Exhibit 99.01 Cepheid Reports Third Quarter and Nine Months 2004 Results Nine Month Total Revenues Increase by 146% Driven by 179% Increase in Product Sales Nine Month Gross Margin Dollars on Product Sales Increase by 208% SUNNYVALE, Calif., Nov. 2 /PRNewswire-FirstCall/ -- Cepheid (Nasdaq: CPHD) today announced financial results for the quarter and nine months ended September 30, 2004. Product sales for the quarter ended September 30, 2004 increased 190% to approximately $13.4 million from approximately $4.6 million for the corresponding prior year period while product sales for the nine months period ended September 30, 2004 increased 179% to approximately $30.6 million from $11.0 million for the corresponding prior year period. The increase in product sales for both the quarter and nine months ended September 30, 2004 as compared to the corresponding prior year periods was due to a 848% and 551% increase, respectively, in reagent and disposable sales and to a 98% and 119% increase, respectively, in instrument sales. Total revenues for the quarter ended September 30, 2004 increased 162% to approximately $14.1 million compared to approximately $5.4 million for the corresponding prior year period, while total revenues for the nine months ended September 30, 2004 increased 146% to $32.6 million from $13.3 million for the corresponding prior year period. The increase in total revenue for both the quarter and nine months ended September 30, 2004 as compared to the corresponding prior year periods was due to the increase in product sales, which was driven in large part by sales related to the United States Postal Service (USPS) Bio-hazard Detection System (BDS), and, to a lesser extent, Life Sciences and Clinical Genetic Assessment product sales. Other revenues of $0.6 million and $2.1 million for the quarter and nine months ended September 30, 2004, respectively, was primarily derived from the amortization of up-front license fees in connection with the Company's collaboration with bioMerieux. Gross Margin Dollars on product sales (total product sales less cost of product sales) for the quarter and nine months ended September 30, 2004 increased by 218% and 208%, respectively, as compared to the corresponding prior year periods. The gross margin percentage on product sales for the quarter ended September 30, 2004 was 44% as compared to 40% for the corresponding prior year period and increased to 46% for the nine months ended September 30, 2004 as compared to 41% for the corresponding prior year period. The increase in product gross margin in the quarter and nine months ended September 30, 2004, as compared to the corresponding prior year periods was primarily due to a change in product mix to higher gross margin products, partially offset by the increase in royalty and license costs resulting from the recent license agreements with Applera Corporation (Applera) and F. Hoffmann-La Roche Ltd. (Roche). Gross margin on product sales for future quarters is expected to continue to be impacted by higher royalties related to these license arrangements and is expected to be consistent with the product gross margin of 45% achieved for the full year 2003. Net loss for the quarter and nine months ended September 30, 2004 was approximately $2.9 million, or $0.07 per share and $10.8 million, or $0.26 per share, respectively, compared to a net loss of approximately $3.9 million, or $0.11 per share and $13.0 million, or $0.40 per share for the corresponding prior year periods. "Based on the completion of our previously announced license arrangements with Applera, through Applied Biosystems (ABI) and Celera Diagnostics, and with Roche, the Company initiated during the quarter shipment of the first of our ASR products which identifies B. pertussis, followed by our second ASR product which identifies HSV in October," stated John Bishop, Cepheid's Chief Executive Officer. "We further expect to initiate shipment of up to four additional ASR products before the end of the year." "Sales within the Clinical market segment continue to grow with additional institutions adopting GBS testing utilizing the IDI-Step B product on the SmartCycler. As a subsequent event, in October Infectio Diagnostics, Inc. (IDI) announced that it was merging with GeneOhm Sciences, of San Diego. We do not expect the merger to affect our non-exclusive distribution rights nor license rights to IDI's GBS, MRSA and potential VRE products. IDI began shipments of the IDI-MRSA product for use on the SmartCycler in October." "Deployment of the Northrop Grumman BDS within various processing centers of the USPS continues to progress. BDS unit installations have been completed at over 35 different USPS sites. We expect approximately 700 BDS units to be installed by the completion of phase 1 in the first quarter of 2005. The systems and the test cartridges continue to perform well. We expect there will be a phase 2 and continue to expect to be notified concerning the timing and magnitude of the phase 2 program either at the end of the fourth quarter this year or in early 2005. We currently do not expect to see an interruption in deployment of BDS units upon the completion of phase 1 and the initiation of phase 2." "We continued to expand our worldwide distribution of products into the Life Sciences market with the announcement of a new distributor in China during the quarter." 2004 Outlook Commenting on Cepheid's outlook for the remainder of 2004, Mr. Bishop stated: "As previously stated, we expect to see continued growth in the Life Sciences and Clinical Genetic Assessment markets. We expect to initiate shipment of up to four additional ASR products which identify infectious disease organisms on the SmartCycler System in the fourth quarter. Further, we expect to be in clinical trials for our first 510k product, for Group-B Strep (GBS) on the GeneXpert System. Market launch of the GeneXpert GBS is expected in the first half of 2005." "We are increasing our expected range of 2004 product sales to, $46.0 million to $48.0 million, based on Phase I sales for the USPS program and sales expected from other existing and new products. We expect our gross profit margin on product sales for 2004 to be consistent with that achieved in 2003 at 45%. Based on an increase in R&D investment to accelerate delivery of our ASR and Clinical products and manufacturing scale up variances, we now expect our 2004 net loss to be in the range of $13.7 million to $14.7 million or $0.33 to $0.35 per share based on actual weighted average shares outstanding of 41.9 million as of September 30, 2004." As of September 30, 2004, the Company had $58.2 million in unrestricted cash. Conference Call Information Cepheid's CEO, John Bishop, and Senior V.P. and CFO, John Sluis will host a conference call today at 4:30 pm (Eastern) to discuss Cepheid's financial results, business highlights and outlook. The call will be simultaneously broadcast over the Internet. Interested participants and investors may access the teleconference call by dialing 800-257-7063 (domestic) or 303-275-2170 (international). There will also be a live webcast of the call on the Investor Relations section of Cepheid's web site at www.cepheid.com. Web participants are encouraged to go to the web site at least 15 minutes prior to the start of the call to register, download, and install any necessary audio software. After the live webcast, the call will remain available on Cepheid's website, www.cepheid.com, for 12 months. A replay of the conference call will be available at 800-405-2236 (domestic) or 303-590-3000 (international) through November 9, 2004; the conference ID is 11013887. The replay will be available after 6:30 pm (Eastern). About Cepheid Cepheid (Nasdaq: CPHD), based in Sunnyvale, Calif., is a leading developer, manufacturer and marketer of fully integrated systems that enable genetic assessment when and where it is needed. Founded in 1996, the company is commercializing its technology and products worldwide for research, medical, and industrial applications requiring assessment of the human genome, infectious disease and biothreat agents. See www.cepheid.com for more information. This press release contains forward-looking statements that are not purely historical regarding Cepheid's or its management's intentions, beliefs, expectations and strategies for the future, including those relating to future product releases, future revenues, future gross margin, future net losses and other financial data, the status of the USPS BDS program, contractual relationships and business prospects. Because such statements deal with future events, they are subject to various risks and uncertainties, and actual results could differ materially from the company's current expectations. Factors that could cause actual results to differ materially include risks and uncertainties such as those relating to: the scope and timing of actual USPS funding and deployment of the BDS; uncertainties relating to the timing of any approval of future deployments by government agencies; the rate of environmental testing using the BDS conducted by the USPS, which will affect the amount of consumable products sold, whether the BDS performs to specifications; unforeseen research, development and manufacturing problems, including with respect to the GeneXpert system and reagents; unforeseen manufacturing costs; the need for additional licenses for new tests and other products and the terms of such licenses; our ability to successfully commercialize our stand-alone GeneXpert system; lengthy sales cycles in certain markets; our ability to successfully obtain regulatory approvals and introduce new products in the clinical market; the performance and market acceptance of new products; our reliance on distributors to market, sell our products; the occurrence of unforeseen expenditures, acquisitions or other transactions; the effect of acquisitions in our industry on relationships with partners; our success in increasing direct sales; the impact of competitive products and pricing; our ability to manage geographically-dispersed operations; and underlying market conditions worldwide. Readers should also refer to the section entitled "Risk Factors" in Cepheid's Annual Report on Form 10-K for 2003 and "Factors that Might Affect Future Results" in its most recent quarterly report on Form 10-Q, each filed with the Securities and Exchange Commission. All forward-looking statements and reasons why results might differ included in this release are made as of the date of this press release, based on information currently available to Cepheid, and Cepheid assumes no obligation to update any such forward-looking statement or reasons why results might differ. For further information please contact: John L. Bishop, CEO, john.bishop@cepheid.com, or John R. Sluis, CFO, john.sluis@cepheid.com, both of Cepheid, +1-408-541-4191; or media, Tim Grace, +1-312-640-6741, tgrace@financialrelationsboard.com, or investors/analysts, Tricia Ross, +1-617-520-7064, tross@financialrelationsboard.com, both of Financial Relations Board for Cepheid. (FINANCIAL STATEMENTS FOLLOW) CEPHEID CONDENSED CONSOLIDATED STATEMENTS OF OPERATIONS (Unaudited) (in thousands, except per share data) Quarter Ended Nine Months Ended September 30, September 30, 2004 2003 2004 2003 Revenues: Instrument sales $8,064 $4,074 $20,648 $9,433 Reagent and disposable sales 5,385 568 9,918 1,523 Product sales 13,449 4,642 30,566 10,956 Contract revenues 624 106 2,044 426 Grant and government sponsored research revenue 4 619 13 1,868 Total revenues 14,077 5,367 32,623 13,250 Costs and operating expenses: Cost of product sales 7,494 2,768 16,625 6,433 Research and development 4,037 3,861 11,531 11,430 Selling, general and administrative 3,984 2,646 11,485 8,364 Expense contingency for patent related matter -- -- 1,264 -- Collaboration profit sharing 1,474 -- 2,506 -- Total costs and operating expenses 16,989 9,275 43,411 26,227 Loss from operations (2,912) (3,908) (10,788) (12,977) Other expenses, net (3) 7 15 (34) Net loss $(2,915) $(3,901) $(10,773) $(13,011) Basic and diluted net loss per share $(0.07) $(0.11) $(0.26) $(0.40) Shares used in computing basic and diluted net loss per share 41,889 33,985 40,775 32,596 CEPHEID CONDENSED CONSOLIDATED BALANCE SHEETS (in thousands) September 30, December 31, 2004 2003 ASSETS (unaudited) (1) Current assets: Cash and cash equivalents $58,239 $18,510 Accounts receivable 9,091 3,504 Collaboration receivable -- 5,000 Inventory 6,760 5,088 Prepaid expenses and other current assets 687 650 Total current assets 74,777 32,752 Property and equipment, net 9,561 8,071 Intangible assets, net 31,244 47 Restricted cash 688 688 Total assets $116,270 $41,558 LIABILITIES AND SHAREHOLDERS' EQUITY Current liabilities: Accounts payable $5,524 $1,823 Accrued compensation 1,652 1,604 Accrued other liabilities 4,224 2,350 Current portion of deferred revenue 4,658 3,239 Current portion of license fees payable 10,89898 -- Current portion of equipment financing 2,129 1,897 Total current liabilities 29,085 10,913 Long-term portion of deferred revenue 6,667 8,095 Long-term portion of license fees payable 9,477 -- Equipment financing, less current portion 1,954 1,978 Deferred rent 576 497 Commitments Shareholders' equity: Preferred stock -- -- Common stock 151,923 92,694 Additional paid-in capital 7,513 7,501 Accumulated other comprehensive loss (45) (13) Accumulated deficit (90,880) (80,107) Total shareholders' equity 68,511 20,075 Total liabilities and shareholders' equity $116,270 $41,558 (1) The balance sheet at December 31, 2003 has been derived from the Company's audited financial statements, which are included in the Company's 2003 Annual Report on Form 10-K filed with the Securities and Exchange Commission. SOURCE Cepheid -0- 11/02/2004 /CONTACT: John L. Bishop, CEO, john.bishop@cepheid.com, or John R. Sluis, CFO, john.sluis@cepheid.com, both of Cepheid, +1-408-541-4191; or media, Tim Grace, +1-312-640-6741, tgrace@financialrelationsboard.com, or investors/analysts, Tricia Ross, +1-617-520-7064, tross@financialrelationsboard.com, both of Financial Relations Board for Cepheid/ /Web site: http://www.cepheid.com / (CPHD) CO: Cepheid; bioMerieux; Applera Corporation; F. Hoffmann-La Roche Ltd.; Roche; Applied Biosystems; ABI; Celera Diagnostics ST: California IN: CPR BIO HEA MTC SU: ERN CCA ERP