Urologix (ULGX) 10-K 2008 FY Annual report

EXHIBIT 32

CERTIFICATION

The undersigned certifies pursuant to 18 U.S.C. §1350, that:

(1) The accompanying Annual Report on Form 10-K for the period ended June 30, 2008, fully complies with the requirements of Section 13(a) or 15(d) of the Securities Exchange Act of 1934; and

(2) The information contained in the accompanying Report fairly presents, in all material respects, the financial condition and results of operations of the Company.

Date: September 29, 2008

/s/    STRYKER WARREN, JR.        

Stryker Warren, Jr.

Chief Executive Officer

(Principal executive officer)

/s/    REBECCA J. WEBER        

Rebecca J. Weber

Controller and Director of Finance

(Principal financial officer and principal accounting officer)