 2019 employee bonuses during the three months ended June 30, 2019. Professional fees decreased by $120 during the three months ended June 30, 2019 as a result of lower legal, audit and patent processing charges. License fees also decreased by $71 during the three months ended June 30, 2019 and is due to
We expect our entering into an exclusive technology license with the University of Missouri during the second quarter of 2018. Facility expense also decreased by $58 as a result of the impairment charge taken on the Lowell facility during August 2018.
Based on our current financial forecasts, we expect general and administrative expenses during 2019for the year ended December 31, 2020, will remain below 2018 expenses, primarily asat a result of lower stock compensation expense, and providedlevel consistent with 2019. Note, however, that we are able to raise additional funds to support our ongoing operations. Our forecasts related to general and administrative expensesexpense are subject to significant change due to the potential impact of the COVID-19 pandemic, or as events andnew collaborative opportunities occur during 2019arise that could result in modifications toalter our business plans.
Other Income (Expense), Net 
 Three Months Ended
June 30,
  
 2019 2018 Change
Total other income (expense), net$27
 $38
 $(11)
 Three Months Ended
June 30,
  
 2020 2019 Change
Loan forgiveness income$333
 $
 $333
Other income (expense), net15
 27
 (12)
Total other income (expense), net$348
 $27
 $321
OtherLoan Forgiveness Income
During April 2020, we received $333 in loan proceeds from the Paycheck Protection Program (the “PPP”), established pursuant to the CARES Act. Under the CARES Act and the PPP, we may apply for and be granted forgiveness for all or part of the PPP loan. Subject to certain requirements and limitations on loan forgiveness, only loan proceeds spent on payroll and other eligible costs during a twenty-four-week period will qualify for forgiveness. During the three months ended June 30, 2020, we utilized the entire PPP loan amount for qualifying expenses and consider it reasonably certain that we will meet the conditions for loan forgiveness. As such, we have recorded the full amount of the loan, or $333, within other income (expense), net, was $27 and $38 in our condensed consolidated statement of operations for the three months ended June 30, 20192020. See Note 9.
Other Income (Expense), net
Other income (expense) for the three months ended June 30, 2020 and June 30, 2018, respectively. Net other income during each period2019 was derived primarily derived from investment income earned from the Company's cash equivalents and short-term investments.
Comparison of the Six Months Ended June 30, 20192020 and 20182019
Revenue 
 Six Months Ended
   June 30,
  
 2019 2018 Change
Grant revenue$442
 $345
 $97
 Six Months Ended June 30,  
 2020 2019 Change
Grant revenue$400
 $442
 $(42)
Grant revenue was $442$400 and $345$442 for the six months ended June 30, 20192020 and June 30, 2018,2019, respectively.  Grant revenue for the six months ended June 30, 2019each of these periods was derived solelyprimarily from the Company's sub-award with MSU. During the six months ended June 30, 2018, $236 was earned from2020, we also recognized the MSU sub-award with the remainder earned from our Camelina grant with the DOE that completed in 2018.full $67 awarded by NRC to MOI for general research support.


Expenses
Six Months Ended
   June 30,
  Six Months Ended June 30,  
2019 2018 Change2020 2019 Change
Research and development expenses$2,414
 $2,361
 $53
$2,639
 $2,414
 $225
General and administrative expenses2,211
 2,732
 (521)2,566
 2,211
 355
Total expenses$4,625
 $5,093
 $(468)$5,205
 $4,625
 $580
Research and Development Expenses
Research and development expenses for the six months ended June 30, 2019 and six months ended June 30, 2018 remained consistent with a $53, or 2% net increase between the two periods. No individual expense categories within research and development showed a notable variance.


General and Administrative Expenses
General and administrative expenses decreased by $521 from $2,732 during the six months ended June 30, 2018 to $2,211 during the six months ended2020 and June 30, 2019.2019 were $2,639 and $2,414, respectively. The 19% decrease was$225, or 9 percent, increase is primarily due to a net decrease$192 increase in compensation and benefits and our recording a decrease in professional feesloss on disposal of $356 and $155, respectively. The favorable variance in net compensationfixed assets. Compensation and benefits is primarily the result of lower stock compensation and bonus expenses. Stock compensation expense decreasedincreased from $1,323 during the six months ended June 30, 2019 due to $1,515 during the final vestingsix months ended June 30, 2020, as a result of annual merit increases that became effective on January 1, 2020, and expense recognitionas a result of the Company's pro rata six-month accrual for a significant number of employee stock options that completed vesting during October 2018. No2020 estimated performance bonuses were accruedexpected to be paid in early 2021. We did not accrue for 2019 employee bonuses during the six months ended June 30, 2019. In November 2019, we entered into a modification agreement to our Woburn lease in contrastwhich we returned 7,409 square feet of underutilized space to the landlord for the remaining term of the lease. As a result of this lease modification, during the six months ended June 30, 2018 when2020 we wrote off $141 in leasehold improvements and office furniture previously utilized in our research and development activities. Our facilities expenses decreased by $70 during the Company recorded a six-month proportional accrual for 2018 employee bonuses. Professional fees decreased duringsix months ended June 30, 2020, compared to the six months ended June 30, 2019, as a result of lowerreturning the underutilized space in our Woburn facility to the landlord.
General and Administrative Expenses
General and administrative expenses for the six months ended June 30, 2020 and June 30, 2019 increased by $355 from $2,211 to $2,566. The 16 percent increase is due to an increase in compensation and benefits of $140 as a result of 2020 annual merit increases and recording estimated bonus expenses. We did not accrue for 2019 employee bonuses during the six months ended June 30, 2019. Professional fees also increased by $210 from $372 during the six months ended June 30, 2019 to $581 during the six months ended June 30, 2020 and is primarily related to legal audit and patent processing charges.accounting work performed in connection with our securities registration filings with the SEC.
Other Income (Expense), Net 
 Six Months Ended
   June 30,
  
 2019 2018 Change
Total other income (expense), net$52
 $63
 $(11)
 Six Months Ended June 30,  
 2020 2019 Change
Change in fair value of warrants$(957) $
 $(957)
Loan forgiveness income333
 
 $333
Other income (expense), net48
 52
 (4)
Total other income (expense), net$(576) $52
 $(628)
Other income (expense), net,Change in Fair Value of Warrants
On November 19, 2019, we closed on concurrent securities offerings that included a total of 2,875,000 warrants that received liability classification on their date of issuance. In accordance with applicable accounting guidance, the fair value of the warrants was $52recalculated as of the Company's December 31, 2019 fiscal year-end balance sheet date and $63again on January 15, 2020, in connection with the Company's filing of a Charter Amendment to effect a 1-for-40 reverse stock split. The reverse stock split increased the number of shares of common stock available for eachissuance resulting in reclassification of the warrants from a liability to equity. During the six months ended June 30, 20192020, we recorded a loss from the change in fair value of the warrants of $957 as a result of the January 2020 revaluation. See Note 12 - Capital Stock and Warrants, in the accompanying condensed consolidated financial statements.
Loan Forgiveness Income
During the six months ended June 30, 2020, we utilized the entire PPP loan amount for qualifying expenses and consider it reasonably certain that we will meet the conditions for loan forgiveness. As such, we have recorded the full amount


of the loan, or $333, within other income (expense) in our condensed consolidated statement of operations for the six months ended June 30, 2020.
Other Income (Expense), net
Other income (expense) for the three months ended June 30, 2020 and June 30, 2018, respectively. Net other income during each period2019 was derived primarily derived from investment income earned from the Company's cash equivalents and short-term investments.
Liquidity and Capital Resources
Currently, we require cash to fund our working capital needs, to purchase capital assets, to pay our operating lease obligations and other operating costs. The primary sources of our liquidity have historically included equity financings, government research grants and income earned on cash and short-term investments.
Since our inception, we have incurred significant expenses related to our research, development and commercialization efforts. With the exception ofExcept for 2012, when we recognized $38,885 of deferred revenue from a terminated joint venture, we have recorded losses since our initial founding, including the three and six months ended June 30, 2019.2020. As of June 30, 2019,2020, we had an accumulated deficit of $356,069.$370,290. Our total unrestricted cash and cash equivalents and short-term investments as of June 30, 2019,2020, were $4,250$8,501 as compared to cash, cash equivalents and short-term investments of $5,769$11,117 at December 31, 2018. As of June 30, 2019, we had no outstanding debt.
2019. Our cash and cash equivalents are held primarily for working capital purposes. As of June 30, 2019,2020, we had restricted cash of $332.$254. Restricted cash consists of $307$229 held in connection with the lease agreement for our Woburn, Massachusetts facility and $25 held in connection with our corporate credit card used for incidental purchases.program. As of June 30, 2020, we continue to have no outstanding debt.
Investments are made in accordance with our corporate investment policy, as approved by our Board of Directors. The primary objective of this policy is to preserve principal, and investments are limited to high quality corporate debt, U.S. Treasury bills and notes, money market funds, bank debt obligations, municipal debt obligations and asset-backed securities. The policy establishes maturity limits, concentration limits, and liquidity requirements. As of June 30, 2019,2020, we were in compliance with this policy.
We currently anticipateare reducing our previous guidance for anticipated cash usage during 2020 from a range of $9,000 - $9,500 to a range of cash usage during 2019$8,500 - $9,000, primarily as a result of the impact of the COVID-19 pandemic. We have delayed plans to fundhire a small number of additional research and development staff and have significantly reduced our operations.travel related expenses as well as other general expenses. We estimate that our current cash resources will be sufficient to fund operations and meet our obligations, when due, into the fourthsecond quarter of 2019.2021. This forecast of cash resources is forward-looking information that involves risks and uncertainties, and the actual amount of expenses could vary materially and adversely as a result of a number of factors. We follow the guidance of ASC Topic 205-40, Presentation of Financial Statements-Going Concern, in order to determine whether there is substantial doubt about the Company'sour ability to continue as a going concern for one year after the date our financial statements are issued. The Company'sOur ability to continue operations after itsour current cash resources are exhausted depends on itsupon our ability to obtain additional financing through, among other sources, public or private equity financing, secured or unsecured debt financing, equity or debt bridge financing, additional government research grants or collaborative arrangements with third parties, as to which no assurances can be given. We do not know whether additional financing will be available on terms favorable or acceptable to the Companyus when needed, if at all. If adequate additional funds are not available when required, we willmay be forced to curtail our research efforts, explore strategic alternatives and/or wind down our operations and pursue options for liquidating our remaining assets, including intellectual property and equipment. BasedWe have determined, based on our cash forecast, we have


determined that the Company'sour present capital resources arewill not be sufficient to fund our planned operations for a twelve-month period ending in August 2020, and therefore, raisethe twelve months from the date that these interim financial statements are filed, which raises substantial doubt about our ability to continue as a going concern.
On April 1, 2020, we filed a shelf registration statement on Form S-3 (File No. 333-237539) with the SEC, which was declared effective on April 10, 2020 (the “Shelf Registration Statement”). The Shelf Registration Statement contained a prospectus which covers the offering, issuance and sale by the Company of up to a maximum aggregate offering price of $25.0 million of our common stock, preferred stock, warrants and subscription rights, which securities may be sold either individually or in units.
The CARES Act was enacted on March 27, 2020 to provide relief from the economic impacts of COVID-19. On June 5, 2020, the Paycheck Protection Program Flexibility Act ("Flexibility Act") was signed into law amending some provisions of the CARES Act. During April 2020, we received $333 in loan proceeds from the Paycheck Protection Program, established pursuant to the CARES Act and administered by the U.S. Small Business Administration. The unsecured loan ("PPP Loan") is evidenced by a promissory note dated April 19, 2020 in the principal amount of $333, issued to a third-party lender. We may apply for and be granted forgiveness for all or part of the PPP Loan. The amount of loan proceeds eligible for forgiveness, as regulated by the CARES Act and Flexibility Act, is based on a formula that takes into account a number of factors, including


the amount of loan proceeds used by us during the 24-week period after loan origination for certain purposes including payroll costs, rent payments on certain leases, and certain qualified utility payments. At least 60% of the loan amount must be used for eligible payroll costs; maintaining or rehiring employees and maintaining salaries at certain levels; and other factors. Under the terms of the PPP Loan, interest will accrue on the outstanding principal at the rate of 1.0% per annum. The term of the PPP Loan is two years, although it may be payable sooner in connection with an event of default. To the extent the loan amount is not forgiven, we are obligated to make equal monthly payments of principal and interest, beginning ten months from the date of the PPP Loan, until the maturity date. During the three months ended June 30, 2020, we used the entire proceeds from the loan for qualifying expenses and we believe it is reasonably certain that we will receive full loan forgiveness after our application is submitted. No assurance can be provided, however, that we will obtain forgiveness of the loan in whole or in part.
If we issue equity or debt securities to raise additional funds, (i) the Companywe may incur fees associated with such issuance,issuances, (ii) our existing stockholders will experience dilution from the issuance of new equity securities, (iii) the Companywe may incur ongoing interest expense and be required to grant a security interest in Companyour assets in connection with any debt issuance, and (iv) the new equity or debt securities may have rights, preferences and privileges senior to those of our existing stockholders. In addition, utilization of our net operating loss and research and development credit carryforwards may be subject to significant annual limitations under Section 382 of the Internal Revenue Code due to ownership changes resulting from future equity financing transactions. If we raise additional funds through collaboration, licensing or other similar arrangements, it may be necessary to relinquish valuable rights to our potential products or proprietary technologies or grant licenses on terms that are not favorable to the Company.us.
Net cash used for operating activities was $4,077 during the six months ended June 30, 2019,2020 was $4,279, compared to net cash used for operating activities during the six months ended June 30, 20182019 of $4,888.$4,077. Net cash used for operations during the six months ended June 30, 20192020 primarily reflects the greater net loss of $4,131 and$5,396, cash payments made to reduce the Company's lease liabilities of $404 partially offset by non-cash expenses, including$391 and our payment of 2019 bonus compensation of $344. Non-cash charges offsetting a portion of the net loss include the loss recorded from the revaluation of the Company's warrant liability of $957, losses from the disposal of fixed assets of $206, stock-based compensation expense of $275, depreciation expense of $100, 401(k) stock matching contribution expense of $49$297, and non-cash lease expense of $299.$262. The higher net cash usage for operating activities during the six months ended June 30, 20182019 of $4,888 is$4,077 was primarily the result of the Company's greater net loss of $4,685$4,131 and paymentpayments to reduce lease liabilities of 2017 employee bonuses$404, partially offset by non-cash stock compensation of $529.$275 and non-cash lease expense of $299.
Net cash of $1,735$464 was provided by investing activities during the six months ended June 30, 20192020, primarily as a result of $2,746$999 of short-term investments reaching their maturity dates and converting to cash. The Company also purchased $998$503 of new short-term investments during the six-month period.
Net cashIn connection with our public securities offering that closed on November 19, 2019, we issued Series A Warrants and Series B Warrants to purchase shares of $2,579 was provided by financing activities duringthe Company’s common stock. The warrants were issued, and are held, in book-entry form through The Depository Trust & Clearing Corporation (“DTCC”). During the six months ended June 30, 2020, warrants equal to a total of 207,296 shares of the Company's common stock were exercised, generating cash proceeds of $1,658. In May 2020, we were informed by DTCC and our warrant agent that the exercise price of each warrant issued in the November 2019 aspublic securities offering had been proportionately adjusted in accordance with our 40:1 reverse stock split completed in January 2020, but that the number of shares issuable upon the exercise of each warrant had not been proportionately adjusted following the stock split within the records of DTCC. As a result of the Company's completion of a registered direct sale of 2,421,662DTCC's notification, we believed that up to 88,762 shares of common stock at an offering pricewere incorrectly issued and up to $710 in proceeds may have been incorrectly collected from certain warrants exercised in February 2020. Following a thorough review of $1.2101 per share. Grossthe matter and further communications with the warrant agent, DTCC and brokers for certain warrant holders who exercised warrants in February 2020, we determined that the number of shares of common stock issued and the amount of cash collected for those exercises were in fact correct, but that DTCC’s records did not accurately reflect the number of warrants remaining in the affected warrant holders’ individual accounts following their exercises. As of June 30, 2020, the issue has been resolved by adjusting the remaining numbers of warrants held by the warrant holders following their February 2020 exercises within the records of DTCC. Accordingly, we will not be required either to return cash proceeds from these exercises or to require the warrant holders to return any of the common shares issued.  In our Quarterly Report on Form 10-Q for the quarter ended March 31, 2020, we recorded $710 within accrued expenses for the portion of the cash proceeds from the sale totaled $2,932 before cash paymentFebruary 2020 warrant exercises that we previously expected to be returned to holders of offering costs of $349.warrants. That accrual was relieved and reclassified to equity during the quarter ending June 30, 2020.
Off-Balance Sheet Arrangements
As of June 30, 2019,2020, we had no off-balance sheet arrangements as defined in Item 303(a)(4) of the SEC’s Regulation S-K.


Recent Accounting Pronouncements
See Note 2, "Accounting Policies," to our condensed consolidated financial statements included in this Quarterly Report on Form 10-Q for a full description of recent accounting pronouncements.


ITEM 3.  QUANTITATIVE AND QUALITATIVE DISCLOSURES ABOUT MARKET RISK.
Not applicable.
ITEM 4.  CONTROLS AND PROCEDURES.
Evaluation of Disclosure Controls and Procedures
Our management (with the participation of our Principal Executive Officer and Principal Accounting Officer) evaluated the effectiveness of our disclosure controls and procedures (as defined in Rules 13a-15(e) and 15d-15(e) under the Exchange Act), as of June 30, 2019.2020. Disclosure controls and procedures are designed to ensure that information required to be disclosed by the Company in the reports it files or submits under the Exchange Act is recorded, processed, summarized and reported on a timely basis and that such information is accumulated and communicated to management, including the Principal Executive Officer and the Principal Accounting Officer, as appropriate, to allow timely decisions regarding disclosure. Based on this evaluation, our Principal Executive Officer and Principal Accounting Officer concluded that these disclosure controls and procedures are effective. 
Changes in Internal Control over Financial Reporting
There have been no changes in our internal control over financial reporting (as defined in Rules 13a-15(f) under the Exchange Act) during the quarter ended June 30, 20192020 that have materially affected, or are reasonably likely to materially affect, our internal control over financial reporting.



PART II — OTHER INFORMATION
ITEM 1.  LEGAL PROCEEDINGS.
From time to time, the Company may be subject to legal proceedings and claims in the ordinary course of business. The Company is not currently aware of any such proceedings or claims that it believes will have, individually or in the aggregate, a material adverse effect on the business, financial condition or the results of operations.
ITEM 1A.  RISK FACTORS.
There have been no material changes in information regarding ourto the risk factors as described in Item 1A of our Annual Report on Form 10-K for the year ended December 31, 2018, other than the updated risk factor noted below. Our business is subject to numerous risks. We caution you that the important factors annotated within our risk factors, among others, could cause our actual results to differ materially from those expressed in forward-looking statements made by us or on our behalf in filings with the SEC, press releases, communications with investors and oral statements. Any or all of our forward-looking statements in this Quarterly Report on Form 10-Q and any other public statements we make may turn out to be wrong. They can be affected by inaccurate assumptions we might make or by known or unknown risks and uncertainties. Many factors discussed in our risk factors will be important in determining future results. Consequently, no forward-looking statement can be guaranteed. Actual future results may differ materially from those anticipated in forward-looking statements. We undertake no obligation to update any forward-looking statements, whether as a result of new information, future events or otherwise, other than as required under the federal securities laws. You are advised, however, to consult any further disclosure we make in our reports2019, filed with the Securities and Exchange Commission.
If we fail to continue to meet all applicable Nasdaq Capital Market requirementsCommission, or SEC, on March 25, 2020, as amended and supplemented by the Nasdaq Stock Market determines to delistrisk factors described in our common stock, the delisting could adversely affect the market liquidity of our common stock, impair the value of your investment and harm our business.
Our common stock is currently listedQuarterly Report on the Nasdaq Capital Market. In order to maintain that listing, we must satisfy minimum financial and other requirements. On June 25, 2019, we received a notice from the Listing Qualifications Department of the Nasdaq Stock Market indicating that,Form 10-Q for the previous 30 consecutive business days, the bid price for our common stock had closed below the minimum $1.00 per share required for continued inclusion on the Nasdaq Capital Market under Nasdaq Listing Rule 5550(a)(2). The notification letter states that pursuant to Nasdaq Listing Rule 5810(c)(3)(A) the Company will be afforded 180 calendar days, or until December 23, 2019, to regain compliancequarter ended March 31, 2020, filed with the minimum bid price requirement. In order to regain compliance, shares of the Company’s common stock must maintain a minimum bid closing price of at least $1.00 per share for a minimum of ten consecutive business days. If we do not regain compliance by December 23, 2019, Nasdaq will provide written notification to us that our common stock will be delisted. At that time, we may appeal Nasdaq’s delisting determination to a Nasdaq Listing Qualifications Panel. Alternatively, we may be eligible for an additional 180 day grace period if we satisfy all of the requirements, other than the minimum bid price requirement, for listingSEC on the Nasdaq Capital Market set forth in Nasdaq Listing Rule 5505.
While we intend to engage in efforts to regain compliance, and thus maintain our listing, there can be no assurance that we will be able to regain compliance during the applicable time periods set forth above. If we fail to continue to meet all applicable Nasdaq Capital Market requirements in the future and Nasdaq determines to delist our common stock, the delisting could substantially decrease trading in our common stock and adversely affect the market liquidity of our common stock; adversely affect our ability to obtain financing on acceptable terms, if at all, for the continuation of our operations; and harm our business. Additionally, the market price of our common stock may decline further and stockholders may lose some or all of their investment. The closing bid price of our common stock on the Nasdaq Capital Market was $0.94 on July 7, 2019.May 15, 2020.
ITEM 2.  UNREGISTERED SALES OF EQUITY SECURITIES AND USE OF PROCEEDS.
Recent Sales of Unregistered Securities
On April 1, 2019,10, 2020, we issued 21,86010,114 shares of common stock to participants in the Yield10 Bioscience, Inc. 401(k) Plan as a matching contribution. The issuance of these securities is exempt from registration pursuant to Section 3(a)(2) of the Securities Act, as amended as exempted securities.


Issuer Purchases of Equity Securities
During the three months ended June 30, 2019,2020, there were no repurchases made by us or on our behalf, or by any “affiliated purchasers,” of shares of our common stock.
ITEM 3.  DEFAULTS UPON SENIOR SECURITIES.


None.
ITEM 4.  MINE SAFETY DISCLOSURES.
Not applicable.
ITEM 5.  OTHER INFORMATION.
None.
ITEM 6.  EXHIBITS.
Amended and Restated 2018 Stock Option and Incentive Plan† (filed herewith)
 Certification Pursuant to Rule 13a-14(a)/15d-14(a) of the Securities Exchange Act of 1934 of the Principal Executive Officer (filed herewith).
   
 Certification Pursuant to Rule 13a-14(a)/15d-14(a) of the Securities Exchange Act of 1934 of the Principal Financial Officer (filed herewith).
   
 Section 1350 Certification (furnished herewith).
   
101.1 The following financial information from the Yield10 Bioscience, Inc. Quarterly Report on Form 10-Q for the quarter ended June 30, 20192020 formatted in XBRL: (i) Condensed Consolidated Balance Sheets, June 30, 20192020 and December 31, 2018;2019; (ii) Condensed Consolidated Statements of Operations, Three and Six Months Ended June 30, 20192020 and 2018;2019; (iii) Condensed Consolidated Statements of Comprehensive Loss, Three and Six Months Ended June 30, 20192020 and 2018;2019; (iv) Condensed Consolidated Statements of Cash Flows, Six Months Ended June 30, 20192020 and 2018;2019; (v) Condensed Consolidated Statements of Series B Convertible Preferred Stock and Stockholders' (Deficit) Equity, Three and Six Months Ended June 30, 20192020 and 2018;2019; and (vi) Notes to Consolidated Financial Statements.
Indicates a management contract or any compensatory plan, contract or arrangement.




SIGNATURES
 
Pursuant to the requirements of the Securities Exchange Act of 1934, the Registrant has duly caused this report to be signed on its behalf by the undersigned thereunto duly authorized.
 
 YIELD10 BIOSCIENCE, INC.
  
   
August 12, 201911, 2020By:/s/ OLIVER PEOPLES
  Oliver Peoples
  President and Chief Executive Officer
  (Principal Executive Officer)
   
August 12, 201911, 2020By:/s/ CHARLES B. HAASER
  Charles B. Haaser
  Chief Accounting Officer
  (Principal Financial and Accounting Officer)

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