UNITED STATES SECURITIES AND EXCHANGE COMMISSION WASHINGTON, D.C. 20549 -------- FORM N-CSR -------- CERTIFIED SHAREHOLDER REPORT OF REGISTERED MANAGEMENT INVESTMENT COMPANIES INVESTMENT COMPANY ACT FILE NUMBER 811-07923 CNI CHARTER FUNDS (Exact name of registrant as specified in charter) -------- 400 North Roxbury Drive Beverly Hills, CA 90210 (Address of principal executive offices) (Zip code) SEI Investments Distributors 1 Freedom Valley Drive Oaks, PA 19456 (Name and address of agent for service) REGISTRANT'S TELEPHONE NUMBER, INCLUDING AREA CODE: 1-888-889-0799 DATE OF FISCAL YEAR END: SEPTEMBER 30, 2006 DATE OF REPORTING PERIOD: SEPTEMBER 30, 2006 ITEM 1. REPORTS TO STOCKHOLDERS. CNI CHARTER FUNDS(SM) [LOGO OMITTED](R) [GRAPHIC OMITTED] CNI Charter Funds 2006 Annual Report September 30, 2006 This report and the financial statements contained herein are provided for the general information of the shareholders of the CNI Charter Funds. This report is not authorized for distribution to prospective investors in the CNI Charter Funds unless preceded or accompanied by an effective prospectus. Please remember that past performance is no guarantee of future results. Shares of CNI Charter Funds are not deposits or obligations of any bank, are not guaranteed by any bank, are not insured by the FDIC or any other agency and involve investment risks, including the possible loss of the principal amount invested. TABLE OF CONTENTS CNI Charter Funds Annual Report 2 Letter to Our Shareholders 4 Equity Funds Investment Adviser's Report 6 Equity Funds Overview 10 Fixed Income Funds Investment Adviser's Report 12 Fixed Income Funds Overview 16 Money Market Funds Investment Adviser's Report 17 Schedules of Investments 58 Statements of Assets & Liabilities 61 Statements of Operations 64 Statements of Changes in Net Assets 68 Financial Highlights 71 Notes to Financial Statements 78 Report of Independent Registered Public Accounting Firm 79 Board Members and Officers 82 Notice to Shareholders 83 Disclosure of Fund Expenses 85 Approval of Investment Advisory Agreements ================================================================================ The Funds file their complete schedule of portfolio holdings with the Securities and Exchange Commission for the first and third quarters of each fiscal year on Form N-Q within sixty days after the end of the period. The Funds' Form N-Q is available on the Commission's website at http://www.sec.gov, and may be reviewed and copied at the Commission's Public Reference Room in Washington, DC. Information on the operation of the Public Reference Room may be obtained by calling 1-800-SEC-0330. The most current Form N-Q is also available on the Fund's website at www.cnicharterfunds.com and without charge, upon request, by calling 1-888-889-0799. A description of the policies and procedures that the Funds use to determine how to vote proxies relating to the Funds' portfolio securities, and information on how the Funds voted proxies relating to portfolio securities during the most recent 12-month period ending June 30 is available (1) without charge, upon request, by calling 1-888-889-0799, (2) on the Funds' website at www.cnicharterfunds.com, and (3) on the Securities and Exchange Commission's website at www.sec.gov. CNI CHARTER FUNDS | PAGE 1 letter to our shareholders SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- This annual report covers the CNI Charter Funds for the fiscal year ended September 30, 2006. On the following pages, you will find the specific details of each Fund's portfolio and investment performance. Our unique philosophy and disciplined approach to capital market investment continued to show well over the last twelve months. Relatively healthy economic growth and strong corporate earnings, combined with steady and rising inflation during most of this period produced strong returns to financial assets as well as many alternative asset classes, including real estate, commodities, and other real assets. Equity markets continued to surprise on the upside despite growing evidence of a maturing economic recovery and, more recently, an imminent slowdown in economic growth. Fixed income securities generally produced sub-par, single-digit returns as the Federal Reserve ended its monetary tightening program after 17 consecutive rate increases, leaving the Treasury yield curve inverted. By adhering strictly to our fundamental investment strategies we were able to produce highly competitive results in all asset categories within the CNI Charter Funds family. City National Asset Management, Inc.'s underlying investment philosophy is to pursue the long-term goals and objectives specified for each of the Funds. With an active yet disciplined style, all Funds are managed to achieve competitive rates of return consistent with their respective, prescribed risk parameters. CNI Charter Funds follow a disciplined investment process that begins with a thorough assessment of the macroeconomic environment and the financial markets. Our broad based research process takes advantage of the most advanced investment technology, fundamental valuation, and quantitative tools to determine the most attractive sectors and securities within each Fund's area of concentration. The final step is to construct and continuously monitor precise portfolios that meet the objectives of the specific Funds, without being swayed by short-term trends and fads. This approach continued to serve shareholders well during the maturing phase of this economic cycle encountered in the period ended September 30, 2006. TWELVE-MONTH MARKET WATCH: OCTOBER 2005 - SEPTEMBER 2006 Domestic economic growth remained above historical norms for the most part during the past twelve months, although clear, market-related signs of an imminent slowdown were beginning to emerge towards the end of this period. Stronger than expected corporate earnings growth combined with rising short-term interest rates were the primary factors driving the stock and bond markets over the last twelve months. International equities, in particular, showed very attractive returns in U.S. Dollar terms, given the relative weakness in the Dollar during this time. - -------------------------------------------------------------------------------- Twelve-Month October, 2005 - Index Watch: September, 2006 EQUITIES S&P 500 Stock Index: ............................................. +10.8% Russell 2000 Value Index: ........................................ +14.0% MSCI EAFE Index: ................................................. +19.2% BONDS Lehman Brothers Gov't/Credit Bond Index: ................................................... + 3.3% Lehman Brothers Aggregate Bond Index: ................................................... + 3.7% Lehman Brothers CA Intermediate Muni Index: ...................................... + 3.7% - -------------------------------------------------------------------------------- CNI CHARTER FUNDS | PAGE 2 - -------------------------------------------------------------------------------- CNI CHARTER FUND PERFORMANCE AND HIGHLIGHTS (ALL RETURNS LISTED REFER TO INSTITUTIONAL CLASS SHARES) By adhering to our basic investment discipline and maintaining the appropriate amount of risk control in the various portfolios, the Funds continued to provide returns that are competitive in their respective investment arenas. All four of our equity-oriented funds produced gains over the past twelve months, in keeping with the broader market trends. The LARGE CAP VALUE EQUITY FUND led the pack with a 14.5% return. The TECHNOLOGY GROWTH FUND rose 6.8%, followed closely by the LARGE CAP GROWTH EQUITY FUND, which gained 4.6%. The RCB SMALL CAP VALUE EQUITY FUND eked out a 0.4% return for the same period. All four CNI Charter Bond Funds also produced solid gains for the period. Once again, the HIGH YIELD BOND FUND led the way with a 6.9% total return. The CALIFORNIA TAX-EXEMPT BOND FUND rose 3.2%, while the CORPORATE BOND FUND returned 3.2% and the GOVERNMENT BOND FUND gained 2.9%. Lastly, all three of the CNI Charter Money Market Funds produced steady, consistent, and competitive returns. These returns were in line with their respective investment mandates. Please read the following pages carefully as they contain important information on the assets and financial condition of the Funds. If you have any questions about this report or the CNI Charter Funds, please call your investment professional or (888) 889-0799. Thank you for choosing the CNI Charter Funds. Sincerely, /s/ Richard A. Weiss Richard A. Weiss PRESIDENT CITY NATIONAL ASSET MANAGEMENT, INC. PAST PERFORMANCE IS NO GUARANTEE OF FUTURE RESULTS. CERTAIN SHAREHOLDERS MAY BE SUBJECT TO THE ALTERNATIVE MINIMUM TAX (AMT). FEDERAL INCOME TAX RULES APPLY TO ANY CAPITAL GAIN DISTRIBUTIONS. FUND EXPENSES HAVE BEEN WAIVED DURING THE PERIOD ON WHICH THE PERFORMANCE IS BASED. WITHOUT WAIVERS, PERFORMANCE WOULD BE LOWER. THIS INFORMATION MUST BE PRECEDED OR ACCOMPANIED BY A CURRENT PROSPECTUS. PLEASE READ THE PROSPECTUS CAREFULLY BEFORE INVESTING. INVESTING IN MUTUAL FUNDS INVOLVES RISK, INCLUDING POSSIBLE LOSS OF PRINCIPAL. IN ADDITIONAL TO THE NORMAL RISKS ASSOCIATED WITH INVESTING, INVESTMENTS IN SMALLER COMPANIES TYPICALLY EXHIBIT HIGHER VOLATILITY, AND PRODUCTS OF COMPANIES IN WHICH TECHNOLOGY FUNDS INVEST MAY BE SUBJECT TO SEVERE COMPETITION AND RAPID OBSOLESCENCE. AN INVESTMENT IN THE FUNDS IS NOT INSURED OR GUARANTEED BY THE FEDERAL DEPOSIT INSURANCE CORPORATION OR ANY OTHER GOVERNMENT AGENCY. - -------------------------------------------------------------------------------- *NOT FDIC INSURED *NO BANK GUARANTEE *MAY LOSE VALUE - -------------------------------------------------------------------------------- - -------------------------------------------------------------------------------- AHA Investment Funds, a series of the CNI Charter Funds - -------------------------------------------------------------------------------- Endorsed by the American Hospital Association, the five AHA Investment Funds encourage healthy behavior by having guidelines that prohibit investment in any tobacco-related securities. The five AHA Funds in the CNI Charter Fund family are: o AHA Limited Maturity Fixed Income Fund o AHA Full Maturity Fixed Income Fund o AHA Balanced Fund o AHA Diversified Equity Fund o AHA Socially Responsible Equity Fund These Funds together with the other eleven CNI Charter Funds provide an unwavering commitment to client satisfaction and quality investments that help successful individuals, families and businesses achieve their financial goals. For more information about the CNI Charter Funds (including the AHA Investment Funds) visit www.cnicharterfunds.com. CNI CHARTER FUNDS | PAGE 3 investment adviser's report SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- EQUITY FUNDS For the fiscal year ending September 30, 2006, the U.S. equity market, as measured by the S&P 500, returned 10.8%. The majority of the asset appreciation came in the first eight months of the fiscal year, as returns pushed higher into early May 2006. Corporate earnings remained the catalyst as growth rates, although lower than the previous year, continued to come in above expectations. Inflation fears, though, took a toll on the market in the middle of May 2006, as commodity prices continued to rise. The market sold off about 5% from its May highs, reaching its lows in mid June. Federal Reserve Bank ("Fed") Chairman Bernanke's talk in mid July started the recent market upturn on comments regarding the possible end to rising short-term interest rates. After raising the short-term rate to 5.25% in June, the Fed has kept rates stable in the two most recent Fed meetings. In addition to the Fed possibly ending its tightening policy, declines in commodity prices also provided a positive effect to stock prices. By the end of September, stock prices had surpassed their 12 month highs, with the Dow Jones Industrial Average surpassing its all time high. EQUITY FUND PERFORMANCE (ALL RETURNS LISTED FOR CNI CHARTER FUNDS REFER TO INSTITUTIONAL CLASS SHARES o The LARGE CAP VALUE EQUITY FUND returned 14.5% during the twelve months ending September 30, 2006. The S&P 500/Citigroup Value Index returned 15.4% and the Lipper Large-Cap Value Funds Classification returned 12.0% over the same time period. The telecommunications sector produced the top returns with companies like BellSouth producing a 69.0% return. The announced merger with AT&T (still pending) is expected to bring about improved efficiencies, cost reductions, and higher earnings. In the financial sector, Goldman Sachs gained 40.3% as earnings beat analysts' expectations on higher investment-banking fees. Ryder System, a leader in transportation and supply chain management, returned a positive 53.3%, as growth in its leasing unit continued to push earnings above expectations. Stocks that hurt performance included Intel, down 29.3%, as semiconductor prices declined and the company lost market share to rivals. Qualcomm was also down 22.0% on fears that increased usage of a rival phone technology will hurt their future earnings. o The LARGE CAP GROWTH EQUITY FUND returned 4.6% during the twelve months ending September 30, 2006. The S&P 500/Citigroup Growth Index returned 6.4% and the Lipper Large-Cap Growth Funds Classification returned 3.5%, over the same time period. Stocks that helped performance included the T. Rowe Price Group, which was up 25.2%. The asset management company benefit from strong asset flows into their fund complex. Pepsi Bottling Group, the second largest soft-drink distributor, gained 25.9% on increased sales of its "non-soda" products. In the technology sector, Oracle was up 43.1% as software license revenue surged due to recent acquisitions. Detractors from fund performance included Dell, down 33.2%. Dell missed analysts' earnings expectations due to competitive pricing and lost market share within the personal-computer market. Boston Scientific, maker of medical supplies, lost 36.7% due to the market's concern over a recent acquisition and issues regarding product quality. o The RCB SMALL CAP VALUE FUND returned 0.4% for the 12 months ending September 30, 2006 as compared with the Russell 2000 Value Index at 14.0%, the Russell 2000 Index at 9.9%, the Russell 2500 Value Index at 11.1%, and the Lipper Small Cap Value Funds Classification at 8.1%. The following text regarding performance has been provided by Reed, Connor & Birdwell, LLC, sub-adviser to the Fund. CNI CHARTER FUNDS | PAGE 4 investment adviser's report SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- "Over the trailing 12-month period we have grossly erred on the conservative side as far as asset allocation and stock selection while the investing world continued to embrace "risky" assets in the face of what we consider to be the uninspiring valuation of the overall market and mounting external risks. We believe this set of circumstances peaked in the first quarter of 2006 just in time to produce the maximum amount of performance embarrassment. However during the most recent quarter-end, we witnessed a nice rebound in year-to-date performance on an absolute basis and some "modest" make-up in relative performance. After a truly dismal four quarter run of relative performance, we believe we are back on track. Part of it is us; the mathematics of two takeovers of the largest positions in a concentrated portfolio (Advo and Intrawest) combined with a determination to stop making a few hellacious mistakes seemed to have produced the desired results. The other part consists of the small cap market forces which act as a headwind for the Fund. These would include liquidity, the inflows and subsequent outflows generated by exchange traded funds and the sector composition of the indexes. Our 30-odd stock portfolio has historically been able to side-step an index based headwind and we look forward to clawing back performance one stock at a time." o The TECHNOLOGY GROWTH FUND returned 6.8% during the twelve months ending September 30, 2006. The Russell 3000 Technology Index returned 6.1% and the Lipper Science & Technology Funds Objective returned 5.1%, over the same time period. Stocks that produced positive returns included Akamai Technologies, up 156.6%. The company exhibited strong earnings growth on increased demand for their software that accelerates the delivery of internet content. Cognizant Technology Solutions gained 58.9% on surging demand for computer consulting services. Apple Computer was up 43.6% on improved sales of their Macintosh personal computers and iPod music players. Stocks that lost ground included Tekelec, down 51.7%. The developer of telecommunication products and services had to restate earnings and take a write-down on a previous acquisition. NAVTEQ, a leading provider of navigation systems, lost 47.7% on declining sales in the automotive industry and delays in new product launches. STRATEGIC OUTLOOK FOR EQUITY FUNDS As we look forward, the strength of the economy and its effect on inflation and interest rates is the question of the day. Market strategists are divided. Some see lower rates on slower economic growth. Others see higher rates based on higher inflation and stronger than expected economic growth. At City National Asset Management, Inc., we see growing evidence of a maturing economic recovery and a slowdown in economic growth. Still, most economists are not calling for a recession anytime in the near future. In this environment, as in all market environments, we will continue to apply our disciplined investment approach with the objective of providing superior investment results across the various strategies we manage. Sincerely, /s/ Brian L. Garbe Brian L. Garbe DIRECTOR OF RESEARCH CITY NATIONAL ASSET MANAGEMENT, INC. CNI CHARTER FUNDS | PAGE 5 fund overview SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- LARGE CAP VALUE EQUITY FUND The Fund seeks to provide capital appreciation and moderate income consistent with current returns available in the market place by investing in large U.S. corporations and U.S. dollar denominated American Depository Receipts of large foreign corporations which are undervalued and whose market valuations compare favorably relative to similar companies. - ------------------------------------------------------------------------------- Comparison of Change in the Value of a $10,000 Investment in the CNI Large Cap Value Equity Fund, Institutional Class or Class A Shares, versus the S&P 500/ Citigroup Value Index, and the Lipper Large Cap Value Funds Classification(1) [LINE GRAPHIC OMITTED] PLOT POINTS ARE AS FOLLOWS: LARGE CAP VALUE EQUITY FUND CNI Large Cap Value Fund, CNI Large Cap Value Fund, S&P 500/Citigroup Lipper Large Cap Institutional Class Shares Class A Shares Value Index Value Funds Index 1/14/00 10,000 10,000 10,000 10,000 9/30/00 10,099 10,093 9,871 10,449 9/30/01 8,446 8,410 8,508 9,641 9/30/02 6,852 6,814 6,989 7,783 9/30/03 8,498 8,433 8,579 9,544 9/30/04 10,147 10,036 10,271 11,137 9/30/05 11,607 11,455 11,950 12,644 9/30/06 13,290 13,086 13,796 14,160 (*) Standard and Poor's has changed the name and the construction methodology of their style indices. The S&P 500/Barra Value Index became the S&P 500/Citigroup Value Index in mid-December 2005. The Large Cap Value Fund will use the new index as a comparative investment benchmark going forward. (1) The performance in the above graph does not reflect the deduction of taxes the shareholder will pay on Fund distributions or the redemptions of Fund shares. Investment performance reflects fee waivers in effect. In the absence of such waivers, total return would be reduced. Past performance is no indication of future performance. The Fund's comparative benchmarks do not include the annual operating expenses incurred by the Fund. Please note that one cannot invest directly in an unmanaged index. AVERAGE ANNUAL TOTAL RETURNS - ------------------------------------------------------------------------------- Ticker 1-Year 3-Year 5-Year Inception Shares Symbol Return Return Return to Date - ------------------------------------------------------------------------------- Institutional Class (1)^ CNLIX 14.50% 16.07% 9.49% 4.33% - ------------------------------------------------------------------------------- Class A (2) CVEAX 14.24% 15.78% 9.25% 4.09%+ - ------------------------------------------------------------------------------- (1) Commenced operations on January 14, 2000. (2) Commenced operations on April 13, 2000. ^ The Fund's Institutional Class Shares are currently offered only to accounts where City National Bank serves as trustee or in a fiduciary capacity. + Class A Shares performance for the period prior to April 13, 2000 reflects the performance of the Fund's Institutional Shares. The performance of the Institutional Shares has not been adjusted to reflect the higher Rule 12b-1 Fees and expenses applicable to Class A Shares. If it had, performance would have been lower than that shown. Top Ten Holdings % OF PORTFOLIO Bank of America 3.6 Citigroup 3.2 Exxon Mobil 2.7 Wells Fargo 2.5 Verizon Communications 2.4 Hewlett-Packard 2.4 Wachovia 1.9 Morgan Stanley 1.9 BellSouth 1.9 American International Group 1.8 CNI CHARTER FUNDS | PAGE 6 fund overview SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- LARGE CAP GROWTH EQUITY FUND The Fund seeks to provide capital appreciation by investing in large U.S. corporations and U.S. dollar denominated American Depository Receipts of large foreign corporations with the potential for growth and that possess superior management, strong market position, consistent records of increased earnings and a strong operating and financial position. - ------------------------------------------------------------------------------- Comparison of Change in the Value of a $10,000 Investment in the CNI Large Cap Growth Equity Fund, Institutional Class or Class A Shares, versus the S&P 500/Citigroup Growth Index, and the Lipper Large Cap Growth Funds Classification(1) [LINE GRAPHIC OMITTED] PLOT POINTS ARE AS FOLLOWS: LARGE CAP GROWTH EQUITY FUND CNI Large Cap Growth Equity Fund, CNI Large Cap Growth Equity Fund, S&P 500/Citigroup Lipper Large Cap Institutional Class Shares Class A Shares Growth Index* Growth Funds Classification 1/14/00 $10,000 $10,000 $10,000 $10,000 9/30/00 9,370 9,349 9,763 10,314 9/30/01 6,360 6,329 5,950 6,080 9/30/02 5,250 5,210 4,538 4,814 9/30/03 6,380 6,320 5,717 5,825 9/30/04 6,775 6,691 6,203 6,259 9/30/05 7,490 7,379 6,709 7,040 9/30/06 7,834 7,715 7,138 7,288 (*) Standard and Poor's has changed the name and the construction methodology of their style indices. The S&P 500/Barra Growth Index became the S&P 500/Citigroup Growth Index in mid-December 2005. The Large Cap Growth Fund will use the new index as a comparative investment benchmark going forward. (1) The performance in the above graph does not reflect the deduction of taxes the shareholder will pay on Fund distributions or the redemptions of Fund shares. Investment performance reflects fee waivers in effect. In the absence of such waivers, total return would be reduced. Past performance is no indication of future performance. The Fund's comparative benchmarks do not include the annual operating expenses incurred by the Fund. Please note that one cannot invest directly in an unmanaged index. AVERAGE ANNUAL TOTAL RETURNS - -------------------------------------------------------------------------------- Ticker 1-Year 3-Year 5-Year Inception Shares Symbol Return Return Return to Date - -------------------------------------------------------------------------------- Institutional Class (1)^ CNGIX 4.59% 7.08% 4.25% (3.57)% - -------------------------------------------------------------------------------- Class A (2) CLEAX 4.55% 6.87% 4.03% (3.79)%+ - -------------------------------------------------------------------------------- (1) Commenced operations on January 14, 2000. (2) Commenced operations on March 28, 2000. ^ The Fund's Institutional Class Shares are currently offered only to accounts where City National Bank serves as trustee or in a fiduciary capacity. + Class A Shares performance for the period prior to March 28, 2000 reflects the performance of the Fund's Institutional Shares. The performance of the Institutional Shares has not been adjusted to reflect the higher Rule 12b-1 Fees and expenses applicable to Class A Shares. If it had, performance would have been lower than that shown. Top Ten Holdings % OF PORTFOLIO Exxon Mobil 4.7 Procter & Gamble 3.5 Microsoft 3.0 General Electric 2.4 Wal-Mart Stores 2.4 Johnson & Johnson 2.4 Amgen 2.2 PepsiCo 2.1 Gilead Sciences 1.9 UnitedHealth Group 1.7 CNI CHARTER FUNDS | PAGE 7 fund overview SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- RCB SMALL CAP VALUE FUND The Fund seeks to provide capital appreciation by investing primarily in smaller U.S. corporations which are considered undervalued. - ------------------------------------------------------------------------------- Comparison of Change in the Value of a $10,000 Investment in the CNI RCB Small Cap Value Fund, Institutional Class, Class A or Class R Shares, versus the Russell 2500 Value Index, the Russell 2000 Index, the Russell 2000 Value Index, the Lipper Small Cap Value Funds Classification(1), and the Lipper Small Cap Core Funds Classification(1) [LINE GRAPHIC OMITTED] PLOT POINTS ARE AS FOLLOWS: RCB SMALL CAP VALUE FUND CNI RCB Small Cap CNI RCB CNI RCB Value Fund, Small Cap Small Cap Lipper Small Lipper Small Institutional Value Fund, Value Fund, Russell 2000 Russell 2000 Russell 2500 Cap Value Funds Cap Core Funds Class Shares Class A Shares Class R Shares Index Value Index Value Index Classification Classification <s> 9/30/98 $10,000 $10,000 $ 9,650 $10,000 $10,000 $10,000 $10,000 $10,000 9/30/99 15,120 15,120 14,591 11,907 10,583 10,840 11,193 12,044 9/30/00 16,859 16,859 16,269 14,692 12,209 12,547 13,113 15,646 9/30/01 18,395 18,395 17,751 11,576 12,893 12,863 13,741 14,011 9/30/02 16,353 16,331 15,740 10,499 12,705 12,784 13,694 13,228 9/30/03 23,802 23,714 22,856 14,332 16,728 16,779 17,812 17,376 9/30/04 29,745 29,557 28,485 17,022 21,020 20,899 22,133 20,968 9/30/05 32,681 32,380 31,208 20,077 24,751 25,355 26,216 24,969 9/30/06 32,811 32,435 31,252 22,069 28,219 28,177 28,350 26,854 (1) The performance in the above graph does not reflect the deduction of taxes the shareholder will pay on Fund distributions or the redemptions of Fund shares. Investment performance reflects fee waivers in effect. In the absence of such waivers, total return would be reduced. Past performance is no indication of future performance. The Fund's comparative benchmarks do not include the annual operating expenses incurred by the Fund. Please note that one cannot invest directly in an unmanaged index. AVERAGE ANNUAL TOTAL RETURNS - ------------------------------------------------------------------------------- Ticker 1-Year 3-Year 5-Year Inception Shares Symbol Return Return Return to Date - ------------------------------------------------------------------------------- Institutional Class (1)^ RCBIX 0.40% 11.29% 12.27%+ 16.01%+ - ------------------------------------------------------------------------------- Class A (1) RCBAX 0.17% 11.00% 12.01%+ 15.85%+ - ------------------------------------------------------------------------------- Class R (2) RCBSX 0.14% 11.00% 11.98% 15.82% - ------------------------------------------------------------------------------- Class R with load RCBSX (3.38)% 9.69% 11.19% 15.31% - ------------------------------------------------------------------------------- (1) Commenced operations on October 3, 2001. (2) Commenced operations on September 30, 1998. ^ The Fund's Institutional Class Shares are currently offered only to accounts where City National Bank serves as trustee or in a fiduciary capacity. + The performance of the Institutional Class and Class A Shares for the period prior to October 3, 2001 reflect the performance of the Class R Shares of a predecessor mutual fund. The performance of the Class R Shares has not been adjusted to reflect the Rule 12b-1 Fees and expenses applicable to Institutional and Class A Shares. Fees for the Institutional Class Shares are lower than the fees for the Class R Shares; correspondingly, performance would have been higher than that shown. Top Ten Holdings* % OF PORTFOLIO Lodgenet Entertainment 7.3 Alleghany 5.1 Smart & Final 4.8 White Mountains Insurance Group 4.4 USI Holdings 4.4 Ralcorp Holdings 4.3 Annaly Mortgage Management 4.3 Montpelier Re Holdings 4.3 Conseco 4.2 Jacuzzi Brands 4.1 *Excludes Repurchase Agreement CNI CHARTER FUNDS | PAGE 8 fund overview SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- TECHNOLOGY GROWTH FUND The Fund seeks to provide long-term capital appreciation by investing in U.S. corporations and U.S. dollar denominated American Depository Receipts of foreign corporations with the potential for growth and that are engaged in the production, distribution and development of products or services based on technology and should benefit significantly from advances or improvements in technology. - -------------------------------------------------------------------------------- Comparison of Change in the Value of a $10,000 Investment in the CNI Technology Growth Fund, Institutional Class or Class A Shares, versus the Russell 3000 Technology Index, and the Lipper Science & Technology Funds Objective(1) [LINE GRAPHIC OMITTED] PLOT POINTS ARE AS FOLLOWS: TECHNOLOGY GROWTH FUND CNI Technology CNI Technology Lipper Science Growth Fund Growth Fund Russell 3000 & Technology Institutional Class Shares Class A Shares Technology Index Funds Objective 10/03/00 $10,000 $10,000 $10,000 $10,000 9/30/01 3,544 3,463 3,608 3,494 9/30/02 2,262 2,201 2,449 2,308 9/30/03 3,504 3,405 3,953 3,819 9/30/04 3,464 3,346 3,951 3,871 9/30/05 4,044 3,894 4,560 4,565 9/30/06 4,318 4,139 4,839 4,796 (1) The performance in the above graph does not reflect the deduction of taxes the shareholder will pay on Fund distributions or the redemptions of Fund shares. Investment performance reflects fee waivers in effect. In the absence of such waivers, total return would be reduced. Past performance is no indication of future performance. The Fund's comparative benchmarks do not include the annual operating expenses incurred by the Fund. Please note that one cannot invest directly in an unmanaged index. AVERAGE ANNUAL TOTAL RETURNS - ------------------------------------------------------------------------------- Ticker 1-Year 3-Year 5-Year Inception Shares Symbol Return Return Return to Date - ------------------------------------------------------------------------------- Institutional Class (1)^ CTEIX 6.77% 7.22% 4.03% (13.08)% - ------------------------------------------------------------------------------- Class A (2) CTGAX 6.30% 6.73% 3.63% (13.80)% - ------------------------------------------------------------------------------- (1) Commenced operations on October 3, 2000. (2) Commenced operations on October 23, 2000. ^ The Fund's Institutional Class Shares are currently offered only to accounts where City National Bank serves as trustee or in a fiduciary capacity. Top Ten Holdings % OF PORTFOLIO Microsoft 8.0 Hewlett-Packard 5.2 IBM 4.3 Cisco Systems 4.0 Intel 3.8 Texas Instruments 3.6 Qualcomm 3.5 Oracle 3.1 Apple Computer 2.9 Symantec 2.6 CNI CHARTER FUNDS | PAGE 9 investment adviser's report SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- FIXED INCOME FUNDS The bond market is more focused on an economic slowdown at the end of the fiscal year ending September 30, 2006. The Federal Reserve Bank ("Fed") has been on hold for the last three Federal Open Market Committee (FOMC) meetings due to the weaker economic news and slightly tamer inflationary reports. During this fiscal period, the Fed raised rates six times and is now on hold at a 5.25% Fed Funds rate. During the fiscal year, City National Asset Management, Inc. altered its maturity posture to its investment grade bond funds from a slightly defensive position to a neutral stance versus our comparative benchmarks. This strategy shift comes after rates have been increasing for several quarters. The yield curve remains quite flat or inverted as investors debate how long the Fed will remain on hold. Looking ahead, we are focused more on "horizon return" than yield to maturity. If the Fed reverses course and starts lowering interest rates to counter a weak economy in the future, the biggest risk to the bond investors, in our opinion, would be re-investment risk. So even if there is little yield to be garnered by extending out maturities at this juncture, we are keeping an eye on our maturity posture and might move it from a neutral maturity stance to an aggressive maturity stance versus our comparative benchmarks in order to lock in these higher rates for an extended period of time. BOND FUND PERFORMANCE (ALL RETURNS LISTED FOR CNI CHARTER FUNDS REFER TO INSTITUTIONAL CLASS SHARES) o The CORPORATE BOND FUND produced a total return of 3.2% for the last 12 months. For the same period, the Lehman Intermediate U.S. Corporate Index 3.6%. The corporate bond universe is heavily weighted in lower quality (Baa) rated securities that did reasonably well during this recent period and yield spreads for corporate bonds versus Treasuries remained tight. This Fund continued to retain a higher quality profile than the Index and thus did not capture all of the performance garnered by the lower quality bonds. The Fund's performance compares favorably with its peer group where the Lipper Short/Intermediate Investment Grade Objective was up 3.1%. o The GOVERNMENT BOND FUND produced a total return of 2.9% for the last 12 months. For the same period, the Lehman Intermediate U.S. Government Bond Index returned 3.5%. Our defensive maturity posture for the Fund worked for most of the period but underperformed after rates peaked in June 2006. Since that time, we have extended our average maturity in the Fund to capture the higher yields and position the Fund for appreciation potential if rates decline. The Fund performance relative to the peer group is tracking closely as measured by the Lipper Short Intermediate U.S. Government Objective return of 3.0%. o The CALIFORNIA TAX EXEMPT BOND FUND produced a total return of 3.2% for the last 12 months. For the same period, the Lehman CA Intermediate-Short Municipal Bond Index returned 3.2%. The Fund's strategy tracked close to the benchmark but trailed slightly as we extended our average maturity to lock in the higher yields during the mid-summer. The Fund's performance compares favorably with its peer group where the Lipper California Short/Intermediate Municipal Debt Objective returned 3.0%. o The HIGH YIELD BOND FUND produced a total return of 6.9% for the last 12 months. For the same period, the Citigroup High Yield Market Index returned 7.4%. Absolute performance remained strong for this sector even though the economy showed signs of a slowdown. The Fund trailed the Index slightly due its underweight in the lowest quality of bonds within the Index. The Fund's relative performance vis-a-vis its peer group remained positively competitive where the Lipper High Current Yield Bond Funds Objective returned 6.7%. CNI CHARTER FUNDS | PAGE 10 investment adviser's report SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- STRATEGIC OUTLOOK FOR BOND FUNDS With economic news all focused on an economic slowdown, many observers expect the Fed to pause indefinitely in its rate hike campaign or even reverse course in the quarters leading into 2007 if a problem develops in the economy. If so, the biggest risk for the typical bond investor or Fund in the coming quarters is "reinvestment risk" -- the possibility that funds reinvested as bonds mature may be at lower rates. With that said, we are positioned for stable rates in the near-term as evidenced by our neutral maturity stance versus the benchmarks. We are poised to extend maturities on major market sell-offs or if we see significant economic weakness coupled with a decline in inflationary measures. We continue to monitor these and other factors in order to add value to our actively managed bond funds in all interest rate environments. Sincerely, /s/ Rodney J. Olea Rodney J. Olea DIRECTOR OF FIXED INCOME CITY NATIONAL ASSET MANAGEMENT, INC. CNI CHARTER FUNDS | PAGE 11 fund overview SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- CORPORATE BOND FUND The Fund seeks to provide current income (as the primary component of a total return, intermediate duration strategy) by investing in a diversified portfolio of investment grade fixed income securities, primarily corporate bonds issued by domestic and international companies denominated in U.S. dollars. - -------------------------------------------------------------------------------- Comparison of Change in the Value of a $10,000 Investment in the CNI Corporate Bond Fund, Institutional Class or Class A Shares, versus the Lehman Intermediate Corporate Index, and Lipper Short/Intermediate Investment Grade Debt Objective(1) [LINE GRAPHIC OMITTED] PLOT POINTS ARE AS FOLLOWS: CORPORATE BOND FUND CNI Corporate CNI Corporate Lehman Lipper Short/ Bond Fund Bond Fund Intermediate Intermediate Investment Institutional Class Shares Class A Shares Corporate Index Grade Debt Objective 1/14/00 $10,000 $10,000 $10,000 $10,000 9/30/00 10,577 10,592 10,644 10,569 9/30/01 11,861 11,871 11,992 11,750 9/30/02 12,580 12,547 12,852 12,392 9/30/03 13,428 13,359 14,129 12,997 9/30/04 13,717 13,624 14,686 13,266 9/30/05 13,890 13,748 14,946 13,427 9/30/06 14,333 14,151 15,479 13,838 (1) The performance in the above graph does not reflect the deduction of taxes the shareholder will pay on Fund distributions or the redemptions of Fund shares. Investment performance reflects fee waivers in effect. In the absence of such waivers, total return would be reduced. Past performance is no indication of future performance. The Fund's comparative benchmarks do not include the annual operating expenses incurred by the Fund. Please note that one cannot invest directly in an unmanaged index. AVERAGE ANNUAL TOTAL RETURNS - ------------------------------------------------------------------------------- Ticker 1-Year 3-Year 5-Year Inception Shares Symbol Return Return Return to Date - ------------------------------------------------------------------------------- Institutional Class (1)^ CNCIX 3.19% 2.20% 3.86% 5.51% - ------------------------------------------------------------------------------- Class A (2) CCBAX 2.93% 1.94% 3.58% 5.31%+ - ------------------------------------------------------------------------------- (1) Commenced operations on January 14, 2000. (2) Commenced operations on April 13, 2000. ^ The Fund's Institutional Class Shares are currently offered only to accounts where City National Bank serves as trustee or in a fiduciary capacity. + Class A Shares performance for the period prior to April 13, 2000 reflects the performance of the Fund's Institutional Shares. The performance of the Institutional Shares has not been adjusted to reflect the higher Rule 12b-1 Fees and expenses applicable to Class A Shares. If it had, performance would have been lower than that shown. Top Ten Holdings* % OF PORTFOLIO General Electric Capital, Ser A, MTN 6.000%, 6/15/12 2.7 Giro Balanced Funding 5.270%, 10/05/06 2.6 FNMA CMO, Ser 2002-56, Cl MC 5.500%, 09/25/07 2.3 FHLMC, Ser R004, Cl Al 5.125%, 12/15/13 2.2 Union Planters Bank 5.125%, 06/15/07 2.1 Lehman Brothers Holdings 8.250%, 06/15/07 2.0 Walt Disney 5.700%, 07/15/11 2.0 National Rural Utilities, Ser C, MTN 7.250%, 03/01/12 1.9 AXA Financial 7.750%, 08/01/10 1.9 U.S. Treasury Inflation Index Note 2.000%, 01/15/14 1.9 * Excludes Cash Equivalents CNI CHARTER FUNDS | PAGE 12 fund overview SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- GOVERNMENT BOND FUND The Fund seeks to provide current income (as the primary component of a total return, intermediate duration strategy) by investing primarily in U.S. government securities either issued or guaranteed by the U.S. government or its agencies or instrumentalities. - -------------------------------------------------------------------------------- Comparison of Change in the Value of a $10,000 Investment in the CNI Government Bond Fund, Institutional Class or Class A Shares, versus the Lehman Intermediate U.S. Government Bond Index, and the Lipper Short/Intermediate U.S. Government Objective(1) [LINE GRAPHIC OMITTED] PLOT POINTS ARE AS FOLLOWS: GOVERNMENT BOND FUND CNI Government CNI Government Lehman Intermediate Lipper Short/ Bond Fund Bond Fund U.S. Government Intermediate Institutional Class Shares Class A Shares Bond Index U.S. Government Objective 1/14/00 $10,000 $10,000 $10,000 $10,000 9/30/00 10,564 10,535 10,659 10,539 9/30/01 11,796 11,720 12,031 11,721 9/30/02 12,685 12,596 13,045 12,506 9/30/03 13,024 12,937 13,502 12,828 9/30/04 13,130 13,009 13,760 12,994 9/30/05 13,316 13,159 13,940 13,114 9/30/06 13,701 13,505 14,432 13,501 (1) The performance in the above graph does not reflect the deduction of taxes the shareholder will pay on Fund distributions or the redemptions of Fund shares. Investment performance reflects fee waivers in effect. In the absence of such waivers, total return would be reduced. Past performance is no indication of future performance. The Fund's comparative benchmarks do not include the annual operating expenses incurred by the Fund. Please note that one cannot invest directly in an unmanaged index. AVERAGE ANNUAL TOTAL RETURNS - ------------------------------------------------------------------------------- Ticker 1-Year 3-Year 5-Year Inception Shares Symbol Return Return Return to Date - ------------------------------------------------------------------------------- Institutional Class (1)^ CNBIX 2.89% 1.70% 3.04% 4.80% - ------------------------------------------------------------------------------- Class A (2) CGBAX 2.63% 1.44% 2.88% 4.58%+ - ------------------------------------------------------------------------------- (1) Commenced operations on January 14, 2000. (2) Commenced operations on April 13, 2000. ^ The Fund's Institutional Class Shares are currently offered only to accounts where City National Bank serves as trustee or in a fiduciary capacity. + Class A Shares performance for the period prior to April 13, 2000 reflects the performance of the Fund's Institutional Shares. The performance of the Institutional Shares has not been adjusted to reflect the higher Rule 12b-1 Fees and expenses applicable to Class A Shares. If it had, performance would have been lower than that shown. Top Ten Holdings % OF PORTFOLIO FNMA 7.125%, 06/15/10 11.6 FNMA 5.500%, 03/15/11 7.1 FNMA 5.000%, 01/23/09 6.7 FNMA 5.010%, 11/10/10 6.7 FHLB 6.200%, 03/22/21 5.4 FNMA 5.000%, 07/25/08 5.4 FHLMC REMIC, Ser R009, Cl AK 5.750%, 12/15/18 5.3 FHLB 4.375%, 09/17/10 5.3 FHLMC, Ser R004, Cl Al 5.125%, 12/15/13 5.2 FHLMC, Ser R003, Cl AG 5.125%, 10/15/15 5.0 CNI CHARTER FUNDS | PAGE 13 fund overview SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- CALIFORNIA TAX EXEMPT BOND FUND The Fund seeks to provide current income exempt from Federal and California state income tax (as the primary component of a total return strategy) by investing primarily in investment grade California municipal bonds and notes. - -------------------------------------------------------------------------------- Comparison of Change in the Value of a $10,000 Investment in the CNI California Tax Exempt Bond Fund, Institutional Class or Class A Shares, versus the Lehman CA Intermediate-Short Municipal Index, and the Lipper CA Short/Intermediate Municipal Debt Objective(1) [LINE GRAPHIC OMITTED] PLOT POINTS ARE AS FOLLOWS: CALIFORNIA TAX EXEMPT BOND FUND CNI California CNI California Lehman CA Lipper CA Short/ Tax-Exempt Bond Fund, Tax-Exempt Bond Fund, Intermediate-Short Intermediate Institutional Class Shares Class A Shares Municipal Index Municipal Debt Objective 1/14/00 $10,000 $10,000 $10,000 $10,000 9/30/00 10,545 10,532 10,545 10,460 9/30/01 11,305 11,278 11,403 11,165 9/30/02 12,162 12,112 12,272 11,850 9/30/03 12,482 12,399 12,633 12,104 9/30/04 12,731 12,627 12,999 12,287 9/30/05 12,941 12,803 13,250 12,632 9/30/06 13,353 13,163 13,677 13,011 (1) The performance in the above graph does not reflect the deduction of taxes the shareholder will pay on Fund distributions or the redemptions of Fund shares. Investment performance reflects fee waivers in effect. In the absence of such waivers, total return would be reduced. Past performance is no indication of future performance. The Fund's comparative benchmarks do not include the annual operating expenses incurred by the Fund. Please note that one cannot invest directly in an unmanaged index. AVERAGE ANNUAL TOTAL RETURNS - ------------------------------------------------------------------------------- Ticker 1-Year 3-Year 5-Year Inception Shares Symbol Return Return Return to Date - ------------------------------------------------------------------------------- Institutional Class (1)^ CNTIX 3.18% 2.28% 3.39% 4.40% - ------------------------------------------------------------------------------- Class A (2) CCTEX 2.81% 2.01% 3.14% 4.18%+ - ------------------------------------------------------------------------------- (1) Commenced operations on January 14, 2000. (2) Commenced operations on April 13, 2000. ^ The Fund's Institutional Class Shares are currently offered only to accounts where City National Bank serves as trustee or in a fiduciary capacity. + Class A Shares performance for the period prior to April 13, 2000 reflects the performance of the Fund's Institutional Shares. The performance of the Institutional Shares has not been adjusted to reflect the higher Rule 12b-1 Fees and expenses applicable to Class A Shares. If it had, performance would have been lower than that shown. Top Ten Holdings % OF PORTFOLIO San Diego, Unified School District, Election 1998 Project, Ser B-1, GO, MBIA 5.000%, 07/01/17 4.1 Escondido, Union School District, Refunding & Financing Project, COP, MBIA 4.750%, 07/01/19 2.9 California State, Public Works Board Lease, Department of Corrections-State Prisons Project, Ser A, RB, AMBAC 5.250%, 12/01/13 2.4 New York State, Ser E, RB 6.000%, 04/01/14 2.1 San Bernardino, Community College District, Election 2002 Project, Ser B, GO, MBIA 5.250%, 08/01/14 2.1 Sanger, Unified School District, Election 2006 Project, Ser A, GO, FSA 5.000%, 08/01/18 2.1 Arizona State, Transportation Board, GAN, Ser A, RB 5.000%, 07/01/13 2.0 San Diego County, Edgemoor & Regional Systems Projects, COP, AMBAC 5.000%, 02/01/18 2.0 Los Angeles, Water & Power Authority, Power Systems Project, Ser A, RB 5.000%, 07/01/08 1.9 Oakland, Redevelopment Agency, Central District Redevelopment Project, TA, AMBAC 5.500%, 02/01/14 1.9 CNI CHARTER FUNDS | PAGE 14 fund overview SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- HIGH YIELD BOND FUND The Fund seeks to maximize total return by investing primarily in fixed income securities rated below investment grade including corporate bonds and debentures, convertible and preferred securities, and zero coupon obligations. The Fund may also invest in fixed income securities rated below investment grade issued by governments and agencies, both U.S. and foreign, and in equity securities. The Fund seeks to invest in securities that offer a high current yield as well as total return potential and diversifies across issuers, industries and sectors to control risks. - ------------------------------------------------------------------------------- Comparison of Change in the Value of a $10,000 Investment in the CNI High Yield Bond Fund, Institutional Class or Class A Shares, versus the Citigroup High Yield Market Index and the Lipper High Current Yield Bond Funds Objective(1) [LINE GRAPHIC OMITTED] PLOT POINTS ARE AS FOLLOWS: HIGH YIELD BOND FUND CNI High Yield CNI High Yield Citigroup Lipper High Current Bond Fund, Bond Fund, High Yield Yield Bond Institutional Class Shares Class A Shares Market Index Funds Objective 1/14/00 $10,000 $10,000 $10,000 $10,000 9/30/00 10,420 10,394 9,974 9,882 9/30/01 10,165 10,109 9,373 9,058 9/30/02 10,653 10,563 9,059 8,900 9/30/03 12,757 12,611 12,073 11,142 9/30/04 14,348 14,142 13,586 12,401 9/30/05 15,044 14,784 14,468 13,155 9/30/06 16,082 15,757 15,536 14,035 (1) The performance in the above graph does not reflect the deduction of taxes the shareholder will pay on Fund distributions or the redemptions of Fund shares. Investment performance reflects fee waivers in effect. In the absence of such waivers, total return would be reduced. Past performance is no indication of future performance. The Fund's comparative benchmarks do not include the annual operating expenses incurred by the Fund. Please note that one cannot invest directly in an unmanaged index. AVERAGE ANNUAL TOTAL RETURNS - ------------------------------------------------------------------------------ Ticker 1-Year 3-Year 5-Year Inception Shares Symbol Return Return Return to Date - ------------------------------------------------------------------------------ Institutional Class (1)^ CHYIX 6.90% 8.03% 9.61% 7.33% - ------------------------------------------------------------------------------ Class A (1) CHBAX 6.58% 7.70% 9.28% 7.01% - ------------------------------------------------------------------------------ (1) Commenced operations on January 14, 2000. ^ The Fund's Institutional Class Shares are currently offered only to accounts where City National Bank serves as trustee or in a fiduciary capacity. Top Ten Holdings* % OF PORTFOLIO GMAC 6.750%, 12/01/14 1.6 General Motors 7.125%, 07/15/13 1.6 Qwest 7.625%, 06/15/15 1.4 Charter Communications Holdings 10.250%, 09/15/10 1.0 Smithfield Foods, Ser B 8.000%, 10/15/09 0.9 Ford Motor Credit 7.375%, 02/01/11 0.8 AES 9.000%, 05/15/15 0.8 Whiting Petroleum 7.000%, 02/01/14 0.7 Pogo Producing 6.875%, 10/01/17 0.7 El Paso 7.000%, 05/15/11 0.7 * Excludes cash equivalents CNI CHARTER FUNDS | PAGE 15 investment adviser's report SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- MONEY MARKET FUNDS The money market environment continued to change for most of this fiscal year ending September 30, 2006. The Federal Reserve Bank ("Fed") raised rates six times this period and has since been in a holding pattern for three consecutive meetings. Fed Funds target rate has been at 5.25% for over a quarter now and it seems poised to stay there for the remainder of 2006. Fed policy makers have been on a holding pattern as they weigh the mixed data on the economy. Inflation or core inflation remains at high levels, but the Fed is counting on the drop in oil prices and a slowdown in housing to help on this front. This of course remains to be seen. Until then, market participants are "data dependent" as we try to predict how long the Fed remains on hold and if the next move is up (because of high inflation) or down (because of a dramatic slowdown in economic growth coupled with declining inflation.) The CNI Charter Money Market Funds are enjoying higher yields after the Fed has moved short-term rates upward 17 times these past few years. We will maintain a conservative maturity posture until such a time we fear the Fed will reverse course and start cutting rates. The PRIME MONEY MARKET FUND continued to emphasize quality and liquidity in these uncertain times. With interest rates peaking above the 5.25% level in recent months -- higher than it's been in years, the average days to maturity have remained relatively short. This maturity allocation positions the Fund to perform competitively as 2007 approaches. The Fund has focused primarily on high-grade short-term commercial paper and corporate securities as well as government agency notes on the longer-end of the money market maturity spectrum. The GOVERNMENT MONEY MARKET FUND continued to be well-positioned from both a sector as well as maturity perspective. The maturity profile has incorporated a modified barbell strategy for most of the past fiscal year. This strategy has been beneficial over the past year as short rates have risen. This should also position the Fund to add value as short maturities continue to rise in 2006. The Fund's yield continued to be enhanced by the concentration of Government Agency securities over Treasury instruments. Our objective for the CALIFORNIA TAX EXEMPT MONEY MARKET FUND has always been safety and liquidity. Over the past fiscal year, prior historic budgetary challenges in California have given way to an improving credit profile for the state. Our stringent credit research effort remains the cornerstone to managing the Fund in the never-ending political/economic backdrop of Sacramento. The average days to maturity remains relatively short and our credit quality profile remains very high. STRATEGIC OUTLOOK Our outlook continues to be favorable for money market investments. Short-term rates will likely peak around these levels and move lower as we enter 2007. While a slowing economy is often synonymous with declining interest rates, many are uncertain of the Fed's next move due to the current high level of core inflation. Either way, we are near the peak of short-term rates and will extend out if the Fed changes its posture to one of easing. With the inverted yield curve in securities maturing under one year we maintain a shorter maturity stance for the CNI Charter Money Market Funds until the Fed changes its monetary policy. City National Asset Management, Inc. is monitoring the market very closely and will be proactive so as to take advantage of market opportunities. Sincerely, /s/ Rodney J. Olea Rodney J. Olea DIRECTOR OF FIXED INCOME CITY NATIONAL ASSET MANAGEMENT, INC. CNI CHARTER FUNDS | PAGE 16 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- LARGE CAP VALUE EQUITY FUND [THE FOLLOWING TABLE WAS REPRESENTED BY A BAR CHART IN THE PRINTED MATERIAL.] SECTOR WEIGHTINGS (UNAUDITED)*: 32.6% Financials 14.2% Industrials 8.9% Consumer Discretionary 8.7% Information Technology 7.9% Energy 6.6% Telecommunications 5.9% Utilities 4.8% Consumer Staples 4.6% Materials 4.2% Healthcare 1.6% Short-Term Investments * Percentages based on total investments. - -------------------------------------------------------------------------------- DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- COMMON STOCK [98.4%] AEROSPACE & DEFENSE [5.1%] Goodrich 16,400 $ 665 Honeywell International 21,200 867 Lockheed Martin 9,800 843 Northrop Grumman 17,000 1,157 Raytheon 15,200 730 United Technologies 17,500 1,109 ----------------------------------------------------------------------------- TOTAL AEROSPACE & DEFENSE 5,371 ============================================================================= AIR FREIGHT & LOGISTICS [0.7%] FedEx 6,800 739 ============================================================================= AUTO COMPONENTS [0.5%] Johnson Controls 6,800 488 ============================================================================= BEVERAGES [2.1%] Coca-Cola 27,100 1,211 Coca-Cola Enterprises 32,100 669 Molson Coors Brewing, Cl B 4,500 310 ----------------------------------------------------------------------------- TOTAL BEVERAGES 2,190 ============================================================================= CAPITAL MARKETS [6.5%] Bank of New York 11,600 409 Goldman Sachs Group 11,200 1,895 Lehman Brothers Holdings 15,000 1,108 Merrill Lynch 15,400 1,205 Morgan Stanley 27,000 1,968 State Street 5,200 324 ----------------------------------------------------------------------------- TOTAL CAPITAL MARKETS 6,909 ============================================================================= DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- CHEMICAL [2.6%] Dow Chemical 36,000 $ 1,404 PPG Industries 14,000 939 Rohm & Haas 8,600 407 ----------------------------------------------------------------------------- TOTAL CHEMICAL 2,750 ============================================================================= COMMERCIAL BANKS [7.7%] Keycorp 10,400 389 National City 16,100 589 PNC Financial Services Group 6,800 493 SunTrust Banks 6,300 487 US Bancorp 48,000 1,594 Wachovia 35,700 1,992 Wells Fargo 73,460 2,658 ----------------------------------------------------------------------------- TOTAL COMMERCIAL BANKS 8,202 ============================================================================= COMMERCIAL SERVICES & SUPPLIES [0.4%] Waste Management 11,600 425 ============================================================================= COMMUNICATIONS EQUIPMENT [2.6%] Motorola 64,300 1,607 Nokia, ADR 27,000 532 Qualcomm 9,800 356 Tellabs* 23,800 261 ----------------------------------------------------------------------------- TOTAL COMMUNICATIONS EQUIPMENT 2,756 ============================================================================= COMPUTERS & PERIPHERALS [3.5%] Apple Computer* 7,300 562 Hewlett-Packard 68,700 2,521 IBM 7,900 647 ----------------------------------------------------------------------------- TOTAL COMPUTERS & PERIPHERALS 3,730 ============================================================================= CONSUMER FINANCE [0.6%] Capital One Financial 8,300 653 ============================================================================= DIVERSIFIED FINANCIAL SERVICES [7.4%] Bank of America 70,396 3,771 CIT Group 14,500 705 Citigroup 67,786 3,367 ----------------------------------------------------------------------------- TOTAL DIVERSIFIED FINANCIAL SERVICES 7,843 ============================================================================= SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 17 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- LARGE CAP VALUE EQUITY FUND (CONTINUED) DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- DIVERSIFIED TELECOMMUNICATION SERVICES [5.7%] AT&T 47,300 $ 1,540 BellSouth 45,900 1,962 Verizon Communications 68,009 2,525 ----------------------------------------------------------------------------- TOTAL DIVERSIFIED TELECOMMUNICATION SERVICES 6,027 ============================================================================= ELECTRIC UTILITIES [3.1%] Edison International 13,900 579 Entergy 3,500 274 FirstEnergy 15,700 877 FPL Group 17,300 778 PPL 22,700 747 ----------------------------------------------------------------------------- TOTAL ELECTRIC UTILITIES 3,255 ============================================================================= FOOD & STAPLES RETAILING [1.6%] Costco Wholesale 16,200 805 Kroger 19,300 447 Safeway 16,000 485 ----------------------------------------------------------------------------- TOTAL FOOD & STAPLES RETAILING 1,737 ============================================================================= FOOD PRODUCTS [0.6%] Archer-Daniels-Midland 8,400 318 Tyson Foods 22,000 350 ----------------------------------------------------------------------------- TOTAL FOOD PRODUCTS 668 ============================================================================= HEALTH CARE PROVIDERS & SERVICES [2.3%] Aetna 22,100 874 Cigna 4,500 524 Health Management Associates, Cl A 27,000 564 McKesson 9,200 485 ----------------------------------------------------------------------------- TOTAL HEALTH CARE PROVIDERS & SERVICES 2,447 ============================================================================= HOUSEHOLD DURABLES [0.7%] Newell Rubbermaid 11,800 334 Whirlpool 5,200 438 ----------------------------------------------------------------------------- TOTAL HOUSEHOLD DURABLES 772 ============================================================================= INDEPEDENT POWER PRODUCER/ ENERGY TRADER [0.8%] Constellation Energy Group 13,400 793 ============================================================================= DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- INDUSTRIAL CONGLOMERATES [3.4%] General Electric 52,500 $ 1,853 Tyco International 61,600 1,724 ----------------------------------------------------------------------------- TOTAL INDUSTRIAL CONGLOMERATES 3,577 ============================================================================= INSURANCE [8.2%] ACE 17,800 974 Aflac 18,800 860 American International Group 29,100 1,928 Chubb 16,600 863 Hartford Financial Services Group 12,300 1,067 Metlife 17,100 969 Prudential Financial 9,700 740 St Paul Travelers 27,000 1,266 ----------------------------------------------------------------------------- TOTAL INSURANCE 8,667 ============================================================================= IT SERVICES [1.1%] Electronic Data Systems 39,900 978 First Data 5,500 231 ----------------------------------------------------------------------------- TOTAL IT SERVICES 1,209 ============================================================================= LEISURE EQUIPMENT & PRODUCTS [0.4%] Mattel 18,500 364 ============================================================================= LIFE SCIENCES TOOLS & SERVICES [0.4%] PerkinElmer 23,700 449 ============================================================================= MACHINERY [2.2%] Caterpillar 14,300 941 Danaher 7,000 481 Deere 7,400 621 Illinois Tool Works 7,000 314 ----------------------------------------------------------------------------- TOTAL MACHINERY 2,357 ============================================================================= MEDIA [4.9%] CBS, Cl B 25,750 725 Comcast, Cl A* 34,800 1,282 News Corp., Cl A 25,000 491 Time Warner 65,300 1,191 Walt Disney 47,900 1,481 ----------------------------------------------------------------------------- TOTAL MEDIA 5,170 ============================================================================= SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 18 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- LARGE CAP VALUE EQUITY FUND (CONTINUED) DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- METALS & MINING [1.2%] Alcoa 31,300 $ 878 Phelps Dodge 5,200 440 ----------------------------------------------------------------------------- TOTAL METALS & MINING 1,318 ============================================================================= MULTI-UTILITIES & UNREGULATED POWER [2.0%] Dominion Resources 11,700 895 PG&E 19,600 816 Sempra Energy 8,600 432 ----------------------------------------------------------------------------- TOTAL MULTI-UTILITIES & UNREGULATED POWER 2,143 ============================================================================= MULTILINE RETAIL [1.5%] Federated Department Stores 23,400 1,011 JC Penney 8,000 547 ----------------------------------------------------------------------------- TOTAL MULTILINE RETAIL 1,558 ============================================================================= OFFICE ELECTRONICS [0.6%] Xerox* 43,500 677 ============================================================================= OIL & GAS [7.9%] Chevron 23,040 1,494 ConocoPhillips 28,380 1,690 Exxon Mobil 42,100 2,825 Hess 7,800 323 Marathon Oil 14,800 1,138 Occidental Petroleum 18,400 885 ----------------------------------------------------------------------------- TOTAL OIL & GAS 8,355 ============================================================================= PAPER & FOREST PRODUCTS [0.8%] International Paper 24,500 848 ============================================================================= PERSONAL PRODUCTS [0.5%] Alberto-Culver 10,500 531 ============================================================================= PHARMACEUTICALS [1.4%] Abbott Laboratories 16,000 777 Bristol-Myers Squibb 29,400 733 ----------------------------------------------------------------------------- TOTAL PHARMACEUTICALS 1,510 ============================================================================= DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- ROAD & RAIL [2.4%] Avis Budget Group* 2,330 $ 43 CSX 31,400 1,031 Norfolk Southern 17,800 784 Ryder System 9,300 481 Union Pacific 2,800 246 ----------------------------------------------------------------------------- TOTAL ROAD & RAIL 2,585 ============================================================================= SEMICONDUCTORS & SEMICONDUCTOR EQUIPMENT [0.8%] Freescale Semiconductor* 13,000 494 Texas Instruments 11,000 366 ----------------------------------------------------------------------------- TOTAL SEMICONDUCTORS & SEMICONDUCTOR EQUIPMENT 860 ============================================================================= SPECIALTY RETAIL [1.1%] Gap 41,000 777 Officemax 8,500 346 ----------------------------------------------------------------------------- TOTAL SPECIALTY RETAIL 1,123 ============================================================================= THRIFTS & MORTGAGE FINANCE [2.1%] Fannie Mae 19,900 1,113 Washington Mutual 26,200 1,139 ----------------------------------------------------------------------------- TOTAL THRIFTS & MORTGAGE FINANCE 2,252 ============================================================================= WIRELESS TELECOMMUNICATION SERVICES [1.0%] Alltel 10,600 588 Sprint-Nextel 24,300 417 ----------------------------------------------------------------------------- TOTAL WIRELESS TELECOMMUNICATION SERVICES 1,005 ============================================================================= TOTAL COMMON STOCK (Cost $87,095) 104,313 ========================================================================= SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 19 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- LARGE CAP VALUE EQUITY FUND (CONCLUDED) DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- CASH EQUIVALENTS [1.6%] Fidelity Institutional Domestic Money Market Portfolio, Cl I, 5.22%** 1,714,571 $ 1,715 SEI Daily Income Trust, Prime Obligation Fund, Cl A, 5.33%** 10,815 11 ----------------------------------------------------------------------------- TOTAL CASH EQUIVALENTS (Cost $1,726) 1,726 ========================================================================= TOTAL INVESTMENTS [100.0%] (Cost $88,821) 106,039 ========================================================================= OTHER ASSETS AND LIABILITIES [0.0%] 11 ========================================================================= NET ASSETS -- 100.0% $ 106,050 ============================================================================= * NON-INCOME PRODUCING SECURITY ** RATE SHOWN IS THE 7-DAY EFFECTIVE YIELD AS OF SEPTEMBER 30, 2006. ADR -- AMERICAN DEPOSITARY RECEIPT CL -- CLASS SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 20 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- LARGE CAP GROWTH EQUITY FUND [THE FOLLOWING TABLE WAS REPRESENTED BY A BAR CHART IN THE PRINTED MATERIAL.] SECTOR WEIGHTINGS (UNAUDITED)*: 21.6% Information Technology 21.2% Healthcare 14.3% Consumer Staples 11.1% Consumer Discretionary 10.9% Financials 10.4% Energy 7.2% Industrials 1.5% Short-Term Investments 0.9% Materials 0.7% Utilities 0.2% Telecommunications * Percentages based on total investments. - -------------------------------------------------------------------------------- DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- COMMON STOCK [98.1%] AEROSPACE & DEFENSE [0.4%] L-3 Communications Holdings 2,500 $ 196 ============================================================================= AIR FREIGHT & LOGISTICS [0.9%] United Parcel Service, Cl B 5,700 410 ============================================================================= BEVERAGES [3.4%] Coca-Cola 9,800 438 Pepsi Bottling Group 5,700 202 PepsiCo 14,500 946 ----------------------------------------------------------------------------- TOTAL BEVERAGES 1,586 ============================================================================= BIOTECHNOLOGY [5.1%] Amgen* 14,300 1,023 Genzyme-General Division* 6,500 439 Gilead Sciences* 12,700 872 ----------------------------------------------------------------------------- TOTAL BIOTECHNOLOGY 2,334 ============================================================================= CAPITAL MARKETS [4.1%] Franklin Resources 2,100 222 Goldman Sachs Group 2,600 440 Lehman Brothers Holdings 4,800 355 Merrill Lynch 2,600 203 State Street 5,400 337 T Rowe Price Group 7,000 335 ----------------------------------------------------------------------------- TOTAL CAPITAL MARKETS 1,892 ============================================================================= COMMERCIAL BANKS [0.5%] Synovus Financial 8,300 244 ============================================================================= DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- COMMERCIAL SERVICES & SUPPLIES [1.4%] Equifax 7,000 $ 257 Robert Half International 5,200 176 RR Donnelley & Sons 6,300 208 ----------------------------------------------------------------------------- TOTAL COMMERCIAL SERVICES & SUPPLIES 641 ============================================================================= COMMUNICATIONS EQUIPMENT [3.3%] Cisco Systems* 29,250 673 Corning* 9,500 232 Qualcomm 17,000 618 ----------------------------------------------------------------------------- TOTAL COMMUNICATIONS EQUIPMENT 1,523 ============================================================================= COMPUTERS & PERIPHERALS [3.8%] Apple Computer* 8,100 624 Dell* 17,165 392 IBM 9,000 737 ----------------------------------------------------------------------------- TOTAL COMPUTERS & PERIPHERALS 1,753 ============================================================================= CONSUMER FINANCE [1.6%] Capital One Financial 5,200 409 SLM 6,400 333 ----------------------------------------------------------------------------- TOTAL CONSUMER FINANCE 742 ============================================================================= DIVERSIFIED FINANCIAL SERVICES [0.3%] Chicago Mercantile Exchange Holdings 250 120 ============================================================================= ENERGY EQUIPMENT & SERVICES [3.5%] BJ Services 14,100 425 Nabors Industries* 12,200 363 Schlumberger 7,800 484 Transocean* 4,900 358 ----------------------------------------------------------------------------- TOTAL ENERGY EQUIPMENT & SERVICES 1,630 ============================================================================= FOOD & STAPLES RETAILING [3.5%] Sysco 16,100 538 Wal-Mart Stores 21,975 1,084 ----------------------------------------------------------------------------- TOTAL FOOD & STAPLES RETAILING 1,622 ============================================================================= FOOD PRODUCTS [1.2%] General Mills 4,300 243 Kellogg 6,200 307 ----------------------------------------------------------------------------- TOTAL FOOD PRODUCTS 550 ============================================================================= SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 21 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- LARGE CAP GROWTH EQUITY FUND (CONTINUED) DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- HEALTH CARE EQUIPMENT & SUPPLIES [3.8%] Bard (C.R.) 3,200 $ 240 Biomet 10,900 351 Boston Scientific* 8,400 124 Stryker 12,800 635 Zimmer Holdings* 6,200 419 ----------------------------------------------------------------------------- TOTAL HEALTH CARE EQUIPMENT & SUPPLIES 1,769 ============================================================================= HEALTH CARE PROVIDERS & SERVICES [4.5%] Caremark Rx 12,900 731 Coventry Health Care* 4,200 217 Quest Diagnostics 5,400 330 UnitedHealth Group 15,800 777 ----------------------------------------------------------------------------- TOTAL HEALTH CARE PROVIDERS & SERVICES 2,055 ============================================================================= HEALTH CARE TECHNOLOGY [0.4%] IMS Health 7,500 200 ============================================================================= HOTELS, RESTAURANTS & LEISURE [2.3%] Carnival 6,600 310 Starbucks* 9,500 324 Wyndham Worldwide* 1,660 46 Yum! Brands 7,400 385 ----------------------------------------------------------------------------- TOTAL HOTELS, RESTAURANTS & LEISURE 1,065 ============================================================================= HOUSEHOLD DURABLES [0.4%] Harman International Industries 2,200 184 ============================================================================= HOUSEHOLD PRODUCTS [5.5%] Colgate-Palmolive 10,100 628 Procter & Gamble 26,302 1,630 Clorox 4,400 277 ----------------------------------------------------------------------------- TOTAL HOUSEHOLD PRODUCTS 2,535 ============================================================================= INDEPENDENT POWER PRODUCER/ ENERGY TRADER [0.7%] TXU 5,200 325 ============================================================================= INDUSTRIAL CONGLOMERATES [3.3%] 3M 6,000 446 General Electric 31,075 1,097 ----------------------------------------------------------------------------- TOTAL INDUSTRIAL CONGLOMERATES 1,543 ============================================================================= DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- INSURANCE [2.7%] Aflac 6,600 $ 302 American International Group 11,500 762 Progressive 8,000 196 ----------------------------------------------------------------------------- TOTAL INSURANCE 1,260 ============================================================================= INTERNET SOFTWARE & SERVICES [2.9%] eBay* 26,800 760 Yahoo!* 22,500 569 ----------------------------------------------------------------------------- TOTAL INTERNET SOFTWARE & SERVICES 1,329 ============================================================================= IT SERVICES [1.0%] First Data 7,100 298 Paychex 4,800 177 ----------------------------------------------------------------------------- TOTAL IT SERVICES 475 ============================================================================= LIFE SCIENCES TOOLS & SERVICES [0.6%] Thermo Electron* 7,100 279 ============================================================================= MACHINERY [1.1%] Danaher 7,600 522 ============================================================================= MEDIA [1.9%] Comcast* 8,100 299 McGraw-Hill 5,400 313 Time Warner 13,100 239 ----------------------------------------------------------------------------- TOTAL MEDIA 851 ============================================================================= METALS & MINING [0.9%] Goldcorp 9,000 212 Nucor 4,200 208 ----------------------------------------------------------------------------- TOTAL METALS & MINING 420 ============================================================================= MULTILINE RETAIL [1.8%] Sears Holdings* 2,700 427 Target 7,500 414 ----------------------------------------------------------------------------- TOTAL MULTILINE RETAIL 841 ============================================================================= OIL & GAS [6.8%] Chevron 3,800 247 Exxon Mobil 32,000 2,147 Sunoco 4,200 261 XTO Energy 11,300 476 ----------------------------------------------------------------------------- TOTAL OIL & GAS 3,131 ============================================================================= SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 22 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- LARGE CAP GROWTH EQUITY FUND (CONCLUDED) DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- PERSONAL PRODUCTS [0.6%] Avon Products 8,600 $ 264 ============================================================================= PHARMACEUTICALS [6.8%] Abbott Laboratories 4,795 233 Allergan 3,700 417 Forest Laboratories* 7,700 390 Johnson & Johnson 16,664 1,082 Schering-Plough 14,000 309 Wyeth 13,850 704 ----------------------------------------------------------------------------- TOTAL PHARMACEUTICALS 3,135 ============================================================================= REAL ESTATE INVESTMENT TRUST [0.9%] Simon Property Group 4,700 426 ============================================================================= REAL ESTATE MANAGEMENT & DEVELOPMENT [0.1%] Realogy* 2,075 47 ============================================================================= ROAD & RAIL [0.0%] Avis Budget Group* 830 15 ============================================================================= SEMICONDUCTORS & SEMICONDUCTOR EQUIPMENT [3.4%] Broadcom, Cl A* 11,850 360 Intel 12,350 254 Linear Technology 11,700 364 Texas Instruments 17,800 592 ----------------------------------------------------------------------------- TOTAL SEMICONDUCTORS & SEMICONDUCTOR EQUIPMENT 1,570 ============================================================================= SOFTWARE [7.1%] Autodesk* 9,800 341 Citrix Systems* 7,100 257 Electronic Arts* 3,600 200 Microsoft 49,830 1,362 Oracle* 22,500 399 Symantec* 34,400 732 ----------------------------------------------------------------------------- TOTAL SOFTWARE 3,291 ============================================================================= SPECIALTY RETAIL [3.4%] Best Buy 3,500 187 Home Depot 18,300 664 Lowe's 17,600 494 TJX 8,600 241 ----------------------------------------------------------------------------- TOTAL SPECIALTY RETAIL 1,586 ============================================================================= DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- TEXTILES, APPAREL & LUXURY GOODS [1.3%] Coach* 17,300 $ 595 ============================================================================= THRIFTS & MORTGAGE FINANCE [0.7%] Countrywide Financial 8,600 301 ============================================================================= WIRELESS TELECOMMUNICATION SERVICES [0.2%] Sprint-Nextel 4,309 74 ============================================================================= TOTAL COMMON STOCK (Cost $41,212) 45,331 ========================================================================= CASH EQUIVALENTS [1.5%] Fidelity Institutional Domestic Money Market Portfolio, Cl I, 5.22%** 656,508 657 SEI Daily Income Trust, Prime Obligation Fund, Cl A, 5.33%** 25,272 25 ----------------------------------------------------------------------------- TOTAL CASH EQUIVALENTS (Cost $682) 682 ========================================================================= TOTAL INVESTMENTS [99.6%] (Cost $41,894) 46,013 ========================================================================= OTHER ASSETS AND LIABILITIES [ 0.4%] 192 ========================================================================= NET ASSETS -- 100.0% $ 46,205 ============================================================================= * NON-INCOME PRODUCING SECURITY ** RATE SHOWN IS THE 7-DAY EFFECTIVE YIELD AS OF SEPTEMBER 30, 2006. CL -- CLASS SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 23 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- RCB SMALL CAP VALUE FUND [THE FOLLOWING TABLE WAS REPRESENTED BY A BAR CHART IN THE PRINTED MATERIAL.] SECTOR WEIGHTINGS (UNAUDITED)*: 34.2% Financials 23.3% Consumer Discretionary 13.4% Industrials 12.2% Consumer Staples 4.9% Energy 4.4% Short-Term Investment 3.6% Utilities 2.4% Materials 1.6% Information Technology * Percentages based on total investments. - -------------------------------------------------------------------------------- DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- COMMON STOCK+ [92.7%] BROADCASTING & CABLE [6.5%] Cox Radio* 161,250 $ 2,475 Cumulus Media* 218,600 2,090 ----------------------------------------------------------------------------- TOTAL BROADCASTING & CABLE 4,565 ============================================================================= COMMERCIAL SERVICES [7.1%] Adesa 58,000 1,340 Coinstar* 65,600 1,888 Watson Wyatt 42,000 1,719 ----------------------------------------------------------------------------- TOTAL COMMERCIAL SERVICES 4,947 ============================================================================= DIVERSIFIED MANUFACTURING [4.1%] Jacuzzi Brands* 283,300 2,830 ============================================================================= DIVERSIFIED METALS & MINING [2.4%] Compass Minerals International 59,000 1,670 ============================================================================= UTILITIES [3.6%] Sierra Pacific Resources* 174,000 2,495 ============================================================================= ENERGY EQUIPMENT & SERVICES [2.1%] Hanover Compressor* 79,200 1,443 ============================================================================= ENTERTAINMENT [7.3%] Lodgenet Entertainment* 270,000 5,098 ============================================================================= FOOD, BEVERAGE & TOBACCO [4.3%] Ralcorp Holdings* 62,400 3,010 ============================================================================= DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- HOUSEHOLD PRODUCTS [3.1%] Central Garden & Pet* 45,100 $ 2,176 ============================================================================= INSURANCE [27.5%] Alleghany* 12,218 3,531 Conseco* 140,000 2,939 Hilb Rogal & Hobbs 38,900 1,659 Montpelier Re Holdings 152,450 2,956 Odyssey Re Holdings 58,000 1,959 USI Holdings* 226,200 3,065 White Mountains Insurance Group 6,200 3,081 ----------------------------------------------------------------------------- TOTAL INSURANCE 19,190 ============================================================================= MACHINERY [2.0%] IDEX 31,800 1,369 ============================================================================= OIL & GAS [2.8%] Rosetta Resources* 114,200 1,961 ============================================================================= PREPACKAGING SOFTWARE [1.6%] PLATO Learning* 175,300 1,117 ============================================================================= REAL ESTATE INVESTMENT TRUST [4.2%] Annaly Mortgage Management 225,100 2,958 ============================================================================= RETAIL [10.6%] IHOP 33,170 1,538 Smart & Final* 194,600 3,322 Triarc, Cl B 169,800 2,567 ----------------------------------------------------------------------------- TOTAL RETAIL 7,427 ============================================================================= SPECIALTY RETAIL [3.5%] Jo-Ann Stores* 144,100 2,409 ============================================================================= TOTAL COMMON STOCK (Cost $51,933) 64,665 ========================================================================= SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 24 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- RCB SMALL CAP VALUE FUND (CONCLUDED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- CORPORATE BONDS [2.6%] FINANCIAL SERVICES [2.3%] Fairfax Financial Holding 7.750%, 04/26/12 $ 600 $ 558 Labranche (A) Callable 05/15/07 @ 104.75 9.500%, 05/15/09 1,000 1,043 ----------------------------------------------------------------------------- TOTAL FINANCIAL SERVICES 1,601 ============================================================================= LABORATORY EQUIPMENT [0.3%] Sea Containers, Ser B 10.750%, 10/15/06 250 200 ============================================================================= TOTAL CORPORATE BONDS (Cost $1,828) 1,801 ========================================================================= REPURCHASE AGREEMENT (B) [4.4%] Morgan Stanley, 5.000%, dated 09/29/06, repurchased on 10/02/06, repurchase price $3,054,731 (collateralized by a U.S. Treasury Note, par value $2,919,831, 6.500%, 2/15/10; with total market value $3,114,578) 3,053 3,053 ----------------------------------------------------------------------------- TOTAL REPURCHASE AGREEMENT (Cost $3,053) 3,053 ========================================================================= TOTAL INVESTMENTS [99.7%] (Cost $56,814) 69,519 ========================================================================= OTHER ASSETS AND LIABILITIES [0.3%] 222 ========================================================================= NET ASSETS -- 100.0% $ 69,741 ============================================================================= DESCRIPTION * NON-INCOME PRODUCING SECURITY + MORE NARROW INDUSTRIES ARE UTILIZED FOR COMPLIANCE PURPOSES, WHEREAS BROAD SECTORS ARE UTILIZED FOR REPORTING. (A) SECURITY EXEMPT FROM REGISTRATION UNDER RULE 144A OF THE SECURITIES ACT OF 1933. THESE SECURITIES MAY BE RESOLD IN TRANSACTIONS EXEMPT FROM REGISTRATION NORMALLY TO QUALIFIED INSTITUTIONS. ON SEPTEMBER 30, 2006, THE VALUE OF THESE SECURITIES AMOUNTED TO $1,043 (000), REPRESENTING 1.5% OF THE NET ASSETS OF THE FUND. (B) TRI-PARTY REPURCHASE AGREEMENT CL -- CLASS SER -- SERIES SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 25 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- TECHNOLOGY GROWTH FUND [THE FOLLOWING TABLE WAS REPRESENTED BY A BAR CHART IN THE PRINTED MATERIAL.] SECTOR WEIGHTINGS (UNAUDITED)*: 94.6% Information Technology 2.2% Short-Term Investments 1.5% Industrials 1.3% Healthcare 0.4% Consumer Discretionary * Percentages based on total investments. - -------------------------------------------------------------------------------- DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- COMMON STOCK [97.8%] AUDIO & VIDEO EQUIPMENT MANUFACTURING [0.4%] Sony, ADR 300 $ 12 ============================================================================= COMMUNICATIONS EQUIPMENT MANUFACTURING [12.8%] Cisco Systems* 4,705 108 Harris 700 31 Motorola 2,725 68 Nokia, ADR 2,150 42 Qualcomm 2,600 95 ----------------------------------------------------------------------------- TOTAL COMMUNICATIONS EQUIPMENT MANUFACTURING 344 ============================================================================= COMPUTER & PERIPHERAL EQUIPMENT MANUFACTURING [19.3%] Apple Computer* 995 77 Dell* 1,525 35 EMC-Mass* 4,505 54 Hewlett-Packard 3,823 140 IBM 1,400 115 NAVTEQ* 400 10 Sandisk* 400 21 Symbol Technologies 2,250 33 Western Digital* 1,750 32 ----------------------------------------------------------------------------- TOTAL COMPUTER & PERIPHERAL EQUIPMENT MANUFACTURING 517 ============================================================================= COMPUTER SYSTEMS DESIGN & RELATED SERVICES [8.6%] Autodesk* 800 28 Cerner* 400 18 Cognizant Technology Solutions, Cl A* 800 59 Electronic Data Systems 1,725 42 Intergraph* 275 12 Jack Henry & Associates 1,100 24 DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- Micros Systems* 300 $ 15 Parametric Technology* 950 16 Quest Software* 1,100 16 ----------------------------------------------------------------------------- TOTAL COMPUTER SYSTEMS DESIGN & RELATED SERVICES 230 ============================================================================= DATA PROCESSING SERVICES [2.2%] Affiliated Computer Services, Cl A* 425 22 First Data 850 36 ----------------------------------------------------------------------------- TOTAL DATA PROCESSING SERVICES 58 ============================================================================= ELECTRONIC SHOPPING & MAIL-ORDER HOUSES [0.8%] eBay* 725 21 ============================================================================= FIBER OPTIC CABLE MANUFACTURING [1.8%] Corning* 2,000 49 ============================================================================= NAVIGATIONAL/MEASURING/MEDICAL/CONTROL INSTRUMENTS MANUFACTURING [2.5%] Flir Systems* 400 11 L-3 Communications Holdings 500 39 PerkinElmer 875 17 ----------------------------------------------------------------------------- TOTAL NAVIGATIONAL/MEASURING/MEDICAL/ CONTROL INSTRUMENTS MANUFACTURING 67 ============================================================================= ON-LINE INFORMATION SERVICES [5.4%] Google* 95 38 Juniper Networks* 1,092 19 WebEx Communications* 1,125 44 Websense* 700 15 Yahoo!* 1,200 30 ----------------------------------------------------------------------------- TOTAL ON-LINE INFORMATION SERVICES 146 ============================================================================= SEMICONDUCTOR & OTHER ELECTRONIC COMPONENT MANUFACTURING [18.9%] Amphenol, Cl A 500 31 Analog Devices 825 24 Applied Materials 800 14 Arrow Electronics* 500 14 Broadcom, Cl A* 1,200 37 Intel 4,950 102 Jabil Circuit 850 24 SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 26 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- TECHNOLOGY GROWTH FUND (CONCLUDED) DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- Linear Technology 775 $ 24 Marvel Tech Group* 1,200 23 Maxim Integrated Products 900 25 Micron Technology* 750 13 National Semiconductor 475 11 Taiwan Semiconductor Manufacturing, ADR 3,394 33 Texas Instruments 2,900 97 TTM Technologies* 850 10 Xilinx 700 15 Zoran* 600 10 ----------------------------------------------------------------------------- TOTAL SEMICONDUCTOR & OTHER ELECTRONIC COMPONENT MANUFACTURING 507 ============================================================================= SOFTWARE PUBLISHERS [23.6%] Adobe Systems* 1,000 37 Akamai Technologies* 1,000 50 BEA Systems* 1,400 21 Citrix Systems* 1,175 43 Electronic Arts* 400 22 F5 Networks* 350 19 Intuit* 400 13 McAfee* 975 24 Microsoft 7,850 215 Oracle* 4,765 84 Red Hat* 500 11 SAP, ADR 250 12 Symantec* 3,300 70 VeriSign* 550 11 ----------------------------------------------------------------------------- TOTAL SOFTWARE PUBLISHERS 632 ============================================================================= TELECOMMUNICATIONS [1.5%] Amdocs* 1,000 40 ============================================================================= TOTAL COMMON STOCK (Cost $2,431) 2,623 ========================================================================= DESCRIPTION SHARES VALUE (000) - -------------------------------------------------------------------------------- CASH EQUIVALENTS [2.2%] Fidelity Institutional Domestic Money Market Portfolio, Cl I, 5.22%** 51,456 $ 51 SEI Daily Income Trust, Prime Obligation Fund, Cl A, 5.33%** 8,009 8 ============================================================================= TOTAL CASH EQUIVALENTS (Cost $59) 59 ========================================================================= TOTAL INVESTMENTS [100.0%] (Cost $2,490) 2,682 ========================================================================= OTHER ASSETS AND LIABILITIES [0.0%] -- ========================================================================= NET ASSETS -- 100.0% $ 2,682 ============================================================================= * NON-INCOME PRODUCING SECURITY ** RATE SHOWN IS THE 7-DAY EFFECTIVE YIELD AS OF SEPTEMBER 30, 2006. ADR -- AMERICAN DEPOSITARY RECEIPT CL -- CLASS AMOUNTS DESIGNATED AS "--" ARE EITHER $0 OR HAVE BEEN ROUNDED TO $0. SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 27 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- CORPORATE BOND FUND [THE FOLLOWING TABLE WAS REPRESENTED BY A BAR CHART IN THE PRINTED MATERIAL.] SECTOR WEIGHTINGS (UNAUDITED)*: 38.9% Financial 25.6% Industrial 7.4% Telephone 7.3% Bank 5.4% U.S. Government Mortgage-Backed Obligations 3.2% Short-Term Investments 3.0% Utilities 2.6% Commercial Paper 1.9% U.S. Treasury Obligations 1.8% Municipal Bonds 1.1% Gas Transmission 0.8% Foreign Governments 0.7% Mortgage-Backed 0.3% Transportation * Percentages based on total investments. - -------------------------------------------------------------------------------- DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- CORPORATE BONDS [85.0%] AIR TRANSPORTATION [0.3%] Federal Express, Ser A2 7.890%, 09/23/08 $ 165 $ 168 ============================================================================= AUTOMOTIVE [2.7%] DaimlerChrysler 5.875%, 03/15/11 570 571 Toyota Motor Credit 4.250%, 03/15/10 1,000 971 ----------------------------------------------------------------------------- TOTAL AUTOMOTIVE 1,542 ============================================================================= BANKS [8.4%] Bankers Trust 7.250%, 10/15/11 500 546 Crestar Finance 6.500%, 01/15/08 1,035 1,054 Deutsche Bank 7.500%, 04/25/09 500 526 Union Planters Bank 5.125%, 06/15/07 1,215 1,214 US Bancorp 6.875%, 09/15/07 350 354 Wachovia 7.125%, 10/15/06 100 100 Wells Fargo 4.625%, 08/09/10 1,000 984 ----------------------------------------------------------------------------- TOTAL BANKS 4,778 ============================================================================= BEAUTY PRODUCTS [1.5%] Avon Products 7.150%, 11/15/09 800 844 ============================================================================= DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- CHEMICALS [0.4%] Praxair 6.625%, 10/15/07 $ 200 $ 202 ============================================================================= COMMUNICATION & MEDIA [4.5%] AOL Time Warner 6.750%, 04/15/11 395 413 Comcast Cable Communications Holdings 8.375%, 03/15/13 440 502 News America Holdings 9.250%, 02/01/13 450 532 Walt Disney 5.700%, 07/15/11 1,100 1,121 ----------------------------------------------------------------------------- TOTAL COMMUNICATION & MEDIA 2,568 ============================================================================= COMPUTER SYSTEM DESIGN & SERVICES [3.3%] Cisco Systems 5.500%, 02/22/16 1,000 1,008 IBM 4.375%, 06/01/09 900 885 ----------------------------------------------------------------------------- TOTAL COMPUTERS SYSTEM DESIGN & SERVICES 1,893 ============================================================================= DRUGS [1.8%] Abbott Laboratories 5.375%, 05/15/09 1,000 1,009 ============================================================================= ELECTRICAL SERVICES [3.1%] American Electric Power 5.250%, 06/01/15 490 477 Iowa Electric Light & Power 6.000%, 10/01/08 200 202 WPS Resources 7.000%, 11/01/09 1,000 1,047 ----------------------------------------------------------------------------- TOTAL ELECTRICAL SERVICES 1,726 ============================================================================= FINANCIAL SERVICES [16.7%] American General Finance, Ser I, MTN 4.625%, 05/15/09 1,000 983 CIT Group, MTN 4.750%, 12/15/10 1,000 978 Citigroup 5.850%, 08/02/16 1,000 1,034 Countrywide Home Loans 5.625%, 07/15/09 155 156 SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 28 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- CORPORATE BOND FUND (CONTINUED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Countrywide Home Loans, Ser L, MTN 4.000%, 03/22/11 $ 875 $ 826 General Electric Capital, Ser A, MTN 6.875%, 11/15/10 250 266 6.000%, 06/15/12 1,500 1,559 HSBC Finance 5.250%, 04/15/15 1,000 985 John Deere Capital 4.625%, 04/15/09 750 740 MBNA 4.625%, 09/15/08 410 405 National Rural Utilities, Ser C, MTN 7.250%, 03/01/12 1,000 1,093 Washington Mutual 4.625%, 04/01/14 460 429 ----------------------------------------------------------------------------- TOTAL FINANCIAL SERVICES 9,454 ============================================================================= FOOD, BEVERAGE & TOBACCO [4.2%] Bottling Group 5.500%, 04/01/16 1,000 1,007 Diageo Capital 3.375%, 03/20/08 1,000 974 General Mills 2.625%, 10/24/06 410 409 ----------------------------------------------------------------------------- TOTAL FOOD, BEVERAGE & TOBACCO 2,390 ============================================================================= FOREIGN GOVERNMENTS [0.8%] United Mexican States 5.875%, 01/15/14 450 460 ============================================================================= INSURANCE [5.5%] Aflac 6.500%, 04/15/09 1,000 1,031 AXA Financial 7.750%, 08/01/10 1,000 1,084 Berkshire Hathaway Finance 4.125%, 01/15/10 1,000 972 ----------------------------------------------------------------------------- TOTAL INSURANCE 3,087 ============================================================================= INVESTMENT BANKER/BROKER DEALER [12.3%] Credit Suisse 5.500%, 08/15/13 1,000 1,009 Goldman Sachs Group 5.150%, 01/15/14 1,000 978 Jefferies Group 5.500%, 03/15/16 665 649 DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- JPMorgan Chase 7.125%, 06/15/09 $ 675 $ 709 6.750%, 02/01/11 500 530 Lehman Brothers Holdings 8.250%, 06/15/07 1,100 1,122 Merrill Lynch 4.000%, 11/15/07 1,000 986 Morgan Stanley 3.875%, 01/15/09 1,000 973 ----------------------------------------------------------------------------- TOTAL INVESTMENT BANKER/BROKER DEALER 6,956 ============================================================================= PETROLEUM & FUEL PRODUCTS [2.0%] Chevron 8.625%, 06/30/10 200 225 ConocoPhillips 6.375%, 03/30/09 305 314 Duke Capital 5.500%, 03/01/14 625 614 ----------------------------------------------------------------------------- TOTAL PETROLEUM & FUEL PRODUCTS 1,153 ============================================================================= REAL ESTATE INVESTMENT TRUSTS [1.9%] Kimco Realty, MTN 6.960%, 07/16/07 1,000 1,011 Kimco Realty, Ser B, MTN 7.860%, 11/01/07 67 68 ----------------------------------------------------------------------------- TOTAL REAL ESTATE INVESTMENT TRUSTS 1,079 ============================================================================= RETAIL [7.0%] Kohl's 6.300%, 03/01/11 1,000 1,037 Kroger 5.500%, 02/01/13 450 444 McDonald's, Ser E, MTN 4.240%, 12/13/06 995 992 Target 5.875%, 07/15/16 500 518 Wal-Mart Stores 4.375%, 07/12/07 1,000 994 ----------------------------------------------------------------------------- TOTAL RETAIL 3,985 ============================================================================= TELEPHONES & TELECOMMUNICATIONS [7.5%] BellSouth 4.200%, 09/15/09 1,000 970 Deutsche Telekom International Finance 5.250%, 07/22/13 475 461 New Cingular Wireless Services 8.125%, 05/01/12 400 450 SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 29 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- CORPORATE BOND FUND (CONCLUDED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Southwestern Bell 6.625%, 07/15/07 $ 750 $ 757 Sprint Capital 8.375%, 03/15/12 550 616 Verizon Communications 5.550%, 02/15/16 1,000 987 ----------------------------------------------------------------------------- TOTAL TELEPHONES & TELECOMMUNICATIONS 4,241 ============================================================================= WASTE DISPOSAL [1.1%] Waste Management 6.875%, 05/15/09 575 597 ============================================================================= TOTAL CORPORATE BONDS (Cost $48,413) 48,132 ============================================================================= U.S. TREASURY OBLIGATION [1.9%] U.S. Treasury Inflation Index Note 2.000%, 01/15/14 1,101 1,080 ----------------------------------------------------------------------------- TOTAL U.S. TREASURY OBLIGATION (Cost $1,141) 1,080 ============================================================================= MUNICIPAL BONDS [1.8%] CALIFORNIA [1.8%] California Statewide, Community Development Authority, Ser A-2, RB, XLCA 4.000%, 11/15/06 75 75 City of Industry, Sales Tax Project, RB, MBIA 5.000%, 01/01/12 955 946 ----------------------------------------------------------------------------- TOTAL CALIFORNIA 1,021 ============================================================================= TOTAL MUNICIPAL BONDS (Cost $1,057) 1,021 ============================================================================= MORTGAGE-BACKED SECURITY [0.7%] Residential Asset Mortgage Products, Ser 2003-RS5, Cl AI4 3.700%, 09/25/31 393 387 ----------------------------------------------------------------------------- TOTAL MORTGAGE-BACKED SECURITY (Cost $388) 387 ========================================================================= DESCRIPTION FACE AMOUNT (000)/SHARES VALUE (000) - -------------------------------------------------------------------------------- U.S. GOVERNMENT MORTGAGE-BACKED OBLIGATIONS [5.5%] FHLMC, Ser 2982, Cl NB 5.500%, 02/15/29 $ 340 $ 341 FHLMC, Ser R004, Cl Al 5.125%, 12/15/13 1,238 1,228 FNMA CMO, Ser 2002-56, Cl MC 5.500%, 09/25/17 1,316 1,319 FNMA REMIC, Ser 2006, Cl AB 6.000%, 06/25/16 217 218 ----------------------------------------------------------------------------- TOTAL U.S. GOVERNMENT MORTGAGE-BACKED OBLIGATIONS (Cost $3,102) 3,106 ============================================================================= COMMERCIAL PAPER (A) [2.7%] ASSET BACKED SECURITIES [2.7%] Giro Balanced Funding 5.270%, 10/05/06 1,489 1,488 ============================================================================= TOTAL COMMERCIAL PAPER (Cost $1,488) 1,488 ============================================================================= CASH EQUIVALENT [3.2%] Fidelity Institutional Domestic Money Market Portfolio, Cl I, 5.22%* 1,838,200 1,838 ----------------------------------------------------------------------------- TOTAL CASH EQUIVALENT (Cost $1,838) 1,838 ========================================================================= TOTAL INVESTMENTS [100.8%] (Cost $57,427) 57,052 ========================================================================= OTHER ASSETS AND LIABILITIES [-0.8%] (430) ========================================================================= NET ASSETS -- 100.0% $ 56,622 ============================================================================= * RATE SHOWN IS THE 7-DAY EFFECTIVE YIELD AS OF SEPTEMBER 30, 2006. (A) THE RATE REPORTED IS THE EFFECTIVE YIELD AT TIME OF PURCHASE. CL -- CLASS CMO -- COLLATERALIZED MORTGAGE OBLIGATION FHLMC -- FEDERAL HOME LOAN MORTGAGE CORPORATION FNMA -- FEDERAL NATIONAL MORTGAGE ASSOCIATION MBIA -- MUNICIPAL BOND INSURANCE ASSOCIATION MTN -- MEDIUM TERM NOTE REMIC -- REAL ESTATE MORTGAGE INVESTMENT CONDUIT RB -- REVENUE BOND SER -- SERIES XLCA -- XL CAPITAL ASSURANCE SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 30 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- GOVERNMENT BOND FUND [THE FOLLOWING TABLE WAS REPRESENTED BY A BAR CHART IN THE PRINTED MATERIAL.] SECTOR WEIGHTINGS (UNAUDITED)*: 50.8% U.S. Government Agency Obligations 36.0% U.S. Government Mortgage-Backed Obligations 13.1% U.S. Treasury Obligations 0.1% Short-Term Investments * Percentages based on total investments. - -------------------------------------------------------------------------------- DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- U.S. GOVERNMENT AGENCY OBLIGATIONS [50.4%] FHLB 6.200%, 03/22/21 $ 2,000 $ 1,995 5.020%, 11/07/08 1,000 999 4.375%, 09/17/10 2,000 1,960 FHLMC 5.125%, 10/15/08 30 30 FNMA 7.125%, 06/15/10 4,000 4,298 5.500%, 03/15/11 2,570 2,630 5.010%, 11/10/10 2,500 2,476 5.000%, 07/25/08 2,000 1,995 5.000%, 01/23/09 2,500 2,493 ----------------------------------------------------------------------------- TOTAL U.S. GOVERNMENT AGENCY OBLIGATIONS (Cost $18,989) 18,876 ========================================================================= U.S. GOVERNMENT MORTGAGE-BACKED OBLIGATIONS [35.7%] FHLMC REMIC, Ser R005, Cl AB 5.500%, 12/15/18 1,398 1,396 FHLMC REMIC, Ser R009, Cl AK 5.750%, 12/15/18 1,966 1,972 FHLMC, Ser R003, Cl AG 5.125%, 10/15/15 1,888 1,872 FHLMC, Ser R004, Cl Al 5.125%, 12/15/13 1,944 1,928 FHLMC, Ser R007, Cl AC 5.875%, 05/15/16 1,853 1,859 FNMA, Pool 766620 4.574%, 03/01/34 1,110 1,088 GNMA, Pool 81318 4.500%, 04/20/35 1,170 1,155 GNMA, Pool 81447 5.000%, 08/20/35 131 129 GNMA, Pool 81510 4.250%, 10/20/35 1,415 1,378 GNMA, Pool 864622 4.500%, 06/20/35 600 592 ----------------------------------------------------------------------------- TOTAL U.S. GOVERNMENT MORTGAGE-BACKED OBLIGATIONS (Cost $13,414) 13,369 ========================================================================= DESCRIPTION FACE AMOUNT (000)/SHARES VALUE (000) - -------------------------------------------------------------------------------- U.S. TREASURY OBLIGATIONS [13.0%] U.S. Treasury Notes 5.500%, 02/15/08 $ 1,125 $ 1,135 4.250%, 11/15/13 1,050 1,027 4.250%, 08/15/15 1,150 1,119 3.875%, 01/15/09 1,445 1,487 3.750%, 05/15/08 75 74 ----------------------------------------------------------------------------- TOTAL U.S. TREASURY OBLIGATIONS (Cost $4,916) 4,842 ============================================================================= CASH EQUIVALENT [0.1%] Fidelity Institutional Domestic Money Market Portfolio, Cl I, 5.22%* 49,932 50 ----------------------------------------------------------------------------- TOTAL CASH EQUIVALENT (Cost $50) 50 ========================================================================= TOTAL INVESTMENTS [99.2%] (Cost $37,369) 37,137 ========================================================================= OTHER ASSETS AND LIABILITIES [ 0.8%] 316 ========================================================================= NET ASSETS -- 100.0% $ 37,453 ============================================================================= * RATE SHOWN IS THE 7-DAY EFFECTIVE YIELD AS OF SEPTEMBER 30, 2006. CL -- CLASS FHLB -- FEDERAL HOME LOAN BANK FHLMC -- FEDERAL HOME LOAN MORTGAGE CORPORATION FNMA -- FEDERAL NATIONAL MORTGAGE ASSOCIATION GNMA -- GOVERNMENT NATIONAL MORTGAGE ASSOCIATION REMIC -- REAL ESTATE MORTGAGE INVESTMENT CONDUIT SER -- SERIES SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 31 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- CALIFORNIA TAX EXEMPT BOND FUND [THE FOLLOWING TABLE WAS REPRESENTED BY A BAR CHART IN THE PRINTED MATERIAL.] SECTOR WEIGHTINGS (UNAUDITED)*: 26.6% Education 13.7% General Revenue 11.4% Public Facilities 10.5% General Obligation 9.2% Water 8.6% Industrial Development 6.8% Power 4.8% Transportation 4.6% Utilities 1.6% Healthcare 1.2% Short-Term Investments 1.0% Airport * Percentages based on total investments. - -------------------------------------------------------------------------------- DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- MUNICIPAL BOND [97.9%] ALABAMA [1.0%] Jefferson County, Sewer Authority, Ser B-8, RB, FSA Callable 02/01/10 @ 100 5.250%, 02/01/14 $ 250 $ 262 ============================================================================= ARIZONA [2.0%] Arizona State, Transportation Board, GAN, Ser A, RB 5.000%, 07/01/13 500 540 ============================================================================= CALIFORNIA [78.9%] Anaheim, Public Financing Authority, Distribution System Project, Second Lien, RB, MBIA 5.000%, 10/01/08 250 257 Berkeley, Ser C, GO, MBIA Callable 11/10/06 @ 102 5.000%, 09/01/10 95 96 Beverly Hills, Unified School District Authority, Ser B, GO Pre-Refunded @ 101 (A) 4.700%, 06/01/08 50 51 Big Bear Lake, Water Authority, RB, MBIA 6.000%, 04/01/11 200 216 Burbank, Public Financing Authority, Golden State Redevelopment Project, Ser A, RB, AMBAC Callable 12/01/13 @ 100 5.250%, 12/01/18 175 190 DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- California State, Department of Water Resource & Power, Ser B-5, RB Callable 10/10/06 @ 100 (C) 3.650%, 05/01/22 $ 400 $ 400 California State, Department of Water Resources, Ser A, RB, AMBAC Callable 05/01/12 @ 101 5.500%, 05/01/14 300 331 California State, Department of Water Resources, Ser W, RB, FSA 5.500%, 12/01/13 400 448 California State, Educational Facilities Authority, Pooled College & University Projects, Ser A, RB 4.300%, 04/01/09 100 101 California State, Educational Facilities Authority, University of San Francisco, RB, MBIA 6.000%, 10/01/08 300 315 California State, GO 4.750%, 06/01/07 100 101 California State, GO Callable 02/01/12 @ 100 5.000%, 02/01/18 175 184 California State, GO Callable 08/01/13 @ 100 5.250%, 02/01/21 250 269 California State, GO Callable 10/01/10 @ 100 5.250%, 10/01/18 50 52 California State, GO Pre-Refunded @ 100 (A) 5.250%, 09/01/10 200 213 California State, GO Pre-Refunded @ 100 (A) 5.250%, 10/01/10 20 21 California State, Infrastructure & Economic Authority, Bay Area Toll Bridges Project, Ser A, RB, FSA Pre-Refunded @ 100 (A) 5.250%, 07/01/13 125 138 California State, Infrastructure & Economic Authority, Energy Efficiency Master Trust, Ser A, RB 5.000%, 03/01/11 315 334 California State, Infrastructure & Economic Authority, RB, MBIA Pre-Refunded @ 101 (A) 5.500%, 06/01/10 350 378 SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 32 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- CALIFORNIA TAX EXEMPT BOND FUND (CONTINUED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- California State, Public Works Board Lease, California State University, Ser C, RB 5.000%, 10/01/07 $ 100 $ 101 California State, Public Works Board Lease, Department of Corrections Project, Ser B, RB, MBIA Callable 09/01/08 @ 101 5.000%, 09/01/21 100 103 California State, Public Works Board Lease, Department of Corrections, Ser A, RB Callable 09/01/08 @ 101 5.250%, 09/01/15 250 259 California State, Public Works Board Lease, Department of Corrections-State Prisons Project, Ser A, RB, AMBAC 5.250%, 12/01/13 600 657 California State, Public Works Board Lease, Department of Corrections-Ten Administration, Ser A, RB, AMBAC Callable 03/01/12 @ 100 5.250%, 03/01/18 155 166 California State, Public Works Board Lease, Trustees California State University, Ser A, RB Callable 10/01/08 @ 101 5.250%, 10/01/11 100 104 California State, Public Works Board Lease, Various University Projects, RB, MBIA Callable 06/01/11 @ 100 5.500%, 06/01/14 250 277 California State, Ser A-3, GO (C) 3.650%, 05/01/33 200 200 California State, University of California, Ser K, RB, MBIA Callable 09/01/08 @ 101 5.000%, 09/01/17 150 155 California Statewide, Communities Development Authority, Ser B-2, RB, XLCA 4.000%, 11/15/06 400 400 Central, Unified School District Authority, Ser A, GO, FGIC 5.500%, 07/01/22 400 444 DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Coachella Valley, Water District Authority, Flood Control Project, COP, AMBAC Callable 10/01/07 @ 102 5.000%, 10/01/11 $ 250 $ 258 Corona, Public Financing Authority, City Hall Project, Ser B, RB Callable 09/01/12 @ 100 5.250%, 09/01/16 350 381 Culver City, Redevelopment Finance Authority, TA, AMBAC Sink Date 11/01/09 @ 100 5.500%, 11/01/14 75 82 Desert Sands, Unified School District, COP, MBIA Callable 03/01/13 @ 100 5.250%, 03/01/15 405 442 Escondido, Union School District, Refunding & Financing Project, COP, MBIA 4.750%, 07/01/19 735 792 Evergreen School District, Ser C, GO, FGIC Pre-Refunded @ 101 (A) 5.250%, 09/01/08 200 209 Fruitvale, School District, GO, FSA Callable 08/01/09 @ 102 5.000%, 08/01/19 200 211 Golden State, Tobacco Settlement, Ser A, RB Callable 06/01/09 @ 100 5.000%, 06/01/19 250 256 Golden State, Tobacco Settlement, Ser B, RB Pre-Refunded @ 100 (A) 5.750%, 06/01/08 250 259 Irvine, Improvement Board, Act 1915 Project, District #93-14, SAB (B) 3.650%, 09/02/25 100 100 Los Angeles County, Public Works Finance Authority, Master Refunding Project, Ser A, RB, MBIA 5.000%, 12/01/12 275 297 Los Angeles County, Public Works Finance Authority, Regional Park & Open Project, Ser A, RB Pre-Refunded @ 101 (A) 5.500%, 10/01/07 325 335 SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 33 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- CALIFORNIA TAX EXEMPT BOND FUND (CONTINUED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Los Angeles County, Public Works Finance Authority, Ser B, RB, MBIA Callable 11/01/06 @ 102 5.250%, 09/01/14 $ 200 $ 204 Los Angeles, Harbor Development Project, Ser C, RB Callable 11/01/06 @ 101 5.125%, 11/01/11 180 182 Los Angeles, Municipal Improvement Authority, Central Library Project, Ser A, RB, MBIA 5.250%, 06/01/13 230 253 Los Angeles, Property Tax Project, Ser A, GO, MBIA 4.000%, 09/01/09 250 254 Los Angeles, Wastewater Systems Authority, RB, FSA 4.500%, 06/01/09 250 257 Los Angeles, Water & Power Authority, Power Systems Project, Ser A, RB 5.000%, 07/01/08 500 513 Los Angeles, Water & Power Authority, Power Systems Project, Ser AA1, RB, MBIA Callable 07/01/11 @ 100 5.250%, 07/01/13 200 215 M-S-R Public Power, Ser G, RB, MBIA Callable 07/01/07 @ 101 5.250%, 07/01/11 100 102 Modesto, Irrigation District, Capital Improvements Project, Ser A, COP, AMBAC Callable 10/01/16 @ 100 5.000%, 10/01/19 330 359 Northern California, Transmission Resource Authority, Ore Transmission Project, Ser A, RB, MBIA 7.000%, 05/01/13 250 292 Oakland, Joint Powers Financing Authority, Oakland Convention Center Project, RB, AMBAC 5.500%, 10/01/11 300 327 Oakland, Redevelopment Agency, Central Distric Redevelopment Project, TA, AMBAC 6.000%, 02/01/07 300 302 5.500%, 02/01/14 475 512 DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Oakland, State Building Authority, Elihu M Harris Project, Ser A, RB, AMBAC Pre-Refunded @ 101 (A) 5.500%, 04/01/08 $ 100 $ 104 Pasadena, Electric Improvements Authority, RB, FSA 4.500%, 06/01/07 160 161 Pinole, Redevelopment Agency Project, TA, FSA Callable 08/01/09 @ 101 5.250%, 08/01/14 100 105 Riverside, RB Callable 10/01/08 @ 101 5.375%, 10/01/12 90 94 Riverside, RB Pre-Refunded @ 101 (A) 5.375%, 10/01/08 10 10 Sacramento County, Sanitation District Funding Authority, RB, ETM Callable 11/10/06 @ 102 5.000%, 12/01/07 100 102 Sacramento, City Unified School District, Ser A, GO, FSA 4.250%, 07/01/09 75 77 San Bernardino, Community College District, Election 2002 Project, Ser B, GO, MBIA Pre-Refunded @ 100 (A) 5.250%, 08/01/14 750 834 San Diego County, Edgemoor & Regional Systems Projects, COP, AMBAC Callable 02/01/15 @ 100 5.000%, 02/01/18 500 538 San Diego County, North County Regional Center for Expansion, COP, AMBAC Pre-Refunded @ 102 (A) 5.250%, 11/15/06 100 102 San Diego, Unified School District, Election 1998 Project, Ser B-1, GO, MBIA 5.000%, 07/01/17 1,000 1,107 San Diego, Unified School District, Election 1998 Project, Ser E, GO, FSA Callable 07/01/13 @ 100 5.000%, 07/01/28 400 431 SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 34 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- CALIFORNIA TAX EXEMPT BOND FUND (CONTINUED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- San Diego, University School District, Capital Appreciation- Election 1998 Project, Ser D, GO, FGIC Callable 07/01/12 @ 101 5.250%, 07/01/24 $ 135 $ 148 San Diego, University School District, Election 1998 Project, Ser E, GO, FSA Callable 07/01/13 @ 101 5.250%, 07/01/16 100 110 San Francisco (City & County), Airports Commission Authority, Second Ser-27B, RB, FGIC 5.250%, 05/01/12 250 268 San Francisco (City & County), Public Utility Authority, Ser A, RB, MBIA Callable 11/01/06 @ 101.5 5.000%, 11/01/17 160 163 San Jose, University School District, Ser A, GO, FSA Callable 08/01/11 @ 101 5.375%, 08/01/19 150 162 San Ysidro, School District, Election 1997 Project, Ser C, GO, MBIA 6.000%, 08/01/11 205 228 Sanger, Unified School District, Election 2006 Project, Ser A, GO, FSA Callable 08/01/16 @ 102 5.000%, 08/01/18 500 555 Sanger, Unified School District, GO, MBIA 5.350%, 08/01/15 250 272 Santa Monica, Public Safety Facilities Project, RB Callable 07/01/09 @ 101 5.250%, 07/01/14 100 105 Semitropic, Improvement Water Storage Authority, RB, FSA, ACA Insured Pre-Refunded @ 103 (A) 4.000%, 06/01/11 250 262 Solano County, COP, MBIA Callable 11/01/12 @ 100 5.250%, 11/01/14 100 109 DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Southern California, Metropolitan Water District Authority, Ser A, RB 5.750%, 07/01/21 $ 280 $ 331 Southern California, Publiic Power Authority, Southern Transmission Project, Sub-Ser A, RB, FSA Callable 07/01/12 @ 100 5.250%, 07/01/16 200 217 Sweetwater, Union High School District, Ser A, RB, FSA 5.000%, 09/01/13 355 385 Wiseburn, School District, Ser A, GO, FGIC 4.200%, 08/01/07 125 126 ----------------------------------------------------------------------------- TOTAL CALIFORNIA 21,461 ============================================================================= FLORIDA [1.4%] Florida State, Correctional Private Commission Authority, COP, MBIA Callable 08/01/11 @ 101 5.375%, 08/01/14 350 379 ============================================================================= GEORGIA [0.8%] Georgia State, Metropolitan Atlanta Rapid Transportation Authority, Second Indenture Project, Ser A, RB, MBIA 6.250%, 07/01/07 200 204 ============================================================================= ILLINOIS [2.2%] Illinois State, Civic Center Authority, RB, FSA Callable 12/15/10 @ 100 5.500%, 12/15/14 200 214 Illinois State, Development Finance Authority, Revolving Fund-Master Trust, RB Callable 09/01/12 @ 100 5.500%, 09/01/13 250 274 Illinois State, Ser A, GO Callable 10/01/13 @ 100 5.000%, 10/01/16 100 108 ----------------------------------------------------------------------------- TOTAL ILLINOIS 596 ============================================================================= SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 35 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- CALIFORNIA TAX EXEMPT BOND FUND (CONTINUED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- MICHIGAN [0.9%] Michigan State, Building Authority, Facilities Project, Ser II, RB Pre-Refunded @ 101 (A) 5.000%, 10/15/07 $ 250 $ 256 ============================================================================= NEW JERSEY [1.4%] New Jersey State, Turnpike Authority, RB, MBIA, ETM 6.500%, 01/01/16 315 369 ============================================================================= NEW YORK [2.1%] New York State, Ser E, RB 6.000%, 04/01/14 500 574 ============================================================================= OREGON [1.4%] Lane County, School District, GO Pre-Refunded @ 100 (A) 5.625%, 06/15/10 345 370 ============================================================================= TEXAS [2.0%] San Angelo, Waterworks & Sewer System Authority, Refunding & Improvements Projects, RB, FSA Callable 04/01/11 @ 100 5.250%, 04/01/19 100 106 Travis County, Health Facilities Development Authority, Ascension Health Credit Project, Ser A, RB, MBIA Pre-Refunded @ 101 (A) 6.250%, 11/15/09 400 435 ----------------------------------------------------------------------------- TOTAL TEXAS 541 ============================================================================= UTAH [0.5%] Central, Water Conservancy District, Ser D, GO Pre-Refunded @ 100 (A) 4.600%, 04/01/09 140 144 ============================================================================= WASHINGTON [1.3%] Washington State, Ser 02-A, GO, FSA Callable 07/01/11 @ 100 5.000%, 07/01/19 345 362 ============================================================================= DESCRIPTION FACE AMOUNT (000)/SHARES VALUE (000) - -------------------------------------------------------------------------------- PUERTO RICO [2.0%] Puerto Rico, Electric Power Authority, Power Project, Ser CC, RB, MBIA Callable 07/01/07 @ 101.5 5.250%, 07/01/09 $ 100 $ 103 Puerto Rico, Municipal Finance Agency, Ser A, RB, FSA Callable 07/01/07 @ 101.5 5.250%, 07/01/10 130 133 Puerto Rico, Public Buildings Authority, Government Facilities Project, Ser J, RB, AMBAC Callable 07/01/12 @ 100 5.000%, 07/01/36 300 320 ----------------------------------------------------------------------------- TOTAL PUERTO RICO 556 ============================================================================= TOTAL MUNICIPAL BOND (Cost $26,537) 26,614 ======================================================================= CASH EQUIVALENT [1.1%] Federated California Municipal Money Market Fund, Cl I, 3.42%* 309,680 310 ----------------------------------------------------------------------------- TOTAL CASH EQUIVALENT (Cost $310) 310 ========================================================================= TOTAL INVESTMENTS [99.0%] (Cost $26,847) 26,924 ========================================================================= OTHER ASSETS AND LIABILITIES [1.0%] 284 ========================================================================= NET ASSETS -- 100.0% $ 27,208 ============================================================================= SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 36 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- CALIFORNIA TAX EXEMPT BOND FUND (CONCLUDED) DESCRIPTION - -------------------------------------------------------------------------------- (A) PRE-REFUNDED SECURITY - THE MATURITY DATE SHOWN IS THE PRE-REFUNDED DATE. (B) SECURITIES ARE HELD IN CONJUNCTION WITH A LETTER OF CREDIT FROM A MAJOR BANK OR FINANCIAL INSTITUTION. (C) FLOATING RATE SECURITY - THE RATE REFLECTED ON THE SCHEDULE OF INVESTMENTS IS THE RATE IN EFFECT ON SEPTEMBER 30, 2006. * RATE SHOWN IS THE 7-DAY EFFECTIVE YIELD AS OF SEPTEMBER 30, 2006. AMBAC -- AMERICAN MUNICIPAL BOND ASSURANCE COMPANY COP -- CERTIFICATE OF PARTICIPATION ETM -- ESCROWED TO MATURITY FGIC -- FINANCIAL GUARANTY INSURANCE COMPANY FSA -- FINANCIAL SECURITY ASSISTANCE GAN -- GRANT ANTICIPATION NOTE GO -- GENERAL OBLIGATION MBIA -- MUNICIPAL BOND INSURANCE ASSOCIATION RB -- REVENUE BOND SAB -- SPECIAL ASSESSMENT BOND SER -- SERIES TA -- TAX ALLOCATION XLCA -- XL CAPITAL ASSURANCE SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 37 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- HIGH YIELD BOND FUND [THE FOLLOWING TABLE WAS REPRESENTED BY A BAR CHART IN THE PRINTED MATERIAL.] SECTOR WEIGHTINGS (UNAUDITED)*: 72.2% Industrial 7.5% Financial 6.2% Telephone 5.8% Utilities 4.9% Gas Transmission 1.8% Short-Term Investments 1.5% Transportation 0.1% Common Stock 0.0% Healthcare * Percentages based on total investments. - -------------------------------------------------------------------------------- DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- CORPORATE BONDS [97.0%] ADVERTISING [0.3%] Advanstar Communications 10.750%, 08/15/10 $ 100 $ 108 ============================================================================= AEROSPACE & DEFENSE [1.3%] DRS Techologies 6.625%, 02/01/16 100 98 Esterline Technologies 7.750%, 06/15/13 100 101 L-3 Communications 5.875%, 01/15/15 200 190 Sequa, Ser B 8.875%, 04/01/08 150 156 ----------------------------------------------------------------------------- TOTAL AEROSPACE & DEFENSE 545 ============================================================================= AGRICULTURE [0.4%] American Rock Salt 9.500%, 03/15/14 150 155 ============================================================================= AIRLINES [0.5%] American Airlines, Ser 2001-2 7.800%, 04/01/08 200 200 ============================================================================= ALUMINUM [0.3%] Novelis (A) 8.250%, 02/15/15 150 142 ============================================================================= APPAREL/TEXTILES [0.4%] Levi Strauss 9.750%, 01/15/15 100 103 Phillips-Van Heusen 7.250%, 02/15/11 75 76 ----------------------------------------------------------------------------- TOTAL APPAREL/TEXTILES 179 ============================================================================= DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- AUTO RENT & LEASE [1.4%] Avis Budget Car Rental (A) 7.750%, 05/15/16 $ 100 $ 97 Hertz (A) 10.500%, 01/01/16 150 165 Rent-Way 11.875%, 06/15/10 100 116 United Rentals 6.500%, 02/15/12 90 87 Williams Scotsman 8.500%, 10/01/15 100 102 ----------------------------------------------------------------------------- TOTAL AUTO RENT & LEASE 567 ============================================================================= AUTOMOTIVE [1.6%] General Motors 7.125%, 07/15/13 725 637 ============================================================================= AUTOPARTS [1.2%] Accuride 8.500%, 02/01/15 150 140 Dura Operating, Ser D 9.000%, 05/01/09 75 3 Metaldyne 10.000%, 11/01/13 100 101 Tenneco Automotive 8.625%, 11/15/14 150 148 TRW Automotive 11.000%, 02/15/13 98 107 ----------------------------------------------------------------------------- TOTAL AUTOPARTS 499 ============================================================================= BROADCASTING & CABLE [6.8%] Albritton Communications 7.750%, 12/15/12 150 151 Atlantic Broadband Finance (A) 9.375%, 01/15/14 100 98 Cablevision Systems, Ser B 8.000%, 04/15/12 225 228 CCO Holdings 8.750%, 11/15/13 250 252 Charter Communications Holdings 10.250%, 09/15/10 400 408 Coleman Cable 9.875%, 10/01/12 100 100 CSC Holdings 7.625%, 07/15/18 100 102 Echostar DBS 6.625%, 10/01/14 200 190 Fisher Communication 8.625%, 09/15/14 150 156 SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 38 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- HIGH YIELD BOND FUND (CONTINUED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- General Cable 9.500%, 11/15/10 $ 100 $ 107 Gray Television 9.250%, 12/15/11 100 104 Insight Commununications (B) 12.250%, 02/15/11 100 106 Kabel Deutschland (A) 10.625%, 07/01/14 200 214 Mediacom Capital 7.875%, 02/15/11 150 148 Nexstar Finance Holdings (B) 10.050%, 04/01/13 200 167 Olympus Communications, Ser B (D) 10.625%, 11/15/06 100 140 Videotron Ltee 6.875%, 01/15/14 100 99 ----------------------------------------------------------------------------- TOTAL BROADCASTING & CABLE 2,770 ============================================================================= BUILDING & CONSTRUCTION [4.1%] Ainsworth Lumber 7.250%, 10/01/12 100 74 6.750%, 03/15/14 100 70 Beazer Homes USA 8.375%, 04/15/12 100 100 Brand Services 12.000%, 10/15/12 150 168 DR Horton 5.625%, 01/15/16 125 116 Goodman Global Holdings 7.875%, 12/15/12 75 71 Interline Brands 8.125%, 06/15/14 50 51 International Utility Structures (D) 10.750%, 02/01/08 100 1 KB Home 8.625%, 12/15/08 50 51 6.250%, 06/15/15 200 184 Nortek 8.500%, 09/01/14 200 189 Panolam Industries (A) 10.750%, 10/01/13 250 252 Ply Gem Industries 9.000%, 02/15/12 150 120 RMCC Acquisition (A) 9.500%, 11/01/12 150 155 Tech Olympic USA 7.500%, 01/15/15 100 77 ----------------------------------------------------------------------------- TOTAL BUILDING & CONSTRUCTION 1,679 ============================================================================= DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- BUSINESS SERVICES [0.7%] Corrections 7.500%, 05/01/11 $ 100 $ 102 FTI Consulting 7.625%, 06/15/13 50 51 Geo Group 8.250%, 07/15/13 150 150 ----------------------------------------------------------------------------- TOTAL BUSINESS SERVICES 303 ============================================================================= CHEMICALS [4.7%] Basell Af SCA (A) 8.375%, 08/15/15 250 248 BCP Crystal US Holdings 9.625%, 06/15/14 45 49 Crystal Holdings, Ser B (B) 9.037%, 10/01/14 73 59 Equistar Chemicals 10.625%, 05/01/11 150 161 Georgia Gulf (A) 9.500%, 10/15/14 150 149 Lyondell Chemical 8.250%, 09/15/16 60 61 8.000%, 09/15/14 60 61 Mosaic Global Holdings 10.875%, 08/01/13 100 111 Mosaic Global Holdings, Ser B 11.250%, 06/01/11 100 106 Nalco 7.750%, 11/15/11 150 153 Nova Chemicals 6.500%, 01/15/12 250 235 Polymer Holdings (B) 11.043%, 07/15/14 250 203 PolyOne 10.625%, 05/15/10 100 107 Rhodia 10.250%, 06/01/10 65 73 Rockwood Specialties Group 10.625%, 05/15/11 73 78 Terra Capital 11.500%, 06/01/10 65 71 ----------------------------------------------------------------------------- TOTAL CHEMICALS 1,925 ============================================================================= CIRCUIT BOARDS [0.1%] Viasystems 10.500%, 01/15/11 50 49 ============================================================================= SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 39 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- HIGH YIELD BOND FUND (CONTINUED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- COAL MINING [0.4%] Alpha Natural Resources 10.000%, 06/01/12 $ 150 $ 161 ============================================================================= COMMERCIAL SERVICES [0.9%] Iron Mountain 8.750%, 07/15/18 150 156 8.625%, 04/01/13 100 102 The Brickman Group, Ser B 11.750%, 12/15/09 100 107 ----------------------------------------------------------------------------- TOTAL COMMERCIAL SERVICES 365 ============================================================================= COMPUTER SYSTEM DESIGN & SERVICES [0.9%] Activant Solution (A) 9.500%, 05/01/16 100 93 Xerox 7.625%, 06/15/13 250 262 ----------------------------------------------------------------------------- TOTAL COMPUTERS SYSTEM DESIGN & SERVICES 355 ============================================================================= CONSUMER PRODUCTS & SERVICES [4.4%] Ames True Temper (C) 9.507%, 01/15/12 100 101 Exopac Holding (A) 11.250%, 02/01/14 100 102 Gregg Appliances 9.000%, 02/01/13 150 137 Johnsondiversey Holdings (B) 12.305%, 05/15/13 200 173 Johnsondiversey, Ser B 9.625%, 05/15/12 150 151 Libbey Glass (A) (C) 12.436%, 06/01/11 100 104 Prestige Brands 9.250%, 04/15/12 90 90 Sealy Mattress 8.250%, 06/15/14 200 204 Southern States Cooperative (A) 10.500%, 11/01/10 200 209 Spectrum Brands 7.375%, 02/01/15 300 240 Steinway Musical (A) 7.000%, 03/01/14 100 98 Visant Holding (A) 8.750%, 12/01/13 100 101 WMG Holdings (B) 9.563%, 12/15/14 130 97 ----------------------------------------------------------------------------- TOTAL CONSUMER PRODUCTS & SERVICES 1,807 ============================================================================= DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- CONTAINERS & PACKAGING [2.0%] Crown Americas 7.750%, 11/15/15 $ 150 $ 152 Graham Packaging 9.875%, 10/15/14 100 98 Intertape Polymer US 8.500%, 08/01/14 50 47 Owens-Brockway Glass Container 6.750%, 12/01/14 100 95 Owens-Illinois 8.100%, 05/15/07 100 101 Plastipak Holdings (A) 8.500%, 12/15/15 100 101 Solo Cup 8.500%, 02/15/14 150 130 Stone Container 7.375%, 07/15/14 100 91 ----------------------------------------------------------------------------- TOTAL CONTAINERS & PACKAGING 815 ============================================================================= DIVERSIFIED OPERATIONS [0.9%] Jacuzzi Brands 9.625%, 07/01/10 150 159 Trinity Industries 6.500%, 03/15/14 200 195 ----------------------------------------------------------------------------- TOTAL DIVERSIFIED OPERATIONS 354 ============================================================================= EDUCATIONAL SERVICES [0.3%] Education Management (A) 10.250%, 06/01/16 60 61 8.750%, 06/01/14 60 61 ----------------------------------------------------------------------------- TOTAL EDUCATIONAL SERVICES 122 ============================================================================= ELECTRICAL PRODUCTS [0.5%] ESI Tractebel Acquisitions, Ser B 7.990%, 12/30/11 60 62 Kinetek, Ser D 10.750%, 11/15/06 150 149 ----------------------------------------------------------------------------- TOTAL ELECTRICAL PRODUCTS 211 ============================================================================= ELECTRIC UTILITIES [5.1%] AES (A) 9.000%, 05/15/15 300 323 7.750%, 03/01/14 100 104 Allegheny Energy Supply 7.800%, 03/15/11 200 213 Aquila 7.625%, 11/15/09 100 104 SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 40 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- HIGH YIELD BOND FUND (CONTINUED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Calpine Generating (D) 11.080%, 04/01/10 $ 200 $ 210 CMS Energy 7.500%, 01/15/09 100 103 6.875%, 12/15/15 150 152 Edison Mission Energy 7.730%, 06/15/09 200 206 Mirant North America 7.375%, 12/31/13 150 150 Reliant Resources 9.500%, 07/15/13 200 208 Sierra Pacific Resources 8.625%, 03/15/14 200 216 TECO Energy 7.200%, 05/01/11 100 104 ----------------------------------------------------------------------------- TOTAL ELECTRIC UTILITIES 2,093 ============================================================================= ENTERTAINMENT & GAMING [7.8%] AMC Entertainment 11.000%, 02/01/16 100 109 9.875%, 02/01/12 100 103 9.500%, 02/01/11 72 72 Aztar 9.000%, 08/15/11 100 104 Choctaw Resort Development Entity (A) 7.250%, 11/15/19 200 199 Chukchansi Economic Development Authority (A) 8.000%, 11/15/13 150 154 Cinemark USA 9.000%, 02/01/13 100 104 Circus & Eldorado Joint Venture/ Silver Legacy Capital 10.125%, 03/01/12 150 158 Herbst Gaming 8.125%, 06/01/12 150 153 Inn of the Mountain Gods 12.000%, 11/15/10 150 157 Isle of Capri Casinos 7.000%, 03/01/14 200 190 Jacobs Entertainment (A) 9.750%, 06/15/14 75 74 MGM Mirage 8.500%, 09/15/10 200 213 6.750%, 09/01/12 100 99 6.000%, 10/01/09 100 99 Mohegan Tribal Gaming Authority 7.125%, 08/15/14 150 149 DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- MTR Gaming Group, Ser B 9.750%, 04/01/10 $ 200 $ 210 OED/Diamond Jo 8.750%, 04/15/12 100 100 Penn National Gaming 6.875%, 12/01/11 100 100 Speedway Motorsports 6.750%, 06/01/13 100 99 Station Casinos 6.875%, 03/01/16 100 94 Tunica-Biloxi Gaming Authority (A) 9.000%, 11/15/15 125 130 Waterford Gaming (A) 8.625%, 09/15/12 109 115 Wynn Las Vegas Capital 6.625%, 12/01/14 200 194 ----------------------------------------------------------------------------- TOTAL ENTERTAINMENT & GAMING 3,179 ============================================================================= FINANCIAL SERVICES [2.9%] Ford Motor Credit 7.375%, 10/28/09 200 194 7.375%, 02/01/11 350 336 GMAC 6.750%, 12/01/14 675 659 ----------------------------------------------------------------------------- TOTAL FINANCIAL SERVICES 1,189 ============================================================================= FOOD, BEVERAGE & TOBACCO [4.2%] Chiquita Brands International 7.500%, 11/01/14 100 87 Del Monte 8.625%, 12/15/12 50 52 Dominos 8.250%, 07/01/11 75 79 Friendly Ice Cream 8.375%, 06/15/12 200 181 General Nutrition Center 8.500%, 12/01/10 150 146 Land O' Lakes 8.750%, 11/15/11 6 6 Le-Natures (A) 10.000%, 06/15/13 150 155 Leiner Health Products 11.000%, 06/01/12 100 97 National Beef Packaging 10.500%, 08/01/11 100 104 National Wine & Spirits 10.125%, 01/15/09 100 101 Pinnacle Foods 8.250%, 12/01/13 150 150 SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 41 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- HIGH YIELD BOND FUND (CONTINUED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Smithfield Foods, Ser B 8.000%, 10/15/09 $ 350 $ 366 Swift 12.500%, 01/01/10 200 203 ----------------------------------------------------------------------------- TOTAL FOOD, BEVERAGE & TOBACCO 1,727 ============================================================================= FORESTRY [0.1%] Tembec Industries 7.750%, 03/15/12 100 51 ============================================================================= GAS/NATURAL GAS [3.9%] Colorado Interstate Gas 6.800%, 11/15/15 150 151 El Paso 7.000%, 05/15/11 275 277 El Paso Natural Gas 7.625%, 08/01/10 150 155 MarkWest Energy Partners (A) 8.500%, 07/15/16 150 151 Semco Energy 7.125%, 05/15/08 250 249 Targa Resources (A) 8.500%, 11/01/13 200 200 Williams 8.125%, 03/15/12 200 213 7.625%, 07/15/19 50 52 6.375%, 10/01/10 (A) 150 149 ----------------------------------------------------------------------------- TOTAL GAS/NATURAL GAS 1,597 ============================================================================= MACHINERY [1.5%] Case New Holland 9.250%, 08/01/11 100 106 7.125%, 03/01/14 100 100 Cummins 9.500%, 12/01/10 150 158 Terex 7.375%, 01/15/14 100 100 Trimas 9.875%, 06/15/12 150 139 ----------------------------------------------------------------------------- TOTAL MACHINERY 603 ============================================================================= MEDICAL [3.2%] Angiotech Pharmaceuticals (A) 7.750%, 04/01/14 100 95 Bio-Rad Laboratories 7.500%, 08/15/13 100 102 Biovail 7.875%, 04/01/10 100 100 DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- CDRV Investors (B) 9.558%, 01/01/15 $ 200 $ 148 Extendicare Health 6.875%, 05/01/14 100 107 Genesis HealthCare 8.000%, 10/15/13 100 104 MQ Associates (B) 13.869%, 08/15/12 150 53 Mylan Laboratories 5.750%, 08/15/10 150 148 Omnicare 6.750%, 12/15/13 250 243 Tenet Healthcare 9.250%, 02/01/15 200 193 ----------------------------------------------------------------------------- TOTAL MEDICAL 1,293 ============================================================================= MEDICAL PRODUCTS & SERVICES [0.2%] Vanguard Health Holding 9.000%, 10/01/14 100 97 ============================================================================= MISCELLANEOUS BUSINESS SERVICES [2.5%] Affinion Group 11.500%, 10/15/15 150 154 Allied Security Escrow 11.375%, 07/15/11 150 150 Carriage Services 7.875%, 01/15/15 200 194 CCM Merger (A) 8.000%, 08/01/13 225 216 Compagnie Generale de Geophysique 7.500%, 05/15/15 50 50 Integrated Alarm Services Group (A) 12.000%, 11/15/11 100 99 Mobile Services Group 9.750%, 08/01/14 150 154 ----------------------------------------------------------------------------- TOTAL MISCELLANEOUS BUSINESS SERVICES 1,017 ============================================================================= MISCELLANEOUS MANUFACTURING [0.9%] Dresser-Rand Group 7.375%, 11/01/14 133 130 KI Holdings (B) 9.972%, 11/15/14 250 184 Maax Holdings (B) 26.373%, 12/15/12 200 74 ----------------------------------------------------------------------------- TOTAL MISCELLANEOUS MANUFACTURING 388 ============================================================================= SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 42 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- HIGH YIELD BOND FUND (CONTINUED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- PAPER & RELATED PRODUCTS [3.4%] Abitibi-Consolidated 7.750%, 06/15/11 $ 100 $ 92 Appleton Papers, Ser B 9.750%, 06/15/14 100 99 Domtar 7.125%, 08/15/15 150 139 Georgia-Pacific 7.700%, 06/15/15 100 100 JSG Funding 9.625%, 10/01/12 100 105 Neenah Paper 7.375%, 11/15/14 150 141 Newark Group 9.750%, 03/15/14 200 194 Norampac 6.750%, 06/01/13 100 95 Norske Skog Canada 7.375%, 03/01/14 250 230 Smurfit Kappa Funding 7.750%, 04/01/15 150 142 Verso Paper Holdings (A) 9.125%, 08/01/14 65 65 ----------------------------------------------------------------------------- TOTAL PAPER & RELATED PRODUCTS 1,402 ============================================================================= PETROLEUM & FUEL PRODUCTS [7.2%] Atlas Pipeline Partners 8.125%, 12/15/15 200 204 Chesapeake Energy 6.250%, 01/15/18 100 93 Clayton William Energy 7.750%, 08/01/13 150 135 Comstock Resources 6.875%, 03/01/12 150 143 Dynegy Holdings 6.875%, 04/01/11 100 97 El Paso Production Holding 7.750%, 06/01/13 200 204 Forest Oil 8.000%, 06/15/08 150 154 8.000%, 12/15/11 100 104 Frontier Oil 6.625%, 10/01/11 150 150 Giant Industries 8.000%, 05/15/14 200 216 Pacific Energy 7.125%, 06/15/14 100 102 6.250%, 09/15/15 250 246 Parker Drilling 9.625%, 10/01/13 150 164 Plains Exploration & Production 8.750%, 07/01/12 150 159 DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Pogo Producing 6.875%, 10/01/17 $ 300 $ 286 Pride International 7.375%, 07/15/14 100 103 Swift Energy 7.625%, 07/15/11 100 100 Whiting Petroleum 7.000%, 02/01/14 300 292 ----------------------------------------------------------------------------- TOTAL PETROLEUM & FUEL PRODUCTS 2,952 ============================================================================= PRINTING & PUBLISHING [3.3%] Dex Media (B) 8.738%, 11/15/13 200 168 Dex Media East 9.875%, 11/15/09 100 105 Dex Media West, Ser B 8.500%, 08/15/10 100 103 Emmis Operating 6.875%, 05/15/12 150 150 Haights Cross Operating 11.750%, 08/15/11 200 205 JII Holdings 13.000%, 04/01/07 70 60 Primedia 8.000%, 05/15/13 100 91 RH Donnelley 6.875%, 01/15/13 200 182 RH Donnelley, Ser A-2 6.875%, 01/15/13 50 46 Sheridan Group 10.250%, 08/15/11 150 152 Warner Music Group 7.375%, 04/15/14 100 98 ----------------------------------------------------------------------------- TOTAL PRINTING & PUBLISHING 1,360 ============================================================================= REAL ESTATE INVESTMENT TRUST [0.4%] Host Marriott, Ser O 6.375%, 03/15/15 150 145 ============================================================================= RETAIL [2.7%] Asbury Automotive Group 9.000%, 06/15/12 150 154 Denny's Holdings 10.000%, 10/01/12 150 155 Group 1 Automotive 8.250%, 08/15/13 100 102 Jean County Group 8.500%, 08/01/14 150 144 Landry's Restaurants, Ser B 7.500%, 12/15/14 100 96 SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 43 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- HIGH YIELD BOND FUND (CONTINUED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Leslie's Poolmart 7.750%, 02/01/13 $ 100 $ 99 NPC International (A) 9.500%, 05/01/14 100 99 Rite Aid 8.125%, 05/01/10 100 100 True Temper Sports 8.375%, 09/15/11 150 134 ----------------------------------------------------------------------------- TOTAL RETAIL 1,083 ============================================================================= RUBBER & PLASTIC [0.4%] Goodyear Tire & Rubber 9.000%, 07/01/15 150 152 ============================================================================= SEMI-CONDUCTORS [1.2%] Amkor Technology 9.250%, 06/01/16 100 94 Flextronics International 6.250%, 11/15/14 100 97 Freescale Semiconductors 7.125%, 07/15/14 200 214 Sensata Technologies (A) 8.000%, 05/01/14 100 97 ----------------------------------------------------------------------------- TOTAL SEMI-CONDUCTORS 502 ============================================================================= STEEL & STEEL WORKS [1.4%] AK Steel 7.875%, 02/15/09 115 114 7.750%, 06/15/12 200 195 Gerdau Ameristeel 10.375%, 07/15/11 100 108 International Steel Group 6.500%, 04/15/14 150 148 ----------------------------------------------------------------------------- TOTAL STEEL & STEEL WORKS 565 ============================================================================= TELEPHONES & TELECOMMUNICATIONS [8.5%] American Cellular, Ser B 10.000%, 08/01/11 150 157 American Tower 7.125%, 10/15/12 150 154 Centennial Communications 10.125%, 06/15/13 100 106 8.125%, 02/01/14 50 49 Cincinnati Bell 8.375%, 01/15/14 185 187 Dobson Cellular Systems 9.875%, 11/01/12 230 247 DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Dobson Communications (C) 9.757%, 10/15/12 $ 250 $ 255 Insight Midwest 9.750%, 10/01/09 200 204 IPCS 11.500%, 05/01/12 150 168 Nextel Partners 8.125%, 07/01/11 150 158 Nordic Telephone (A) 8.875%, 05/01/16 50 53 NTL Cable 9.125%, 08/15/16 150 155 PanAmSat 9.000%, 08/15/14 96 99 Qwest 7.625%, 06/15/15 564 585 5.625%, 11/15/08 100 99 Rogers Wireless 9.625%, 05/01/11 100 113 7.250%, 12/15/12 50 52 Rural Cellular 9.750%, 01/15/10 200 201 Telenet Group Holding (A) (B) 9.651%, 06/15/14 22 19 Time Warner Telecom Holdings 9.250%, 02/15/14 100 105 Triton PCS 8.500%, 06/01/13 150 139 UbiquiTel Operating 9.875%, 03/01/11 150 163 ----------------------------------------------------------------------------- TOTAL TELEPHONES & TELECOMMUNICATIONS 3,468 ============================================================================= TRANSPORTATION SERVICES [1.7%] American Commercial Lines 9.500%, 02/15/15 97 105 Kansas City Southern 9.500%, 10/01/08 100 104 NCL 10.625%, 07/15/14 100 97 Ship Finance 8.500%, 12/15/13 200 193 Stena 7.000%, 12/01/16 200 189 ----------------------------------------------------------------------------- TOTAL TRANSPORTATION SERVICES 688 ============================================================================= WASTE DISPOSAL [0.2%] Allied Waste North America, Ser B 7.125%, 05/15/16 100 99 ============================================================================= SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 44 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- HIGH YIELD BOND FUND (CONCLUDED) DESCRIPTION FACE AMOUNT (000)/SHARES VALUE (000) - -------------------------------------------------------------------------------- WHOLESALE [0.2%] Collins & Aikman Floor Cover, Ser B 9.750%, 02/15/10 $ 100 $ 100 ============================================================================= TOTAL CORPORATE BONDS (Cost $39,734) 39,698 ========================================================================= COMMON STOCK [0.2%] COMMERCIAL SERVICES [0.0%] Magellan Health Services* 69 3 ============================================================================= RETAIL [0.2%] Crunch Equity Holding* 56 57 ============================================================================= TOTAL COMMON STOCK (Cost $61) 60 ========================================================================= CASH EQUIVALENTS [1.8%] Evergreen Select Money Market, Institutional Class, 5.20%** 373,441 373 Fidelity Institutional Domestic Money Market Portfolio, Cl I, 5.22%** 373,441 373 ----------------------------------------------------------------------------- TOTAL CASH EQUIVALENTS (Cost $746) 746 ========================================================================= WARRANTS [0.0%] Dayton Superior, Expires 06/15/09* (A) 100 -- Diva Systems, Expires 03/01/08* (A) 600 -- Pliant, Expires 06/01/10* (A) 100 -- ----------------------------------------------------------------------------- TOTAL WARRANTS (Cost $0) -- ========================================================================= TOTAL INVESTMENTS [99.0%] (Cost $40,541) 40,504 ========================================================================= OTHER ASSETS AND LIABILITIES [1.0%] 428 ========================================================================= NET ASSETS -- 100.0% $ 40,932 ============================================================================= DESCRIPTION - -------------------------------------------------------------------------------- * NON-INCOME PRODUCING SECURITY ** RATE SHOWN IS THE 7-DAY EFFECTIVE YIELD AS OF SEPTEMBER 30, 2006. (A) SECURITY SOLD WITHIN THE TERMS OF A PRIVATE PLACEMENT MEMORANDUM, EXEMPT FROM REGISTRATION UNDER SECTION 144A OF THE SECURITIES ACT OF 1933, AS AMENDED, AND MAY BE SOLD ONLY TO DEALERS IN THAT PROGRAM OR OTHER "ACCREDITED INVESTORS." THE TOTAL VALUE OF THESE SECURITIES AS OF SEPTEMBER 30, 2006 WAS $4,568 (000) AND REPRESENTS 11.2% OF NET ASSETS. (B) STEP BOND -- THE RATE REFLECTED ON THE SCHEDULE OF INVESTMENTS IS THE RATE IN EFFECT ON SEPTEMBER 30, 2006. THE COUPON ON A STEP BOND CHANGES ON A SPECIFIC DATE. (C) FLOATING RATE SECURITY -- THE RATE REFLECTED ON THE SCHEDULE OF INVESTMENTS IS THE RATE IN EFFECT ON SEPTEMBER 30, 2006. (D) IN DEFAULT ON INTEREST PAYMENTS CL -- CLASS SER -- SERIES AMOUNTS DESIGNATED AS "--" ARE EITHER $0 OR HAVE BEEN ROUNDED TO $0. SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 45 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- PRIME MONEY MARKET FUND [THE FOLLOWING TABLE WAS REPRESENTED BY A BAR CHART IN THE PRINTED MATERIAL.] SECTOR WEIGHTINGS (UNAUDITED)*: 44.7% Commercial Paper 39.4% Repurchase Agreements 5.5% Certificate of Deposit 5.5% U.S. Government Agency Obligations 3.7% Corporate Bond 1.2% Mortgage-Backed 0.0% Cash Equivalent * Percentages are based on total investments. - -------------------------------------------------------------------------------- DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- COMMERCIAL PAPER (A) [45.0%] ASSET BACKED SECURITIES [15.5%] Amsterdam Funding 5.260%, 10/05/06 $ 25,000 $ 24,986 Barton Capital 5.260%, 11/03/06 25,000 24,880 Duke Funding High Grade 5.285%, 10/23/06 25,000 24,919 Kitty Hawk Funding 5.255%, 10/20/06 25,000 24,931 Laguna (C) 5.300%, 12/18/06 25,000 24,713 Premier Asset 5.260%, 10/20/06 10,000 9,972 Ranger Funding 5.260%, 10/05/06 25,000 24,985 Windmill Funding 5.260%, 10/05/06 25,000 24,985 Yorktown Capital (C) 5.260%, 10/30/06 25,000 24,894 -------------------------------------------------------------------------- TOTAL ASSET BACKED SECURITIES 209,265 ========================================================================== BANKS [7.4%] BNP Paribas Finance 5.245%, 10/11/06 25,000 24,964 Dexia Delaware 5.225%, 10/06/06 25,000 24,982 Lloyds TSB Bank 5.250%, 10/02/06 25,000 24,996 Societe Generale 5.250%, 10/04/06 25,000 24,989 -------------------------------------------------------------------------- TOTAL BANKS 99,931 ========================================================================== FINANCE AUTO LOANS [5.5%] American Honda Finance 5.220%, 10/11/06 25,000 24,964 5.450%, 01/26/07 (C) 25,000 25,000 Toyota Motor Credit 5.240%, 10/31/06 25,000 24,891 -------------------------------------------------------------------------- TOTAL FINANCE AUTO LOANS 74,855 ========================================================================== DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- FINANCIAL SERVICES [3.7%] Citigroup Funding 5.240%, 10/06/06 $ 25,000 $ 24,982 General Electric Capital 5.240%, 10/17/06 25,000 24,942 -------------------------------------------------------------------------- TOTAL FINANCIAL SERVICES 49,924 ========================================================================== INSURANCE [3.7%] Prudential Funding 5.230%, 10/02/06 25,000 24,996 5.220%, 10/12/06 25,000 24,960 -------------------------------------------------------------------------- TOTAL INSURANCE 49,956 ========================================================================== PERSONAL CREDIT INSTITUTIONS [1.8%] ING Funding 5.230%, 10/26/06 25,000 24,909 ========================================================================== RETAIL [1.9%] Wal-Mart Stores 5.200%, 10/04/06 25,000 24,989 ========================================================================== SECURITY BROKERS & DEALERS [5.5%] Bearn Stearns 5.250%, 10/23/06 25,000 24,920 Merrill Lynch 5.230%, 10/04/06 25,000 24,989 Morgan Stanley 5.260%, 10/05/06 25,000 24,985 -------------------------------------------------------------------------- TOTAL SECURITY BROKERS & DEALERS 74,894 ========================================================================== TOTAL COMMERCIAL PAPER (Cost $608,723) 608,723 ===================================================================== CERTIFICATES OF DEPOSIT [5.5%] Barclays Bank 5.450%, 10/25/06 25,000 25,000 Deutsche Bank New York 5.310%, 12/07/06 25,000 25,000 First Tennessee Bank 5.440%, 10/23/06 25,000 25,000 -------------------------------------------------------------------------- TOTAL CERTIFICATES OF DEPOSIT (Cost $75,000) 75,000 ===================================================================== SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 46 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- PRIME MONEY MARKET FUND (CONTINUED) DESCRIPTION FACE AMOUNT (000)/SHARES VALUE (000) - -------------------------------------------------------------------------------- U.S. GOVERNMENT AGENCY OBLIGATIONS [5.5%] FHLB 4.550%, 12/29/06 $ 5,000 $ 5,000 4.600%, 01/08/07 5,000 5,000 4.580%, 02/07/07 5,000 5,000 5.490%, 02/22/07 5,000 5,000 5.200%, 02/22/07 5,000 5,000 5.080%, 02/22/07 10,000 9,979 4.870%, 03/12/07 5,000 5,000 4.250%, 04/16/07 5,000 4,977 5.500%, 07/27/07 (B) 5,000 5,000 5.550%, 08/08/07 5,000 5,000 5.250%, 10/26/07 5,000 5,000 FNMA 4.750%, 01/02/07 5,000 4,991 4.000%, 02/28/07 10,000 9,947 -------------------------------------------------------------------------- TOTAL U.S. GOVERNMENT AGENCY OBLIGATIONS (Cost $74,894) 74,894 ===================================================================== CORPORATE BONDS [3.7%] BANKS [1.8%] Bank of America 5.310%, 11/07/06 25,000 25,000 ========================================================================== FINANCIAL SERVICES [1.9%] SLM, Ser A, MTN 5.625%, 04/10/07 25,000 25,022 ========================================================================== TOTAL CORPORATE BONDS (Cost $50,022) 50,022 ===================================================================== MORTGAGE-BACKED SECURITY [1.2%] Capital Auto Receivable Asset Trust, Ser 06, Cl SN-1, 5.440%, 09/20/07 16,194 16,194 -------------------------------------------------------------------------- TOTAL MORTGAGE-BACKED SECURITY (Cost $16,194) 16,194 ===================================================================== CASH EQUIVALENT [0.0%] Fidelity Institutional Domestic Money Market Portfolio, Cl I, 5.22%* 202,758 203 -------------------------------------------------------------------------- TOTAL CASH EQUIVALENT (Cost $203) 203 ===================================================================== DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- REPURCHASE AGREEMENTS (D) [39.6%] Banc of America 5.330%, dated 09/29/06, repurchased on 10/02/06, repurchase price $125,055,521 (collateralized by a U.S. Goverment obligation; par value $155,544,026, 5.000%, 03/01/35; with total market value $127,500,000) $ 125,000 $ 125,000 Barclay Bank 5.350%, dated 09/29/06, repurchased on 10/02/06, repurchase price, $135,260,277 (collateralized by U.S. Government obligations, ranging in par value $3,026,075-$150,000,000, 4.929%-6.444%, 02/01/23- 09/01/36; with total market value $137,904,001) 135,200 135,200 Bear Stearns 5.370%, dated 09/29/06, repurchased on 10/02/06, repurchase price $125,055,937 (collateralized by various U.S. Government obligations, ranging in par value $4,825,844-$12,325,000, 5.000%-7.000%, 12/01/18- 10/01/36; with total market value $127,502,530) 125,000 125,000 Lehman Brothers 5.380%, dated 09/29/06, repurchased on 10/02/06, repurchase price $25,011,208 (collateralized by a U.S. Government obligation, par value $25,235,000, 6.000%, 09/01/36; with total market value $25,502,325) 25,000 25,000 SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 47 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- PRIME MONEY MARKET FUND (CONCLUDED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Nomura 5.400%, dated 09/29/06, repurchased on 10/02/06, repurchase price $125,056,250 (collateralized by various U.S. Government obligations, ranging in par value $1,896,666-$150,000,000, 3.969%-6.971%, 03/01/18- 09/01/36; with total market value $127,500,000) $ 125,000 $ 125,000 -------------------------------------------------------------------------- TOTAL REPURCHASE AGREEMENTS (Cost $535,200) 535,200 ===================================================================== TOTAL INVESTMENTS [100.5%] (Cost $1,360,236) 1,360,236 ===================================================================== OTHER ASSETS AND LIABILITIES [-0.5%] (7,346) ===================================================================== NET ASSETS -- 100.0% $ 1,352,890 ================================================================================ (A) THE RATE REPORTED IS THE EFFECTIVE YIELD AT TIME OF PURCHASE. (B) STEP BOND -- THE RATE REFLECTED ON THE SCHEDULE OF INVESTMENTS IS THE RATE IN EFFECT ON SEPTEMBER 30, 2006. THE COUPON ON A STEP BOND CHANGES ON A SPECIFIC DATE. (C) SECURITY EXEMPT FROM REGISTRATION UNDER RULE 144A OF THE SECURITIES ACT OF 1933. THESE SECURITIES MAY BE RESOLD IN TRANSACTIONS EXEMPT FROM REGISTRATION NORMALLY TO QUALIFIED INSTITUTIONS. ON SEPTEMBER 30, 2006, THE VALUE OF THESE SECURITIES AMOUNTED TO $74,607, REPRESENTING 5.5% OF THE NET ASSETS OF THE FUND. (D) TRI-PARTY REPURCHASE AGREEMENT * RATE REPORTED IS THE 7-DAY EFFECTIVE YIELD AS OF SEPTEMBER 30, 2006. CL -- CLASS FHLB -- FEDERAL HOME LOAN BANK FNMA -- FEDERAL NATIONAL MORTGAGE ASSOCIATION MTN -- MEDIUM TERM NOTE SER -- SERIES SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 48 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- GOVERNMENT MONEY MARKET FUND [THE FOLLOWING TABLE WAS REPRESENTED BY A BAR CHART IN THE PRINTED MATERIAL.] SECTOR WEIGHTING (UNAUDITED)*: 63.1% U.S. Government Agency Obligations 36.9% Repurchase Agreements * Percentages are based on total investments. - -------------------------------------------------------------------------------- DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- U.S. GOVERNMENT AGENCY OBLIGATIONS [64.9%] FFCB (A) 5.100%, 10/02/06 $ 50,000 $ 49,993 5.100%, 10/03/06 155,000 154,956 5.070%, 10/04/06 50,000 49,979 5.120%, 10/06/06 32,660 32,637 FHLB 5.130%, 10/02/06 (A) 81,250 81,238 5.090%, 10/03/06 (A) 300,000 299,915 5.080%, 10/04/06 (A) 100,000 99,958 5.000%, 10/13/06 25,000 25,000 5.170%, 10/18/06 (A) 100,000 99,757 5.130%, 10/20/06 (A) 50,000 49,865 4.550%, 12/29/06 25,000 25,000 4.600%, 01/08/07 25,000 25,000 5.250%, 01/16/07 25,000 25,000 4.580%, 02/07/07 25,000 25,000 5.490%, 02/22/07 25,000 25,000 5.200%, 02/22/07 25,000 25,000 5.080%, 02/22/07 25,000 24,947 4.870%, 03/12/07 25,000 25,000 4.250%, 04/16/07 20,000 19,909 4.625%, 05/18/07 36,010 35,883 5.500%, 07/27/07 (B) 25,000 25,000 5.550%, 08/08/07 25,000 25,000 5.375%, 08/28/07 10,000 10,000 5.320%, 09/14/07 25,000 25,000 5.500%, 10/02/07 25,000 25,000 5.260%, 10/23/07 25,000 25,000 5.250%, 10/26/07 37,060 37,060 FNMA 4.750%, 01/02/07 42,997 42,920 2.500%, 01/30/07 5,300 5,251 4.000%, 02/28/07 25,000 24,866 -------------------------------------------------------------------------- TOTAL U.S. GOVERNMENT AGENCY OBLIGATIONS (Cost $1,444,134) 1,444,134 ===================================================================== DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- REPURCHASE AGREEMENTS (C) [37.9%] Bank of America 5.330%, dated 09/29/06, repurchased on 10/02/06, repurchase price $150,066,625 (collaterized by U.S. Government obligations, ranging in par value $32,250,307-$153,855,805, 5.000%, 03/01/35-07/01/35; with total market value $153,000,000) $ 150,000 $ 150,000 Barclay Bank 5.350%, dated 09/29/06, repurchased on 10/02/06, repurchase price $193,286,135 (collateralized by U.S. Government obligations, ranging in par value $40,826,933-$61,183, 315, 5.000%-6.592%, 07/01/20- 06/01/36; with total market value $197,064,001) 193,200 193,200 Bear Stearns Inc. & Co. 5.370%, dated 09/29/06, repurchased on 10/02/06, repurchase price $175,078,312 (collateralized by U.S. Treasury obligations, ranging in par value $1,465,000-$11,897,393, 4.500%-7.500%, 04/01/13- 09/01/36, with total market value $178,502,511) 175,000 175,000 Deutsche Bank 5.330%, dated 09/29/06, repurchased on 10/02/06, repurchase price $100,044,417 (collateralized by U.S. Government obligations, ranging in par value $20,764,040-$43,000,000, 5.000%-6.500%, 08/25/15- 08/25/32; with total market value $102,000,001) 100,000 100,000 SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 49 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- GOVERNMENT MONEY MARKET FUND (CONCLUDED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Lehman Brothers 5.380%, dated 09/29/06, repurchased on 10/02/06, repurchase price $25,011,208 (collateralized by U.S. Government obligation, par value $25,235,000, 6.000%, 09/01/36; with total market value $25,502,325) $ 25,000 $ 25,000 Nomura 5.400%, dated 09/29/06, repurchased on 10/02/06, repurchase price $150,067,500 (collaterized by U.S. Government obligations, ranging in par value $455,000-$100,000,000, 4.002%-7.661%, 06/01/16- 05/01/36; with total market value $153,000,001) 150,000 150,000 UBS Warburg 5.300%, dated 09/29/06, repurchased on 10/02/06, repurchase price $50,022,083 (collateralized by U.S. Government obligations, ranging in par value $7,490,000-$33,010,867, 5.500%-6.500%, 11/01/34- 08/01/36; with total market value $51,002,935) 50,000 50,000 -------------------------------------------------------------------------- TOTAL REPURCHASE AGREEMENTS (Cost $843,200) 843,200 ===================================================================== TOTAL INVESTMENTS [102.8%] (Cost $2,287,334) 2,287,334 ===================================================================== OTHER ASSETS AND LIABILITIES [-2.8%] (61,867) ===================================================================== NET ASSETS -- 100.0% $ 2,225,467 ========================================================================== DESCRIPTION - -------------------------------------------------------------------------------- (A) THE RATE REPORTED IS THE EFFECTIVE YIELD AT TIME OF PURCHASE. (B) STEP BOND -- THE RATE REFLECTED ON THE SCHEDULE OF INVESTMENTS IS THE RATE IN EFFECT ON SEPTEMBER 30, 2006. THE COUPON ON A STEP BOND CHANGES ON A SPECIFIC DATE. (C) TRI-PARTY REPURCHASE AGREEMENT FFCB -- FEDERAL FARM CREDIT BANK FHLB -- FEDERAL HOME LOAN BANK FNMA -- FEDERAL NATIONAL MORTGAGE ASSOCIATION SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 50 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- CALIFORNIA TAX EXEMPT MONEY MARKET FUND [THE FOLLOWING TABLE WAS REPRESENTED BY A BAR CHART IN THE PRINTED MATERIAL.] SECTOR WEIGHTINGS (UNAUDITED)*: 13.9% General Revenue 12.9% General Obligation 11.3% Water 10.6% Housing 10.2% Power 8.9% Industrial Development 7.4% Utilities 7.1% Education 7.0% Transportation 4.7% Public Facilities 4.4% Healthcare 1.1% Commercial Paper 0.5% Equipment * Percentages based on total investments. - -------------------------------------------------------------------------------- DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- MUNICIPAL BOND [97.5%] CALIFORNIA [96.4%] ABAG, Finance Authority for Non-Profit Corporations, Hamlin School Project, Ser A, GO (A) (B) (C) 3.610%, 08/01/32 $ 1,500 $ 1,500 ABAG, Finance Authority for Non-Profit Corporations, Public Policy Institute, Ser A, RB (A) (B) (C) 3.610%, 11/01/31 2,955 2,955 ABAG, Finance Authority for Non-Profit Corporations, School of the Sacred Heart, Ser B, RB (A) (B) (C) 3.750%, 06/01/30 8,100 8,100 ABAG, Finance Authority for Non-Profit Corporations, Ser C, COP (A) (B) (C) 3.700%, 10/01/27 9,710 9,710 ABAG, Finance Authority for Non-Profit Corporations, Ser D, COP (A) (B) (C) 3.700%, 10/01/27 2,500 2,500 ABAG, Financial Authority for Non-Profit Corporations, Jewish Community Center Project, RB (A) (B) (C) 3.790%, 11/15/31 13,270 13,270 Anaheim, Multi-Family Housing Authority, Heritage Village Apartments Project, Ser A, RB (A) (B) (D) 3.610%, 07/15/33 4,685 4,685 Berkeley, Unified School District, TRAN 4.500%, 11/01/06 6,000 6,008 DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Berkeley, YMCA Project, RB (A) (B) (C) 3.610%, 06/01/23 $ 1,850 $ 1,850 Califonia State, Community College Financing Authority, Ser A, TRAN, FSA 4.500%, 06/29/07 4,500 4,528 California State, Bay Area Toll Authority, San Francisco Bay Area Project, Ser A, RB, AMBAC (A) (B) 3.580%, 04/01/39 12,800 12,800 California State, Daily Kindergarten University, Ser A-5, GO (A) (B) (C) 3.600%, 05/01/34 8,000 8,000 California State, Daily Kindergarten University, Ser B-1, GO (A) (B) (C) 3.650%, 05/01/34 3,400 3,400 California State, Department of Water Resource & Power, Ser A, RB, MBIA (A) (B) 5.250%, 05/01/07 2,590 2,614 California State, Department of Water Resource & Power, Ser B-1, RB (A) (B) (C) 3.800%, 05/01/22 6,000 6,000 California State, Department of Water Resource & Power, Ser B-2, RB (A) (B) (C) 3.660%, 05/01/22 5,870 5,870 California State, Department of Water Resource & Power, Ser C-15, RB (A) (B) (C) 3.650%, 05/01/22 5,000 5,000 California State, Department of Water Resource & Power, Sub-Ser F-2, RB (A) (B) (C) 3.700%, 05/01/20 2,000 2,000 California State, Department of Water Resource & Power, Sub-Ser G-3, RB, FSA (A) (B) 3.590%, 05/01/16 1,050 1,050 California State, Department of Water Resource & Power, Sub-Ser G-4, RB, FSA (A) (B) 3.600%, 05/01/16 10,000 10,000 California State, Department of Water Resourse & Power, Ser B-6, RB (A) (B) (C) 3.650%, 05/01/22 1,200 1,200 SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 51 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- CALIFORNIA TAX EXEMPT MONEY MARKET FUND (CONTINUED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- California State, Economic Development Financing Authority, KQED Project, RB (A) (B) (C) 3.570%, 04/01/20 $ 1,300 $ 1,300 California State, Economic Recovery Authority, Ser C-1, RB (A) (B) 3.650%, 07/01/23 3,250 3,250 California State, Economic Recovery Authority, Ser C-10, RB (A) (B) (C) 3.600%, 07/01/23 7,810 7,810 California State, Economic Recovery Authority, Ser C-12, RB (A) (B) 3.580%, 07/01/23 1,100 1,100 California State, Economic Recovery Authority, Ser C-13, RB, XLCA (A) (B) 3.680%, 07/01/23 5,000 5,000 California State, Economic Recovery Authority, Ser C-3, RB (A) (B) 3.650%, 07/01/23 2,485 2,485 California State, Economic Recovery Authority, Ser C-7, RB (A) (B) (C) 3.600%, 07/01/23 5,350 5,350 California State, Economic Recovery Authority, Ser C-8, RB (A) (B) (C) 3.650%, 07/01/23 3,000 3,000 California State, Educational Facilities Authority, Chapman University Project, RB (A) (B) (C) 3.570%, 12/01/30 1,000 1,000 California State, Educational Facilities Authority, University San Francisco, RB (A) (B) (C) 3.500%, 05/01/30 5,200 5,200 California State, Health Facilities Finance Authority, Adventist Health Systems Project, Ser B, RB (A) (B) (C) 3.800%, 09/01/25 4,400 4,400 California State, Health Facilities Finance Authority, Adventist Hospital Project, Ser B, RB, MBIA (A) (B) 3.790%, 09/01/28 1,200 1,200 DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- California State, Infrastructure & Economic Authority, Asian Art Museum Foundation Project, RB, MBIA (A) (B) 3.790%, 06/01/34 $ 14,000 $ 14,000 California State, Infrastructure & Economic Authority, Colburn School Project, Ser B, RB (A) (B) (C) 3.600%, 08/01/37 3,655 3,655 California State, Infrastructure & Economic Authority, J Paul Getty Trust Project, Ser D, RB (A) 3.250%, 04/01/33 10,000 10,000 California State, Ser A-3, GO 3.650%, 05/01/33 14,000 14,000 California State, Ser B, Sub-Ser B-1, GO (A) (B) (C) 3.590%, 05/01/40 15,000 15,000 California State, Ser B, Sub-Ser B-6, GO (A) (B) (C) 3.650%, 05/01/40 8,700 8,700 California State, Ser B-1, GO (A) (B) (C) 3.580%, 05/01/33 7,000 7,000 California State, Weekly Kindgarten University, Ser B-5, GO (A) (B) (C) 3.590%, 05/01/34 11,525 11,525 California Statewide, Communities Development Authority, Childrens Hospital Project, Ser A, RB, AMBAC (A) (B) 3.580%, 08/15/32 1,300 1,300 California Statewide, Communities Development Authority, Childrens Hospital Project, Ser B, RB, AMBAC (A) (B) 3.580%, 08/15/32 1,800 1,800 California Statewide, Communities Development Authority, North Peninsula Jewish Project, RB (A) (B) (C) 3.790%, 07/01/34 6,300 6,300 California Statewide, Communities Development Authority, Monterey County Project, Ser A-3, TRAN 4.500%, 06/29/07 5,000 5,033 SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 52 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- CALIFORNIA TAX EXEMPT MONEY MARKET FUND (CONTINUED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Corona, Multi-Family Housing Authority, Country Hills Project, Ser A, RB (A) (B) (D) 3.600%, 02/01/25 $ 6,475 $ 6,475 East Bay, Municipal Utilities District Authority, Ser A, RB, FSA (A) (B) 3.570%, 06/01/25 5,220 5,220 East Bay, Municipal Utilities District Authority, Sub-Ser 1, RB, XLCA (A) (B) 3.580%, 06/01/38 6,700 6,700 East Bay, Municipal Utilities District Authority, Sub-Ser B-1, RB, XLCA (A) (B) 3.580%, 06/01/38 14,965 14,965 East Bay, Municipal Utilities District Authority, Sub-Ser B-3, RB, XLCA (A) (B) 3.600%, 06/01/38 4,985 4,985 Eastern California, Municipal Water District, COP, Ser B, TA, FGIC (A) (B) 3.600%, 07/01/20 5,000 5,000 Fremont, Family Center Finance Project, COP (A) (B) (C) 3.600%, 08/01/28 4,300 4,300 Fremont, Office Building Improvement & Fire Equipment Project, COP (A) (B) (C) 3.600%, 08/01/30 3,345 3,345 Fresno, Multi-Family Housing Authority, Stonepine Apartment Project, Ser A, RB (A) (B) (D) 3.600%, 02/15/31 2,095 2,095 Fresno, Palm Lakes Apartment Project, RB (A) (B) (C) 3.700%, 05/01/15 3,615 3,615 Glendale, Police Building Project, COP (A) (B) 3.680%, 06/01/30 19,600 19,600 Grant, Joint Union High School District, School Facility Bridge Funding Project, COP, FSA (A) (B) 3.600%, 09/01/34 1,000 1,000 DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Huntington Beach, Union High School District, School Facility Bridge Funding Project, COP, FSA (A) (B) 3.600%, 09/01/28 $ 1,890 $ 1,890 Irvine Ranch, Water District #140-240-105-250, GO (A) (B) (C) 3.650%, 04/01/33 4,525 4,525 Irvine Ranch, Water District, GO (A) (B) (C) 3.650%, 01/01/21 9,000 9,000 Irvine, Improvement Board, Act 1915 Project, District #03-19, Ser B, SAB (A) (B) 3.650%, 09/02/29 2,000 2,000 Irvine, Improvement Board, Act 1915 Project, District #05-21, Ser A, RB (A) (B) (C) 3.650%, 09/02/31 12,000 12,000 Irvine, Improvement Board, Act 1915 Project, District #87-8, SAB (A) (B) (C) 3.650%, 09/02/24 1,100 1,100 Irvine, Improvement Board, Act 1915 Project, District #93-14, SAB (A) (B) (C) 3.650%, 09/02/25 16,670 16,670 Kern County, TRAN 4.500%, 06/29/07 5,000 5,036 Kings County, Multi-Family Housing Authority, Edgewater Isle Apartments Project, Ser A, RB (A) (B) (D) 3.600%, 02/15/31 13,410 13,410 Lemon Grove, Multifamily Housing, Hillside Terrace Project, RB (A) (B) (D) 3.600%, 02/15/31 4,955 4,955 Lodi, Electric System Authority, Ser A, COP, MBIA (A) (B) 3.580%, 07/01/32 9,360 9,360 Los Angeles County, Multi- Family Housing Authority, Malibu Canyon Apartments Project, Ser B, RB (A) (B) (C) 3.620%, 06/01/10 8,000 8,000 Los Angeles County, Sanitation Districts Financing Authority, Capital Project, Ser A, RB, FSA 5.000%, 10/01/06 1,210 1,210 SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 53 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- CALIFORNIA TAX EXEMPT MONEY MARKET FUND (CONTINUED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Los Angeles County, Ser A, TRAN 4.500%, 06/29/07 $ 13,000 $ 13,093 Los Angeles, Department of Water & Power, Sub-Ser B-1, RB (A) (B) 3.680%, 07/01/35 11,000 11,000 Los Angeles, Department of Water & Power, Sub-Ser B-3, RB (A) (B) 3.640%, 07/01/35 3,600 3,600 Los Angeles, Department of Water, Sub-Ser -2, RB (A) (B) 3.650%, 07/01/35 2,000 2,000 Los Angeles, Metropolitan Transit Commission, Ser A, RB, FGIC (A) (B) 3.570%, 07/01/12 5,330 5,330 Los Angeles, Metropolitan Transportation Authority, Proposition C, Ser A, RB, MBIA (A) (B) 3.600%, 07/01/20 11,015 11,015 Los Angeles, Samuel A Fryer Vavney, Ser A, COP (A) (B) (C) 3.570%, 08/01/21 7,000 7,000 Los Angeles, Unified School District, Administration Building Project, Ser A, COP, AMBAC (A) (B) 3.600%, 10/01/24 8,365 8,365 Los Angeles, Wastewater Systems, Sub-Ser B-1, RB, XLCA (A) (B) 3.520%, 06/01/28 4,480 4,480 Los Angeles, Water & Power Resource Authority, Power System Project, Sub-Ser A-7, RB (A) (B) 3.590%, 07/01/35 15,000 15,000 Los Angeles, Water & Power Resource Authority, Sub-Ser B-2, RB (A) (B) 3.650%, 07/01/34 2,000 2,000 Los Angeles, Water & Power Resource Authority, Sub-Ser B-6, RB (A) (B) 3.790%, 07/01/34 9,675 9,675 Los Angeles, Water & Power Resource Authority, Subser B-3, RB (A) (B) 3.700%, 07/01/34 10,700 10,700 DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Moorpark, Unified School District, Ser A, COP, FSA (A) (B) 3.600%, 11/01/28 $ 1,000 $ 1,000 Newport Beach, Hoag Memorial Hospital, Ser A, RB (A) (B) 3.670%, 10/01/26 5,700 5,700 Newport Beach, Hoag Memorial Hospital, Ser B, RB (A) (B) 3.670%, 10/01/26 1,045 1,045 Newport Beach, Hoag Memorial Hospital, Ser C, RB (A) (B) 3.670%, 10/01/26 7,870 7,870 Oakland, Capital Equipment Project, COP (A) (B) (C) 3.680%, 12/01/15 3,890 3,890 Oakland-Alameda County, Coliseum Project, Ser C-1, RB (A) (B) (C) 3.630%, 02/01/25 15,000 15,000 Orange County, Apartment Development Authority, Bear Brand Apartments Project, RB (A) (B) (D) 3.580%, 11/01/07 1,900 1,900 Orange County, Apartment Development Authority, Hidden Hills Project, Ser C, RB (A) (B) 3.620%, 11/01/09 3,200 3,200 Orange County, Apartment Development Authority, Larkspur Canyon Apartments, Ser A, RB (A) (B) (D) 3.590%, 06/15/37 1,200 1,200 Orange County, Apartment Development Authority, Riverbend Apartments Project, Ser B, RB (A) (B) (D) 3.590%, 12/01/29 5,000 5,000 Orange County, Apartment Development Authority, Seaside Meadow Project, Ser C, RB (A) (B) (D) 3.580%, 08/01/08 8,000 8,000 Orange County, Sanitation District Authority, Ser A, COP (A) (B) 3.650%, 08/01/29 11,755 11,755 SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 54 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- CALIFORNIA TAX EXEMPT MONEY MARKET FUND (CONTINUED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Orange County, Sanitation District Authority, Ser B, COP (A) (B) 3.650%, 08/01/30 $ 1,300 $ 1,300 Orange County, Water District Authority, Ser A, COP (A) (B) 3.570%, 08/01/42 2,800 2,800 Pasadena, Public Financing Authority, Rose Bowl Refinancing & Improvement Project, RB (A) (B) (C) 3.550%, 12/01/23 5,000 5,000 Riverside County, Ser C, COP (A) (B) (C) 3.650%, 12/01/15 15,700 15,700 Riverside, Unified School District, Ser C, School Facility Bridge Funding Project, COP, FSA (A) (B) 3.600%, 09/01/27 1,610 1,610 Sacramento County, Housing Authority, Bent Tree Apartments Project, Ser A, RB (A) (B) (D) 3.600%, 02/15/31 2,500 2,500 Sacramento County, TRAN 4.500%, 07/17/07 7,000 7,048 San Bernardino County, Housing Authority, Alta Loma Heritage Project, Ser A, RB (A) (B) (C) 3.620%, 02/01/23 1,354 1,354 San Diego County, School District, Ser A, TRAN 4.500%, 07/27/07 6,000 6,038 San Diego, Museum of Art Project, COP (A) (B) (C) 3.750%, 09/01/30 1,400 1,400 San Diego, Unified School District, Ser A, TRAN 4.500%, 07/24/07 4,000 4,025 San Francisco (City & County), Housing Authority, Bayside Village Project D, Ser A, RB (A) (B) (C) 3.620%, 12/01/16 6,000 6,000 San Francisco City & County, Moscone Center Expansion Project, Ser 2, RB, AMBAC (A) (B) 3.580%, 04/01/30 1,150 1,150 DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- San Francisco, Bay Area Toll Authority, Ser A, RB, AMBAC (A) (B) 3.580%, 04/01/36 $ 15,850 $ 15,850 San Francisco, Bay Area Toll Authority, Ser C, RB, AMBAC (A) (B) 3.570%, 04/01/25 5,650 5,650 San Francisco, Building Authority, Civic Center Complex Project, Ser A, RB, AMBAC Pre-Refunded @ 102 (F) 5.250%, 12/01/16 1,000 1,023 San Jose, Redevelopment Agency, Merged Area Redevelopment Project, Ser A, RB (A) (B) (C) 3.570%, 07/01/26 3,100 3,100 Santa Barbara County, Schools Financing Authority, TRAN 4.500%, 06/29/07 2,000 2,012 Santa Clara County, Financing Authority, VMC Facility Replacement Project, Ser B, RB (A) (B) 3.600%, 11/15/25 12,375 12,375 Santa Clara Valley, Transportation Authority, Ser A, RB, AMBAC (A) (B) 3.600%, 06/01/26 6,300 6,300 Santa Cruz County, TRAN 4.500%, 06/29/07 5,000 5,031 South Coast, Local Education Agencies, Ser A, TRAN 4.500%, 06/29/07 2,000 2,015 Southern California, Metro Water District Authority, Waterworks Authorization, Ser B-4 (A) (B) 3.570%, 07/01/35 5,000 5,000 Southern California, Metropolitan Water District Authority, Ser B, RB (A) (B) 3.580%, 07/01/27 2,100 2,100 Southern California, Metropolitan Water District Authority, Ser B-3, RB (A) (B) 3.650%, 07/01/35 8,600 8,600 Southern California, Metropolitan Water District Authority, Ser C-2, RB (A) (B) 3.600%, 07/01/36 4,650 4,650 SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 55 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- CALIFORNIA TAX EXEMPT MONEY MARKET FUND (CONTINUED) DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Southern California, Metropolitan Water District Authority, Water Works Authorization, Ser B, RB (A) (B) 3.580%, 07/01/28 $ 4,000 $ 4,000 Southern California, Metropolitan Water District, Ser A, RB (A) (B) 3.640%, 07/01/25 3,800 3,800 Southern California, Metropolitan Water District, Ser C-1, RB (A) (B) 3.570%, 07/01/30 5,000 5,000 Southern California, Metropolitan Water District, Ser C-3, RB (A) (B) 3.570%, 07/01/30 6,200 6,200 Southern California, Public Power Authority, Southern Transmission Project, RB, AMBAC (A) (B) (C) 3.580%, 07/01/19 8,000 8,000 State of California, Economic Recovery Authority, Ser C-2, RB (A) (B) (D) 3.650%, 07/01/23 2,250 2,250 State of California, Ser B-3, GO (A) (B) (C) 3.600%, 05/01/33 6,100 6,100 Sunnyvale, Government Center Site Acquisition Project, Ser A, COP, AMBAC (A) (B) 3.610%, 04/01/31 4,300 4,300 Three Valleys, Municipal Water District Authority, Miramar Water Treatment Project, COP (A) (B) (C) 3.710%, 11/01/14 4,700 4,700 Turlock, Irrigation District, Capital Improvement & Refunding Project, COP (A) (B) (C) 3.790%, 01/01/31 9,350 9,350 Upland, Community Redevelopment Authority, Sunset Ridge & Village Apartments Project, RB (A) (B) (C) 3.590%, 12/01/29 6,700 6,700 Ventura County, TRAN 4.500%, 07/02/07 2,500 2,515 DESCRIPTION FACE AMOUNT (000) VALUE (000) - -------------------------------------------------------------------------------- Westminster, Civic Center Refinancing Program, Ser A, COP, AMBAC (A) (B) 3.610%, 06/01/22 $ 2,900 $ 2,900 Yolo County, Multi-Family Housing Authority, Primero Grove Project, Ser A, RB (A) (B) (C) 3.570%, 11/01/27 10,485 10,485 -------------------------------------------------------------------------- TOTAL CALIFORNIA 793,653 ========================================================================== MASSACHUSETTS [0.6%] Massachusetts State, Development & Finance Agency, Harvard University Project, Ser B-1, RB (A) (B) 3.750%, 07/15/36 5,000 5,000 ========================================================================== WASHINGTON [0.5%] Seattle, Municipal Light & Power Authority, RB (A) (B) (C) 3.700%, 06/01/21 4,300 4,300 ========================================================================== TOTAL MUNICIPAL BOND (Cost $802,953) 802,953 ===================================================================== COMMERCIAL PAPER (E) [1.1%] California State 3.470%, 10/03/06 9,000 9,000 ========================================================================== TOTAL INVESTMENTS [98.6%] (Cost $811,953) 811,953 ===================================================================== OTHER ASSETS AND LIABILITIES [1.4%] 11,670 ===================================================================== NET ASSETS -- 100.0% $ 823,623 ========================================================================== SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 56 schedule of investments SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- CALIFORNIA TAX EXEMPT MONEY MARKET FUND (CONCLUDED) DESCRIPTION - -------------------------------------------------------------------------------- (A) FLOATING RATE SECURITY -- THE RATE REFLECTED ON THE SCHEDULE OF INVESTMENTS IS THE RATE IN EFFECT ON SEPTEMBER 30, 2006. (B) PUT AND DEMAND FEATURE -- THE DATE REPORTED ON THE SCHEDULE OF INVESTMENTS IS THE FINAL MATURITY, NOT THE NEXT RESET OR PUT DATE. (C) SECURITIES ARE HELD IN CONJUNCTION WITH A LETTER OF CREDIT FROM A MAJOR BANK OR FINANCIAL INSTITUTION. (D) SECURITIES ARE COLLATERALIZED UNDER AN AGREEMENT FROM FHLMC/FNMA. (E) THE RATE REPORTED IS THE EFFECTIVE YIELD AT TIME OF PURCHASE. (F) PRE-REFUNDED SECURITY - THE MATURITY DATE SHOWN IS THE PRE-REFUNDED DATE. ABAG -- ASSOCIATION OF BAY AREA GOVERNMENTS AMBAC -- AMERICAN MUNICIPAL BOND ASSURANCE COMPANY COP -- CERTIFICATE OF PARTICIPATION FGIC -- FINANCIAL GUARANTY INSURANCE COMPANY FHLMC -- FEDERAL HOME LOAN MORTGAGE CORPORATION FNMA -- FEDERAL NATIONAL MORTGAGE ASSOCIATION FSA -- FINANCIAL SECURITY ASSISTANCE GO -- GENERAL OBLIGATION MBIA -- MUNICIPAL BOND INSURANCE ASSOCIATION RB -- REVENUE BOND SAB -- SPECIAL ASSESSMENT BOND SER -- SERIES TA -- TAX ALLOCATION TRAN -- TAX & REVENUE ANTICIPATION NOTE XLCA -- XL CAPITAL ASSURANCE SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 57 statements of assets and liabilities (000) SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- Large Cap Value Large Cap Growth RCB Small Cap Technology Equity Fund Equity Fund Value Fund Growth Fund ------------------------------------------------------------------ ASSETS: Cost of securities (including repurchase agreements) $ 88,821 $ 41,894 $ 56,814 $ 2,490 - --------------------------------------------------------------------------------------------------------------------------------- Investments in securities at value $ 106,039 $ 46,013 $ 66,466 $ 2,682 Repurchase agreements at value -- -- 3,053 -- Receivable for investment securities sold 2,830 1,330 274 -- Income receivable 136 28 114 1 Receivable for capital shares sold 102 31 1 2 Prepaid Expenses 1 1 1 -- - --------------------------------------------------------------------------------------------------------------------------------- Total Assets 109,108 47,403 69,909 2,685 - --------------------------------------------------------------------------------------------------------------------------------- LIABILITIES: Payable for investment securities purchased 2,851 1,140 -- -- Payable for income distributions 110 16 -- -- Payable for capital shares redeemed 6 -- 55 -- Investment adviser fees payable 53 25 49 2 Shareholder servicing fees payable 24 12 56 1 Administrative fees payable 5 2 3 -- Accrued expenses 9 3 5 -- - --------------------------------------------------------------------------------------------------------------------------------- Total Liabilities 3,058 1,198 168 3 - --------------------------------------------------------------------------------------------------------------------------------- NET ASSETS $ 106,050 $ 46,205 $ 69,741 $ 2,682 - --------------------------------------------------------------------------------------------------------------------------------- NET ASSETS Paid-in-Capital (unlimited authorization -- $0.01 par value) $ 83,636 $ 45,086 $ 55,935 $ 3,995 Undistributed (distributions in excess of) net investment income (2) (1) 3 -- Accumulated net realized gain (loss) on investments 5,198 (2,999) 1,098 (1,505) Net unrealized appreciation on investments 17,218 4,119 12,705 192 - --------------------------------------------------------------------------------------------------------------------------------- NET ASSETS $ 106,050 $ 46,205 $ 69,741 $ 2,682 - --------------------------------------------------------------------------------------------------------------------------------- Institutional Shares ($Dollars): Net Assets $92,945,293 $35,842,162 $13,435,095 $1,244,724 Total shares outstanding at end of year 8,971,363 4,622,315 475,646 289,773 Net asset value, offering and redemption price per share (net assets / shares outstanding) $ 10.36 $ 7.75 $ 28.25 $ 4.30 Class A Shares ($Dollars): Net Assets $13,104,250 $10,363,242 $10,470,133 $1,437,152 Total shares outstanding at end of year 1,266,627 1,350,243 374,234 339,378 Net asset value, offering and redemption price per share (net assets / shares outstanding) $ 10.35 $ 7.68 $ 27.98 $ 4.23 Class R Shares ($Dollars): Net Assets $ -- $ -- $45,835,513 $ -- Total shares outstanding at end of year -- -- 1,640,798 -- Net asset value and redemption price per share (net assets / shares outstanding) $ -- $ -- $ 27.93 $ -- Maximum offering price per share (net asset value / 96.50%) $ -- $ -- $ 28.94 $ -- AMOUNTS DESIGNATED AS "--" ARE EITHER $0 OR HAVE BEEN ROUNDED TO $0. SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 58 statements of assets and liabilities (000) SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- California Corporate Government Tax Exempt High Yield Bond Fund Bond Fund Bond Fund Bond Fund ------------------------------------------------------------------ ASSETS: Cost of securities $ 57,427 $ 37,369 $ 26,847 $ 40,541 - ---------------------------------------------------------------------------------------------------------------------------------- Investments in securities at value $ 57,052 $ 37,137 $ 26,924 $ 40,504 Cash 12 -- 1 -- Receivable for investment securities sold -- -- -- 152 Income receivable 704 313 349 903 Receivable for capital shares sold 17 121 -- 3 Prepaid Expenses 1 1 -- 1 - ---------------------------------------------------------------------------------------------------------------------------------- Total Assets 57,786 37,572 27,274 41,563 - ---------------------------------------------------------------------------------------------------------------------------------- LIABILITIES: Payable for investment securities purchased 962 -- -- 475 Payable for income distributions 159 96 43 101 Payable for capital shares redeemed 5 -- 11 5 Investment adviser fees payable 19 10 3 22 Shareholder servicing fees payable 12 8 6 13 Administrative fees payable 3 2 1 2 Accrued expenses 4 3 2 3 Payable to custodian -- -- -- 10 - ---------------------------------------------------------------------------------------------------------------------------------- Total Liabilities 1,164 119 66 631 - ---------------------------------------------------------------------------------------------------------------------------------- NET ASSETS $ 56,622 $ 37,453 $ 27,208 $ 40,932 - ---------------------------------------------------------------------------------------------------------------------------------- NET ASSETS Paid-in-Capital (unlimited authorization -- $0.01 par value) $ 57,332 $ 38,099 $ 27,174 $ 42,224 Undistributed net investment income 1 1 -- -- Accumulated net realized loss on investments (336) (415) (43) (1,255) Net unrealized appreciation (depreciation) on investments (375) (232) 77 (37) - ---------------------------------------------------------------------------------------------------------------------------------- NET ASSETS $ 56,622 $ 37,453 $ 27,208 $ 40,932 - ---------------------------------------------------------------------------------------------------------------------------------- Institutional Shares ($Dollars): Net Assets $55,290,256 $35,670,498 $26,073,962 $20,887,459 Total shares outstanding at end of year 5,438,882 3,470,224 2,544,904 2,332,240 Net asset value, offering and redemption price per share (net assets / shares outstanding) $ 10.17 $ 10.28 $ 10.25 $ 8.96 Class A Shares ($Dollars): Net Assets $ 1,332,049 $ 1,782,407 $ 1,134,367 $20,044,571 Total shares outstanding at end of year 130,949 173,035 110,426 2,238,216 Net asset value, offering and redemption price per share (net assets / shares outstanding) $ 10.17 $ 10.30 $ 10.27 $ 8.96 AMOUNTS DESIGNATED AS "--" ARE EITHER $0 OR HAVE BEEN ROUNDED TO $0. SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 59 statements of assets and liabilities (000) SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- California Prime Government Tax Exempt Money Money Money Market Fund Market Fund Market Fund ----------------------------------------------------- ASSETS: Cost of securities (including repurchase agreements) $ 1,360,236 $ 2,287,334 $ 811,953 - ------------------------------------------------------------------------------------------------------------------ Investments in securities at value $ 825,036 $ 1,444,134 $ 811,953 Repurchase agreements at value 535,200 843,200 -- Cash 4 58 11,101 Income receivable 2,647 5,196 3,841 Prepaid Expenses 16 35 12 - ------------------------------------------------------------------------------------------------------------------ Total Assets 1,362,903 2,292,623 826,907 - ------------------------------------------------------------------------------------------------------------------ LIABILITIES: Payable for investment securities purchased 5,000 62,060 2,016 Payable for income distributions 4,055 3,400 693 Investment adviser fees payable 280 493 131 Shareholder servicing fees payable 511 922 337 Administrative fees payable 62 105 39 Trustees' fees payable 1 2 1 Accrued expenses 104 174 67 - ------------------------------------------------------------------------------------------------------------------ Total Liabilities 10,013 67,156 3,284 - ------------------------------------------------------------------------------------------------------------------ NET ASSETS $ 1,352,890 $ 2,225,467 $ 823,623 - ------------------------------------------------------------------------------------------------------------------ NET ASSETS Paid-in-Capital (unlimited authorization -- $0.01 par value) $ 1,353,291 $ 2,225,465 $ 823,622 Undistributed net investment income 1 2 -- Accumulated net realized gain (loss) on investments (402) -- 1 - ------------------------------------------------------------------------------------------------------------------ NET ASSETS $ 1,352,890 $ 2,225,467 $ 823,623 - ------------------------------------------------------------------------------------------------------------------ Institutional Shares ($Dollars): Net Assets $388,170,906 $ 52,781,932 $ 85,014,525 Total shares outstanding at end of year 388,306,196 52,783,258 85,015,819 Net asset value, offering and redemption price per share (net assets / shares outstanding) $ 1.00 $ 1.00 $ 1.00 Class A Shares ($Dollars): Net Assets $640,366,315 $1,940,602,170 $631,477,612 Total shares outstanding at end of year 640,635,133 1,940,597,943 631,479,986 Net asset value, offering and redemption price per share (net assets / shares outstanding) $ 1.00 $ 1.00 $ 1.00 Class S Shares ($Dollars): Net Assets $324,352,628 $ 232,082,832 $107,130,690 Total shares outstanding at end of year 324,442,719 232,083,278 107,127,093 Net asset value and redemption price per share (net assets / shares outstanding) $ 1.00 $ 1.00 $ 1.00 AMOUNTS DESIGNATED AS "--" ARE EITHER $0 OR HAVE BEEN ROUNDED TO $0. SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 60 statements of operations FOR THE YEAR ENDED SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- Large Cap Value Large Cap Growth RCB Small Cap Technology Equity Fund Equity Fund Value Fund Growth Fund (000) (000) (000) (000) ------------------------------------------------------------------- INVESTMENT INCOME: Dividend $ 2,173 $ 568 $ 572 $ 17 Interest 16 -- 541 -- Less: Foreign tax withheld (2) -- (6) -- - ------------------------------------------------------------------------------------------------------------------------------- Total Investment Income 2,187 568 1,107 17 - ------------------------------------------------------------------------------------------------------------------------------- EXPENSES: Investment Advisory Fees 585 293 669 22 Shareholder Servicing Fees--Institutional Class 205 88 35 3 Shareholder Servicing Fees--Class A(1) 61 49 60 8 Shareholder Servicing Fees--Class R(1) -- -- 264 -- Administrative Fees 52 25 43 1 Trustee Fees 3 2 3 -- Professional Fees 12 3 10 (2) Transfer Agent Fees 10 5 9 -- Custodian Fees 5 2 9 -- Printing Fees 4 1 3 -- Registration Fees 3 1 1 -- Insurance and Other Fees 7 5 9 -- - ------------------------------------------------------------------------------------------------------------------------------- Total Expenses 947 474 1,115 32 - ------------------------------------------------------------------------------------------------------------------------------- Recovery of Investment Advisory Fees Previously Waived(2) -- -- -- 2 Less Waiver of: Transfer Agent Fees (10) (5) (9) -- - ------------------------------------------------------------------------------------------------------------------------------- Net Expenses 937 469 1,106 34 - ------------------------------------------------------------------------------------------------------------------------------- NET INVESTMENT INCOME (LOSS) 1,250 99 1 (17) - ------------------------------------------------------------------------------------------------------------------------------- Net Realized Gain From Securities Transactions 5,205 1,412 1,110 103 Net Change in Unrealized Appreciation (Depreciation) on Investments 6,087 547 (908) 81 - ------------------------------------------------------------------------------------------------------------------------------- NET INCREASE IN NET ASSETS RESULTING FROM OPERATIONS $12,542 $2,058 $ 203 $167 =============================================================================================================================== (1) INCLUDES CLASS SPECIFIC DISTRIBUTION EXPENSES. (2) SEE NOTE 4 FOR ADVISORY FEES RECOVERED. AMOUNTS DESIGNATED AS "--" ARE EITHER $0 OR HAVE BEEN ROUNDED TO $0. SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 61 statements of operations FOR THE YEAR ENDED SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- California Corporate Government Tax Exempt High Yield Bond Fund Bond Fund Bond Fund Bond Fund (000) (000) (000) (000) ---------------------------------------------------------------- INVESTMENT INCOME: Interest $2,584 $1,533 $841 $3,467 Dividend 50 26 13 18 - -------------------------------------------------------------------------------------------------------------------------------- Total Investment Income 2,634 1,559 854 3,485 - -------------------------------------------------------------------------------------------------------------------------------- EXPENSES: Investment Advisory Fees 216 141 69 305 Shareholder Servicing Fees--Institutional Class 131 80 61 53 Shareholder Servicing Fees--Class A(1) 7 4 6 107 Administrative Fees 30 18 14 23 Trustee Fees 2 1 1 2 Professional Fees 5 4 2 4 Transfer Agent Fees 6 4 3 4 Custodian Fees 3 2 1 2 Printing Fees 1 1 1 1 Registration Fees 1 1 1 1 Insurance and Other Fees 6 4 3 5 - -------------------------------------------------------------------------------------------------------------------------------- Total Expenses 408 260 162 507 - -------------------------------------------------------------------------------------------------------------------------------- Recovery of Investment Advisory Fees Previously Waived(2) 5 -- -- -- Less Waiver of: Investment Advisory Fees -- (23) (28) (38) Transfer Agent Fees (6) (4) (3) (4) - -------------------------------------------------------------------------------------------------------------------------------- Net Expenses 407 233 131 465 - -------------------------------------------------------------------------------------------------------------------------------- NET INVESTMENT INCOME 2,227 1,326 723 3,020 - -------------------------------------------------------------------------------------------------------------------------------- Net Realized Loss From Securities Transactions (276) (360) (35) (18) Net Change in Unrealized Appreciation (Depreciation) on Investments (191) 48 122 (392) - -------------------------------------------------------------------------------------------------------------------------------- NET INCREASE IN NET ASSETS RESULTING FROM OPERATIONS $1,760 $1,014 $810 $2,610 ================================================================================================================================== (1) INCLUDES CLASS SPECIFIC DISTRIBUTION EXPENSES. (2) SEE NOTE 4 FOR ADVISORY FEES RECOVERY. AMOUNTS DESIGNATED AS "--" ARE EITHER $0 OR HAVE BEEN ROUNDED TO $0. SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 62 statements of operations FOR THE YEAR ENDED SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- California Prime Government Tax Exempt Money Money Money Market Fund Market Fund Market Fund (000) (000) (000) ---------------------------------------------- INVESTMENT INCOME: Interest $52,333 $104,689 $25,657 Dividend 24 -- -- - --------------------------------------------------------------------------------------------------------------- Total Investment Income 52,357 104,689 25,657 - --------------------------------------------------------------------------------------------------------------- EXPENSES: Investment Advisory Fees 2,761 5,904 2,204 Shareholder Servicing Fees--Institutional Class 893 126 200 Shareholder Servicing Fees--Class A(1) 3,592 14,797 4,808 Shareholder Servicing Fees--Class S(1) 2,009 1,857 713 Administrative Fees 612 1,259 453 Trustee Fees 37 85 30 Professional Fees 127 242 95 Transfer Agent Fees 120 248 89 Custodian Fees 58 108 44 Printing Fees 43 68 30 Registration and Filing Fees 33 50 17 Insurance and Other Fees 102 269 91 - --------------------------------------------------------------------------------------------------------------- Total Expenses 10,387 25,013 8,774 - --------------------------------------------------------------------------------------------------------------- Less Waiver of: Investment Advisory Fees -- -- (516) Shareholder Servicing Fees -- Class A(1) (1,340) (5,524) (1,731) Shareholder Servicing Fees -- Class S(1) (214) (198) (67) Transfer Agent Fees (120) (248) (89) - --------------------------------------------------------------------------------------------------------------- Net Expenses 8,713 19,043 6,371 - --------------------------------------------------------------------------------------------------------------- NET INVESTMENT INCOME 43,644 85,646 19,286 - --------------------------------------------------------------------------------------------------------------- Net Realized Gain From Securities Transactions -- 1 -- - --------------------------------------------------------------------------------------------------------------- NET INCREASE IN NET ASSETS RESULTING FROM OPERATIONS $43,644 $ 85,647 $19,286 =============================================================================================================== (1) INCLUDES CLASS SPECIFIC DISTRIBUTION EXPENSES. AMOUNTS DESIGNATED AS "--" ARE EITHER $0 OR HAVE BEEN ROUNDED TO $0. SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 63 statements of changes in net assets FOR THE YEAR ENDED SEPTEMBER 30, - -------------------------------------------------------------------------------- Large Cap Value Large Cap Growth Equity Fund (000) Equity Fund (000) -------------------- ---------------------- 2006 2005 2006 2005 - ----------------------------------------------------------------------------- ---------------------- OPERATIONS: Net Investment Income (Loss) $ 1,250 $ 536 $ 99 $ 194 Net Realized Gain (Loss) from Security Transactions 5,205 4,127 1,412 376 Net Change in Unrealized Appreciation (Depreciation) on Investments 6,087 1,915 547 2,999 - ----------------------------------------------------------------------------- ---------------------- Net Increase in Net Assets Resulting from Operations 12,542 6,578 2,058 3,569 - ----------------------------------------------------------------------------- ---------------------- DIVIDENDS AND DISTRIBUTIONS FROM: Net Investment Income: INSTITUTIONAL CLASS (1,124) (453) (96) (172) CLASS A (128) (82) (5) (26) CLASS R -- -- -- -- Realized Capital Gains: INSTITUTIONAL CLASS (3,330) (1,585) -- -- CLASS A (459) (323) -- -- CLASS R -- -- -- -- - ----------------------------------------------------------------------------- ---------------------- Total Dividends and Distributions (5,041) (2,443) (101) (198) - ----------------------------------------------------------------------------- ---------------------- CAPITAL SHARE TRANSACTIONS:(1) INSTITUTIONAL CLASS: Shares Issued 55,314 8,083 7,916 10,719 Shares Issued in Lieu of Dividends and Distributions 2,902 673 30 56 Shares Redeemed (14,689) (7,549) (7,829) (4,944) - ----------------------------------------------------------------------------- ---------------------- Increase (Decrease) in Net Assets from Institutional Class Share Transactions 43,527 1,207 117 5,831 - ----------------------------------------------------------------------------- ---------------------- CLASS A: Shares Issued 2,656 4,714 3,182 3,209 Shares Issued in Lieu of Dividends and Distributions 471 323 4 18 Shares Redeemed (1,743) (1,366) (1,497) (785) - ----------------------------------------------------------------------------- ---------------------- Increase (Decrease) in Net Assets from Class A Share Transactions 1,384 3,671 1,689 2,442 - ----------------------------------------------------------------------------- ---------------------- CLASS R: Shares Issued -- -- -- -- Shares Issued in Lieu of Dividends and Distributions -- -- -- -- Shares Redeemed -- -- -- -- - ----------------------------------------------------------------------------- ---------------------- Increase (Decrease) in Net Assets from Class R Share Transactions -- -- -- -- - ----------------------------------------------------------------------------- ---------------------- Net Increase (Decrease) in Net Assets from Share Transactions 44,911 4,878 1,806 8,273 - ----------------------------------------------------------------------------- ---------------------- Total Increase (Decrease) in Net Assets 52,412 9,013 3,763 11,644 - ----------------------------------------------------------------------------- ---------------------- NET ASSETS: Beginning of year 53,638 44,625 42,442 30,798 - ----------------------------------------------------------------------------- ---------------------- End of year $106,050 $ 53,638 $ 46,205 $ 42,442 ============================================================================= ====================== Undistributed (Distributions in Excess of) Net Investment Income $ (2) $ -- $ (1) $ (1) - ----------------------------------------------------------------------------- ---------------------- (1) SEE NOTE 8 FOR SHARES ISSUED AND REDEEMED. AMOUNTS DESIGNATED AS "--" ARE EITHER $0 OR HAVE BEEN ROUNDED TO $0. SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 64 RCB Small Cap Technology Growth Corporate Bond Value Fund (000) Fund (000) Fund (000) -------------------- -------------------- -------------------- 2006 2005 2006 2005 2006 2005 - ----------------------------------------------------------------------------- -------------------- -------------------- OPERATIONS: Net Investment Income (Loss) $ 1 $ 44 $ (17) $ 4 $ 2,227 $ 1,920 Net Realized Gain (Loss) from Security Transactions 1,110 2,115 103 40 (276) (65) Net Change in Unrealized Appreciation (Depreciation) on Investments (908) 3,809 81 320 (191) (1,281) - ----------------------------------------------------------------------------- -------------------- -------------------- Net Increase in Net Assets Resulting from Operations 203 5,968 167 364 1,760 574 - ----------------------------------------------------------------------------- -------------------- -------------------- DIVIDENDS AND DISTRIBUTIONS FROM: Net Investment Income: INSTITUTIONAL CLASS (35) -- (4) -- (2,167) (1,865) CLASS A (1) -- -- -- (54) (54) CLASS R (10) -- -- -- -- -- Realized Capital Gains: INSTITUTIONAL CLASS (186) (462) -- -- -- (293) CLASS A (170) (480) -- -- -- (10) CLASS R (785) (2,072) -- -- -- -- - ----------------------------------------------------------------------------- -------------------- -------------------- Total Dividends and Distributions (1,187) (3,014) (4) -- (2,221) (2,222) - ----------------------------------------------------------------------------- -------------------- -------------------- CAPITAL SHARE TRANSACTIONS:(1) INSTITUTIONAL CLASS: Shares Issued 5,422 7,853 333 428 15,662 15,341 Shares Issued in Lieu of Dividends and Distributions 159 325 4 -- 406 396 Shares Redeemed (5,973) (3,616) (357) (379) (11,526) (10,031) - ----------------------------------------------------------------------------- -------------------- -------------------- Increase (Decrease) in Net Assets from Institutional Class Share Transactions (392) 4,562 (20) 49 4,542 5,706 - ----------------------------------------------------------------------------- -------------------- -------------------- CLASS A: Shares Issued 1,155 7,216 144 37 146 604 Shares Issued in Lieu of Dividends and Distributions 129 391 -- -- 25 30 Shares Redeemed (3,396) (2,825) (215) (56) (353) (571) - ----------------------------------------------------------------------------- -------------------- -------------------- Increase (Decrease) in Net Assets from Class A Share Transactions (2,112) 4,782 (71) (19) (182) 63 - ----------------------------------------------------------------------------- -------------------- -------------------- CLASS R: Shares Issued 12,077 28,095 -- -- -- -- Shares Issued in Lieu of Dividends and Distributions 742 1,991 -- -- -- -- Shares Redeemed (24,106) (10,847) -- -- -- -- - ----------------------------------------------------------------------------- -------------------- -------------------- Increase (Decrease) in Net Assets from Class R Share Transactions (11,287) 19,239 -- -- -- -- - ----------------------------------------------------------------------------- -------------------- -------------------- Net Increase (Decrease) in Net Assets from Share Transactions (13,791) 28,583 (91) 30 4,360 5,769 - ----------------------------------------------------------------------------- -------------------- -------------------- Total Increase (Decrease) in Net Assets (14,775) 31,537 72 394 3,899 4,121 - ----------------------------------------------------------------------------- -------------------- -------------------- NET ASSETS: Beginning of year 84,516 52,979 2,610 2,216 52,723 48,602 - ----------------------------------------------------------------------------- -------------------- -------------------- End of year $ 69,741 $ 84,516 $ 2,682 $ 2,610 $ 56,622 $ 52,723 ============================================================================= ==================== ==================== Undistributed (Distributions in Excess of) Net Investment Income $ 3 $ 43 $ -- $ 4 $ 1 $ -- - ----------------------------------------------------------------------------- -------------------- -------------------- SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 65 statements of changes in net assets FOR THE YEAR ENDED SEPTEMBER 30, - -------------------------------------------------------------------------------- Government California Tax Exempt Bond Fund (000) Bond Fund (000) ------------------------ ------------------------ 2006 2005 2006 2005 - --------------------------------------------------------------------------------- ------------------------ OPERATIONS: Net Investment Income $ 1,326 $ 738 $ 723 $ 593 Net Realized Gain (Loss) from Security Transactions (360) (55) (35) 135 Net Change in Unrealized Appreciation (Depreciation) on Investments 48 (342) 122 (391) - --------------------------------------------------------------------------------- ------------------------ Net Increase in Net Assets Resulting from Operations 1,014 341 810 337 - --------------------------------------------------------------------------------- ------------------------ DIVIDENDS AND DISTRIBUTIONS FROM: Net Investment Income: INSTITUTIONAL CLASS (1,292) (728) (692) (540) CLASS A (32) (11) (31) (53) CLASS S -- -- -- -- Realized Capital Gains: INSTITUTIONAL CLASS -- (118) (90) (71) CLASS A -- (2) (5) (11) CLASS S -- -- -- -- - --------------------------------------------------------------------------------- ------------------------ Total Dividends and Distributions (1,324) (859) (818) (675) - --------------------------------------------------------------------------------- ------------------------ CAPITAL SHARE TRANSACTIONS:(1) INSTITUTIONAL CLASS: Shares Issued 13,593 12,985 8,793 8,952 Shares Issued in Lieu of Dividends and Distributions 338 209 255 139 Shares Redeemed (6,079) (5,454) (5,739) (3,813) - --------------------------------------------------------------------------------- ------------------------ Increase (Decrease) in Net Assets from Institutional Class Share Transactions 7,852 7,740 3,309 5,278 - --------------------------------------------------------------------------------- ------------------------ CLASS A: Shares Issued 1,378 275 31 302 Shares Issued in Lieu of Dividends and Distributions 9 5 6 25 Shares Redeemed (162) (153) (385) (1,240) - --------------------------------------------------------------------------------- ------------------------ Increase (Decrease) in Net Assets from Class A Share Transactions 1,225 127 (348) (913) - --------------------------------------------------------------------------------- ------------------------ CLASS S: Shares Issued -- -- -- -- Shares Issued in Lieu of Dividends and Distributions -- -- -- -- Shares Redeemed -- -- -- -- - --------------------------------------------------------------------------------- ------------------------ Increase (Decrease) in Net Assets from Class S Share Transactions -- -- -- -- - --------------------------------------------------------------------------------- ------------------------ Net Increase (Decrease) in Net Assets from Share Transactions 9,077 7,867 2,961 4,365 - --------------------------------------------------------------------------------- ------------------------ Total Increase (Decrease) in Net Assets 8,767 7,349 2,953 4,027 - --------------------------------------------------------------------------------- ------------------------ NET ASSETS: Beginning of year 28,686 21,337 24,255 20,228 - --------------------------------------------------------------------------------- ------------------------ End of year $ 37,453 $ 28,686 $ 27,208 $ 24,255 ================================================================================= ======================== Undistributed (Distributions in excess of) Net Investment Income $ 1 $ 3 $ -- $ -- - --------------------------------------------------------------------------------- ------------------------ (1) SEE NOTE 8 FOR SHARES ISSUED AND REDEEMED. AMOUNTS DESIGNATED AS "--" ARE EITHER $0 OR HAVE BEEN ROUNDED TO $0. SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 66 High Yield Prime Money Bond Fund (000) Market Fund (000) ------------------------ ------------------------ 2006 2005 2006 2005 - --------------------------------------------------------------------------------- ------------------------ OPERATIONS: Net Investment Income $ 3,020 $ 3,416 $ 43,644 $ 14,619 Net Realized Gain (Loss) from Security Transactions (18) (157) -- 1 Net Change in Unrealized Appreciation (Depreciation) on Investments (392) (1,200) -- -- - --------------------------------------------------------------------------------- ------------------------ Net Increase in Net Assets Resulting from Operations 2,610 2,059 43,644 14,620 - --------------------------------------------------------------------------------- ------------------------ DIVIDENDS AND DISTRIBUTIONS FROM: Net Investment Income: INSTITUTIONAL CLASS (1,599) (1,815) (14,704) (7,317) CLASS A (1,421) (1,589) (18,919) (4,601) CLASS S -- -- (10,020) (2,701) Realized Capital Gains: INSTITUTIONAL CLASS -- -- -- -- CLASS A -- -- -- -- CLASS S -- -- -- -- - --------------------------------------------------------------------------------- ------------------------ Total Dividends and Distributions (3,020) (3,404) (43,643) (14,619) - --------------------------------------------------------------------------------- ------------------------ CAPITAL SHARE TRANSACTIONS:(1) INSTITUTIONAL CLASS: Shares Issued 4,120 6,056 1,690,942 1,215,600 Shares Issued in Lieu of Dividends and Distributions 895 945 2,507 1,411 Shares Redeemed (6,503) (6,600) (1,637,671) (1,251,828) - --------------------------------------------------------------------------------- ------------------------ Increase (Decrease) in Net Assets from Institutional Class Share Transactions (1,488) 401 55,778 (34,817) - --------------------------------------------------------------------------------- ------------------------ CLASS A: Shares Issued 1,822 4,528 2,204,941 958,549 Shares Issued in Lieu of Dividends and Distributions 817 920 5,522 982 Shares Redeemed (3,425) (4,403) (1,882,549) (848,138) - --------------------------------------------------------------------------------- ------------------------ Increase (Decrease) in Net Assets from Class A Share Transactions (786) 1,045 327,914 111,393 - --------------------------------------------------------------------------------- ------------------------ CLASS S: Shares Issued -- -- 1,261,525 499,380 Shares Issued in Lieu of Dividends and Distributions -- -- -- -- Shares Redeemed -- -- (1,140,675) (411,638) - --------------------------------------------------------------------------------- ------------------------ Increase (Decrease) in Net Assets from Class S Share Transactions -- -- 120,850 87,742 - --------------------------------------------------------------------------------- ------------------------ Net Increase (Decrease) in Net Assets from Share Transactions (2,274) 1,446 504,542 164,318 - --------------------------------------------------------------------------------- ------------------------ Total Increase (Decrease) in Net Assets (2,684) 101 504,543 164,319 - --------------------------------------------------------------------------------- ------------------------ NET ASSETS: Beginning of year 43,616 43,515 848,347 684,028 - --------------------------------------------------------------------------------- ------------------------ End of year $ 40,932 $ 43,616 $1,352,890 $ 848,347 ================================================================================= ======================== Undistributed (Distributions in excess of) Net Investment Income $ -- $ -- $ 1 $ -- - --------------------------------------------------------------------------------- ------------------------ Government Money California Tax Exempt Market Fund (000) Money Market Fund (000) ------------------------ ------------------------ 2006 2005 2006 2005 - --------------------------------------------------------------------------------- ------------------------ OPERATIONS: Net Investment Income $ 85,646 $ 38,831 $ 19,286 $ 9,079 Net Realized Gain (Loss) from Security Transactions 1 -- -- -- Net Change in Unrealized Appreciation (Depreciation) on Investments -- -- -- -- - --------------------------------------------------------------------------------- ------------------------ Net Increase in Net Assets Resulting from Operations 85,647 38,831 19,286 9,079 - --------------------------------------------------------------------------------- ------------------------ DIVIDENDS AND DISTRIBUTIONS FROM: Net Investment Income: INSTITUTIONAL CLASS (2,064) (880) (2,080) (1,365) CLASS A (74,663) (33,943) (15,136) (7,285) CLASS S (8,922) (4,006) (2,065) (433) Realized Capital Gains: INSTITUTIONAL CLASS -- -- -- (27) CLASS A -- -- -- (144) CLASS S -- -- -- (7) - --------------------------------------------------------------------------------- ------------------------ Total Dividends and Distributions (85,649) (38,829) (19,281) (9,261) - --------------------------------------------------------------------------------- ------------------------ CAPITAL SHARE TRANSACTIONS:(1) INSTITUTIONAL CLASS: Shares Issued 635,895 376,258 1,444,514 1,139,802 Shares Issued in Lieu of Dividends and Distributions 2 7 -- 8 Shares Redeemed (615,154) (387,834) (1,432,711) (1,145,985) - --------------------------------------------------------------------------------- ------------------------ Increase (Decrease) in Net Assets from Institutional Class Share Transactions 20,743 (11,569) 11,803 (6,175) - --------------------------------------------------------------------------------- ------------------------ CLASS A: Shares Issued 5,761,555 4,965,371 2,014,013 1,822,478 Shares Issued in Lieu of Dividends and Distributions 51,511 23,227 12,188 6,066 Shares Redeemed (5,767,874) (4,950,864) (1,964,398) (1,763,753) - --------------------------------------------------------------------------------- ------------------------ Increase (Decrease) in Net Assets from Class A Share Transactions 45,192 37,734 61,803 64,791 - --------------------------------------------------------------------------------- ------------------------ CLASS S: Shares Issued 1,013,412 689,747 348,788 271,376 Shares Issued in Lieu of Dividends and Distributions -- -- -- -- Shares Redeemed (1,009,234) (724,928) (329,840) (216,708) - --------------------------------------------------------------------------------- ------------------------ Increase (Decrease) in Net Assets from Class S Share Transactions 4,178 (35,181) 18,948 54,668 - --------------------------------------------------------------------------------- ------------------------ Net Increase (Decrease) in Net Assets from Share Transactions 70,113 (9,016) 92,554 113,284 - --------------------------------------------------------------------------------- ------------------------ Total Increase (Decrease) in Net Assets 70,111 (9,014) 92,559 113,102 - --------------------------------------------------------------------------------- ------------------------ NET ASSETS: Beginning of year 2,155,356 2,164,370 731,064 617,962 - --------------------------------------------------------------------------------- ------------------------ End of year $2,225,467 $2,155,356 $ 823,623 $ 731,064 ================================================================================= ======================== Undistributed (Distributions in excess of) Net Investment Income $ 2 $ 5 $ -- $ (5) - --------------------------------------------------------------------------------- ------------------------ SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 67 financial highlights FOR A SHARE OUTSTANDING THROUGHOUT EACH PERIOD FOR THE YEAR ENDED SEPTEMBER 30, - -------------------------------------------------------------------------------- NET NET REALIZED AND DISTRIBUTIONS NET NET ASSET NET UNREALIZED DIVIDENDS FROM ASSET ASSETS VALUE INVESTMENT GAINS (LOSSES) FROM NET REALIZED VALUE END BEGINNING INCOME ON INVESTMENT CAPITAL END TOTAL OF PERIOD OF PERIOD (LOSS) SECURITIES INCOME GAINS OF PERIOD RETURN++ (000) - -------------------------------------------------------------------------------------------------------------------------- LARGE CAP VALUE EQUITY FUND Institutional Class (commenced operations on January 14, 2000) 2006 $ 9.54 $ 0.13^ $ 1.21^ $ (0.13) $ (0.39) $ 10.36 14.50% $ 92,946 2005 8.77 0.10^ 1.13^ (0.10) (0.36) 9.54 14.39 42,974 2004 7.41 0.08^ 1.36^ (0.08) -- 8.77 19.40 38,344 2003 6.04 0.07 1.37 (0.07) -- 7.41 24.03 33,016 2002 7.63 0.07 (1.47) (0.07) (0.12) 6.04 (18.88) 23,325 Class A (commenced operations on April 13, 2000) 2006 $ 9.53 $ 0.11^ $ 1.20^ $ (0.10) $ (0.39) $ 10.35 14.24% $ 13,104 2005 8.76 0.09^ 1.12^ (0.08) (0.36) 9.53 14.14 10,664 2004 7.41 0.05^ 1.36^ (0.06) -- 8.76 19.01 6,281 2003 6.04 0.06 1.37 (0.06) -- 7.41 23.75 1,792 2002 7.62 0.05 (1.46) (0.05) (0.12) 6.04 (18.97) 769 - -------------------------------------------------------------------------------------------------------------------------- LARGE CAP GROWTH EQUITY FUND Institutional Class (commenced operations on January 14, 2000) 2006 $ 7.43 $ 0.02^ $ 0.32^ $ (0.02) $ -- $ 7.75 4.59% $ 35,842 2005 6.76 0.04^ 0.67^ (0.04) -- 7.43 10.55 34,164 2004 6.37 0.01^ 0.38^ --^^ -- 6.76 6.20 25,575 2003 5.25 0.01^ 1.12^ (0.01) -- 6.37 21.51 22,249 2002 6.36 0.00 (1.11) -- -- 5.25 (17.45) 14,195 Class A (commenced operations on March 28, 2000) 2006 $ 7.35 $ --^ $ 0.33^ $ --^^ $ -- $ 7.68 4.55% $ 10,363 2005 6.69 0.02^ 0.67^ (0.03) -- 7.35 10.28 8,278 2004 6.32 (0.01)^ 0.38^ --^^ -- 6.69 5.87 5,223 2003 5.21 (0.01)^ 1.12^ -- -- 6.32 21.31 1,965 2002 6.33 (0.02) (1.10) -- -- 5.21 (17.69) 798 - -------------------------------------------------------------------------------------------------------------------------- RCB SMALL CAP VALUE FUND Institutional Class (commenced operations on October 3, 2001) 2006 $28.58 $ 0.06^ $ 0.05^ $ (0.07) $ (0.37) $ 28.25 0.40% $ 13,435 2005 27.30 0.07^ 2.58^ -- (1.37) 28.58 9.87 13,975 2004 21.92 0.06^ 5.40^ -- (0.08) 27.30 24.97 8,955 2003 15.06 (0.04)^ 6.90^ -- -- 21.92 45.55 6,236 2002 17.11 (0.07) (1.98) -- -- 15.06 (11.98) 1,768 Class A (commenced operations on October 3, 2001) 2006 $28.31 $ (0.01)^ $ 0.05^ $ --^^ $ (0.37) $ 27.98 0.17% $ 10,470 2005 27.13 0.00^ 2.55^ -- (1.37) 28.31 9.55 12,754 2004 21.84 (0.02)^ 5.39^ -- (0.08) 27.13 24.64 7,551 2003 15.04 (0.08)^ 6.88^ -- -- 21.84 45.21 2,384 2002 17.11 (0.05) (2.02) -- -- 15.04 (12.10) 410 Class R (commenced operations on September 30, 1998) (2) 2006 $28.27 $ (0.01)^ $ 0.04^ $ --^^ $ (0.37) $ 27.93 0.14% $ 45,836 2005 27.09 0.01^ 2.54^ -- (1.37) 28.27 9.56 57,787 2004 21.81 (0.02)^ 5.38^ -- (0.08) 27.09 24.63 36,473 2003 15.02 (0.07)^ 6.86^ -- -- 21.81 45.21 14,267 2002 16.94 (0.12) (1.80) -- -- 15.02 (11.33) 10,174 - -------------------------------------------------------------------------------------------------------------------------- TECHNOLOGY GROWTH FUND Institutional Class (commenced operations on October 3, 2000) 2006 $ 4.04 $ (0.02)^ $ 0.29^ $ (0.01) $ -- $ 4.30 6.77% $ 1,245 2005 3.46 0.01^ 0.57^ -- -- 4.04 16.76 1,187 2004 3.50 (0.03)^ (0.01)^ -- -- 3.46 (1.14) 976 2003 2.26 (0.02) 1.26 -- -- 3.50 54.87 913 2002 3.54 (0.03) (1.25) -- -- 2.26 (36.16) 565 Class A (commenced operations on October 23, 2000) 2006 $ 3.98 $ (0.03)^ $ 0.28^ $ --^^ $ -- $ 4.23 6.30% $ 1,437 2005 3.42 0.00^ 0.56^ -- -- 3.98 16.37 1,423 2004 3.48 (0.04)^ (0.02)^ -- -- 3.42 (1.72) 1,240 2003 2.25 (0.03) 1.26 -- -- 3.48 54.67 950 2002 3.54 (0.04) (1.25) -- -- 2.25 (36.44) 432 RATIO OF EXPENSES RATIO TO AVERAGE OF NET NET ASSETS RATIO INVESTMENT (EXCLUDING OF EXPENSES INCOME (LOSS) WAIVERS & PORTFOLIO TO AVERAGE TO AVERAGE RECOVERED TURNOVER NET ASSETS(1)# NET ASSETS(1) FEES)(1) RATE - ------------------------------------------------------------------------ LARGE CAP VALUE EQUITY FUND Institutional Class (commenced operations on January 14, 2000) 2006 0.96% 1.36% 0.97% 31% 2005 0.96 1.12 0.97 34 2004 0.97 0.92 0.97 36 2003 1.00 1.12 1.00 39 2002 1.00 0.90 1.05 42 Class A (commenced operations on April 13, 2000) 2006 1.21% 1.13% 1.22% 31% 2005 1.21 0.87 1.22 34 2004 1.22 0.64 1.22 36 2003 1.25 0.84 1.25 39 2002 1.25 0.65 1.30 42 - ------------------------------------------------------------------------ LARGE CAP GROWTH EQUITY FUND Institutional Class (commenced operations on January 14, 2000) 2006 0.99% 0.27% 1.00% 34% 2005 0.98 0.57 1.00 27 2004 1.01 0.10 1.01 50 2003 1.05 0.16 1.03 43 2002 1.05 (0.04) 1.09 31 Class A (commenced operations on March 28, 2000) 2006 1.24% 0.03% 1.25% 34% 2005 1.23 0.33 1.25 27 2004 1.26 (0.14) 1.26 50 2003 1.30 (0.09) 1.29 43 2002 1.30 (0.29) 1.34 31 - ------------------------------------------------------------------------ RCB SMALL CAP VALUE FUND Institutional Class (commenced operations on October 3, 2001) 2006 1.20% 0.20% 1.21% 66% 2005 1.18 0.26 1.20 41 2004 1.21 0.23 1.20 40 2003 1.24 (0.20) 1.24 65 2002 1.24 (0.46) 1.28 39 Class A (commenced operations on October 3, 2001) 2006 1.45% (0.04)% 1.46% 66% 2005 1.43 0.01 1.45 41 2004 1.49 (0.07) 1.48 40 2003 1.49 (0.45) 1.49 65 2002 1.49 (0.74) 1.53 39 Class R (commenced operations on September 30, 1998) (2) 2006 1.45% (0.04)% 1.46% 66% 2005 1.43 0.02 1.45 41 2004 1.49 (0.07) 1.48 40 2003 1.49 (0.41) 1.49 65 2002 1.49 (0.70) 1.53 39 - ------------------------------------------------------------------------ TECHNOLOGY GROWTH FUND Institutional Class (commenced operations on October 3, 2000) 2006 1.16% (0.52)% 1.10% 24% 2005 1.20 0.34 1.21 37 2004 1.20 (0.82) 1.28 33 2003 1.20 (0.78) 1.36 29 2002 1.20 (0.88) 1.37 24 Class A (commenced operations on October 23, 2000) 2006 1.46% (0.81)% 1.40% 24% 2005 1.50 0.06 1.51 37 2004 1.50 (1.12) 1.58 33 2003 1.50 (1.08) 1.66 29 2002 1.50 (1.18) 1.67 24 ++ RETURNS ARE FOR THE PERIOD INDICATED AND HAVE NOT BEEN ANNUALIZED. FEE WAIVERS ARE IN EFFECT; IF THEY HAD NOT BEEN IN EFFECT, PERFORMANCE WOULD HAVE BEEN LOWER. TOTAL RETURN FIGURES DO NOT INCLUDE APPLICABLE SALES LOADS. RETURNS SHOWN DO NOT REFLECT THE DEDUCTION OF TAXES THAT A SHAREHOLDER WOULD PAY ON FUND DISTRIBUTIONS OR THE REDEMPTION OF FUND SHARES. ^ PER SHARE CALCULATIONS ARE BASED ON AVERAGE SHARES OUTSTANDING THROUGHOUT THE PERIOD. ^^ AMOUNT REPRESENTS LESS THAN $0.01 PER SHARE. # RATIO INCLUDES WAIVERS AND PREVIOUSLY WAIVED INVESTMENT ADVISORY FEES RECOVERED. THE IMPACT OF THE RECOVERED FEES MAY CAUSE A HIGHER NET EXPENSE RATIO. (1) ANNUALIZED FOR PERIODS LESS THAN ONE YEAR. (2) ON OCTOBER 3, 2001, THE RCB SMALL CAP FUND EXCHANGED ALL OF ITS ASSETS AND LIABILITIES FOR SHARES OF THE CNI CHARTER RCB SMALL CAP VALUE FUND. THE CNI CHARTER RCB SMALL CAP VALUE FUND IS THE ACCOUNTING SURVIVOR IN THIS TRANSACTION, AND AS A RESULT, ITS BASIS OF ACCOUNTING FOR ASSETS AND LIABILITIES AND ITS OPERATING RESULTS FOR THE PERIODS PRIOR TO OCTOBER 3, 2001 HAVE BEEN CARRIED FORWARD IN THESE FINANCIAL HIGHLIGHTS. AMOUNTS DESIGNATED AS "--" ARE EITHER $0 OR HAVE BEEN ROUNDED TO $0. SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 68 - -------------------------------------------------------------------------------- NET NET REALIZED AND DISTRIBUTIONS NET NET ASSET UNREALIZED DIVIDENDS FROM ASSET ASSETS VALUE NET GAINS (LOSSES) FROM NET REALIZED VALUE END BEGINNING INVESTMENT ON INVESTMENT CAPITAL END TOTAL OF PERIOD OF PERIOD INCOME SECURITIES INCOME GAINS OF PERIOD RETURN++ (000) - -------------------------------------------------------------------------------------------------------------------------- CORPORATE BOND FUND Institutional Class (commenced operations on January 14, 2000) 2006 $10.27 $ 0.42^ $ (0.10)^ $ (0.42) $ -- $ 10.17 3.19% $ 55,290 2005 10.60 0.40^ (0.27)^ (0.40) (0.06) 10.27 1.26 51,193 2004 10.89 0.41^ (0.18)^ (0.41) (0.11) 10.60 2.15 47,080 2003 10.65 0.46 0.24 (0.46) -- 10.89 6.74 42,256 2002 10.72 0.53 0.09 (0.53) (0.16) 10.65 6.06 40,807 Class A (commenced operations on April 13, 2000) 2006 $10.27 $ 0.39^ $ (0.10)^ $ (0.39) $ -- $ 10.17 2.93% $ 1,332 2005 10.61 0.37^ (0.28)^ (0.37) (0.06) 10.27 0.91 1,530 2004 10.89 0.37^ (0.16)^ (0.38) (0.11) 10.61 1.99 1,522 2003 10.65 0.44 0.23 (0.43) -- 10.89 6.47 830 2002 10.73 0.50 0.08 (0.50) (0.16) 10.65 5.69 544 - -------------------------------------------------------------------------------------------------------------------------- GOVERNMENT BOND FUND Institutional Class (commenced operations on January 14, 2000) 2006 $10.40 $ 0.41^ $ (0.12)^ $ (0.41) $ -- $ 10.28 2.89% $ 35,671 2005 10.62 0.31^ (0.16)^ (0.31) (0.06) 10.40 1.42 28,132 2004 10.93 0.25^ (0.17)^ (0.25) (0.14) 10.62 0.81 20,901 2003 11.02 0.36^ (0.07)^ (0.37) (0.01) 10.93 2.68* 15,596 2002 10.80 0.44 0.34 (0.44) (0.12) 11.02 7.53 14,502 Class A (commenced operations on April 13, 2000) 2006 $10.42 $ 0.39^ $ (0.12)^ $ (0.39) $ -- $ 10.30 2.63% $ 1,782 2005 10.64 0.29^ (0.17)^ (0.28) (0.06) 10.42 1.16 554 2004 10.95 0.23^ (0.17)^ (0.23) (0.14) 10.64 0.55 436 2003 11.01 0.33^ (0.04)^ (0.34) (0.01) 10.95 2.71* 18 2002 10.77 0.43 0.34 (0.41) (0.12) 11.01 7.47 525 - -------------------------------------------------------------------------------------------------------------------------- CALIFORNIA TAX EXEMPT BOND FUND Institutional Class (commenced operations on January 14, 2000) 2006 $10.26 $ 0.29^ $ 0.03^ $ (0.29) $ (0.04) $ 10.25 3.18% $ 26,074 2005 10.41 0.28^ (0.11)^ (0.28) (0.04) 10.26 1.65 22,768 2004 10.60 0.27^ (0.06)^ (0.27) (0.13) 10.41 2.00 17,789 2003 10.83 0.31 (0.04) (0.31) (0.19) 10.60 2.63 14,546 2002 10.50 0.36 0.41 (0.35) (0.09) 10.83 7.58 16,147 Class A (commenced operations on April 13, 2000) 2006 $10.29 $ 0.26^ $ 0.02^ $ (0.26) $ (0.04) $ 10.27 2.81% $ 1,134 2005 10.44 0.25^ (0.11)^ (0.25) (0.04) 10.29 1.39 1,487 2004 10.62 0.24^ (0.05)^ (0.24) (0.13) 10.44 1.84 2,439 2003 10.85 0.27 (0.02) (0.29) (0.19) 10.62 2.37 732 2002 10.51 0.33 0.43 (0.33) (0.09) 10.85 7.40 13 - -------------------------------------------------------------------------------------------------------------------------- HIGH YIELD BOND FUND Institutional Class (commenced operations on January 14, 2000) 2006 $ 9.04 $ 0.68^ $ (0.08)^ $ (0.68) $ -- $ 8.96 6.90% $ 20,887 2005 9.31 0.71^ (0.27)^ (0.71) -- 9.04 4.85 22,588 2004 8.95 0.72^ 0.36^ (0.72) -- 9.31 12.47 22,860 2003 8.16 0.76 0.79 (0.76) -- 8.95 19.75 13,387 2002 8.57 0.83 (0.40) (0.84) -- 8.16 4.80 10,020 Class A (commenced operations on January 14, 2000) 2006 $ 9.04 $ 0.65^ $ (0.08)^ $ (0.65) $ -- $ 8.96 6.58% $ 20,045 2005 9.31 0.69^ (0.27)^ (0.69) -- 9.04 4.54 21,028 2004 8.95 0.70^ 0.35^ (0.69) -- 9.31 12.14 20,655 2003 8.16 0.74 0.78 (0.73) -- 8.95 19.39 16,878 2002 8.57 0.81 (0.40) (0.82) -- 8.16 4.49 9,397 RATIO OF EXPENSES RATIO TO AVERAGE OF NET NET ASSETS RATIO INVESTMENT (EXCLUDING OF EXPENSES INCOME WAIVERS & PORTFOLIO TO AVERAGE TO AVERAGE RECOVERED TURNOVER NET ASSETS(1)# NET ASSETS(1) FEES)(1) RATE - --------------------------------------------------------------------- CORPORATE BOND FUND Institutional Class (commenced operations on January 14, 2000) 2006 0.75% 4.14% 0.75% 25% 2005 0.75 3.80 0.76 25 2004 0.75 3.82 0.79 57 2003 0.75 4.30 0.78 66 2002 0.75 5.04 0.82 55 Class A (commenced operations on April 13, 2000) 2006 1.00% 3.88% 1.00% 25% 2005 1.00 3.55 1.01 25 2004 1.00 3.51 1.04 57 2003 1.00 4.00 1.03 66 2002 1.00 4.71 1.07 55 - --------------------------------------------------------------------- GOVERNMENT BOND FUND Institutional Class (commenced operations on January 14, 2000) 2006 0.70% 4.04% 0.78% 62% 2005 0.70 2.98 0.79 58 2004 0.70 2.39 0.81 169 2003 0.70 3.26 0.81 54 2002 0.70 4.11+ 0.86 70 Class A (commenced operations on April 13, 2000) 2006 0.95% 3.81% 1.03% 62% 2005 0.95 2.70 1.04 58 2004 0.95 2.14 1.06 169 2003 0.95 3.00 1.06 54 2002 0.95 3.70 1.11 70 - --------------------------------------------------------------------- CALIFORNIA TAX EXEMPT BOND FUND Institutional Class (commenced operations on January 14, 2000) 2006 0.50% 2.85% 0.62% 43% 2005 0.50 2.70 0.63 54 2004 0.50 2.55 0.65 51 2003 0.50 2.91 0.65 68 2002 0.50 3.33 0.70 90 Class A (commenced operations on April 13, 2000) 2006 0.75% 2.59% 0.87% 43% 2005 0.75 2.43 0.88 54 2004 0.75 2.29 0.90 51 2003 0.75 2.62 0.90 68 2002 0.75 3.05 0.95 90 - --------------------------------------------------------------------- HIGH YIELD BOND FUND Institutional Class (commenced operations on January 14, 2000) 2006 1.00% 7.58% 1.10% 23% 2005 1.00 7.71 1.11 46 2004 1.00 7.87 1.14 35 2003 1.00 8.84 1.13 36 2002 1.00 9.48 1.18 30 Class A (commenced operations on January 14, 2000) 2006 1.30% 7.28% 1.40% 23% 2005 1.30 7.41 1.41 46 2004 1.30 7.56 1.44 35 2003 1.30 8.44 1.43 36 2002 1.30 9.03 1.48 30 * TOTAL RETURN FOR CLASS A OF THE GOVERNMENT BOND FUND IS GREATER THAN THE INSTITUTIONAL CLASS'S DUE TO A LARGE REDEMPTION DURING THE YEAR. + RATIOS REFLECT THE IMPACT OF SIGNIFICANT CHANGES IN AVERAGE NET ASSETS AND THE EFFECTS OF ANNUALIZATION. ++ RETURNS ARE FOR THE PERIOD INDICATED AND HAVE NOT BEEN ANNUALIZED. FEE WAIVERS ARE IN EFFECT; IF THEY HAD NOT BEEN IN EFFECT, PERFORMANCE WOULD HAVE BEEN LOWER. RETURNS SHOWN DO NOT REFLECT THE DEDUCTION OF TAXES THAT A SHAREHOLDER WOULD PAY ON FUND DISTRIBUTIONS OR THE REDEMPTION OF FUND SHARES. ^ PER SHARE CALCULATIONS ARE BASED ON THE AVERAGE SHARES OUTSTANDING THROUGHOUT THE PERIOD. # RATIO INCLUDES WAIVERS AND PREVIOUSLY WAIVED INVESTMENT ADVISORY FEES RECOVERED. THE IMPACT OF THE RECOVERED FEES MAY CAUSE A HIGHER NET EXPENSE RATIO. (1) ANNUALIZED FOR PERIODS LESS THAN ONE YEAR. AMOUNTS DESIGNATED AS "--" ARE EITHER $0 OR HAVE BEEN ROUNDED TO $0. SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 69 financial highlights FOR A SHARE OUTSTANDING THROUGHOUT EACH PERIOD FOR THE YEAR ENDED SEPTEMBER 30, - -------------------------------------------------------------------------------- RATIO OF EXPENSES RATIO TO AVERAGE NET NET NET OF NET NET ASSETS ASSET DIVIDENDS ASSET ASSETS RATIO INVESTMENT (EXCLUDING VALUE NET FROM NET VALUE END OF EXPENSES INCOME WAIVERS & BEGINNING INVESTMENT INVESTMENT END TOTAL OF PERIOD TO AVERAGE TO AVERAGE RECOVERED OF PERIOD INCOME INCOME OF PERIOD RETURN++ (000) NET ASSETS(1)# NET ASSETS(1) FEES)(1) - ------------------------------------------------------------------------------------------------------------------------------------ PRIME MONEY MARKET FUND Institutional Class (commenced operations on March 23, 1998) 2006 $ 1.00 $ 0.041 $(0.041) $ 1.00 4.17% $ 388,171 0.59% 4.12% 0.60% 2005 1.00 0.021 (0.021) 1.00 2.10 332,393 0.60 2.05 0.61 2004 1.00 0.006 (0.006) 1.00 0.58 367,209 0.63 0.59 0.63 2003 1.00 0.007 (0.007) 1.00 0.68 287,087 0.63 0.68 0.64 2002 1.00 0.014 (0.014) 1.00 1.37 290,778 0.63 1.37 0.67 Class A (commenced operations on October 18, 1999) 2006 $ 1.00 $ 0.039 $(0.039) $ 1.00 3.94% $ 640,366 0.81% 3.95% 1.10% 2005 1.00 0.019 (0.019) 1.00 1.87 312,452 0.82 1.94 1.11 2004 1.00 0.004 (0.004) 1.00 0.36 201,058 0.85 0.35 1.13 2003 1.00 0.005 (0.005) 1.00 0.46 205,191 0.85 0.47 1.14 2002 1.00 0.011 (0.011) 1.00 1.15 228,807 0.85 1.15 1.17 Class S (commenced operations on October 26, 1999) 2006 $ 1.00 $ 0.037 $(0.037) $ 1.00 3.73% $ 324,353 1.01% 3.74% 1.10% 2005 1.00 0.017 (0.017) 1.00 1.67 203,502 1.02 1.70 1.11 2004 1.00 0.002 (0.002) 1.00 0.21 115,761 1.00 0.21 1.13 2003 1.00 0.003 (0.003) 1.00 0.29 118,624 1.03 0.29 1.14 2002 1.00 0.009 (0.009) 1.00 0.95 129,180 1.05 0.95 1.17 - ------------------------------------------------------------------------------------------------------------------------------------ GOVERNMENT MONEY MARKET FUND Institutional Class (commenced operations on April 3, 2000) 2006 $ 1.00 $ 0.040 $(0.040) $ 1.00 4.08% $ 52,782 0.60% 4.11% 0.61% 2005 1.00 0.020 (0.020) 1.00 2.05 32,039 0.61 1.97 0.62 2004 1.00 0.006 (0.006) 1.00 0.57 43,608 0.63 0.56 0.64 2003 1.00 0.007 (0.007) 1.00 0.70 56,841 0.63 0.68 0.64 2002 1.00 0.014 (0.014) 1.00 1.38 51,985 0.63 1.43 0.66 Class A (commenced operations on June 21, 1999) 2006 $ 1.00 $ 0.038 $(0.038) $ 1.00 3.86% $1,940,602 0.82% 3.78% 1.11% 2005 1.00 0.018 (0.018) 1.00 1.82 1,895,412 0.83 1.80 1.12 2004 1.00 0.004 (0.004) 1.00 0.35 1,857,676 0.85 0.35 1.14 2003 1.00 0.005 (0.005) 1.00 0.48 2,060,860 0.85 0.48 1.14 2002 1.00 0.012 (0.012) 1.00 1.16 2,149,151 0.85 1.18 1.16 Class S (commenced operations on October 6, 1999) 2006 $ 1.00 $ 0.036 $(0.036) $ 1.00 3.65% $ 232,083 1.02% 3.60% 1.11% 2005 1.00 0.016 (0.016) 1.00 1.62 227,905 1.03 1.61 1.12 2004 1.00 0.002 (0.002) 1.00 0.20 263,086 1.00 0.21 1.14 2003 1.00 0.003 (0.003) 1.00 0.30 191,539 1.03 0.31 1.14 2002 1.00 0.010 (0.010) 1.00 0.96 219,387 1.05 0.93 1.16 - ------------------------------------------------------------------------------------------------------------------------------------ CALIFORNIA TAX EXEMPT MONEY MARKET FUND Institutional Class (commenced operations on April 3, 2000) 2006 $ 1.00 $ 0.026 $(0.026) $ 1.00 2.62% $ 85,014 0.55% 2.60% 0.62% 2005 1.00 0.015 (0.015)* 1.00 1.51 73,211 0.55 1.46 0.63 2004 1.00 0.005 (0.005) 1.00 0.52 79,413 0.55 0.51 0.65 2003 1.00 0.006 (0.006) 1.00 0.62 87,820 0.55 0.59 0.65 2002 1.00 0.010 (0.010) 1.00 0.98 58,923 0.55 0.96 0.69 Class A (commenced operations on June 21, 1999) 2006 $ 1.00 $ 0.024 $(0.024) $ 1.00 2.39% $ 631,478 0.78% 2.36% 1.12% 2005 1.00 0.013 (0.013)* 1.00 1.28 569,671 0.78 1.25 1.13 2004 1.00 0.003 (0.003) 1.00 0.29 505,029 0.78 0.29 1.15 2003 1.00 0.004 (0.004) 1.00 0.41 539,182 0.76 0.41 1.15 2002 1.00 0.007 (0.007) 1.00 0.75 519,269 0.78 0.75 1.19 Class S (commenced operations on November 12, 1999) 2006 $ 1.00 $ 0.022 $(0.022) $ 1.00 2.18% $ 107,131 0.98% 2.17% 1.12% 2005 1.00 0.011 (0.011)* 1.00 1.08 88,182 0.98 1.09 1.13 2004 1.00 0.002 (0.002) 1.00 0.15 33,520 0.91 0.15 1.15 2003 1.00 0.003 (0.003) 1.00 0.27 24,002 0.89 0.27 1.15 2002 1.00 0.005 (0.005) 1.00 0.55 29,626 0.98 0.53 1.19 * INCLUDES A REALIZED CAPITAL GAIN DISTRIBUTION OF LESS THAN $0.001. ++ RETURNS ARE FOR THE PERIOD INDICATED AND HAVE NOT BEEN ANNUALIZED. FEE WAIVERS ARE IN EFFECT; IF THEY HAD NOT BEEN IN EFFECT, PERFORMANCE WOULD HAVE BEEN LOWER. RETURNS SHOWN DO NOT REFLECT THE DEDUCTION OF TAXES THAT A SHAREHOLDER WOULD PAY ON FUND DISTRIBUTIONS OR THE REDEMPTION OF FUND SHARES. # RATIO INCLUDES WAIVERS AND PREVIOUSLY WAIVED INVESTMENT ADVISORY FEES RECOVERED. THE IMPACT OF THE RECOVERED FEES MAY CAUSE A HIGHER NET EXPENSE RATIO. (1) ANNUALIZED FOR PERIODS LESS THAN ONE YEAR. SEE ACCOMPANYING NOTES TO FINANCIAL STATEMENTS. CNI CHARTER FUNDS | PAGE 70 notes to financial statements SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- 1. ORGANIZATION: The CNI Charter Funds, a Delaware statutory trust (the "Trust"), is registered under the Investment Company Act of 1940, as amended, as an open-end management investment company with sixteen portfolios. The financial statements included herein are those of the Large Cap Value Equity Fund, Large Cap Growth Equity Fund, RCB Small Cap Value Fund, Technology Growth Fund (collectively, the "Equity Funds"); Corporate Bond Fund, Government Bond Fund, California Tax Exempt Bond Fund, High Yield Bond Fund (collectively, the "Fixed Income Funds"); and Prime Money Market Fund, Government Money Market Fund and California Tax Exempt Money Market Fund (collectively, the "Money Market Funds") (each a "Fund", collectively, the "Funds"). The Equity and Fixed Income Funds are registered to offer Institutional and Class A Shares; in addition, the RCB Small Cap Value Fund is registered to offer Class R Shares. The Money Market Funds are registered to offer Institutional, Class A and Class S Shares. The assets of each Fund are segregated, and a shareholder's interest is limited to the Fund in which shares are held. The Funds' prospectuses provide a description of each Fund's investment objectives, policies and strategies. On April 5, 2005, the Board of Trustees of CNI Charter Funds (the "Trust") approved the reorganization of the AHA Limited Maturity Fixed Income Fund, AHA Full Maturity Fixed Income Fund, AHA Balanced Fund, AHA Diversified Equity Fund, and AHA Socially Responsible Equity Fund series of AHA Investment Funds, Inc. ("AHA Funds") into newly established corresponding series of the Trust. The reorganization was approved by shareholders of AHA Funds and was effective on October 3, 2005. Shares of the AHA Funds are offered through separate prospectuses. To request a prospectus for the AHA Funds, shareholders can call 1-800-445-1341 or write to CNI Charter Funds, c/o SEI Investments Distribution Co., One Freedom Valley Drive, Oaks, Pennsylvania 19456. 2. SIGNIFICANT ACCOUNTING POLICIES: The following is a summary of significant accounting policies followed by the Funds. USE OF ESTIMATES - The preparation of financial statements in conformity with accounting principles generally accepted in the U.S. requires management to make estimates and assumptions that affect the reported amount of assets and liabilities and disclosure of contingent assets and liabilities at the date of the financial statements and the reported amounts of increases and decreases in net assets from operations during the reporting period. Actual results could differ from those estimates. SECURITY VALUATION - Securities listed on a securities exchange, market or automated quotation system for which quotations are readily available (except for securities traded on NASDAQ) are valued at the last quoted sale price on the primary exchange or market (foreign or domestic) on which they are traded, or, if there is no such reported sale, at the most recent quoted bid price. For securities traded on NASDAQ, the NASDAQ Official Closing Price will be used. If available, debt securities are priced based upon valuations provided by independent, third-party pricing agents. Such values generally reflect the last reported sales price if the security is actively traded. The third-party pricing agents may also value debt securities at an evaluated bid price by employing methodologies that utilize actual market transactions, broker-supplied valuations, or other methodologies designed to identify the market value for such securities. Debt obligations with remaining maturities of sixty days or less may be valued at their amortized cost, which approximates market value. The prices for foreign securities are reported in local currency and converted to U.S. dollars using currency exchange rates. Prices for most securities held in the Funds are provided daily by recognized independent pricing agents. If a security price cannot be obtained from an independent, third-party pricing agent, the Funds seek to obtain a bid price from at least one independent broker. Securities for which market prices are not "readily available" are valued in accordance with Fair Value Procedures established by the Funds' Board of Trustees. The Funds' Fair Value Procedures are implemented through a Fair Value Committee (the "Committee") designated by the Funds' Board of Trustees. Some of the more common reasons that may necessitate that a security be valued using Fair Value Procedures include: the security's trading has been halted or suspended; the security has been de-listed from a national exchange; the security's primary trading market is temporarily closed at a time when under normal conditions it would be open; for international securities market events occur after the close of the foreign markets that make closing prices not representative of fair value; or the security's primary pricing source is not able or willing to provide a price. When a security is valued in accordance with the Fair Value Procedures, the Committee will determine the value after taking into consideration relevant information reasonably available to the Committee. SECURITY TRANSACTIONS AND RELATED INCOME - Security transactions are accounted for on the trade date of the security purchase or sale. Costs used in determining net realized capital gains and losses on the sale of securities are those of the specific securities sold. Interest income is recognized on the accrual basis and dividend income is recognized on the ex-dividend date. Purchase discounts and premiums on securities held by the Funds are accreted and amortized to maturity using the scientific method. CNI CHARTER FUNDS | PAGE 71 notes to financial statements SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- REPURCHASE AGREEMENTS - Securities pledged as collateral for repurchase agreements are held by each Fund's custodian bank until maturity of the repurchase agreements. Provisions of the agreements and procedures adopted by the investment adviser require that the market value of the collateral, including accrued interest thereon, is sufficient in the event of default by the counterparty. The Funds also invest in tri-party repurchase agreements. Securities held as collateral for tri-party repurchase agreements are maintained by the broker's custodian bank in a segregated account until maturity of the repurchase agreement. Provisions of the agreements require that the market value of the collateral, including accrued interest thereon, is sufficient in the event of default. If the counterparty defaults and the value of the collateral declines or if the counterparty enters into an insolvency proceeding, realization of the collateral by the Fund may be delayed or limited. TBA TRANSACTIONS - The Funds may engage in "to be announced" ("TBA") security transactions. Such transactions involve a commitment by the Funds to purchase or sell securities for a predetermined price or yield, with payment and delivery taking place beyond the customary settlement period. The Funds record TBA securities on the trade date and maintain security positions such that sufficient liquid assets will be available to make payments for the securities purchased. EXPENSE ALLOCATION -- Common expenses incurred by the Funds are allocated among the Funds (i) based upon relative average daily net assets, (ii) as incurred on a specific identification basis, or (iii) equally among the Funds, depending on the nature of the expenditure. CLASSES - Class-specific expenses are borne by that class. Income, non class-specific expenses, and realized and unrealized gains/losses are allocated to the respective class on the basis of relative net asset value each day. DIVIDENDS AND DISTRIBUTIONS TO SHAREHOLDERS - Dividends from net investment income are declared daily and paid to shareholders monthly for the Fixed Income and Money Market Funds. Dividends from net investment income are declared and paid quarterly for the Large Cap Value Equity, Large Cap Growth Equity, and Technology Growth Funds. For the RCB Small Cap Value Fund, dividends from net investment income are declared and paid annually. Distributions from net realized capital gains are distributed to shareholders at least annually. 3. ADMINISTRATION, TRANSFER AGENT, DISTRIBUTION AND SHAREHOLDER SERVICES AGREEMENTS: Pursuant to an administration agreement (the "Agreement"), SEI Investments Global Funds Services (the "Administrator"), a wholly owned subsidiary of SEI Investments Company, acts as the Trust's Administrator. Under the terms of the Agreement dated April 1, 1999, as amended January 1, 2005, the Administrator is entitled to receive an annual fee of 0.065% of aggregate average daily net assets of the Trust not exceeding $2.5 billion, 0.045% of aggregate average daily net assets of the Trust exceeding $2.5 billion but not exceeding $5 billion, and 0.025% of aggregate average daily net assets of the Trust exceeding $5 billion. Each Fund is subject to a minimum annual fee of $90,000, which may be reduced at the sole discretion of the Administrator. The Trust has adopted a Rule 12b-1 Distribution Plan ("the Plan") with respect to Class A, S and R Shares that allows each Fund to pay distribution and servicing fees. SEI Investments Distribution Co. (the "Distributor"), as compensation for its services under the Plan, receives a distribution fee, computed daily and paid monthly, at the annual rate of 0.50% of the average daily net assets of the Class A Shares and Class S Shares of the Money Market Funds and 0.25% of the Class A Shares of the Equity and Fixed Income Funds and the Class R Shares of the RCB Small Cap Value Fund, with the exception of 0.30% charged to the Class A Shares of the Technology Growth and High Yield Bond Funds, which may be used by the Distributor to provide compensation for sales support and distribution-related activities. The Trust and the Distributor are parties to a Distribution Agreement dated April 1, 1999. The Distributor receives no fees for its distribution services under this agreement. SEI Investments Fund Management serves as Transfer Agent for the Trust whereby they provide services at an annual rate of $15,000 per share class. The Transfer Agent has voluntarily agreed to waive these fees. Forum Shareholder Services, LLC (a division of Citigroup Fund Services, LLC) serves as the Sub-Transfer Agent for the RCB Small Cap Value Fund. U.S. Bank, N.A. serves as Custodian for the Trust. The Custodian plays no role in determining the investment policies of the Trust or which securities are to be purchased or sold by the Trust. The Trust has also adopted a Shareholder Servicing Agreement that permits payment of compensation to service providers, that may include City National Bank ("CNB"), that have agreed to provide certain shareholder support for their customers who own Institutional Class, Class A, Class S or Class R Shares. In consideration for such services, a shareholder servicing fee is charged at the annual rate of up to 0.25% of each Fund's average daily net assets. The Trust has agreed to voluntarily waive shareholder servicing fees to the extent necessary to limit the total CNI CHARTER FUNDS | PAGE 72 - -------------------------------------------------------------------------------- operating expenses of the Fund. For the year ended September 30, 2006, CNB received Shareholder Servicing fees from the Trust in the amount of $8,522,844. Certain officers of the Trust are also officers of City National Asset Management, Inc. ("CNAM", the "Adviser") and the Administrator. Such officers are paid no fees by the Trust for serving as officers of the Trust. 4. INVESTMENT ADVISORY FEES AND OTHER AGREEMENTS: CNAM, a wholly owned subsidiary of CNB, serves as the Investment Manager for the Funds. Under the terms of the current agreement, the Adviser receives an annual fee equal to 0.62% of the average daily net assets of the Large Cap Value Equity Fund, 0.65% of the average daily net assets of the Large Cap Growth Equity Fund, 0.85% of the average net assets of the RCB Small Cap Value Fund, 0.85% of the average daily net assets of the Technology Growth Fund, 0.40% of the average daily net assets of the Corporate Bond Fund, 0.43% of the average daily net assets of the Government Bond Fund, 0.27% of the average daily net assets of the California Tax Exempt Bond Fund, 0.75% of the average daily net assets of the High Yield Bond Fund, 0.25% of the average daily net assets of the Prime Money Market Fund, 0.26% of the average daily net assets of the Government Money Market Fund, and 0.27% of the average daily net assets of the California Tax Exempt Money Market Fund. REED, CONNER & BIRDWELL, LLC acts as the Investment Sub-Adviser on behalf of the RCB Small Cap Value Fund. HSBC HALBIS PARTNERS (USA), INC. acts as the Investment Sub-Adviser on behalf of the High Yield Bond Fund. Sub-Adviser fees are paid by the Adviser. The Adviser has voluntarily agreed to limit its fees or reimburse expenses to the extent necessary to keep operating expenses at or below certain percentages of the respective average daily net assets. The Adviser has voluntarily agreed to maintain this limitation until further notice to the Trust. The voluntary expense limitations (expressed as a percentage of average daily net assets) are as follows: Large Cap Large Cap RCB Value Growth Small Cap Technology Equity Equity Value Growth Fund Fund Fund Fund - -------------------------------------------------------------------------------- Institutional Class 1.00% 1.05% 1.24% 1.20% Class A 1.25% 1.30% 1.49% 1.50% Class R -- -- 1.49% -- - -------------------------------------------------------------------------------- California Corporate Government Tax Exempt High Yield Bond Bond Bond Bond Fund Fund Fund Fund - -------------------------------------------------------------------------------- Institutional Class 0.75% 0.70% 0.50% 1.00% Class A 1.00% 0.95% 0.75% 1.30% - -------------------------------------------------------------------------------- Prime California Money Government Tax Exempt Market Money Market Money Market Fund Fund Fund - -------------------------------------------------------------------------------- Institutional Class 0.63% 0.63% 0.55% Class A 0.85% 0.85% 0.78% Class S 1.05% 1.05% 0.98% - -------------------------------------------------------------------------------- Any fee reductions or expense reimbursements may be repaid to the Adviser within three years after occurrence, subject to certain restrictions and only if such repayments do not cause the Funds' expense ratios, at the time of repayment, to exceed the amounts shown in the preceding table. During the year ended September 30, 2006, the Board of Trustees approved the reimbursement of previously waived fees by the Adviser for the prior fiscal year in the amount of $1,667 and $4,821 for the Technology Growth Fund and Corporate Bond Fund, respectively. As of September 30, 2006, fees which were previously waived by the Adviser which may be subject to possible future reimbursement to the Adviser were as follows: Potential Amount of Fund Recovery (000) Expiration - -------------------------------------------------------------------------------- Government Bond $ 16 2007 18 2008 23 2009 California Tax Exempt Bond 23 2007 25 2008 28 2009 High Yield Bond 42 2007 42 2008 38 2009 California Tax Exempt Money Market 496 2007 430 2008 516 2009 - -------------------------------------------------------------------------------- 5. INVESTMENT TRANSACTIONS: The cost of security purchases and proceeds from the sale and maturities of securities, other than temporary investments in short-term securities for the year ended September 30, 2006, were as follows for the Equity and Fixed Income Funds: Purchases Sales & Maturities - -------------------------------------------------------------------------------- U.S. Gov't Other U.S. Gov't Other Fund (000) (000) (000) (000) - -------------------------------------------------------------------------------- Large Cap Value Equity $ -- $ 68,851 $ -- $ 28,153 Large Cap Growth Equity -- 17,224 -- 15,178 RCB Small Cap Value -- 48,293 -- 56,721 Technology Growth -- 614 -- 718 Corporate Bond 2,909 13,521 821 11,982 Government Bond 26,449 537 18,266 -- California Tax Exempt Bond -- 15,086 -- 10,258 High Yield Bond -- 8,835 -- 11,272 CNI CHARTER FUNDS | PAGE 73 notes to financial statements SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- 6. FEDERAL TAX INFORMATION: It is each Fund's intention to continue to qualify as a regulated investment company for Federal income tax purposes and distribute all of its taxable income and net capital gains. Accordingly, no provisions for Federal income taxes are required. The Funds may be subject to taxes imposed by countries in which they invest, with respect to their investments, in issuers existing or operating in such countries. Such taxes are generally based on income earned. The Funds accrue such taxes when the related income is earned. The timing and characterization of certain income and capital gains distributions are determined annually in accordance with Federal tax regulations, which may differ from accounting principles generally accepted in the United States of America. As a result, net investment income (loss) and net realized gain (loss) on investment transactions for a reporting period may differ significantly from distributions during such period. These book/tax differences may be temporary or permanent. To the extent these differences are permanent in nature, they are charged or credited to undistributed net investment income (loss), accumulated net realized gain (loss), or paid-in-capital, as appropriate, in the period that the differences arise. Accordingly, the following permanent difference, primarily attributable to REIT adjustments, net operating losses, the realized gains (losses) on paydowns and the timing of distributions, have been reclassified to/from the following accounts: Increase Increase (Decrease) (Decrease) Undistributed Accumulated Decrease Net Investment Net Realized Paid-In Income (Loss) Gain (Loss) Capital Fund (000) (000) (000) - -------------------------------------------------------------------------------- Large Cap Growth Equity $ 2 $ (2) $ -- RCB Small Cap Value 5 (5) -- Technology Growth 17 -- (17) Corporate Bond (5) 5 -- Government Bond (4) 4 -- - -------------------------------------------------------------------------------- These reclassifications had no effect on the net assets or net asset value per share. The tax character of dividends and distributions declared during the years ended September 30, 2006 and September 30, 2005 are shown below: Tax Exempt Ordinary Long-term Income Income Capital Gain Total Fund (000) (000) (000) (000) - ------------------------------------------------------------------------------ Large Cap Value Equity 2006 $ -- $ 1,252 $ 3,789 $ 5,041 2005 -- 535 1,908 2,443 Large Cap Growth Equity 2006 -- 101 -- 101 2005 -- 198 -- 198 RCB Small Cap Value 2006 -- 66 1,121 1,187 2005 -- 521 2,493 3,014 Technology Growth 2006 -- 4 -- 4 2005 -- -- -- -- Corporate Bond 2006 -- 2,221 -- 2,221 2005 -- 1,919 303 2,222 Government Bond 2006 -- 1,324 -- 1,324 2005 -- 739 120 859 California Tax Exempt Bond 2006 724 26 68 818 2005 593 -- 82 675 High Yield Bond 2006 -- 3,020 -- 3,020 2005 -- 3,404 -- 3,404 Prime Money Market 2006 -- 43,643 -- 43,643 2005 -- 14,619 -- 14,619 Government Money Market 2006 -- 85,649 -- 85,649 2005 -- 38,829 -- 38,829 California Tax Exempt Money Market 2006 19,281 -- -- 19,281 2005 9,088 -- 173 9,261 CNI CHARTER FUNDS | PAGE 74 - -------------------------------------------------------------------------------- As of September 30, 2006, the components of Distributable Earnings/(Accumulated Losses) on a tax basis were as follows: Undistributed Undistributed Undistributed Capital Unrealized Tax-Exempt Ordinary Long-term Loss Post-October Appreciation Income Income Capital Gain Carryforwards Losses (Depreciation) Fund (000) (000) (000) (000) (000) (000) - ---------------------------------------------------------------------------------------------------------------------------- Large Cap Value Equity $ -- $ 303 $ 5,197 $ -- $ -- $ 17,218 Large Cap Growth Equity -- 22 -- (2,998) -- 4,119 RCB Small Cap Value -- 2 1,108 -- -- 12,695 Technology Growth -- -- -- (1,504) -- 191 Corporate Bond -- 198 -- (64) (271) (374) Government Bond -- 130 -- (59) (355) (232) California Tax Exempt Bond 65 -- -- -- (42) 77 High Yield Bond -- 245 -- (1,233) (22) (37) Prime Money Market -- 5,059 -- (403) -- -- Government Money Market -- 8,376 -- -- -- -- California Tax Exempt Money Market 1,831 -- -- -- -- -- Other Total Temporary Distributable Earnings Differences (Accumulated Losses) Fund (000) (000) - ---------------------------------------------------------------------- Large Cap Value Equity $ (304) $ 22,414 Large Cap Growth Equity (24) 1,119 RCB Small Cap Value -- 13,806 Technology Growth -- (1,313) Corporate Bond (199) (710) Government Bond (130) (646) California Tax Exempt Bond (66) 34 High Yield Bond (245) (1,292) Prime Money Market (5,057) (401) Government Money Market (8,374) 2 California Tax Exempt Money Market (1,830) 1 For tax purposes, the losses in the Funds can be carried forward for a maximum of eight years to offset any future net realized capital gains. At September 30, 2006, the breakdown of capital loss carryforwards is as follows: Expiring September 30, - -------------------------------------------------------------------------------- 2010 2011 2012 2013 2014 Fund (000) (000) (000) (000) (000) - -------------------------------------------------------------------------------- Large Cap Growth Equity $1,482 $1,516 $ -- $ -- $ -- Technology Growth 290 658 328 228 -- Corporate Bond -- -- -- -- 64 Government Bond -- -- -- -- 59 High Yield Bond 33 932 -- -- 268 Prime Money Market 403 -- -- -- -- - -------------------------------------------------------------------------------- During the year ended September 30, 2006, the following funds had utilized capital loss carryforwards to offset capital gains amounting to: Amount Fund (000) - -------------------------------------------------------------------------------- Large Cap Growth Equity $ 1,412 Technology Growth 102 - -------------------------------------------------------------------------------- Post-October losses represent losses realized on investments and foreign currency transactions from November 1, 2005 through September 30, 2006 that, in accordance with Federal income tax regulations, the Funds have elected to defer and treat as having arisen in the following fiscal year. The aggregate gross unrealized appreciation on securities, the aggregate gross unrealized (depreciation) on securities and the net unrealized appreciation/(depreciation) for tax purposes at September 30, 2006 for each of the Equity and Fixed Income Funds were as follows: Aggregate Aggregate Net Gross Gross Unrealized Federal Unrealized Unrealized Appreciation Tax Cost Appreciation Depreciation (Depreciation) Fund (000) (000) (000) (000) - -------------------------------------------------------------------------------- Large Cap Value Equity $ 88,821 $ 18,185 $ (967) $ 17,218 Large Cap Growth Equity 41,894 6,144 (2,025) 4,119 RCB Small Cap Value 56,824 13,463 (768) 12,695 Technology Growth 2,491 508 (317) 191 Corporate Bond 57,426 351 (725) (374) Government Bond 37,369 58 (290) (232) California Tax Exempt Bond 26,847 171 (94) 77 High Yield Bond 40,541 965 (1,002) (37) - -------------------------------------------------------------------------------- 7. CONCENTRATION OF CREDIT RISK: In the normal course of business, the Funds enter into contracts that provide general indemnifications. The Funds' maximum exposure under these arrangements is dependent on future claims that may be made against the Funds and, therefore, cannot be established; however, based on experience, the risk of loss from such claim is considered remote. CALIFORNIA TAX EXEMPT FUNDS - SPECIFIC RISKS The ability of issuers to pay interest on, and repay principal of, California municipal securities may be affected by economic and political developments in the State of California. Certain securities are backed by letters of credit from various financial institutions and financial guaranty assurance agencies. These letters of credit enhance the credit quality of the individual securities; however, if any of the financial institutions or financial guaranty assurance agencies' credit quality should deteriorate, it could cause the individual security's credit quality to change. Additionally, if any of the Funds concentrate their letters of credit in any one financial institution, the risk of credit quality deterioration increases. CNI CHARTER FUNDS | PAGE 75 notes to financial statements SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- 8. CAPITAL SHARES ISSUED AND REDEEMED: Capital share activity for the years ended September 30, 2006 and 2005 were as follows: Large Cap Value Large Cap Growth RCB Small Cap Technology Equity Fund (000) Equity Fund (000) Value Fund (000) Growth Fund (000) ------------------ ------------------ ----------------- ------------------ 2006 2005 2006 2005 2006 2005 2006 2005 - -------------------------------------------------------- ------------------ ----------------- ------------------ CAPITAL SHARES ISSUED AND REDEEMED: INSTITUTIONAL CLASS: Shares Issued 5,652 877 1,054 1,493 192 279 80 113 Shares Issued in Lieu of Dividends and Distributions 304 74 4 7 6 12 1 -- Shares Redeemed (1,488) (821) (1,036) (684) (211) (130) (85) (101) - -------------------------------------------------------- ------------------ ----------------- ------------------ Net Institutional Class Transactions 4,468 130 22 816 (13) 161 (4) 12 ======================================================== ================== ================= ================== CLASS A: Shares Issued 275 515 425 454 41 259 34 9 Shares Issued in Lieu of Dividends and Distributions 50 36 1 3 5 14 -- -- Shares Redeemed (177) (149) (202) (111) (122) (101) (52) (15) - -------------------------------------------------------- ------------------ ----------------- ------------------ Net Class A Transactions 148 402 224 346 (76) 172 (18) (6) ======================================================== ================== ================= ================== CLASS R: Shares Issued -- -- -- -- 433 1,014 -- -- Shares Issued in Lieu of Dividends and Distributions -- -- -- -- 27 73 -- -- Shares Redeemed -- -- -- -- (863) (389) -- -- - -------------------------------------------------------- ------------------ ----------------- ------------------ Net Class R Transactions -- -- -- -- (403) 698 -- -- ======================================================== ================== ================= ================== California High Yield Corporate Bond Government Bond Tax Exempt Bond Bond Fund (000) Fund (000) Fund (000) Fund (000) ------------------ ------------------ ----------------- ------------------ 2006 2005 2006 2005 2006 2005 2006 2005 - -------------------------------------------------------- ------------------ ----------------- ------------------ CAPITAL SHARES ISSUED AND REDEEMED: INSTITUTIONAL CLASS: Shares Issued 1,551 1,476 1,325 1,238 865 867 460 648 Shares Issued in Lieu of Dividends and Distributions 40 38 33 20 25 13 100 102 Shares Redeemed (1,139) (967) (594) (521) (565) (370) (726) (708) - -------------------------------------------------------- ------------------ ----------------- ------------------ Net Institutional Class Transactions 452 547 764 737 325 510 (166) 42 ======================================================== ================== ================= ================== CLASS A: Shares Issued 14 58 135 26 3 29 204 485 Shares Issued in Lieu of Dividends and Distributions 3 3 1 1 1 2 92 99 Shares Redeemed (35) (55) (16) (15) (38) (120) (383) (478) - -------------------------------------------------------- ------------------ ----------------- ------------------ Net Class A Transactions (18) 6 120 12 (34) (89) (87) 106 ======================================================== ================== ================= ================== AMOUNTS DESIGNATED AS "--" ARE EITHER $0 OR HAVE BEEN ROUNDED TO $0. CNI CHARTER FUNDS | PAGE 76 - -------------------------------------------------------------------------------- California Prime Government Tax Exempt Money Market Money Market Money Market Fund (000) Fund (000) Fund (000) ------------------------ ------------------------ ------------------------- 2006 2005 2006 2005 2006 2005 - -------------------------------------------------------------- ------------------------ ------------------------- CAPITAL SHARES ISSUED AND REDEEMED: INSTITUTIONAL CLASS: Shares Issued 1,690,942 1,215,600 635,895 376,258 1,444,514 1,139,802 Shares Issued in Lieu of Dividends and Distributions 2,507 1,411 2 7 -- 8 Shares Redeemed (1,637,671) (1,251,828) (615,154) (387,834) (1,432,711) (1,145,985) - -------------------------------------------------------------- ------------------------ ------------------------- Net Institutional Class Transactions 55,778 (34,817) 20,743 (11,569) 11,803 (6,175) ============================================================== ======================== ========================= CLASS A: Shares Issued 2,204,941 958,549 5,761,555 4,965,371 2,014,013 1,822,478 Shares Issued in Lieu of Dividends and Distributions 5,522 982 51,511 23,227 12,188 6,066 Shares Redeemed (1,882,549) (848,138) (5,767,874) (4,950,864) (1,964,398) (1,763,753) - -------------------------------------------------------------- ------------------------ ------------------------- Net Class A Transactions 327,914 111,393 45,192 37,734 61,803 64,791 ============================================================== ======================== ========================= CLASS S: Shares Issued 1,261,525 499,380 1,013,412 689,747 348,788 271,376 Shares Issued in Lieu of Dividends and Distributions -- -- -- -- -- -- Shares Redeemed (1,140,675) (411,638) (1,009,234) (724,928) (329,840) (216,708) - -------------------------------------------------------------- ------------------------ ------------------------- Net Class S Transactions 120,850 87,742 4,178 (35,181) 18,948 54,668 ============================================================== ======================== ========================= AMOUNTS DESIGNATED AS "--" ARE EITHER $0 OR HAVE BEEN ROUNDED TO $0. 9. NEW ACCOUNTING PRONOUNCEMENTS On July 13, 2006, the Financial Accounting Standards Board (FASB) released FASB Interpretation No. 48 "Accounting for Uncertainty in Income Taxes" (FIN 48). FIN 48 provides guidance for how uncertain tax positions should be recognized, measured, presented and disclosed in the financial statements. FIN 48 requires the evaluation of tax positions taken or expected to be taken in the course of preparing the fund's tax returns to determine whether the tax positions are "more-likely-than-not" of being sustained by the applicable tax authority. Tax positions not deemed to meet the more-likely-than-not threshold would be recorded as a tax benefit or expense in the current year. Adoption of FIN 48 is required for fiscal years beginning after December 15, 2006 and is to be applied to all open tax years as of the effective date. At this time, management is evaluating the implications of FIN 48 and its impact in the financial statements has not yet been determined. In September 2006, the Financial Accounting Standards Board (FASB) issued Statement on Financial Accounting Standards (SFAS) No. 157, "Fair Value Measurements." This standard establishes a single authoritative definition of fair value, sets out a framework for measuring fair value and requires additional disclosures about fair value measurements. SFAS No. 157 applies to fair value measurements already required or permitted by existing standards. SFAS No. 157 is effective for financial statements issued for fiscal years beginning after November 15, 2007 and interim periods within those fiscal years. The changes to current generally accepted accounting principles from the application of this Statement relate to the definition of fair value, the methods used to measure fair value, and the expanded disclosures about fair value measurements. As of September 30, 2006, the Funds do not believe the adoption of SFAS No. 157 will impact the amounts reported in the financial statements, however, additional disclosures may be required about the inputs used to develop the measurements and the effect of certain of the measurements reported in the financial statements for a fiscal period. CNI CHARTER FUNDS | PAGE 77 report of independent registered public accounting firm - -------------------------------------------------------------------------------- TO THE SHAREHOLDERS AND BOARD OF TRUSTEES OF CNI CHARTER FUNDS: We have audited the accompanying statements of assets and liabilities of the CNI Charter Funds, comprised of the Large Cap Value Equity Fund, the Large Cap Growth Equity Fund, the RCB Small Cap Value Fund, the Technology Growth Fund, the Corporate Bond Fund, the Government Bond Fund, the California Tax Exempt Bond Fund, the High Yield Bond Fund, the Prime Money Market Fund, the Government Money Market Fund, and the California Tax Exempt Money Market Fund (collectively, "the Funds"), including the schedules of investments, as of September 30, 2006, and the related statements of operations for the year then ended and changes in net assets for each of the years in the two-year period then ended, and financial highlights for each of the years or periods indicated herein. These financial statements and financial highlights are the responsibility of the Funds' management. Our responsibility is to express an opinion on these financial statements and the financial highlights based on our audit. We conducted our audits in accordance with the standards of the Public Company Accounting Oversight Board (United States). Those standards require that we plan and perform the audit to obtain reasonable assurance about whether the financial statements and financial highlights are free of material misstatement. An audit includes examining, on a test basis, evidence supporting the amounts and disclosures in the financial statements and financial highlights. Our procedures included confirmation of securities owned as of September 30, 2006, by correspondence with the custodian and brokers or by other appropriate audit procedures when replies from brokers were not received. An audit also includes assessing the accounting principles used and significant estimates made by management, as well as evaluating the overall financial statement presentation. We believe that our audits provide a reasonable basis for our opinion. In our opinion, the financial statements and financial highlights referred to above present fairly, in all material respects, the financial position of the Funds as of September 30, 2006, the results of their operations, the changes in their net assets, and their financial highlights for the periods indicated, in conformity with accounting principles generally accepted in the United States of America. /s/ KPMG LLP NOVEMBER 22, 2006 CNI CHARTER FUNDS | PAGE 78 board members and officers (UNAUDITED) SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- Information pertaining to the Trustees and Officers of the Trust is set forth below as of October 3, 2006. Trustees who are not deemed to be "interested persons" of the Trust as defined in the 1940 Act are referred to as "Independent Board Members." Trustees who are deemed to be "interested persons" of the Trust are referred to as "Interested Board Members." - ------------------------------------------------------------------------------------------------------------------------------------ TERM OF NUMBER OF OFFICE PORTFOLIOS IN AND CNI CHARTER OTHER NAME POSITION(S) LENGTH OF FUNDS COMPLEX DIRECTORSHIPS ADDRESS, HELD WITH TIME PRINCIPAL OCCUPATION(S) OVERSEEN BY HELD BY AND AGE 1 TRUST SERVED 2 DURING PAST FIVE YEARS BOARD MEMBER 3 TRUSTEE 4 - ------------------------------------------------------------------------------------------------------------------------------------ INDEPENDENT BOARD MEMBERS Irwin G. Barnet Trustee Since 1999 Attorney and partner at Reed Smith LLP, 16 None Age: 68 a law firm (January 2003-Present); attorney and a principal of Crosby, Heafey, Roach & May, a law firm (September 2000-December 2002); attorney and principal of Sanders, Barnet, Goldman, Simons & Mosk, a law firm prior to September, 2000. - ------------------------------------------------------------------------------------------------------------------------------------ Victor Meschures Trustee Since 1999 Certified Public Accountant with Meschures, 16 None Age: 68 Campeas, Thompson, Snyder and Pariser, LLP, an accounting firm. - ------------------------------------------------------------------------------------------------------------------------------------ William R. Sweet Trustee Since 1999 Retired. 16 None Age: 69 - ------------------------------------------------------------------------------------------------------------------------------------ James R. Wolford Trustee Since 1999 Chief Financial Officer, Bixby Land Company, 16 None Age: 52 a real estate company (September, 2004-Present); Regional Financial Officer, AIMCO, a real estate investment trust (January, 2004- September, 2004); Chief Financial Officer, DBM Group, a direct mail marketing company (August, 2001- January, 2004); Senior Vice President and Chief Operating Officer, Forecast Commercial Real Estate Service, Inc. (January, 2000- August, 2001); Senior Vice President and Chief Financial Officer, Bixby Ranch Company (1985- January, 2000). - ------------------------------------------------------------------------------------------------------------------------------------ OFFICERS Vernon C. Kozlen President Since 2000 Executive Vice President and Director of N/A N/A City National Bank and Chief Asset Management Development, City 400 N. Roxbury Dr. Executive National Bank ("CNB") (1996-present); Beverly Hills, Officer Director, Reed, Conner & Birdwell, L.L.C. CA 90210 (2000-present) and Convergent Capital Age: 63 -Management, LLC (2003-present). Formerly, Chairman of the Board, City National Asset Management, Inc. ("CNAM, Inc.") (2001- September 2005) and City National Securities, Inc. ("CNS") (1999-September 2005); and Director, CNAM, Inc. (2001-April 2006) and CNS (1999-April 2006). - ------------------------------------------------------------------------------------------------------------------------------------ Rodney J. Olea Vice President Since 2000 Senior Vice President, City National Asset N/A N/A City National Bank Management, Inc. (2001-Present); Senior Vice President and Director of Fixed Income of 400 N. Roxbury Dr. City National Bank (1994-Present). Beverly Hills, CA 90210 Age: 41 - ------------------------------------------------------------------------------------------------------------------------------------ CNI CHARTER FUNDS | PAGE 79 board members and officers (UNAUDITED) (CONTINUED) SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- Information pertaining to the Trustees and Officers of the Trust is set forth below as of October 3, 2006. Trustees who are not deemed to be "interested persons" of the Trust as defined in the 1940 Act are referred to as "Independent Board Members." Trustees who are deemed to be "interested persons" of the Trust are referred to as "Interested Board Members." The Trust's Statement of Additional Information ("SAI") includes additional information about the Board Members and Officers. The SAI may be obtained without charge by calling 1-800-708-8881. - ------------------------------------------------------------------------------------------------------------------------------------ TERM OF NUMBER OF OFFICE PORTFOLIOS IN AND CNI CHARTER OTHER NAME POSITION(S) LENGTH OF FUNDS COMPLEX DIRECTORSHIPS ADDRESS, HELD WITH TIME PRINCIPAL OCCUPATION(S) OVERSEEN BY HELD BY AND AGE 1 TRUST SERVED 2 DURING PAST FIVE YEARS BOARD MEMBER 3 TRUSTEE 4 - ------------------------------------------------------------------------------------------------------------------------------------ OFFICERS (CONTINUED) Richard A. Weiss Vice President Since 2000 President, CNAM, Inc. (2001-Present); N/A N/A City National Bank and Executive Vice President and Chief 400 N. Roxbury Dr., Assistant Investment Officer, CNB (1999-Present); Beverly Hills, CA Secretary Director, City National Securities 90210 (April 2003-present). Formerly, Age: 46 Executive Vice President and Chief Investment Officer, Sanwa Bank California (1994-1999). - ------------------------------------------------------------------------------------------------------------------------------------ Valerie Y. Lewis Vice President Since 2005 Chief Compliance Officer, CNAM, Inc. N/A N/A City National Bank and Chief (August, 2005- Present). Formerly, Fund 400 N. Roxbury Dr. Compliance Boards Specialist - Assistant Secretary, Beverly Hills, Officer Capital Research and Management CA 90210 Company and Capital International, Age: 50 Inc. (1999-2005). - ------------------------------------------------------------------------------------------------------------------------------------ Eric Kleinschmidt Controller and Since 2005 SEI Investments, Director of Fund N/A N/A SEI Investments Chief Accounting, (2004-Present). Formerly, One Freedom Operating Manager of Fund Accounting Valley Drive Officer (1999-2004). Oaks, PA 19456 Age: 38 - ------------------------------------------------------------------------------------------------------------------------------------ Timothy Solberg Vice President Since 2005 Managing Director and Chief Investment N/A N/A 109 S. Lasalle Street and Assistant Officer, CCMA (2001-Present). Suite 2800 Secretary Formerly, Director of Marketing and Chicago, IL 60603 Client Services, Hewitt Investment Age: 53 Group, a Division of Hewitt Associates LLC (1989-2001). - -------------------- 1 Each trustee may be contacted by writing to the Trustee c/o CNI Charter Funds, One Freedom Valley Drive, Oaks, PA 19456. 2 Each trustee shall hold office during the lifetime of this Trust until he or she dies, resigns, is declared bankrupt or incompetent by a court of appropriate jurisdiction, or is removed, or, if sooner, until the next meeting of shareholders is called for the purpose of electing trustees and until the election and qualification of his or her successor in accordance with the Trust's Declaration of Trust. The president, treasurer and secretary shall hold office until their respective successors are chosen or qualified, or until their removal or resignation, or in each case until he or she sooner dies, resigns, is removed, or becomes disqualified in accordance with the Trust's by-laws. 3 The "CNI Charter Funds Complex" consists of all registered investment companies for which City National Asset Management, Inc. serves as investment adviser. As of September 30, 2006, the CNI Charter Funds Complex consisted of 16 Funds. 4 Directorships of companies required to report to the Securities and Exchange Commission under the Securities Exchange Act of 1934 (i.e., "public companies") or other investment companies registered under the 1940 Act. CNI CHARTER FUNDS | PAGE 80 - -------------------------------------------------------------------------------- - ------------------------------------------------------------------------------------------------------------------------------------ TERM OF NUMBER OF OFFICE PORTFOLIOS IN AND CNI CHARTER OTHER NAME POSITION(S) LENGTH OF FUNDS COMPLEX DIRECTORSHIPS ADDRESS, HELD WITH TIME PRINCIPAL OCCUPATION(S) OVERSEEN BY HELD BY AND AGE 1 TRUST SERVED 2 DURING PAST FIVE YEARS BOARD MEMBER 3 TRUSTEE 4 - ------------------------------------------------------------------------------------------------------------------------------------ OFFICERS Timothy D. Barto Vice President Since 2000 Attorney, Vice President and Assistant N/A N/A One Freedom and Assistant Secretary of SEI Investments (1999- Valley Drive Secretary Present); Vice President and Assistant Oaks, PA 19456 Secretary of Administrator (1999- Age: 38 Present); Officer of various investment companies administered by Administrator (1999-Present). Formerly, Assistant Secretary of the Distributor (2003-2004); Vice President of the Distributor (1999-2004). - ------------------------------------------------------------------------------------------------------------------------------------ Phillip T. Masterson Vice President Since 2005 Attorney, employed by SEI Investments N/A N/A SEI Investments and Assistant (August 2004-Present). Formerly, General One Freedom Secretary Counsel, Citco Mutual Fund Services Valley Drive (2003-2004); and Vice President and Associate Oaks, PA 19456 Counsel, Oppenheimer Funds (1998-2003). Age: 42 - ------------------------------------------------------------------------------------------------------------------------------------ James Ndiaye Vice President Since 2005 Attorney, Employed by SEI Investments N/A N/A SEI Investments and Assistant Company (2004-Present). Formerly, Vice President, One Freedom Secretary Deutsche Asset Management (2003-2004); Valley Drive Associate, Morgan Lewis & Bockius LLP Oaks, PA 19456 (2000-2003); and Assistant Vice President, Age: 38 ING Variable Annuities Group (1999-2000). - ------------------------------------------------------------------------------------------------------------------------------------ Sofia A. Rosala Vice President Since 2005 Vice President and Assistant Secretary N/A N/A SEI Investments and Assistant of SEI Investments Fund Management One Freedom Secretary (2005-present). Formerly, Compliance Officer Valley Drive of SEI Investments (2001-2004); and Account Oaks, PA 19456 and Product Consultant, SEI Private Age: 32 Trust Company (1998-2001). - ------------------------------------------------------------------------------------------------------------------------------------ Michael T. Pang Vice President Since 2005 Attorney, Employed by SEI Investments N/A N/A SEI Investments and Assistant Company (January 2005). Formerly, Counsel, One Freedom Secretary Caledonian Bank & Trust's Mutual Funds Valley Drive Group (2004-2005); Counsel, Permal Oaks, PA 19456 Asset Management (2001-2004); Associate, Age: 34 Schulte, Roth & Zabel's Investment Management Group (2000-2001); and Staff Attorney, U.S. SEC's Division of Enforcement, Northeast Regional Office (1997-2000). - ------------------------------------------------------------------------------------------------------------------------------------ CNI CHARTER FUNDS | PAGE 81 notice to shareholders (UNAUDITED) SEPTEMBER 30, 2006 - -------------------------------------------------------------------------------- For shareholders that do not have a September 30, 2006 taxable year end, this notice is for informational purposes only. For shareholders with a September 30, 2006 taxable year end, please consult your tax advisor as to the pertinence of this notice. For California income tax purposes, for the fiscal year ended September 30, 2006, California Tax Exempt Bond Fund and California Tax Exempt Money Market Fund designate 100% and 100%, respectively, of their distributions paid from net investment income as exempt-interest dividends under Section 17145 of the California Revenue and Taxation Code. For Federal income tax purposes, for the fiscal year ended September 30, 2006 each Fund is designating the following items with regard to distributions paid during the year: (E) (F) DIVIDENDS QUALIFYING (A) (B) QUALIFYING DIVIDEND RETURN LONG TERM ORDINARY (C) (D) FOR CORPORATE INCOME OF CAPITAL GAIN INCOME TAX EXEMPT TOTAL DIVIDENDS REC. (15% RATE CAPITAL DISTRIBUTIONS DISTRIBUTIONS INTEREST DISTRIBUTIONS DEDUCTION(1) FOR QDI)(2) - ----------------------------------------------------------------------------------------------------------------------- Large Cap Value Equity Fund 0% 78% 22% 0% 100% 100% 100% Large Cap Growth Equity Fund 0% 0% 100% 0% 100% 100% 100% RCB Small Cap Value Fund 0% 94% 6% 0% 100% 100% 100% Technology Growth Fund 1% 0% 99% 0% 100% 100% 100% Corporate Bond Fund 0% 0% 100% 0% 100% 0% 0% Government Bond Fund 0% 0% 100% 0% 100% 0% 0% California Tax Exempt Bond Fund 0% 9% 3% 88% 100% 0% 0% High Yield Bond Fund 0% 0% 100% 0% 100% 0% 0% Prime Money Market Fund 0% 0% 100% 0% 100% 0% 0% Government Money Market Fund 0% 0% 100% 0% 100% 0% 0% California Tax Exempt Money Market Fund 0% 0% 0% 100% 100% 0% 0% - ----------------------------------------------------------------------------------------------------------------------- (G) (H) (I) U.S. QUALIFIED QUALIFIED GOVERNMENT INTEREST SHORT-TERM INTEREST (3) INCOME (4) CAPITAL GAIN (5) - ------------------------------------------------------------------ Large Cap Value Equity Fund 0.75% 0.86% 0.00% Large Cap Growth Equity Fund 0.00% 0.00% 0.00% RCB Small Cap Value Fund 0.00% 0.14% 0.00% Technology Growth Fund 0.00% 0.00% 0.00% Corporate Bond Fund 3.01% 92.45% 0.00% Government Bond Fund 36.41% 93.93% 0.00% California Tax Exempt Bond Fund 0.00% 92.43% 0.00% High Yield Bond Fund 0.00% 91.71% 0.00% Prime Money Market Fund 7.26% 95.10% 0.00% Government Money Market Fund 22.21% 94.25% 100.00% California Tax Exempt Money Market Fund 0.00% 94.43% 0.00% - ------------------------------------------------------------------ (1) "DIVIDENDS RECEIVED DEDUCTION" REPRESENT DIVIDENDS WHICH QUALIFY FOR THE CORPORATE DIVIDENDS RECEIVED DEDUCTION. (2) "QUALIFYING DIVIDEND INCOME" REPRESENT QUALIFYING DIVIDENDS AS CREATED BY THE JOBS AND GROWTH TAX RELIEF RECONCILIATION ACT OF 2003. IT IS THE INTENTION OF THE FUND TO DESIGNATE THE MAX AMOUNT PERMITTED BY LAW. (3) "U.S. GOVERNMENT INTEREST" REPRESENT THE AMOUNT OF INTEREST THAT WAS DERIVED FROM DIRECT U.S. GOVERNMENT OBLIGATIONS AND DISTRIBUTED DURING THE FISCAL YEAR. GENERALLY, INTEREST FROM DIRECT U.S. GOVERNMENT OBLIGATIONS IS EXEMPT FROM STATE INCOME TAX. HOWEVER, FOR SHAREHOLDERS WHO ARE RESIDENTS OF CALIFORNIA, CONNECTICUT OR NEW YORK, THE STATUTORY THRESHOLD REQUIREMENTS WERE NOT SATISFIED TO PERMIT EXEMPTION OF THESE AMOUNTS FROM STATE INCOME. (4) "QUALIFIED INTEREST INCOME" REPRESENT QUALIFYING INTEREST THAT IS EXEMPT FROM U.S. WITHHOLDING TAX WHEN PAID TO FOREIGN INVESTORS AS CREATED BY THE AMERICAN JOBS CREATION ACT OF 2004. (5) "QUALIFIED SHORT-TERM CAPITAL GAIN" REPRESENT QUALIFYING SHORT-TERM CAPITAL GAIN THAT IS EXEMPT FROM U.S. WITHHOLDING TAX WHEN PAID TO FOREIGN INVESTORS AS CREATED BY THE AMERICAN JOBS CREATION ACT OF 2004. ITEMS (A), (B), ( C) AND (D) ARE BASED ON THE PERCENTAGE OF EACH FUND'S TOTAL DISTRIBUTION. ITEMS (E) AND (F) ARE BASED ON THE PERCENTAGE OF "ORDINARY INCOME DISTRIBUTIONS." ITEM (G) IS BASED ON THE PERCENTAGE OF GROSS INCOME OF EACH FUND. ITEM (H) IS BASED ON THE PERCENTAGE OF NET INVESTMENT INCOME DISTRIBUTIONS. ITEM (I) IS BASED ON THE PERCENTAGE OF SHORT-TERM CAPITAL GAIN DISTRIBUTIONS. CNI CHARTER FUNDS | PAGE 82 disclosure of fund expenses (UNAUDITED) - -------------------------------------------------------------------------------- All mutual funds have operating expenses. As a shareholder of the Fund, your investment is affected by these ongoing costs, which include (among others) costs for portfolio management, administrative services, and shareholder reports like this one. It is important for you to understand the impact of these costs on your investment returns. Operating expenses such as these are deducted from the Fund's gross income and directly reduce your final investment return. These expenses are expressed as a percentage of the Fund's average net assets; this percentage is known as the Fund's expense ratio. The following examples use the expense ratio and are intended to help you understand the ongoing costs (in dollars) of investing in your Fund and to compare these costs with those of other mutual funds. The examples are based on an investment of $1,000 made at the beginning of the period shown and held for the entire period. The table below illustrates your Fund's costs in two ways: ACTUAL FUND RETURN. This section helps you to estimate the actual expenses that your Fund incurred over the period. The "Expenses Paid During Period" column shows the actual dollar expense cost incurred by a $1,000 investment in the Fund, and the "Ending Account Value" number is derived from deducting that expense cost from the Fund's gross investment return. You can use this information, together with the actual amount you invested in the Fund, to estimate the expenses you paid over that period. Simply divide your actual account value by $1,000 to arrive at a ratio (for example, an $8,600 account value divided by $1,000 = $8.6), then multiply that ratio by the number shown for your Fund under "Expenses Paid During Period." HYPOTHETICAL 5% RETURN. This section helps you compare your Fund's costs with those of other mutual funds. It assumes that the Fund had an annual 5% return before expenses during the year, but that the expense ratio (Column 3) for the period is unchanged. This example is useful in making comparisons because the Securities and Exchange Commission requires all mutual funds to make this 5% calculation. You can assess your Fund's comparative cost by comparing the hypothetical result for your Fund in the "Expenses Paid During Period" column with those that appear in the same charts in the shareholder reports for other funds. NOTE: Because the return is set at 5% for comparison purposes - NOT your Fund's actual return - the account values shown do not apply to your specific investment. BEGINNING ENDING EXPENSES ACCOUNT ACCOUNT ANNUALIZED PAID VALUE VALUE EXPENSE DURING 4/1/06 9/30/06 RATIOS PERIOD* - -------------------------------------------------------------------------------- LARGE CAP VALUE FUND - -------------------------------------------------------------------------------- ACTUAL FUND RETURN Institutional Class $1,000.00 $1,054.20 0.97% $5.00 Class A 1,000.00 1,053.00 1.22% 6.28 HYPOTHETICAL 5% RETURN Institutional Class 1,000.00 $1,020.21 0.97% $4.91 Class A 1,000.00 1,018.95 1.22% 6.17 BEGINNING ENDING EXPENSES ACCOUNT ACCOUNT ANNUALIZED PAID VALUE VALUE EXPENSE DURING 4/1/06 9/30/06 RATIOS PERIOD* - -------------------------------------------------------------------------------- LARGE CAP GROWTH FUND - -------------------------------------------------------------------------------- ACTUAL FUND RETURN Institutional Class $1,000.00 $1,012.20 0.99% $4.99 Class A 1,000.00 1,012.40 1.24% 6.26 HYPOTHETICAL 5% RETURN Institutional Class $1,000.00 $1,020.10 0.99% $5.01 Class A 1,000.00 1,018.85 1.24% 6.28 * Expenses are equal to the Fund's annualized expense ratio multiplied by the average account value over the period, multiplied by 183/365 (to reflect one-half year period). CNI CHARTER FUNDS | PAGE 83 disclosure of fund expenses (UNAUDITED) (CONCLUDED) - -------------------------------------------------------------------------------- BEGINNING ENDING EXPENSES ACCOUNT ACCOUNT ANNUALIZED PAID VALUE VALUE EXPENSE DURING 4/1/06 9/30/06 RATIOS PERIOD* - -------------------------------------------------------------------------------- RCB SMALL CAP VALUE FUND - -------------------------------------------------------------------------------- ACTUAL FUND RETURN Institutional Class $1,000.00 $ 976.80 1.21% $6.00 Class A 1,000.00 975.60 1.46% 7.23 Class R 1,000.00 975.60 1.46% 7.23 HYPOTHETICAL 5% RETURN Institutional Class $1,000.00 $1,019.00 1.21% $6.12 Class A 1,000.00 1,017.75 1.46% 7.38 Class R 1,000.00 1,017.75 1.46% 7.38 - -------------------------------------------------------------------------------- TECHNOLOGY FUND - -------------------------------------------------------------------------------- ACTUAL FUND RETURN Institutional Class $1,000.00 $ 981.70 1.13% $5.61 Class A 1,000.00 979.20 1.43% 7.10 HYPOTHETICAL 5% RETURN Institutional Class $1,000.00 $1,019.40 1.13% $5.72 Class A 1,000.00 1,017.90 1.43% 7.23 - -------------------------------------------------------------------------------- CORPORATE BOND FUND - -------------------------------------------------------------------------------- ACTUAL FUND RETURN Institutional Class $1,000.00 $1,032.60 0.75% $3.82 Class A 1,000.00 1,030.30 1.00% 5.09 HYPOTHETICAL 5% RETURN Institutional Class $1,000.00 $1,021.31 0.75% $3.80 Class A 1,000.00 1,020.05 1.00% 5.06 - -------------------------------------------------------------------------------- GOVERNMENT BOND FUND - -------------------------------------------------------------------------------- ACTUAL FUND RETURN Institutional Class $1,000.00 $1,028.00 0.70% $3.56 Class A 1,000.00 1,025.70 0.94% 4.77 HYPOTHETICAL 5% RETURN Institutional Class $1,000.00 $1,021.56 0.70% $3.55 Class A 1,000.00 1,020.36 0.94% 4.76 - -------------------------------------------------------------------------------- CALIFORNIA TAX-EXEMPT BOND FUND - -------------------------------------------------------------------------------- ACTUAL FUND RETURN Institutional Class $1,000.00 $1,027.70 0.50% $2.54 Class A 1,000.00 1,025.30 0.75% 3.81 HYPOTHETICAL 5% RETURN Institutional Class $1,000.00 $1,022.56 0.50% $2.54 Class A 1,000.00 1,021.31 0.75% 3.80 BEGINNING ENDING EXPENSES ACCOUNT ACCOUNT ANNUALIZED PAID VALUE VALUE EXPENSE DURING 4/1/06 9/30/06 RATIOS PERIOD* - -------------------------------------------------------------------------------- HIGH YIELD BOND FUND - -------------------------------------------------------------------------------- ACTUAL FUND RETURN Institutional Class $1,000.00 $1,031.60 1.00% $5.09 Class A 1,000.00 1,030.10 1.30% 6.62 HYPOTHETICAL 5% RETURN Institutional Class $1,000.00 $1,020.05 1.00% $5.06 Class A 1,000.00 1,018.55 1.30% 6.58 - -------------------------------------------------------------------------------- PRIME MONEY MARKET FUND - -------------------------------------------------------------------------------- ACTUAL FUND RETURN Institutional Class $1,000.00 $1,023.00 0.60% $3.04 Class A 1,000.00 1,021.80 0.82% 4.16 Class S 1,000.00 1,020.80 1.01% 5.12 HYPOTHETICAL 5% RETURN Institutional Class $1,000.00 $1,022.06 0.60% $3.04 Class A 1,000.00 1,020.96 0.82% 4.15 Class S 1,000.00 1,020.00 1.01% 5.11 - -------------------------------------------------------------------------------- GOVERNMENT MONEY MARKET FUND - -------------------------------------------------------------------------------- ACTUAL FUND RETURN Institutional Class $1,000.00 $1,022.50 0.60% $3.04 Class A 1,000.00 1,021.40 0.82% 4.16 Class S 1,000.00 1,020.40 1.02% 5.12 HYPOTHETICAL 5% RETURN Institutional Class $1,000.00 $1,022.06 0.60% $3.04 Class A 1,000.00 1,020.96 0.82% 4.15 Class S 1,000.00 1,019.95 1.02% 5.16 - -------------------------------------------------------------------------------- CALIFORNIA TAX EXEMPT MONEY MARKET FUND - -------------------------------------------------------------------------------- ACTUAL FUND RETURN Institutional Class $1,000.00 $1,014.40 0.55% $2.78 Class A 1,000.00 1,013.20 0.78% 3.94 Class S 1,000.00 1,012.20 0.98% 4.94 HYPOTHETICAL 5% RETURN Institutional Class $1,000.00 $1,022.31 0.55% $2.79 Class A 1,000.00 1,021.16 0.78% 3.95 Class S 1,000.00 1,020.16 0.98% 4.96 * Expenses are equal to the Fund's annualized expense ratio multiplied by the average account value over the period, multiplied by 183/365 (to reflect one-half year period). CNI CHARTER FUNDS | PAGE 84 approval of investment advisory agreements (UNAUDITED) - -------------------------------------------------------------------------------- The Board of Trustees of CNI Charter Funds (the "Trust") is comprised of four Trustees, all of whom are independent of the Trust's investment advisers and sub-advisers. During the six months ended September 30, 2006, the Board of Trustees approved new sub-advisory agreements (the "Agreements") between CCM Advisors, LLC ("CCMA") and each of AMBS Investment Counsel, LLC ("AMBS") and SKBA Capital Management, LLC ("SKBA") with respect to portions of the AHA Diversified Equity Fund (the "Fund"). The following information summarizes the Board's considerations associated with its approval of each of the Agreements. In connection with their deliberations, the Board considered such information and factors as they believed, in light of the legal advice furnished to them and their own business judgment, to be relevant. Each Agreement was considered separately. As described below, the Board considered the nature, quality and extent of the various investment advisory services to be performed by AMBS and SKBA. In considering these matters, the Board discussed the approval of the Agreements with management and in private sessions with counsel at which no representatives of CCMA, AMBS or SKBA were present. The Board reviewed extensive materials regarding AMBS' and SKBA's investment results, advisory fee comparisons, financial and profitability information with respect to each entity, descriptions of various functions such as compliance monitoring and portfolio trading practices, and information about the personnel providing investment management and administrative services to the Fund. In deciding to approve each Agreement, the Board did not identify a single factor as controlling and this summary does not describe all of the matters considered. However, the Board concluded that each of the various factors referred to below favored such approval. NATURE, EXTENT AND QUALITY OF SERVICES In connection with its review of the proposed AMBS and SKBA sub-advisory agreements, the Board considered a variety of matters including the background, education and experience of the proposed sub-advisers' key portfolio management and operational personnel; their overall financial strength and stability; their regulatory compliance systems and procedures; their resources and ability to retain, attract and motivate capable personnel to serve the Fund; and the overall general quality and depth of their organizations. The Board also reviewed the proposed sub-advisers' investment philosophies and processes as well as their brokerage, trading and soft dollar practices. The Board noted that AMBS had not previously provided investment advisory services to mutual funds, but concluded that providing sub-advisory services to the Fund would not involve operational difficulties with which AMBS could not successfully cope. The Board noted that it was familiar with SKBA's performance as a result of its services as sub-adviser to the AHA Socially Responsible Fund series of the Trust. INVESTMENT PERFORMANCE The Board reviewed information regarding the historical performance of AMBS' separate accounts, noting that the performance of AMBS' large cap value product was in the top quartile of performance of investment advisers in the PSN Large Cap Value Universe (published by Informa Investment Solutions, Inc., a third-party supplier of investment manager separate account database information) for the three- and five-year periods ended March 31, 2006, and that it had significantly outperformed the Russell 1000 Value Index, which is the benchmark for the portion of the Fund proposed to be allocated to AMBS, for those periods. The Board also reviewed information regarding the historical performance of SKBA's separate accounts, noting that the performance of SKBA's large cap value product was in the top quartile of performance of investment advisers in the PSN Large Cap Value Universe for the three- and five-year periods ended March 31, 2006, and that it had significantly outperformed the Russell 1000 Value Index, which is the benchmark for the portion of the Fund proposed to be allocated to SKBA, for those periods. The Board also reviewed information regarding the process by which CCMA selected AMBS and SKBA from an initial field of over 300 large cap value investment advisers, including performance and risk factor information for nine semi-finalists in the search. In addition, the Board considered information presented by CCMA indicating the hypothetical performance of a model portfolio consisting of portions managed by AMBS, SKBA and Freeman Associates Investment Management LLC ("Freeman"), the sub-adviser to the remaining portion of the Fund. The model portfolio was based CNI CHARTER FUNDS | PAGE 85 approval of investment advisory agreements (UNAUDITED) (CONCLUDED) - -------------------------------------------------------------------------------- on Freeman's actual performance in advising a portion of the Fund and historical performance composites of separate accounts managed by AMBS and SKBA using substantially similar investment objectives, policies and strategies as those it proposed to use in managing portions of the Fund. The Board noted that the hypothetical performance of this combination of managers outperformed the Fund's benchmark for the most quarters, during the three- and five-year time periods reviewed. The Board further noted that this hypothetical performance was better than the performance of five other model portfolios, each of which consisted of portions managed by Freeman and one of the five finalists in the search (including model portfolios with portions managed by Freeman and SKBA, and by Freeman and AMBS). ADVISORY FEES AND FUND EXPENSES The Board also reviewed information regarding the advisory fees proposed to be charged under the AMBS and SKBA sub-advisory agreements, noting that AMBS and SKBA would be charging the same fees as those currently charged by the existing sub-adviser to the portion of the Fund to be managed by AMBS and SKBA, and that such fees are lower than AMBS' and SKBA's standard fee schedules for institutional clients. The Board noted that CCMA pays the Fund's sub-advisory fees out of CCMA's advisory fee, and that the Fund's asset levels were not so substantial that they could lead to significant economies of scale. The Board also considered information prepared by AMBS relating to its projected costs and profits with respect to the Fund. They noted that SKBA was unable to provide an estimation of the profitability of its proposed relationship with the Fund. However, the Board determined that such profitability was likely to be reasonable based on the low fee rate proposed to be charged by SKBA to CCMA with respect to the Fund. The Board recognized that AMBS and SKBA would not receive benefits other than investment advisory fees as a result of their relationships with the Fund, except the intangible benefits of any favorable publicity arising in connection with the Fund's performance. The Board noted, however, that City National Bank and City National Securities, Inc., which are affiliates of AMBS and SKBA, receive benefits in the form of fees paid for providing certain shareholder servicing and sub-distribution services to the Trust. CONCLUSIONS Based on its review, including its consideration of each of the factors referred to above, the Board concluded that each of the proposed AMBS and SKBA sub-advisory agreements represents fair and reasonable compensation in light of the nature and quality of the services to be provided by AMBS and SKBA, respectively, to the Fund and its shareholders, and that approval of each sub-advisory agreement is in the best interest of both the Fund and its shareholders. SHAREHOLDER APPROVAL Because AMBS and SKBA are affiliated with CCMA, they are not covered under an exemption order issued to the Trust by the Securities and Exchange Commission which permits the Trust's advisers to hire and terminate sub-advisers without shareholder approval. Upon the Board's approval of the appointments of AMBS and SKBA, the officers of the Trust called a meeting of Fund shareholders on September 25, 2006, at which time the shareholders of the Fund approved the appointments of AMBS and SKBA. CNI CHARTER FUNDS | PAGE 86 notes - -------------------------------------------------------------------------------- notes - -------------------------------------------------------------------------------- - -------------------------------------------------------------------------------- THANK YOU for your investment with CNI Charter Funds. We value the trust you have placed in us to help you achieve your financial goals. - -------------------------------------------------------------------------------- For more information on CNI Charter Funds, including charges and expenses, please call 1-888-889-0799 for a free prospectus. Read it carefully before you invest or send money. CNI CHARTER FUNDS(SM) [LOGO OMITTED](R) CNI-AR-001-0500 ITEM 2. CODE OF ETHICS. The registrant has adopted a code of ethics that applies to the registrant's principal executive officer, principal financial officer and principal accounting officer. ITEM 3. AUDIT COMMITTEE FINANCIAL EXPERT. (a)(1) The registrant's board of trustees has determined that the registrant has at least one audit committee financial expert serving on the audit committee. (a)(2) The audit committee financial experts are William R. Sweet and James R. Wolford. Messrs. Sweet and Wolford are independent as defined in Form N-CSR Item 3(a)(2). ITEM 4. PRINCIPAL ACCOUNTANT FEES AND SERVICES. Fees billed by KPMG LLP Related to the Trust KPMG LLP billed the Trust aggregate fees for services rendered to the Trust for the last two fiscal years as follows: - ------------------ ----------------------------------------------------- ----------------------------------------------------- 2006 2005 - ------------------ ----------------------------------------------------- ----------------------------------------------------- All fees and All fees and All other fees All fees and All fees and All other fees services to the services to and services to services to the services to and services to Trust that were service service Trust that were service service pre-approved affiliates that affiliates that pre-approved affiliates that affiliates that were did not require were did not require pre-approved pre-approval pre-approved pre-approval - ------- ---------- ----------------- ----------------- ----------------- ----------------- ----------------- ------------------ (a) Audit $285,500 N/A N/A $221,500 N/A N/A Fees(1) - ------- ---------- ----------------- ----------------- ----------------- ----------------- ----------------- ------------------ (b) Audit- $0 N/A N/A $0 N/A N/A Related Fees - ------- ---------- ----------------- ----------------- ----------------- ----------------- ----------------- ------------------ (c) Tax $60,000 N/A N/A $41,000 N/A N/A Fees - ------- ---------- ----------------- ----------------- ----------------- ----------------- ----------------- ------------------ (d) All N/A N/A N/A N/A N/A N/A Other Fees - ------- ---------- ----------------- ----------------- ----------------- ----------------- ----------------- ------------------ Notes: (1) Audit fees include amounts related to the audit of the registrant's annual financial statements and services normally provided by the accountant in connection with statutory and regulatory filings. (e)(1) Not Applicable (e)(2) Percentage of fees billed applicable to non-audit services pursuant to waiver of pre-approval requirement were as follows: ---------------------------- ----------------- ---------------- 2006 2005 ---------------------------- ----------------- ---------------- Audit-Related Fees N/A N/A ---------------------------- ----------------- ---------------- Tax Fees N/A N/A ---------------------------- ----------------- ---------------- All Other Fees N/A N/A ---------------------------- ----------------- ---------------- (f) Not Applicable (g) The aggregate non-audit fees and services billed by KPMG LLP for the last two fiscal years were $60,000 and $41,000 for 2006 and 2005, respectively. (h) Not Applicable ITEM 5. AUDIT COMMITTEE OF LISTED REGISTRANTS. Not applicable to open-end management investment companies. ITEM 6. SCHEDULE OF INVESTMENTS Not applicable. ITEM 7. DISCLOSURE OF PROXY VOTING POLICIES AND PROCEDURES FOR CLOSED-END MANAGEMENT INVESTMENT COMPANIES. Not applicable to open-end management investment companies. ITEM 8. PORTFOLIO MANAGERS OF CLOSED-END MANAGEMENT INVESTMENT COMPANIES Not applicable. Effective for closed-end management investment companies for fiscal years ending on or after December 31, 2005 ITEM 9. PURCHASES OF EQUITY SECURITIES BY CLOSED-END MANAGEMENT COMPANY AND AFFILIATED PURCHASERS. Not applicable to open-end management investment companies. ITEM 10. SUBMISSION OF MATTERS TO A VOTE OF SECURITY HOLDERS. CNI Charter Funds (the "Fund") has adopted the following procedures by which shareholders may recommend nominees to the Fund's Board of Trustees. The Fund has a Nominating Committee comprised solely of persons who are not considered "interested persons" of the Fund within the meaning of the Investment Company Act of 1940. The Committee periodically reviews such issues as the Board's composition, responsibilities, committees, compensation and other relevant issues, and recommends any appropriate changes to the full Board of Trustees. While the Committee normally is able to identify from its own resources an ample number of qualified candidates, it will consider shareholder suggestions of persons to be considered as nominees to fill future vacancies on the Board, so long as the shareholder or shareholder group submitting a proposed nominee: (a) beneficially owns more than 5% of the Fund's voting shares and has held such shares continuously for two years, and (b) is not an adverse holder. No eligible shareholder or shareholder group may submit more than one independent Board member nominee each year. Such suggestions must be sent in writing to the Fund 's Secretary, and must be accompanied by the shareholder's contact information, the nominee's contact information and number of Fund shares owned by the nominee, all information regarding the nominee that would be required to be disclosed in solicitations of proxies for elections of directors required under the Securities Exchange Act of 1934, and a notarized letter from the nominee stating his or her intention to serve as a nominee and be named in the Fund's proxy statement, if so designated by the Committee and the Board of Trustees. ITEM 11. CONTROLS AND PROCEDURES. (a) The certifying officers, whose certifications are included herewith, have evaluated the registrant's disclosure controls and procedures within 90 days of the filing date of this report. In their opinion, based on their evaluation, the registrant's disclosure controls and procedures are adequately designed, and are operating effectively to ensure, that information required to be disclosed by the registrant in the reports it files or submits under the Securities Exchange Act of 1934 is recorded, processed, summarized and reported within the time periods specified in the Securities and Exchange Commission's rules and forms. (b) There were no significant changes in the registrant's internal control over financial reporting that occurred during the registrant's last fiscal half-year that has materially affected, or is reasonably likely to materially affect, the registrant's internal control over financial reporting. ITEMS 12. EXHIBITS. (a)(1) Code of Ethics attached hereto. (a)(2) A separate certification for the principal executive officer and the principal financial officer of the registrant as required by Rule 30a-2(a) under the Investment Company Act of 1940, as amended (17 CFR 270.30a-2(a)), are filed herewith. (b) Officer certifications as required by Rule 30a-2(b) under the Investment Company Act of 1940, as amended (17 CFR 270.30a-2(b)) also accompany this filing as an Exhibit. - -------------------------------------------------------------------------------- SIGNATURES Pursuant to the requirements of the securities Exchange Act of 1934 and the Investment Company Act of 1940, the registrant has duly caused this report to be signed on its behalf by the undersigned, thereunto duly authorized. (Registrant) CNI Charter Funds By (Signature and Title)* /s/ Vern Kozlen --------------------------------------- Vern Kozlen, President & CEO Date November 27, 2006 Pursuant to the requirements of the Securities Exchange Act of 1934 and the Investment Company Act of 1940, this report has been signed below by the following persons on behalf of the registrant and in the capacities and on the dates indicated. By (Signature and Title)* /s/ Vern Kozlen --------------------------------------- Vern Kozlen, President & CEO Date November 27, 2006 By (Signature and Title)* /s/ Eric Kleinschmidt --------------------------------------- Eric Kleinschmidt, Controller and COO Date November 27, 2006 * Print the name and title of each signing officer under his or her signature.