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| Directions to the 2009 Annual Meeting of Stockholders of Cubist Pharmaceuticals, Inc. Here’s how to order a copy of the proxy materials and select a future delivery preference: Paper copies: Current and future paper delivery requests can be submitted via the telephone, Internet or email options below. Email copies: Current and future email delivery requests must be submitted via the Internet following the instructions below. If you request an email copy of current materials you will receive an email with a link to the materials. PLEASE NOTE: You must use the numbers in the shaded bar on the reverse side when requesting a set of proxy materials. Internet – Go to www.envisionreports.com/CBST. Click Cast Your Vote or Request Materials. Follow the instructions to log in and order a paper or email copy of the current meeting materials and submit your preference for email or paper delivery of future meeting materials. Telephone – Call us free of charge at 1-866-641-4276 using a touch-tone phone and follow the instructions to log in and order a paper copy of the materials by mail for the current meeting. You can also submit a preference to receive a paper copy for future meetings. Email – Send email to investorvote@computershare.com with “Proxy Materials Cubist” in the subject line. Include in the message your full name and address, plus the three numbers located in the shaded bar on the reverse, and state in the email that you want a paper copy of current meeting materials. You can also state your preference to receive a paper copy for future meetings. To facilitate timely delivery, all requests for a paper copy of the proxy materials must be received by May 25, 2009. To obtain directions to attend the 2009 Annual Meeting of Stockholders and vote in person, please visit www.cubist.com. Notice of Internet Availability of Proxy Materials The 2009 Annual Meeting of Stockholders of Cubist Pharmaceuticals, Inc. will be held on June 4, 2009 at 55 Hayden Avenue, Lexington, MA 02421, at 8:30 a.m. Eastern Time. Proposals to be voted on at the meeting are listed below along with the Board of Directors’ recommendations. The Board of Directors recommends that you vote FOR all the nominees listed and FOR Proposals 2, 3 and 4: 1. Election of the Class I Directors: 01 - Kenneth Bate, 02 - Nancy Hutson, 03 - Martin Soeters. 2. A proposal to amend our Amended and Restated 1997 Employee Stock Purchase Plan, or ESPP, to increase the number of shares issuable under the ESPP by 500,000. 3. A proposal to amend our Amended and Restated 2002 Directors’ Equity Incentive Plan, or Directors’ Plan, to extend the term of the Directors’ Plan by three years and to increase the number of shares issuable under the Directors’ Plan by 400,000. 4. A proposal to ratify the selection of PricewaterhouseCoopers LLP as our independent registered public accounting firm for the fiscal year ending December 31, 2009. PLEASE NOTE – YOU CANNOT VOTE BY RETURNING THIS NOTICE. To vote your shares you must vote online or request a paper copy of the proxy materials to receive a proxy card. 011SGA |